Miyakogusa Predicted Gene
- Lj1g3v3642070.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3642070.1 Non Chatacterized Hit- tr|Q60ET1|Q60ET1_ORYSJ
Putative uncharacterized protein OJ1504_G04.6
OS=Oryza,32.2,4e-17,PWWP,PWWP; Tudor/PWWP/MBT,NULL; no
description,NULL; seg,NULL; domain with conserved PWWP
motif,PWWP,CUFF.31061.1
(919 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G40340.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 186 6e-47
AT3G27860.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 141 2e-33
AT3G09670.2 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 119 8e-27
AT3G09670.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 119 8e-27
AT5G02950.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 115 2e-25
AT5G27650.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 108 1e-23
AT3G05430.1 | Symbols: | Tudor/PWWP/MBT superfamily protein | c... 106 6e-23
AT3G48190.1 | Symbols: ATM, ATATM | ataxia-telangiectasia mutate... 65 3e-10
AT3G61740.2 | Symbols: SDG14, ATX3 | SET domain protein 14 | chr... 54 4e-07
AT3G61740.1 | Symbols: SDG14, ATX3 | SET domain protein 14 | chr... 54 4e-07
>AT5G40340.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:16131654-16134680 REVERSE LENGTH=1008
Length = 1008
Score = 186 bits (473), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 110/265 (41%), Positives = 147/265 (55%), Gaps = 9/265 (3%)
Query: 173 FSVGDFVWGKIKSHPWWPGRIYDPSDASDFALKLRQKNRLLVAYFGDGTFAWCRPSQLKP 232
+ VGDFVWGKIK+HPWWPG+IYDPSDASD ALK++QK +LLVA FGDGTFAWC SQLKP
Sbjct: 125 YCVGDFVWGKIKNHPWWPGQIYDPSDASDLALKIKQKGKLLVACFGDGTFAWCGASQLKP 184
Query: 233 FRENFDDMVRQNSSRAFVNAVQEAANEVGRLLDSKMSYLSVARETRSGCTRSLASNAGIK 292
F E+F + + ++SR+F+ AV+EA E+GR ++ ++ A E + L +NAGIK
Sbjct: 185 FAESFKECSKVSNSRSFLGAVEEAVEEIGRHIE-RVLVCDCAEEKKHEFDSPLVNNAGIK 243
Query: 293 EGVHIPENGVGRLSDVLIDP-AELLTGVXXXXXXXXXXXXXXXXXXXARLSAFNLSRGGC 351
EGV + + +S +LI E+L V ++SAF S G
Sbjct: 244 EGVLVRDVRREMISSLLIGKHGEILKDVKSFAETVSFSGLLELEILKRKVSAFYRSNRGY 303
Query: 352 KLPSYEVPQPIPGLEDKETVGVVTSSKCVV----EAPAQGPFEDDYFILPGSPKSG---E 404
L Y PQ +PGLEDK + V + A+ ++ L S
Sbjct: 304 GLTEYHEPQSVPGLEDKNNDDDDDDEEKNVNDGLQWRAKRSRVEEVAALDHEESSSLQRS 363
Query: 405 LDHSHGIPRKRLNHRIKQKSIAEIL 429
L+ G P RL HR K+KSI EI+
Sbjct: 364 LEKCSGFPDHRLPHRRKEKSITEII 388
Score = 73.6 bits (179), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 753 LFISFGLGTSLPSKADLITLYSKFGALNESETAMLSTIYTGRVFFLKASDAEKALSHSQN 812
L+++FG G+SLP K DLI +Y KFGAL++ T + ++ V FL +D EKA S
Sbjct: 866 LYVTFGPGSSLPKKEDLIEIYEKFGALDKERTDTVDNNFSAHVAFLDVADGEKAFESSLE 925
Query: 813 TNPFGS-SKVSFRLQYHPAGSNSVANGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 871
