Miyakogusa Predicted Gene
- Lj1g3v3646460.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3646460.1 Non Chatacterized Hit- tr|C6TM83|C6TM83_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57763 PE,89.3,0,WD40
repeat-like,WD40-repeat-containing domain; WD40,WD40 repeat; SUBFAMILY
NOT NAMED,NULL; WD40 REP,CUFF.31023.1
(332 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G14530.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 558 e-159
AT5G66240.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 313 8e-86
AT5G66240.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 313 8e-86
AT5G66240.3 | Symbols: | Transducin/WD40 repeat-like superfamil... 306 1e-83
AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 75 4e-14
AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 68 1e-11
AT5G50230.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 65 4e-11
AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 59 5e-09
AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 57 2e-08
AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 57 2e-08
AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 53 3e-07
AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 53 3e-07
AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40 r... 51 1e-06
AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protei... 50 2e-06
AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 2e-06
AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 | chr5:867... 50 2e-06
AT1G62020.1 | Symbols: | Coatomer, alpha subunit | chr1:2291981... 50 3e-06
AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfam... 50 3e-06
AT5G60940.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 3e-06
AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfam... 49 3e-06
AT5G60940.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 49 4e-06
AT2G21390.1 | Symbols: | Coatomer, alpha subunit | chr2:9152428... 49 5e-06
>AT5G14530.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:4684782-4686865 REVERSE LENGTH=330
Length = 330
Score = 558 bits (1438), Expect = e-159, Method: Compositional matrix adjust.
Identities = 267/325 (82%), Positives = 294/325 (90%), Gaps = 1/325 (0%)
Query: 5 ALTELDDDLVRSMSIGAVFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKT 64
+LTELDD LVR M++GAVFSDFGG+I+S+ FHR DDLLVT++EDDS+RL+DIANAK LK
Sbjct: 2 SLTELDDGLVRRMAMGAVFSDFGGKIHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQLKI 61
Query: 65 TYHKKHGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLC 124
TYHKKHG DR+CFTHHPSSLICSSRYNLEST ESLRYLS+YDNR LRYFKGHK RVVSLC
Sbjct: 62 TYHKKHGTDRVCFTHHPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLC 121
Query: 125 MSPINDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKLF 184
MSPINDSFMSGSLD SVR+WDLRVNACQGILHLRGRPAVAYDQQGLVFA+AMEGGA+KLF
Sbjct: 122 MSPINDSFMSGSLDRSVRLWDLRVNACQGILHLRGRPAVAYDQQGLVFAIAMEGGAVKLF 181
Query: 185 DSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCGFNLE 244
DSR YDKGPFDTFLVGGDTAEV DIKFSNDGKSMLLTTTNN+ YVLDAY GEK+CGF+LE
Sbjct: 182 DSRCYDKGPFDTFLVGGDTAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLE 241
Query: 245 PSPGTTIEATFTPDGKYLVAGSGGGTMHAWNIETKNEVACWSSHIGVPWCLKWAPRRAMF 304
PS GT IEATFTPDGKY+++GSG GT+HAWNIE +EVA W ++IGV CLKWAPRRAMF
Sbjct: 242 PSQGTPIEATFTPDGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMF 301
Query: 305 AAASSVLTFWIPNN-EYGATATPIT 328
AAS+VLTFWIPN+ E A A P T
Sbjct: 302 VAASTVLTFWIPNDGESPAPADPPT 326
>AT5G66240.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:26466268-26468201 FORWARD LENGTH=328
Length = 328
