Miyakogusa Predicted Gene

Lj1g3v3641920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3641920.1 tr|G7J524|G7J524_MEDTR Argininosuccinate synthase
OS=Medicago truncatula GN=MTR_3g088970 PE=3 SV=1,80.29,0,Adenine
nucleotide alpha hydrolases-like,NULL;
ARGININOSUCCIN_SYN_1,Argininosuccinate synthase, cons,CUFF.30990.1
         (235 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G24830.1 | Symbols:  | arginosuccinate synthase family | chr4...   218   4e-57
AT4G24830.2 | Symbols:  | arginosuccinate synthase family | chr4...   216   7e-57

>AT4G24830.1 | Symbols:  | arginosuccinate synthase family |
           chr4:12793085-12795857 REVERSE LENGTH=494
          Length = 494

 Score =  218 bits (554), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 114/180 (63%), Positives = 130/180 (72%), Gaps = 5/180 (2%)

Query: 26  FQHQFCKTNSLSSNELGPRTSVVGAR--KTQVIKAVLQDIKIPETKNV--TGLRGKLNKV 81
           FQ    K + L  N +     V G+R  K Q I+AVL       T +    GLRGKL KV
Sbjct: 41  FQELSLKRSQLVGNAV-VTGHVTGSRSCKNQAIRAVLSGDGTALTTDSKEAGLRGKLKKV 99

Query: 82  VLAYSGGLDTSVVVPWLRENYGCDVVCFTADVXXXXXXXXXXXXXXXXSGASQLVVKDLK 141
           VLAYSGGLDTSV+VPWL+ENYGC+VVCFTADV                SGASQLVVKDL 
Sbjct: 100 VLAYSGGLDTSVIVPWLKENYGCEVVCFTADVGQGIKELEGLEQKAKASGASQLVVKDLT 159

Query: 142 EEFVRDYVFPCLRAGALYERKYLLGTAIARPVIAKAMVDIAKEVGADAVSHGCTGKGNDQ 201
           EEFV+D++FPCLRAGA+YERKYLLGT++ARPVIAKAMVD+A EVGADAV+HGCTGKGNDQ
Sbjct: 160 EEFVKDFIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAAEVGADAVAHGCTGKGNDQ 219


>AT4G24830.2 | Symbols:  | arginosuccinate synthase family |
           chr4:12793085-12795857 REVERSE LENGTH=450
          Length = 450

 Score =  216 bits (551), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 114/180 (63%), Positives = 130/180 (72%), Gaps = 5/180 (2%)

Query: 26  FQHQFCKTNSLSSNELGPRTSVVGAR--KTQVIKAVLQDIKIPETKNV--TGLRGKLNKV 81
           FQ    K + L  N +     V G+R  K Q I+AVL       T +    GLRGKL KV
Sbjct: 41  FQELSLKRSQLVGNAV-VTGHVTGSRSCKNQAIRAVLSGDGTALTTDSKEAGLRGKLKKV 99

Query: 82  VLAYSGGLDTSVVVPWLRENYGCDVVCFTADVXXXXXXXXXXXXXXXXSGASQLVVKDLK 141
           VLAYSGGLDTSV+VPWL+ENYGC+VVCFTADV                SGASQLVVKDL 
Sbjct: 100 VLAYSGGLDTSVIVPWLKENYGCEVVCFTADVGQGIKELEGLEQKAKASGASQLVVKDLT 159

Query: 142 EEFVRDYVFPCLRAGALYERKYLLGTAIARPVIAKAMVDIAKEVGADAVSHGCTGKGNDQ 201
           EEFV+D++FPCLRAGA+YERKYLLGT++ARPVIAKAMVD+A EVGADAV+HGCTGKGNDQ
Sbjct: 160 EEFVKDFIFPCLRAGAIYERKYLLGTSMARPVIAKAMVDVAAEVGADAVAHGCTGKGNDQ 219