Miyakogusa Predicted Gene

Lj1g3v3716950.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3716950.1 tr|G7K6H8|G7K6H8_MEDTR Exportin-1 OS=Medicago
truncatula GN=MTR_5g007790 PE=4 SV=1,91.24,0,EXPORTIN 1 (CHROMOSOME
REGION MAINTENANCE PROTEIN 1),NULL; EXPORTIN 1/5,NULL; CRM1 C
terminal,CRM1 C,CUFF.31112.1
         (350 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G17020.1 | Symbols: XPO1A, ATCRM1, ATXPO1, XPO1, HIT2 | expor...   600   e-172
AT5G17020.2 | Symbols: XPO1A | exportin 1A | chr5:5594904-560246...   600   e-172
AT3G03110.1 | Symbols: XPO1B, CRM1B | exportin 1B | chr3:708966-...   584   e-167

>AT5G17020.1 | Symbols: XPO1A, ATCRM1, ATXPO1, XPO1, HIT2 | exportin
           1A | chr5:5594904-5602467 FORWARD LENGTH=1075
          Length = 1075

 Score =  600 bits (1548), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 286/330 (86%), Positives = 306/330 (92%)

Query: 10  IVVSVGRYVVGQYPRFLRAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIVQKCKRK 69
           ++ S   YVVGQYPRFLRAHWKFLKTVVNKLFEFMHE+HPGVQDMACDTFLKIVQKCKRK
Sbjct: 542 VIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRK 601

Query: 70  FVITQLGENEPFVSELLSGLSTTIVDLEPHQIHTFYESVGSMVQAESDSQKRDEYLQRLM 129
           FVI Q+GENEPFVSELL+GL+TT+ DLEPHQIH+FYESVG+M+QAESD QKRDEYLQRLM
Sbjct: 602 FVIVQVGENEPFVSELLTGLATTVQDLEPHQIHSFYESVGNMIQAESDPQKRDEYLQRLM 661

Query: 130 HLPNQKWLEIIGQARQNVDFLKDHDVIRTVLNILQTNTSVASSLGTYFLPQISLIFLDML 189
            LPNQKW EIIGQAR +V+FLKD  VIRTVLNILQTNTS A+SLGTYFL QISLIFLDML
Sbjct: 662 ALPNQKWAEIIGQARHSVEFLKDQVVIRTVLNILQTNTSAATSLGTYFLSQISLIFLDML 721

Query: 190 NVYRMYSELISKSIAEGGPYASRTSFVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 249
           NVYRMYSEL+S +I EGGPYAS+TSFVKLLRSVKRETLKLIETFLDKAEDQP IGKQFVP
Sbjct: 722 NVYRMYSELVSTNITEGGPYASKTSFVKLLRSVKRETLKLIETFLDKAEDQPHIGKQFVP 781

Query: 250 PMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMVEDVPRIFEAVFQCTLEMITKNF 309
           PMM+ VLGDYARNVPDARESEVLSLFATI+NKYKA M++DVP IFEAVFQCTLEMITKNF
Sbjct: 782 PMMESVLGDYARNVPDARESEVLSLFATIINKYKATMLDDVPHIFEAVFQCTLEMITKNF 841

Query: 310 EDYPEHRLKFFSLLCAIATHCFHALICLSS 339
           EDYPEHRLKFFSLL AIAT CF ALI LSS
Sbjct: 842 EDYPEHRLKFFSLLRAIATFCFPALIKLSS 871


>AT5G17020.2 | Symbols: XPO1A | exportin 1A | chr5:5594904-5602467
           FORWARD LENGTH=1060
          Length = 1060

 Score =  600 bits (1547), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 286/330 (86%), Positives = 306/330 (92%)

Query: 10  IVVSVGRYVVGQYPRFLRAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIVQKCKRK 69
           ++ S   YVVGQYPRFLRAHWKFLKTVVNKLFEFMHE+HPGVQDMACDTFLKIVQKCKRK
Sbjct: 527 VIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKRK 586

Query: 70  FVITQLGENEPFVSELLSGLSTTIVDLEPHQIHTFYESVGSMVQAESDSQKRDEYLQRLM 129
           FVI Q+GENEPFVSELL+GL+TT+ DLEPHQIH+FYESVG+M+QAESD QKRDEYLQRLM
Sbjct: 587 FVIVQVGENEPFVSELLTGLATTVQDLEPHQIHSFYESVGNMIQAESDPQKRDEYLQRLM 646