Score = 313 bits (803), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 152/311 (48%), Positives = 215/311 (69%), Gaps = 5/311 (1%)
Query: 8 ELDDDLVRSMSIGAVFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYH 67
EL +++++SM GAVF D+ RI+SIDFH+ +VT ++DDS+RLYD+A+A LKT
Sbjct: 11 ELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINS 70
Query: 68 KKHGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSP 127
KK+G D +CFT HP+++I SSR + +SLR LS++DN+ LRYFKGH RVVSL +
Sbjct: 71 KKYGVDLVCFTSHPTTVIYSSRNGWD---DSLRLLSLHDNKYLRYFKGHHDRVVSLSLCS 127
Query: 128 INDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKLFDSR 187
+ F+SGSLD +V +WD RV CQG+L ++GRPA AYD QGL+FA+A GG I++FD+R
Sbjct: 128 GGECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAF-GGYIRMFDAR 186
Query: 188 SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCGFNLEPSP 247
Y+KGPF+ F VGGD +E +KFSNDG+ MLLTT + +VLD++ G F+++P
Sbjct: 187 MYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVA 246
Query: 248 G-TTIEATFTPDGKYLVAGSGGGTMHAWNIETKNEVACWSSHIGVPWCLKWAPRRAMFAA 306
G +T++A F+P+G ++V+GSG G+ HAW + + +V W P +KW P MF
Sbjct: 247 GESTLDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVT 306
Query: 307 ASSVLTFWIPN 317
SS L F IP+
Sbjct: 307 GSSELAFVIPD 317
>AT5G66240.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:26466348-26468201 FORWARD LENGTH=331
Length = 331
Score = 313 bits (803), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 152/311 (48%), Positives = 215/311 (69%), Gaps = 5/311 (1%)
Query: 8 ELDDDLVRSMSIGAVFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYH 67
EL +++++SM GAVF D+ RI+SIDFH+ +VT ++DDS+RLYD+A+A LKT
Sbjct: 14 ELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINS 73
Query: 68 KKHGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSP 127
KK+G D +CFT HP+++I SSR + +SLR LS++DN+ LRYFKGH RVVSL +
Sbjct: 74 KKYGVDLVCFTSHPTTVIYSSRNGWD---DSLRLLSLHDNKYLRYFKGHHDRVVSLSLCS 130
Query: 128 INDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKLFDSR 187
+ F+SGSLD +V +WD RV CQG+L ++GRPA AYD QGL+FA+A GG I++FD+R
Sbjct: 131 GGECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAF-GGYIRMFDAR 189
Query: 188 SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCGFNLEPSP 247
Y+KGPF+ F VGGD +E +KFSNDG+ MLLTT + +VLD++ G F+++P
Sbjct: 190 MYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVA 249
Query: 248 G-TTIEATFTPDGKYLVAGSGGGTMHAWNIETKNEVACWSSHIGVPWCLKWAPRRAMFAA 306
G +T++A F+P+G ++V+GSG G+ HAW + + +V W P +KW P MF
Sbjct: 250 GESTLDAAFSPEGMFVVSGSGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVT 309
Query: 307 ASSVLTFWIPN 317
SS L F IP+
Sbjct: 310 GSSELAFVIPD 320
>AT5G66240.3 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:26466268-26468201 FORWARD LENGTH=326
Length = 326
Score = 306 bits (783), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/311 (48%), Positives = 213/311 (68%), Gaps = 7/311 (2%)
Query: 8 ELDDDLVRSMSIGAVFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYH 67
EL +++++SM GAVF D+ RI+SIDFH+ +VT ++DDS+RLYD+A+A LKT
Sbjct: 11 ELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINS 70
Query: 68 KKHGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSP 127
KK+G D +CFT HP+++I SSR + +SLR LS++DN+ LRYFKGH RVVSL +
Sbjct: 71 KKYGVDLVCFTSHPTTVIYSSRNGWD---DSLRLLSLHDNKYLRYFKGHHDRVVSLSLCS 127
Query: 128 INDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKLFDSR 187
+ F+SGSLD +V +WD RV CQG+L ++GRPA AYD QGL+FA+A GG I++FD+R
Sbjct: 128 GGECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAF-GGYIRMFDAR 186
Query: 188 SYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCGFNLEPSP 247
Y+KGPF+ F VGGD +E +KFSNDG+ MLLTT + +VLD++ G F+++P
Sbjct: 187 MYEKGPFEIFSVGGDLSEANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVA 246
