Miyakogusa Predicted Gene

Lj1g3v3716220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3716220.1 Non Chatacterized Hit- tr|I1GHV2|I1GHV2_AMPQE
Uncharacterized protein OS=Amphimedon queenslandica
GN,38.95,0.00000000000003,PARG_cat,Poly(ADP-ribose) glycohydrolase;
POLY(ADP-RIBOSE) GLYCOHYDROLASE,Poly(ADP-ribose)
glycohydr,gene.g35237.t1.1
         (134 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G31870.2 | Symbols: TEJ | Poly (ADP-ribose) glycohydrolase (P...   150   2e-37
AT2G31870.1 | Symbols: TEJ | Poly (ADP-ribose) glycohydrolase (P...   150   2e-37
AT2G31865.2 | Symbols: PARG2 | poly(ADP-ribose) glycohydrolase 2...   115   1e-26
AT2G31865.1 | Symbols: PARG2 | poly(ADP-ribose) glycohydrolase 2...   114   1e-26

>AT2G31870.2 | Symbols: TEJ | Poly (ADP-ribose) glycohydrolase
           (PARG) | chr2:13549999-13553756 REVERSE LENGTH=547
          Length = 547

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 87/122 (71%)

Query: 1   METSEGKCSNHEIRDSQNDYHRMEQCNNIGVATGNWGCGAFGGDPEVKTIIQWLAASQAL 60
           +E +  K +N+ IRD   +    E   + GVATGNWGCG FGGDPE+K  IQWLAASQ  
Sbjct: 416 VEMNREKPANNLIRDFYVEGVDNEDHEDDGVATGNWGCGVFGGDPELKATIQWLAASQTR 475

Query: 61  RPFIAYYRFRLEALHNIDKVAHWILSHRWTVGDLWNMLTEYSMNRSKGGTNVGFLQWVLP 120
           RPFI+YY F +EAL N+D+V  WILSH+WTVGDLWNM+ EYS  R    T+VGF  W+LP
Sbjct: 476 RPFISYYTFGVEALRNLDQVTKWILSHKWTVGDLWNMMLEYSAQRLYKQTSVGFFSWLLP 535

Query: 121 SM 122
           S+
Sbjct: 536 SL 537


>AT2G31870.1 | Symbols: TEJ | Poly (ADP-ribose) glycohydrolase
           (PARG) | chr2:13549999-13553756 REVERSE LENGTH=548
          Length = 548

 Score =  150 bits (380), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 71/122 (58%), Positives = 87/122 (71%)

Query: 1   METSEGKCSNHEIRDSQNDYHRMEQCNNIGVATGNWGCGAFGGDPEVKTIIQWLAASQAL 60
           +E +  K +N+ IRD   +    E   + GVATGNWGCG FGGDPE+K  IQWLAASQ  
Sbjct: 417 VEMNREKPANNLIRDFYVEGVDNEDHEDDGVATGNWGCGVFGGDPELKATIQWLAASQTR 476

Query: 61  RPFIAYYRFRLEALHNIDKVAHWILSHRWTVGDLWNMLTEYSMNRSKGGTNVGFLQWVLP 120
           RPFI+YY F +EAL N+D+V  WILSH+WTVGDLWNM+ EYS  R    T+VGF  W+LP
Sbjct: 477 RPFISYYTFGVEALRNLDQVTKWILSHKWTVGDLWNMMLEYSAQRLYKQTSVGFFSWLLP 536

Query: 121 SM 122
           S+
Sbjct: 537 SL 538


>AT2G31865.2 | Symbols: PARG2 | poly(ADP-ribose) glycohydrolase 2 |
           chr2:13546790-13549472 REVERSE LENGTH=532
          Length = 532

 Score =  115 bits (287), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 66/96 (68%)

Query: 27  NNIGVATGNWGCGAFGGDPEVKTIIQWLAASQALRPFIAYYRFRLEALHNIDKVAHWILS 86
             IGVATGNWGCG FGGDPE+K ++QWLA SQ+ RPF++YY F L+AL N+++V   +  
Sbjct: 435 KKIGVATGNWGCGVFGGDPELKIMLQWLAISQSGRPFMSYYTFGLQALQNLNQVIEMVAL 494

Query: 87  HRWTVGDLWNMLTEYSMNRSKGGTNVGFLQWVLPSM 122
              TVGDLW  L EYS  R    T +GF  W++ S+
Sbjct: 495 QEMTVGDLWKKLVEYSSERLSRRTWLGFFSWLMTSL 530


>AT2G31865.1 | Symbols: PARG2 | poly(ADP-ribose) glycohydrolase 2 |
           chr2:13546790-13549472 REVERSE LENGTH=522
          Length = 522

 Score =  114 bits (286), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 51/96 (53%), Positives = 66/96 (68%)

Query: 27  NNIGVATGNWGCGAFGGDPEVKTIIQWLAASQALRPFIAYYRFRLEALHNIDKVAHWILS 86
             IGVATGNWGCG FGGDPE+K ++QWLA SQ+ RPF++YY F L+AL N+++V   +  
Sbjct: 425 KKIGVATGNWGCGVFGGDPELKIMLQWLAISQSGRPFMSYYTFGLQALQNLNQVIEMVAL 484

Query: 87  HRWTVGDLWNMLTEYSMNRSKGGTNVGFLQWVLPSM 122
              TVGDLW  L EYS  R    T +GF  W++ S+
Sbjct: 485 QEMTVGDLWKKLVEYSSERLSRRTWLGFFSWLMTSL 520