PF S S V FRL+Y
Sbjct: 926 KCPFTSNSTVKFRLKY-----------------------PNERTEEKKTEAEVAETTMEV 962
Query: 872 NYIKQKLQGLTSMLEASD-FKSLDTKAKLESEMKGLLQDVSKM 913
Y+K+KL + +L+ + + + K KLE EM LL+ V +M
Sbjct: 963 EYLKKKLDEMKLLLDGCEGGMTEEVKVKLEGEMVNLLEKVIEM 1005
>AT3G27860.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:10326128-10328086 FORWARD LENGTH=652
Length = 652
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 109/200 (54%), Gaps = 9/200 (4%)
Query: 173 FSVGDFVWGK-IKSHPWWPGRIYDPSDASDFALKLRQKNRLLVAYFGDGT-FAWCRPSQL 230
F VGDFVWG+ S WWPG+IYD DASD ALK QK +LLVAYFGDG+ F WC P +L
Sbjct: 61 FHVGDFVWGEEANSQQWWPGQIYDSLDASDLALKTMQKGKLLVAYFGDGSFFGWCNPLEL 120
Query: 231 KPFRENFDDMVRQNSSRAFVNAVQEAANEVGRLLDSKMSYLSVARETRSGCTRSLASNAG 290
KPF ENF + + + SR F+ AV++A E+G ++ + A S+A N G
Sbjct: 121 KPFLENFKEFSKMSDSRRFLLAVEDAVREIGEHVEKFLVCDDAA------LVSSVALNLG 174
Query: 291 IKEGVHIPENGVGRLSD-VLIDPAELLTGVXXXXXXXXXXXXXXXXXXXARLSAFNLSRG 349
IK+GV +P+ +S VL +P +L V ++SAF +G
Sbjct: 175 IKDGVVVPDVRRKIISSLVLENPGVVLEDVKRLAMTVRFDDLLEIEVLRRKISAFYRCKG 234
Query: 350 GCKLPSYEVPQPIPGLEDKE 369
L ++ + I GLEDKE
Sbjct: 235 RFDLAKFDEHRYIIGLEDKE 254
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 26/188 (13%)
Query: 729 EKQAAVAKTVRKGTSENXXXXXXXLFISFGLGTSLPSKADLITLYSKFGALNESETAMLS 788
EKQ V + + + L+I G G++LPSK DLI Y KFGAL++ + M +
Sbjct: 488 EKQPEVKQEIVDEKEKTRNEPGVELYIKTGFGSTLPSKDDLIKTYEKFGALDKERSYMFN 547
Query: 789 TIYTGRVFFLKASDAEKALSHSQNTNPFG-SSKVSFRLQYHPAGSNSVANGEXXXXXXXX 847
V F+ ASD E+A + S PF +S V+F+L+Y + S+ E
Sbjct: 548 NNSCSCVAFVNASDGEEAFNRSLEKCPFATTSTVTFKLEYPSSASSEKKEAE-------- 599
Query: 848 XXXXXXXXXXXXXXXXXXXXXXXXNYIKQKLQGLTSMLEASDFK-SLDTKAKLESEMKGL 906
+K+KL+G+ ++L+ S+ K + + K KLE E + L
Sbjct: 600 ----------------TRKGVTEIECLKEKLEGIRALLDQSEGKITEELKMKLEDESRNL 643
Query: 907 LQDVSKMV 914
L V KM+
Sbjct: 644 LDKVRKMI 651
>AT3G09670.2 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:2966637-2968817 FORWARD LENGTH=726
Length = 726
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 118/264 (44%), Gaps = 19/264 (7%)
Query: 172 EFSVGDFVWGKIKSHPWWPGRIYDPSDASDFALKLRQKNRLLVAYFGDGTFAWCRPSQLK 231
+ S D VW K++SHPWWPG+++D S A+D A K +K LV YFGD TFAW S++K
Sbjct: 196 KISDSDLVWAKVRSHPWWPGQVFDASAATDKAKKHFKKGSFLVTYFGDCTFAWNEASRIK 255
Query: 232 PFRENFDDMVRQNSSRAFVNAVQEAANEVGRLLDSKMSYLSVARETRSGCTRSLASNAGI 291
PFR++F M +Q+S F++A+ A EV R ++ ++ ++ E N GI
Sbjct: 256 PFRQHFSQMAKQSSLPDFIDAIDFALEEVSRRIEFGLACSCISEEVYQKIKTQNVINPGI 315
Query: 292 KEGVHIPENGVGRLSDVLIDPAELLTGVXXXXXXXX--XXXXXXXXXXXARLSAFNLSRG 349
+E G S V +PA L+ V A+L AFN +G
Sbjct: 316 REDSSSIHGGDKVSSAVFFEPANLVGYVKRLACSPSYDATDALQLVSQRAQLLAFNRWKG 375