Query: 248 G-TTIEATFTPDGKYLVAGSGGGTMHAWNIETKNEVACWSSHIGVPWCLKWAPRRAMFAA 306
G +T++A F+P+G ++V SG G+ HAW + + +V W P +KW P MF
Sbjct: 247 GESTLDAAFSPEGMFVV--SGDGSTHAWGVRSGKQVHSWMGLGSEPPVIKWGPGSPMFVT 304
Query: 307 ASSVLTFWIPN 317
SS L F IP+
Sbjct: 305 GSSELAFVIPD 315
>AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:1207759-1209066 FORWARD LENGTH=333
Length = 333
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 123/258 (47%), Gaps = 19/258 (7%)
Query: 30 INSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICSSR 89
I+ + F +LL + + D ++ L+ N L+ H+ G + S L SS
Sbjct: 46 ISCVKFSNDGNLLASASVDKTMILWSATNYSLI----HRYEG-----HSSGISDLAWSSD 96
Query: 90 YNLESTAESLRYLSIYDNR----CLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWD 145
+ +A L I+D R CL+ +GH V + +P ++ +SGS D ++RIW+
Sbjct: 97 SHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWE 156
Query: 146 LRVNACQGILHLRGRP--AVAYDQQGLVFAVAMEGGAIKLFDSRSYDKGPFDTFLVGGDT 203
++ C ++ P +V +++ G + A G+ K++D++ +G L+ +
Sbjct: 157 VKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK---EGTCLKTLIDDKS 213
Query: 204 AEVCDIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCGFNLEPSPGTTIEATFT-PDGKYL 262
V KFS +GK +L+ T ++ + + G+ + + I + F+ +GKY+
Sbjct: 214 PAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYI 273
Query: 263 VAGSGGGTMHAWNIETKN 280
V+GS ++ W+++ +N
Sbjct: 274 VSGSEDNCVYLWDLQARN 291
>AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18413690-18415223 FORWARD LENGTH=317
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 126/300 (42%), Gaps = 19/300 (6%)
Query: 30 INSIDFHRKDDLLVTTAEDDSVRLYDIAN-----AKLLKTTYHKKHGADRICFTHHPSSL 84
++S+ F LL + + D ++R Y I A+ ++ ++G + F+ +
Sbjct: 27 VSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFI 86
Query: 85 ICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIW 144
+ +S ++L+ + ++ GH + +P ++ +SGS D +VRIW
Sbjct: 87 VSASD------DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIW 140
Query: 145 DLRVNACQGILHLRGRP--AVAYDQQGLVFAVAMEGGAIKLFDSRSYDKGPFDTFLVGGD 202
D+ C +L P AV +++ G + + G +++DS + G L+ +
Sbjct: 141 DVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGT---GHCVKTLIDDE 197
Query: 203 TAEVCDIKFSNDGKSMLLTTTNNHTYVLDAYGGEKRCGFNLEPSPGTTIEATFT-PDGKY 261
V ++FS +GK +L+ T +N + + + + + I + F+ +GK
Sbjct: 198 NPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKR 257
Query: 262 LVAGSGGGTMHAWNIETKNEVACWSSHIGVPWCLKWAPRRAMFAAAS--SVLTFWIPNNE 319
+V+GS +H W + +K + H + P + A+ S + W E
Sbjct: 258 IVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
>AT5G50230.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:20448632-20450855 REVERSE LENGTH=509
Length = 509
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 119/279 (42%), Gaps = 22/279 (7%)
Query: 28 GRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICS 87
G SI F L T +D +V+++D + L+K+ Y + TH S+I +
Sbjct: 226 GGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAA 285
Query: 88 SRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDS-FMSGSLDHSVRIWDL 146
+ N +L + R GH +V ++ +S + +S + D ++++WDL
Sbjct: 286 TSSN------NLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDL 339
Query: 147 RVNACQG-ILHLRGRPAVAYDQQGL-VFAVAMEGGAIKLFDSRSYDKGPFDTFLVGGDTA 204
C +L A+ GL VF+ M+G ++L+D ++ G + V G ++
Sbjct: 340 HKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGN-LRLWDIQT---GKLLSE-VAGHSS 394
Query: 205 EVCDIKFSNDGKSMLLTTTNN-----HTYVLDAYGGEKRCGFNLEPSPGTTIEATFTPDG 259
V + S +G +L + +N T L+ G + G L + + +PD
Sbjct: 395 AVTSVSLSRNGNRILTSGRDNVHNVFDTRTLEICGTLRASGNRLASNWS---RSCISPDD 451
Query: 260 KYLVAGSGGGTMHAWNIETKNEVACWSSHIGVPWCLKWA 298
