Miyakogusa Predicted Gene

Lj1g3v3729250.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3729250.1 Non Chatacterized Hit- tr|I3T9F5|I3T9F5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,44.83,3e-19,UBIQUITIN_2,Ubiquitin supergroup; Ubiquitin-like,NULL;
seg,NULL; UBQ6 (UBIQUITIN 6), PROTEIN BINDING,CUFF.31126.1
         (142 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14360.1 | Symbols:  | Ubiquitin-like superfamily protein | c...   145   1e-35
AT5G40630.1 | Symbols:  | Ubiquitin-like superfamily protein | c...   131   2e-31
AT5G62100.1 | Symbols: ATBAG2, BAG2 | BCL-2-associated athanogen...    80   6e-16
AT5G62100.3 | Symbols: ATBAG2, BAG2 | BCL-2-associated athanogen...    80   6e-16
AT5G62100.2 | Symbols: ATBAG2, BAG2 | BCL-2-associated athanogen...    80   7e-16
AT3G51780.1 | Symbols: ATBAG4, BAG4 | BCL-2-associated athanogen...    79   1e-15
AT5G52060.1 | Symbols: ATBAG1, BAG1 | BCL-2-associated athanogen...    78   2e-15
AT5G07220.1 | Symbols: ATBAG3, BAG3 | BCL-2-associated athanogen...    74   5e-14

>AT5G14360.1 | Symbols:  | Ubiquitin-like superfamily protein |
           chr5:4631038-4631641 FORWARD LENGTH=163
          Length = 163

 Score =  145 bits (365), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 70/103 (67%), Positives = 87/103 (84%), Gaps = 3/103 (2%)

Query: 37  ETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSESHDISIEATSTFGELKMILSLVT 96
           E KWE+RPGGMLVQKR+ S    G+ +I+I VST +  HD+SIEATSTFGELKM+LSL+T
Sbjct: 46  EIKWELRPGGMLVQKRQES---IGEDLISIRVSTFAHFHDLSIEATSTFGELKMVLSLLT 102

Query: 97  SLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKE 139
            LEP++QRL+FKGKER++ EYLHMVGV +KDKVLLL+DP  K+
Sbjct: 103 GLEPKQQRLVFKGKEREDHEYLHMVGVGDKDKVLLLEDPGFKD 145


>AT5G40630.1 | Symbols:  | Ubiquitin-like superfamily protein |
           chr5:16271402-16272429 REVERSE LENGTH=165
          Length = 165

 Score =  131 bits (329), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 64/109 (58%), Positives = 90/109 (82%), Gaps = 3/109 (2%)

Query: 34  SNSETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSE-SHDISIEATSTFGELKMIL 92
           +N+  KWE+RPGGMLVQKR  S   + + +I++ VSTVS+ S++ISI+A STFGELKM++
Sbjct: 51  NNNNIKWEMRPGGMLVQKR--SEDSNTEDLISLRVSTVSQLSYEISIDANSTFGELKMMI 108

Query: 93  SLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELR 141
           ++V+ +E +EQRLLF+GKER++ EYLHM+GV + DKV LL+DPA KEL+
Sbjct: 109 AIVSGIEAKEQRLLFRGKEREDREYLHMIGVGDGDKVFLLQDPAFKELK 157


>AT5G62100.1 | Symbols: ATBAG2, BAG2 | BCL-2-associated athanogene 2
           | chr5:24940477-24941775 FORWARD LENGTH=296
          Length = 296

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 68/102 (66%), Gaps = 1/102 (0%)

Query: 41  EIRPGGMLVQKREISNQISGDGMITIIVSTVSESHDISIEATSTFGELKMILSLVTSLEP 100
           E+RPGGM+VQKR   +     G I + V   S  H+ISI + STFGELK ILS  T +  
Sbjct: 17  ELRPGGMVVQKRTDHSSSVPRG-IRVRVKYGSVHHEISINSQSTFGELKKILSGATGVHH 75

Query: 101 REQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV 142
           ++ ++++K KERD+  +L + GV+++ K++L++DP  +E R+
Sbjct: 76  QDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRL 117


>AT5G62100.3 | Symbols: ATBAG2, BAG2 | BCL-2-associated athanogene 2
           | chr5:24940477-24941528 FORWARD LENGTH=200
          Length = 200

 Score = 79.7 bits (195), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 72/109 (66%), Gaps = 1/109 (0%)