Query: 350 GCKLPSYEVPQPIPGLEDKETVGVVTSSKCVVEAPAQGPFEDDYFILPGSPKSGELDHSH 409
LP + Q G V S AP P E+ ++ S
Sbjct: 376 YTDLPEFMTLQ-----------GSVES------APKISPAEEQSSLVEVSDPEPTKSKQV 418
Query: 410 GIPRKRLNHRIKQKSIAEILGADK 433
R++ N + +Q S+ E+ DK
Sbjct: 419 YTKRRKTNLQTEQSSLVEVSDPDK 442
>AT3G09670.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:2966637-2968817 FORWARD LENGTH=726
Length = 726
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 118/264 (44%), Gaps = 19/264 (7%)
Query: 172 EFSVGDFVWGKIKSHPWWPGRIYDPSDASDFALKLRQKNRLLVAYFGDGTFAWCRPSQLK 231
+ S D VW K++SHPWWPG+++D S A+D A K +K LV YFGD TFAW S++K
Sbjct: 196 KISDSDLVWAKVRSHPWWPGQVFDASAATDKAKKHFKKGSFLVTYFGDCTFAWNEASRIK 255
Query: 232 PFRENFDDMVRQNSSRAFVNAVQEAANEVGRLLDSKMSYLSVARETRSGCTRSLASNAGI 291
PFR++F M +Q+S F++A+ A EV R ++ ++ ++ E N GI
Sbjct: 256 PFRQHFSQMAKQSSLPDFIDAIDFALEEVSRRIEFGLACSCISEEVYQKIKTQNVINPGI 315
Query: 292 KEGVHIPENGVGRLSDVLIDPAELLTGVXXXXXXXX--XXXXXXXXXXXARLSAFNLSRG 349
+E G S V +PA L+ V A+L AFN +G
Sbjct: 316 REDSSSIHGGDKVSSAVFFEPANLVGYVKRLACSPSYDATDALQLVSQRAQLLAFNRWKG 375
Query: 350 GCKLPSYEVPQPIPGLEDKETVGVVTSSKCVVEAPAQGPFEDDYFILPGSPKSGELDHSH 409
LP + Q G V S AP P E+ ++ S
Sbjct: 376 YTDLPEFMTLQ-----------GSVES------APKISPAEEQSSLVEVSDPEPTKSKQV 418
Query: 410 GIPRKRLNHRIKQKSIAEILGADK 433
R++ N + +Q S+ E+ DK
Sbjct: 419 YTKRRKTNLQTEQSSLVEVSDPDK 442
>AT5G02950.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:690953-692851 FORWARD LENGTH=632
Length = 632
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 86/141 (60%), Gaps = 2/141 (1%)
Query: 177 DFVWGKIKSHPWWPGRIYDPSDASDFALKLRQKNRLLVAYFGDGTFAWCRPSQLKPFREN 236
D VW K++S+PWWPG ++D S AS A++ +K +LVAYFGD TFAW SQ+KPF +N
Sbjct: 99 DLVWAKLRSYPWWPGLVFDKSVASKAAMRHFKKGNVLVAYFGDCTFAWNNASQIKPFHQN 158
Query: 237 FDDMVRQNSSRAFVNAVQEAANEVGRLLDSKMSYLSVARETRSGCTRSLASNAGIKEGVH 296
F M Q++S F +A+ A +EV R ++ +S V+ E + NAGI+E
Sbjct: 159 FSQMQEQSNSAEFRDAIDCALDEVSRRVEFGLSCSCVSEEAYNKLKTQNIINAGIREDSS 218
Query: 297 IPENGVGRLSD-VLIDPAELL 316
+ G +LSD + +PA+L+
Sbjct: 219 VRYGG-DKLSDGISFEPAKLV 238
>AT5G27650.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr5:9785511-9789094 FORWARD LENGTH=1072
Length = 1072
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 63/92 (68%)
Query: 171 YEFSVGDFVWGKIKSHPWWPGRIYDPSDASDFALKLRQKNRLLVAYFGDGTFAWCRPSQL 230
Y F VGD VWGK+KSHPWWPG I++ + AS ++R+ + +LVA+FGD ++ W P++L
Sbjct: 169 YGFEVGDLVWGKVKSHPWWPGHIFNEAFASPSVRRMRRIDHVLVAFFGDSSYGWFDPAEL 228
Query: 231 KPFRENFDDMVRQNSSRAFVNAVQEAANEVGR 262
PF N ++ +Q S+ FV AV+EA +E R
Sbjct: 229 IPFEPNLEEKSQQTVSKHFVRAVEEAKDEASR 260
>AT3G05430.1 | Symbols: | Tudor/PWWP/MBT superfamily protein |
chr3:1567745-1571037 FORWARD LENGTH=965
Length = 965