Y+ AGS G++H W++ N V+ C W+
Sbjct: 452 DYVAAGSADGSVHVWSLSKGNIVSILKEQTSPILCCSWS 490
>AT5G08390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:2701448-2706910 FORWARD LENGTH=839
Length = 839
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 9/159 (5%)
Query: 30 INSIDFHRKDD-LLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICSS 88
+N + RK +LVT ED V L+ I + + Y G D + F L+ +
Sbjct: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDAS-EGLVAAG 77
Query: 89 RYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRV 148
+ + +++ + + + +R GH+ VS+ P + F SGSLD +++IWD+R
Sbjct: 78 -----AASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 149 NACQGIL--HLRGRPAVAYDQQGLVFAVAMEGGAIKLFD 185
C H RG + + G E +K++D
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWD 171
>AT5G23430.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=836
Length = 836
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 30 INSIDFHRKDD-LLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICSS 88
+N + RK +LVT ED V L+ I + + Y G D + F S ++ ++
Sbjct: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF--DASEVLVAA 76
Query: 89 RYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRV 148
+ + +++ + + + +R GH+ +S+ P + F SGSLD +++IWD+R
Sbjct: 77 ----GAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 149 NACQGIL--HLRGRPAVAYDQQGLVFAVAMEGGAIKLFD 185
C H RG + + G E +K++D
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD 171
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 21 AVFSDFG--GRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFT 78
A+ S +G I+S+ F + L+ A +++L+D+ AK+++T H ++ I
Sbjct: 51 AILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLT--GHRSNCISVD 108
Query: 79 HHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLD 138
HP +S S +L+ I C+ +KGH + V L +P +SG D
Sbjct: 109 FHPFGEFFAS----GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGED 164
Query: 139 HSVRIWDLRVNA--CQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKLFDSRSYDKGPFDT 196
+ V++WDL + H ++ + + A +K +D + F+
Sbjct: 165 NIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET-----FEL 219
Query: 197 FLVGG-DTAEVCDIKFSNDGKSML 219
GG +TA V + F+ DGK++L
Sbjct: 220 IGSGGPETAGVRCLSFNPDGKTVL 243
>AT5G23430.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:7894073-7899862 REVERSE LENGTH=837
Length = 837
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 30 INSIDFHRKDD-LLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICSS 88
+N + RK +LVT ED V L+ I + + Y G D + F S ++ ++
Sbjct: 19 VNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTF--DASEVLVAA 76
Query: 89 RYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRV 148
+ + +++ + + + +R GH+ +S+ P + F SGSLD +++IWD+R
Sbjct: 77 ----GAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRK 132
Query: 149 NACQGIL--HLRGRPAVAYDQQGLVFAVAMEGGAIKLFD 185
C H RG + + G E +K++D
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWD 171
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 91/204 (44%), Gaps = 16/204 (7%)
Query: 21 AVFSDFG--GRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFT 78
A+ S +G I+S+ F + L+ A +++L+D+ AK+++T H ++ I
Sbjct: 51 AILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLT--GHRSNCISVD 108
Query: 79 HHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLD 138
HP +S S +L+ I C+ +KGH + V L +P +SG D
Sbjct: 109 FHPFGEFFAS----GSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGED 164
Query: 139 HSVRIWDLRVNA--CQGILHLRGRPAVAYDQQGLVFAVAMEGGAIKLFDSRSYDKGPFDT 196
+ V++WDL + H ++ + + A +K +D + F+
Sbjct: 165 NIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLET-----FEL 219
Query: 197 FLVGG-DTAEVCDIKFSNDGKSML 219
