Miyakogusa Predicted Gene

Lj1g3v3668840.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3668840.1 Non Chatacterized Hit- tr|I1KDD2|I1KDD2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.48912
PE,69.57,1e-18,seg,NULL; L domain-like,NULL; no
description,NULL,CUFF.31081.1
         (74 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G24230.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    72   6e-14
AT5G58150.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    52   6e-08
AT4G23740.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    48   1e-06
AT2G26730.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    47   4e-06

>AT2G24230.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr2:10301979-10304540 REVERSE LENGTH=853
          Length = 853

 Score = 72.4 bits (176), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 33/52 (63%), Positives = 41/52 (78%)

Query: 23  VLCDANKEHVVDLVLPGMGLSGSIPDNTIGKLSRIQNLDLSCNIITGLPSDF 74
           + CD+  EHV+ L+  GM LSG IPDNTIGKLS++Q+LDLS N I+ LPSDF
Sbjct: 60  LFCDSKNEHVIMLIASGMSLSGQIPDNTIGKLSKLQSLDLSNNKISALPSDF 111


>AT5G58150.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr5:23530216-23532573 REVERSE LENGTH=785
          Length = 785

 Score = 52.4 bits (124), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/46 (58%), Positives = 37/46 (80%), Gaps = 1/46 (2%)

Query: 23  VLCDANKEHVVDLVLPGMGLSGSIPDNTIGKLSRIQNLDLSCNIIT 68
           V+CD++ E+V+ +   G+ LSGSIPDNTIGK+S++Q LDLS N IT
Sbjct: 59  VVCDSS-ENVLHISASGLDLSGSIPDNTIGKMSKLQTLDLSGNKIT 103


>AT4G23740.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr4:12367063-12369159 FORWARD LENGTH=638
          Length = 638

 Score = 48.1 bits (113), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 23  VLCDANKEHVVDLVLPGMGLSGSIPDNTIGKLSRIQNLDLSCNIITG-LPSDF 74
           V C+ +   ++ + LPG+GL+G IP NTI +LS ++ L L  N+I+G  P DF
Sbjct: 61  VTCNQDGSRIIAVRLPGVGLNGQIPPNTISRLSALRVLSLRSNLISGEFPKDF 113


>AT2G26730.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr2:11388621-11391286 FORWARD LENGTH=658
          Length = 658

 Score = 46.6 bits (109), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 35/53 (66%), Gaps = 1/53 (1%)

Query: 23  VLCDANKEHVVDLVLPGMGLSGSIPDNTIGKLSRIQNLDLSCNIITG-LPSDF 74
           V C++N+  +  L LPG GL G IP  ++G+L+ ++ L L  N ++G +PSDF
Sbjct: 59  VECNSNQSSIHSLRLPGTGLVGQIPSGSLGRLTELRVLSLRSNRLSGQIPSDF 111