Query: 130 HLPNQKWLEIIGQARQNVDFLKDHDVIRTVLNILQTNTSVASSLGTYFLPQISLIFLDML 189
            LPNQKW EIIGQAR +V+FLKD  VIRTVLNILQTNTS A+SLGTYFL QISLIFLDML
Sbjct: 647 ALPNQKWAEIIGQARHSVEFLKDQVVIRTVLNILQTNTSAATSLGTYFLSQISLIFLDML 706

Query: 190 NVYRMYSELISKSIAEGGPYASRTSFVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 249
           NVYRMYSEL+S +I EGGPYAS+TSFVKLLRSVKRETLKLIETFLDKAEDQP IGKQFVP
Sbjct: 707 NVYRMYSELVSTNITEGGPYASKTSFVKLLRSVKRETLKLIETFLDKAEDQPHIGKQFVP 766

Query: 250 PMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMVEDVPRIFEAVFQCTLEMITKNF 309
           PMM+ VLGDYARNVPDARESEVLSLFATI+NKYKA M++DVP IFEAVFQCTLEMITKNF
Sbjct: 767 PMMESVLGDYARNVPDARESEVLSLFATIINKYKATMLDDVPHIFEAVFQCTLEMITKNF 826

Query: 310 EDYPEHRLKFFSLLCAIATHCFHALICLSS 339
           EDYPEHRLKFFSLL AIAT CF ALI LSS
Sbjct: 827 EDYPEHRLKFFSLLRAIATFCFPALIKLSS 856


>AT3G03110.1 | Symbols: XPO1B, CRM1B | exportin 1B |
           chr3:708966-716879 FORWARD LENGTH=1076
          Length = 1076

 Score =  584 bits (1505), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 280/331 (84%), Positives = 300/331 (90%)

Query: 10  IVVSVGRYVVGQYPRFLRAHWKFLKTVVNKLFEFMHESHPGVQDMACDTFLKIVQKCKRK 69
           ++ S   YVVGQY RFLRAHWKFLKTVV+KLFEFMHE+HPGVQDMACDTFLKIVQKCKRK
Sbjct: 543 VIASNIMYVVGQYSRFLRAHWKFLKTVVHKLFEFMHETHPGVQDMACDTFLKIVQKCKRK 602

Query: 70  FVITQLGENEPFVSELLSGLSTTIVDLEPHQIHTFYESVGSMVQAESDSQKRDEYLQRLM 129
           FVI Q+GE+EPFVSELLSGL+T + DL+PHQIHTFYESVGSM+QAESD QKR EYLQRLM
Sbjct: 603 FVIVQVGESEPFVSELLSGLATIVGDLQPHQIHTFYESVGSMIQAESDPQKRGEYLQRLM 662

Query: 130 HLPNQKWLEIIGQARQNVDFLKDHDVIRTVLNILQTNTSVASSLGTYFLPQISLIFLDML 189
            LPNQKW EIIGQARQ+ D LK+ DVIRTVLNILQTNT VA+SLGT+FL QISLIFLDML
Sbjct: 663 ALPNQKWAEIIGQARQSADILKEPDVIRTVLNILQTNTRVATSLGTFFLSQISLIFLDML 722

Query: 190 NVYRMYSELISKSIAEGGPYASRTSFVKLLRSVKRETLKLIETFLDKAEDQPQIGKQFVP 249
           NVYRMYSEL+S SIA GGPYASRTS VKLLRSVKRE LKLIETFLDKAE+QP IGKQFVP
Sbjct: 723 NVYRMYSELVSSSIANGGPYASRTSLVKLLRSVKREILKLIETFLDKAENQPHIGKQFVP 782

Query: 250 PMMDPVLGDYARNVPDARESEVLSLFATIVNKYKAAMVEDVPRIFEAVFQCTLEMITKNF 309
           PMMD VLGDYARNVPDARESEVLSLFATI+NKYK  M ++VP IFEAVFQCTLEMITKNF
Sbjct: 783 PMMDQVLGDYARNVPDARESEVLSLFATIINKYKVVMRDEVPLIFEAVFQCTLEMITKNF 842

Query: 310 EDYPEHRLKFFSLLCAIATHCFHALICLSSQ 340
           EDYPEHRLKFFSLL AIAT CF ALI LSS+
Sbjct: 843 EDYPEHRLKFFSLLRAIATFCFRALIQLSSE 873