GG +TA V + F+ DGK++L
Sbjct: 220 IGSGGPETAGVRCLSFNPDGKTVL 243
>AT1G61210.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1179
Length = 1179
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 30 INSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICSSR 89
++S+ F + L++ A ++L+D+ AK+++ + + F HP +S
Sbjct: 61 VDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEF--HPFGEFLAS- 117
Query: 90 YNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRVN 149
S+ +L+ I C++ +KGH + + ++ +P +SG LD+ V++WDL
Sbjct: 118 ---GSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAG 174
Query: 150 ACQGILHLRGRPAVAYDQQGLVFAVAMEGGA---IKLFDSRSYDKGPFDTFLVGGDTAE- 205
P + D L F +A G A +K +D +++ L+G E
Sbjct: 175 KLLHEFKFHEGPIRSLDFHPLEFLLAT-GSADRTVKFWDLETFE-------LIGSTRPEA 226
Query: 206 --VCDIKFSNDGKSML 219
V IKF DG+++
Sbjct: 227 TGVRSIKFHPDGRTLF 242
>AT1G61210.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:22564785-22571555 FORWARD LENGTH=1181
Length = 1181
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 30 INSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICSSR 89
++S+ F + L++ A ++L+D+ AK+++ + + F HP +S
Sbjct: 61 VDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEF--HPFGEFLAS- 117
Query: 90 YNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRVN 149
S+ +L+ I C++ +KGH + + ++ +P +SG LD+ V++WDL
Sbjct: 118 ---GSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAG 174
Query: 150 ACQGILHLRGRPAVAYDQQGLVFAVAMEGGA---IKLFDSRSYDKGPFDTFLVGGDTAE- 205
P + D L F +A G A +K +D +++ L+G E
Sbjct: 175 KLLHEFKFHEGPIRSLDFHPLEFLLAT-GSADRTVKFWDLETFE-------LIGSTRPEA 226
Query: 206 --VCDIKFSNDGKSML 219
V IKF DG+++
Sbjct: 227 TGVRSIKFHPDGRTLF 242
>AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40
repeat family protein | chr5:5504541-5509266 REVERSE
LENGTH=876
Length = 876
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 70/162 (43%), Gaps = 20/162 (12%)
Query: 39 DDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICSSRYNLESTAES 98
D LL + +R++D+ K +++ K H + H S L +TA +
Sbjct: 72 DKLLFSAGHSRQIRVWDLETLKCIRS--WKGHEGPVMGMACHASG-------GLLATAGA 122
Query: 99 LRYLSIYD---NRCLRYFKGHKQRVVSLCMSPINDS--FMSGSLDHSVRIWDLRV----N 149
R + ++D C YF+GHK V S+ P ++ +SGS D +VR+WDL
Sbjct: 123 DRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEK 182
Query: 150 ACQGIL--HLRGRPAVAYDQQGLVFAVAMEGGAIKLFDSRSY 189
C I+ H ++A + GL A + L+D Y
Sbjct: 183 KCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKVVNLWDLHDY 224
>AT2G41500.1 | Symbols: LIS, EMB2776 | WD-40 repeat family protein /
small nuclear ribonucleoprotein Prp4p-related |
chr2:17304319-17306855 REVERSE LENGTH=554
Length = 554
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/198 (21%), Positives = 74/198 (37%), Gaps = 7/198 (3%)
Query: 113 FKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRVNACQGIL-HLRGRPAVAYDQQGLV 171
K HK+R + SP++D + S D + ++W Q HL VA+ G
Sbjct: 294 LKDHKERATDVVFSPVDDCLATASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKY 353
Query: 172 FAVAMEGGAIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYVLD 231
+L+D + + L G + V I F DG ++ V D
Sbjct: 354 LGTTSYDKTWRLWDINT----GAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWD 409
Query: 232 AYGGEKRCGFNLEPSPGTTIEATFTPDGKYLVAGSGGGTMHAWNIETKNEVACWSSHIGV 291
G F P ++ F+P+G +L +G W++ + + +H +
Sbjct: 410 LRTGRSILVFQGHIKPVFSV--NFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANL 467
Query: 292 PWCLKWAPRRAMFAAASS 309
+K+ P+ F A +S
Sbjct: 468 VSQVKYEPQEGYFLATAS 485
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 78/179 (43%), Gaps = 18/179 (10%)
Query: 20 GAVFSDFGG---RINSIDFHRKDDLLVTTAEDDSVRLYDI-ANAKLLKTTYHKK--HGAD 73
