Miyakogusa Predicted Gene

Lj1g3v3690280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3690280.1 CUFF.31070.1
         (260 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G40570.1 | Symbols:  | Surfeit locus protein 2 (SURF2) | chr5...   164   7e-41
AT5G40570.2 | Symbols:  | Surfeit locus protein 2 (SURF2) | chr5...   157   9e-39
AT5G14440.2 | Symbols:  | Surfeit locus protein 2 (SURF2) | chr5...   156   1e-38
AT5G14440.1 | Symbols:  | Surfeit locus protein 2 (SURF2) | chr5...   156   1e-38

>AT5G40570.1 | Symbols:  | Surfeit locus protein 2 (SURF2) |
           chr5:16246798-16248251 FORWARD LENGTH=204
          Length = 204

 Score =  164 bits (414), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 76/107 (71%), Positives = 91/107 (85%)

Query: 10  KEGSNLLGSPTFTELENGRFKCVETGHEVLSKDIPSYSNSKKCRLGLIDFALSNHKPPLN 69
           KEG +L GSPTF +L NGR +CVETGHEVL+ D+ SY+ +K+CRLGLI+ ALS  KPPLN
Sbjct: 7   KEGKSLFGSPTFVDLGNGRLRCVETGHEVLAGDVESYARNKRCRLGLINHALSLGKPPLN 66

Query: 70  MFNQDPLYRSKLICKLTGDNVNKSEEHIWKHMSGKRFLNKLEQQEEG 116
           MF+Q PL RSKL+CKLTGD VNK+EEHIWKH++GKRFL+KLEQ E G
Sbjct: 67  MFSQCPLSRSKLVCKLTGDTVNKNEEHIWKHVNGKRFLHKLEQVERG 113


>AT5G40570.2 | Symbols:  | Surfeit locus protein 2 (SURF2) |
           chr5:16246798-16248251 FORWARD LENGTH=211
          Length = 211

 Score =  157 bits (396), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 76/114 (66%), Positives = 91/114 (79%), Gaps = 7/114 (6%)

Query: 10  KEGSNLLGSPTFTELENGRFKCVETGHEVLSKDIPSYSNSKKCRLGLIDFALSNHKPPLN 69
           KEG +L GSPTF +L NGR +CVETGHEVL+ D+ SY+ +K+CRLGLI+ ALS  KPPLN
Sbjct: 7   KEGKSLFGSPTFVDLGNGRLRCVETGHEVLAGDVESYARNKRCRLGLINHALSLGKPPLN 66

Query: 70  MFNQDPLYR-------SKLICKLTGDNVNKSEEHIWKHMSGKRFLNKLEQQEEG 116
           MF+Q PL R       SKL+CKLTGD VNK+EEHIWKH++GKRFL+KLEQ E G
Sbjct: 67  MFSQCPLSRIENGLKFSKLVCKLTGDTVNKNEEHIWKHVNGKRFLHKLEQVERG 120


>AT5G14440.2 | Symbols:  | Surfeit locus protein 2 (SURF2) |
           chr5:4656065-4657807 REVERSE LENGTH=291
          Length = 291

 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 83/97 (85%)

Query: 12  GSNLLGSPTFTELENGRFKCVETGHEVLSKDIPSYSNSKKCRLGLIDFALSNHKPPLNMF 71
           G++LLG P + +LENGRFKCV+TGHE+L KD   YS SK+CRLGLID+ALS+ KPPLN+F
Sbjct: 14  GADLLGKPKYKKLENGRFKCVQTGHELLEKDKKVYSQSKRCRLGLIDYALSHSKPPLNLF 73

Query: 72  NQDPLYRSKLICKLTGDNVNKSEEHIWKHMSGKRFLN 108
            QDP  RSKL CKLTGD VNK+EEHIWKH++G+RFLN
Sbjct: 74  EQDPNARSKLKCKLTGDTVNKTEEHIWKHITGRRFLN 110


>AT5G14440.1 | Symbols:  | Surfeit locus protein 2 (SURF2) |
           chr5:4656065-4657807 REVERSE LENGTH=292
          Length = 292

 Score =  156 bits (395), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 69/97 (71%), Positives = 83/97 (85%)

Query: 12  GSNLLGSPTFTELENGRFKCVETGHEVLSKDIPSYSNSKKCRLGLIDFALSNHKPPLNMF 71
           G++LLG P + +LENGRFKCV+TGHE+L KD   YS SK+CRLGLID+ALS+ KPPLN+F
Sbjct: 14  GADLLGKPKYKKLENGRFKCVQTGHELLEKDKKVYSQSKRCRLGLIDYALSHSKPPLNLF 73

Query: 72  NQDPLYRSKLICKLTGDNVNKSEEHIWKHMSGKRFLN 108
            QDP  RSKL CKLTGD VNK+EEHIWKH++G+RFLN
Sbjct: 74  EQDPNARSKLKCKLTGDTVNKTEEHIWKHITGRRFLN 110