Score = 106 bits (265), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 63/92 (68%)
Query: 171 YEFSVGDFVWGKIKSHPWWPGRIYDPSDASDFALKLRQKNRLLVAYFGDGTFAWCRPSQL 230
Y F VGD VWGK+KSHPWWPG+I++ + AS ++++ +LVA+FGD ++ W P++L
Sbjct: 131 YGFEVGDMVWGKVKSHPWWPGQIFNEAFASPSVRRVKKMGYVLVAFFGDNSYGWFDPAEL 190
Query: 231 KPFRENFDDMVRQNSSRAFVNAVQEAANEVGR 262
PF + + +Q SS F AV+EA NEVGR
Sbjct: 191 IPFEPHVKEKSQQTSSDHFAKAVEEAMNEVGR 222
>AT3G48190.1 | Symbols: ATM, ATATM | ataxia-telangiectasia mutated |
chr3:17797628-17828361 FORWARD LENGTH=3845
Length = 3845
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 11/123 (8%)
Query: 155 SCQNKDLEME--YSGDEGYEFSVGDFVWGKIKSHPWWPGRIYDPSDASDFALKLRQKNRL 212
SC N++L Y DE EF VG+ VW K WWPG + D K K
Sbjct: 86 SCVNENLVKGNGYREDETQEFLVGNLVWVMTKYKKWWPGEVVD--------FKADAKESF 137
Query: 213 LVAYFGDGTF-AWCRPSQLKPFRENFDDMVRQNSSRAFVNAVQEAANEVGRLLDSKMSYL 271
+V G +W S+LKPF+E+F+ ++ Q + F +A+Q+A + + L M+
Sbjct: 138 MVRSIGQSHLVSWFASSKLKPFKESFEQVLNQRNDNGFFDALQKAMSLLSNSLKLDMTCS 197
Query: 272 SVA 274
+A
Sbjct: 198 CIA 200
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 13/157 (8%)
Query: 753 LFISFGLGTSLPSKADLITLYSKFGALNESETAMLSTIYTGRVFFLKASDAEKALSHSQN 812
LF+ F S+PS+ DL + +S FG L+ SET + +V F+ ++DA +A+ +
Sbjct: 691 LFLKFSSQVSMPSRDDLTSTFSAFGPLDSSETHVSEEFSGAQVAFVSSADAIEAVKSLEK 750
Query: 813 TNPFGSSKVSFRLQYHPAGSNSVANGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 872
NPFG + V+FRLQ + +
Sbjct: 751 ANPFGETLVNFRLQ------------QKLITVQRNIAPRMPVISHVSPVPKPNNIPTSMD 798
Query: 873 YIKQKLQGLTSMLEAS-DFKSLDTKAKLESEMKGLLQ 908
++Q L +T+MLE S D S +TKAKL+SE+ GLL+
Sbjct: 799 AMRQNLLMMTAMLEKSGDSLSRETKAKLKSEITGLLE 835
>AT3G61740.2 | Symbols: SDG14, ATX3 | SET domain protein 14 |
chr3:22851133-22856548 REVERSE LENGTH=982
Length = 982
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 172 EFSVGDFVWGKI-KSHPWWPGRIYDP-SDASDFALKLRQKNRLLVAYFG---DGT---FA 223
EF+VGD VW K K P WP + DP S A D LK + V +FG DGT +A
Sbjct: 186 EFTVGDLVWAKCGKRFPAWPAVVIDPISQAPDGVLKHCVPGAICVMFFGYSKDGTQRDYA 245
Query: 224 WCRPSQLKPFRENFDDMVRQNS-----SRAFVNAVQEAA 257
W R + PF E D Q + + F A++EA
Sbjct: 246 WVRQGMVYPFTEFMDKFQDQTNLFNYKASEFNKALEEAV 284
>AT3G61740.1 | Symbols: SDG14, ATX3 | SET domain protein 14 |
chr3:22851133-22856548 REVERSE LENGTH=1018
Length = 1018
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 172 EFSVGDFVWGKI-KSHPWWPGRIYDP-SDASDFALKLRQKNRLLVAYFG---DGT---FA 223
EF+VGD VW K K P WP + DP S A D LK + V +FG DGT +A
Sbjct: 186 EFTVGDLVWAKCGKRFPAWPAVVIDPISQAPDGVLKHCVPGAICVMFFGYSKDGTQRDYA 245
Query: 224 WCRPSQLKPFRENFDDMVRQNS-----SRAFVNAVQEAA 257
W R + PF E D Q + + F A++EA
Sbjct: 246 WVRQGMVYPFTEFMDKFQDQTNLFNYKASEFNKALEEAV 284