G + F G R+ + FH L TT+ D + RL+DI A+LL H + +G
Sbjct: 329 GTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYG-- 386
Query: 74 RICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFM 133
I F +L S L+S A R + R + F+GH + V S+ SP
Sbjct: 387 -IAF-QQDGALAASC--GLDSLA---RVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLA 439
Query: 134 SGSLDHSVRIWDLRVNACQGIL--HLRGRPAVAYD-QQGLVFAVAMEGGAIKLFDSRSY 189
SG D+ RIWDLR+ I+ H V Y+ Q+G A A + ++ R +
Sbjct: 440 SGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDF 498
>AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:3733406-3739363 FORWARD LENGTH=1021
Length = 1021
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 25/225 (11%)
Query: 6 LTELDDDLVRSMSIGAVFSDFG-----GRINSIDFHRKDDLLVTTAEDDSVRLYDIANAK 60
LT DD V SIG S ++S+ F+ ++ L++ A ++L+D+ +K
Sbjct: 32 LTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESK 91
Query: 61 LLKTTYHKKHGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRV 120
+++ + + F HP +S S+ +LR C++ +KGH + +
Sbjct: 92 MVRAFTGHRSNCSAVEF--HPFGEFLAS----GSSDTNLRVWDTRKKGCIQTYKGHTRGI 145
Query: 121 VSLCMSPINDSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGGA 180
++ SP +SG LD+ V++WDL P + D L F +A G A
Sbjct: 146 STIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLAT-GSA 204
Query: 181 ---IKLFDSRSYDKGPFDTFLVGGDTAE---VCDIKFSNDGKSML 219
+K +D +++ L+G E V I F DG+++
Sbjct: 205 DRTVKFWDLETFE-------LIGTTRPEATGVRAIAFHPDGQTLF 242
>AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 |
chr5:8677117-8682058 FORWARD LENGTH=669
Length = 669
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 42 LVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLICSSRYNLESTAESLRY 101
+ + D + R++ + + L+ H +D C HP+ ++ S+ +++R
Sbjct: 475 FASCSHDRTARIWSMDRIQPLRIM--AGHLSDVDCVQWHPNCNYIAT----GSSDKTVRL 528
Query: 102 LSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVRIWDLRVNACQGILHLRGRP 161
+ C+R F GH+ V+SL MSP SG D ++ +WDL C I L G
Sbjct: 529 WDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARC--ITPLMGHN 586
Query: 162 ----AVAYDQQGLVFAVAMEGGAIKLFDSRSYDK 191
+++Y +G + A +KL+D S K
Sbjct: 587 SCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTK 620
>AT1G62020.1 | Symbols: | Coatomer, alpha subunit |
chr1:22919814-22923728 FORWARD LENGTH=1216
Length = 1216
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 23 FSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPS 82
F + G + + FH L V+ +D +++++ N + L T + F HH
Sbjct: 47 FDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQF-HHEY 105
Query: 83 SLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVR 142
I S+ S +++R + C+ GH V+ P D +S SLD +VR
Sbjct: 106 PWIVSA-----SDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Query: 143 IWDL 146
+WD+
Sbjct: 161 VWDI 164
>AT5G13480.1 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331557 REVERSE LENGTH=647
Length = 647
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 21/126 (16%)
Query: 27 GGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLIC 86
G + S+D+H LLV+ +D V+L+D + + L C H +++
Sbjct: 249 GWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGREL-------------CSLHGHKNIVL 295
Query: 87 SSRYNLES----TAESLRYLSIYDNRC---LRYFKGHKQRVVSLCMSPINDS-FMSGSLD 138
S ++N TA + + +YD R L+ F+GH + V SL P ++ F+SGS D
Sbjct: 296 SVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSD 355
Query: 139 HSVRIW 144
S+ W
Sbjct: 356 GSICHW 361
>AT5G60940.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:24523092-24525655 FORWARD LENGTH=429
Length = 429
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/316 (21%), Positives = 122/316 (38%), Gaps = 70/316 (22%)