Query: 34  SNSETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSESHDISIEATSTFGELKMILS 93
           ++ + + E+RPGGM+VQKR   +     G I + V   S  H+ISI + STFGELK ILS
Sbjct: 10  TSGDGEMELRPGGMVVQKRTDHSSSVPRG-IRVRVKYGSVHHEISINSQSTFGELKKILS 68

Query: 94  LVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV 142
             T +  ++ ++++K KERD+  +L + GV+++ K++L++DP  +E R+
Sbjct: 69  GATGVHHQDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRL 117


>AT5G62100.2 | Symbols: ATBAG2, BAG2 | BCL-2-associated athanogene 2
           | chr5:24940477-24941775 FORWARD LENGTH=285
          Length = 285

 Score = 79.7 bits (195), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 68/102 (66%), Gaps = 1/102 (0%)

Query: 41  EIRPGGMLVQKREISNQISGDGMITIIVSTVSESHDISIEATSTFGELKMILSLVTSLEP 100
           E+RPGGM+VQKR   +     G I + V   S  H+ISI + STFGELK ILS  T +  
Sbjct: 17  ELRPGGMVVQKRTDHSSSVPRG-IRVRVKYGSVHHEISINSQSTFGELKKILSGATGVHH 75

Query: 101 REQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV 142
           ++ ++++K KERD+  +L + GV+++ K++L++DP  +E R+
Sbjct: 76  QDMQIIYKDKERDSKMFLDLSGVKDRSKLILIEDPISQEKRL 117


>AT3G51780.1 | Symbols: ATBAG4, BAG4 | BCL-2-associated athanogene 4
           | chr3:19207029-19208178 REVERSE LENGTH=269
          Length = 269

 Score = 78.6 bits (192), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/112 (38%), Positives = 63/112 (56%), Gaps = 13/112 (11%)

Query: 34  SNSETKWEIRPGGMLVQKREI-------------SNQISGDGMITIIVSTVSESHDISIE 80
           S  E++WE+RPGGMLVQ+R+              S   +    I I VS  S  HD+ I 
Sbjct: 5   STEESEWEVRPGGMLVQRRDDAASSDHKPLQDPDSASAAFAQTIRITVSHGSSHHDLHIS 64

Query: 81  ATSTFGELKMILSLVTSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLL 132
           A +TFG++K  L   T LE  E ++LF+G ERD+ E L   GV++  K++++
Sbjct: 65  AHATFGDVKKALVQKTGLEASELKILFRGVERDDAEQLQAAGVKDASKLVVV 116


>AT5G52060.1 | Symbols: ATBAG1, BAG1 | BCL-2-associated athanogene 1
           | chr5:21152449-21153741 REVERSE LENGTH=342
          Length = 342

 Score = 77.8 bits (190), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 42/105 (40%), Positives = 67/105 (63%), Gaps = 3/105 (2%)

Query: 41  EIRPGGMLVQKREISNQISGDG---MITIIVSTVSESHDISIEATSTFGELKMILSLVTS 97
           EIRPGGMLVQKR       G     MI + +   +  H+I+I   ++FGELK +L+  T 
Sbjct: 41  EIRPGGMLVQKRNPDLDPVGPPPPPMIRVRIKYGAVYHEINISPQASFGELKKMLTGPTG 100

Query: 98  LEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV 142
           +  ++Q+L++K KERD+  +L + GV++K K++L++DP  +E R 
Sbjct: 101 IHHQDQKLMYKDKERDSKAFLDVSGVKDKSKMVLIEDPLSQEKRF 145


>AT5G07220.1 | Symbols: ATBAG3, BAG3 | BCL-2-associated athanogene 3
           | chr5:2265545-2266720 REVERSE LENGTH=303
          Length = 303

 Score = 73.6 bits (179), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/107 (37%), Positives = 66/107 (61%), Gaps = 1/107 (0%)

Query: 36  SETKWEIRPGGMLVQKREISNQISGDGMITIIVSTVSESHDISIEATSTFGELKMILSLV 95
           S  +WE RPGGM+VQ+R   N      +  + V   S  H+I+I + S+FGELK +LS  
Sbjct: 18  SGNEWESRPGGMVVQRRTDQNS-DVPRVFRVRVKYGSVYHEININSQSSFGELKKMLSDQ 76

Query: 96  TSLEPREQRLLFKGKERDNDEYLHMVGVRNKDKVLLLKDPALKELRV 142
             L   + ++L+K KERD+  +L + GV+++ K+++ +DP  +E R+
Sbjct: 77  VGLHHEDMKVLYKDKERDSKMFLDLCGVKDRSKLVVKEDPISQEKRL 123