Miyakogusa Predicted Gene

Lj1g3v3716210.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3716210.1 tr|A9U4J6|A9U4J6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_173637,32.08,2e-17,CoA-dependent
acyltransferases,NULL,CUFF.31104.1
         (191 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G52610.1 | Symbols:  | unknown protein; Has 68 Blast hits to ...   265   2e-71

>AT3G52610.1 | Symbols:  | unknown protein; Has 68 Blast hits to 67
           proteins in 21 species: Archae - 0; Bacteria - 11;
           Metazoa - 0; Fungi - 0; Plants - 55; Viruses - 0; Other
           Eukaryotes - 2 (source: NCBI BLink). |
           chr3:19510513-19512547 FORWARD LENGTH=475
          Length = 475

 Score =  265 bits (676), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 126/186 (67%), Positives = 151/186 (81%), Gaps = 2/186 (1%)

Query: 5   WTSKDLPEYQREKYAVVTLIDCRSILDPVLRSNQSGFYHSAILNTHDVCGE-PLWDLAKR 63
           ++SK+LP YQ EKYAVVTL DCRSIL+P L SN  GFYH+ IL+THD+ GE  LWDLAKR
Sbjct: 288 YSSKNLPPYQGEKYAVVTLSDCRSILEPPLTSNDFGFYHAGILHTHDLTGEEKLWDLAKR 347

Query: 64  SYTAYVDAMNSNKHFSDMNDLNFLMCKAIENPGLTPSSSLRTALISVFEDAVIDDSSKVH 123
            Y ++  + NSNK F+DM+DLNFLMCKAIENP LTPSSSLRTA IS+FED VID+S +  
Sbjct: 348 CYDSFTSSKNSNKQFTDMSDLNFLMCKAIENPNLTPSSSLRTAFISIFEDPVIDESPEPE 407

Query: 124 -EELGLEDYVGCASTHGVGPSVAIFDTVRNGKLDCACIYPSPLHSREQIQGLVDDMKRIL 182
              LG++DY+GCAS HGVGPSVA+FD +R+GKLDCA +YPSPLHSREQ+ GL+  MK IL
Sbjct: 408 LASLGVQDYIGCASIHGVGPSVAVFDALRDGKLDCAFVYPSPLHSREQMDGLIQHMKTIL 467

Query: 183 VEGCNS 188
           +EG  S
Sbjct: 468 LEGSAS 473