Query: 4 PALTELDDDLVRSMSIGAVFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIAN--AKL 61
P + ++ ++ + F D IN +DFH + +L+++A+D+ ++ +D + AK
Sbjct: 153 PKVKQMISGDTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKR 212
Query: 62 LKTTYHKKHGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVV 121
+ H I F HPS + L T + +L YD +
Sbjct: 213 AFKVFQDTHNVRSISF--HPSG-----EFLLAGTDHPIPHL--YDVNTYQ---------- 253
Query: 122 SLCMSPIN--DSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGG 179
C P N DS +SG+++ V Y G ++ A + G
Sbjct: 254 --CFLPSNFPDSGVSGAINQ-----------------------VRYSSTGSIYITASKDG 288
Query: 180 AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYVL--------- 230
AI+LFD S + +EV F+ D + +L++ + T L
Sbjct: 289 AIRLFDGVSAK--CVRSIGNAHGKSEVTSAVFTKDQR-FVLSSGKDSTVKLWEIGSGRMV 345
Query: 231 DAYGGEKRCGFNLEPSPGTTIEATFTPDGKYLVA-GSGGGTMHAWNIETKNEVACW-SSH 288
Y G KR +A F +++++ + W+ T ++VA W S+H
Sbjct: 346 KEYLGAKRVKLRS--------QAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNH 397
Query: 289 IGVPWCLKWAPRRAMF 304
G P ++ +P ++F
Sbjct: 398 NGAPRWIEHSPVESVF 413
>AT5G13480.2 | Symbols: FY | Transducin/WD40 repeat-like superfamily
protein | chr5:4326638-4331506 REVERSE LENGTH=653
Length = 653
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 21/126 (16%)
Query: 27 GGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPSSLIC 86
G + S+D+H LLV+ +D V+L+D + + L C H +++
Sbjct: 255 GWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGREL-------------CSLHGHKNIVL 301
Query: 87 SSRYNLES----TAESLRYLSIYDNRC---LRYFKGHKQRVVSLCMSPINDS-FMSGSLD 138
S ++N TA + + +YD R L+ F+GH + V SL P ++ F+SGS D
Sbjct: 302 SVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSD 361
Query: 139 HSVRIW 144
S+ W
Sbjct: 362 GSICHW 367
>AT5G60940.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:24523757-24525655 FORWARD LENGTH=337
Length = 337
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 125/328 (38%), Gaps = 72/328 (21%)
Query: 4 PALTELDDDLVRSMSIGAVFSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIAN--AKL 61
P + ++ ++ + F D IN +DFH + +L+++A+D+ ++ +D + AK
Sbjct: 61 PKVKQMISGDTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKR 120
Query: 62 LKTTYHKKHGADRICFTHHPSSLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVV 121
+ H I F HPS + L T + +L YD +
Sbjct: 121 AFKVFQDTHNVRSISF--HPSG-----EFLLAGTDHPIPHL--YDVNTYQ---------- 161
Query: 122 SLCMSPIN--DSFMSGSLDHSVRIWDLRVNACQGILHLRGRPAVAYDQQGLVFAVAMEGG 179
C P N DS +SG+++ V Y G ++ A + G
Sbjct: 162 --CFLPSNFPDSGVSGAINQ-----------------------VRYSSTGSIYITASKDG 196
Query: 180 AIKLFDSRSYDKGPFDTFLVGGDTAEVCDIKFSNDGKSMLLTTTNNHTYVL--------- 230
AI+LFD S + +EV F+ D + +L++ + T L
Sbjct: 197 AIRLFDGVSAK--CVRSIGNAHGKSEVTSAVFTKDQR-FVLSSGKDSTVKLWEIGSGRMV 253
Query: 231 DAYGGEKRCGFNLEPSPGTTIEATFTPDGKYLVA-GSGGGTMHAWNIETKNEVACW-SSH 288
Y G KR +A F +++++ + W+ T ++VA W S+H
Sbjct: 254 KEYLGAKRVKLRS--------QAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNH 305
Query: 289 IGVPWCLKWAPRRAMFAAA--SSVLTFW 314
G P ++ +P ++F + FW
Sbjct: 306 NGAPRWIEHSPVESVFVTCGIDRSIRFW 333
>AT2G21390.1 | Symbols: | Coatomer, alpha subunit |
chr2:9152428-9156577 FORWARD LENGTH=1218
Length = 1218
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 23 FSDFGGRINSIDFHRKDDLLVTTAEDDSVRLYDIANAKLLKTTYHKKHGADRICFTHHPS 82
F + G + + FH L V+ +D +++++ + L T + F HH +
Sbjct: 47 FDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQF-HHEN 105
Query: 83 SLICSSRYNLESTAESLRYLSIYDNRCLRYFKGHKQRVVSLCMSPINDSFMSGSLDHSVR 142
I S+ S +++R + C+ GH V+ P D +S SLD +VR
Sbjct: 106 PWIVSA-----SDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVR 160
Query: 143 IWDL 146
+WD+
Sbjct: 161 VWDI 164