Miyakogusa Predicted Gene
- Lj1g3v3608470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3608470.1 Non Chatacterized Hit- tr|I1KYV3|I1KYV3_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,67.39,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; seg,NULL;
SNF2_N,SNF2-related; HELICASE_A,CUFF.30974.1
(279 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 | chr3:88... 229 1e-60
AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 | chr1:16... 229 2e-60
AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 | c... 110 8e-25
AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 | chr5:68... 107 1e-23
AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containin... 105 3e-23
AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 | chr2:91... 100 2e-21
AT3G32330.1 | Symbols: | DNA repair protein-related | chr3:1327... 65 6e-11
AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA ... 55 5e-08
AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic ac... 55 5e-08
AT3G31900.1 | Symbols: | ATP-dependent helicase family protein ... 55 7e-08
AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 | chr... 54 1e-07
AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleosid... 53 2e-07
AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside triph... 53 2e-07
AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside triph... 53 2e-07
AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside triph... 53 2e-07
AT3G32280.1 | Symbols: | ATP-dependent helicase family protein ... 52 4e-07
AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 | chr2:8129... 50 1e-06
AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containi... 50 2e-06
>AT3G24340.1 | Symbols: chr40 | chromatin remodeling 40 |
chr3:8832085-8835722 REVERSE LENGTH=1132
Length = 1132
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 127/273 (46%), Positives = 169/273 (61%), Gaps = 21/273 (7%)
Query: 9 SMNENPEAETSVLEKVLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQ 68
+ N+N E V ++L+E+PGLLVLDEGHTPRNQ S IW VL+ ++T+KRI LSGT FQ
Sbjct: 722 AANKNTEG-MQVFRRMLVELPGLLVLDEGHTPRNQSSLIWKVLTEVRTEKRIFLSGTLFQ 780
Query: 69 NNFVELYNTLCLVKPSFPDMIPPELKKFCQSRLMQERKASQDFTWEQVSPGNITTGNPSD 128
NNF EL N LCL +P+ D I SR+ + K SQ+ +V+ N
Sbjct: 781 NNFKELSNVLCLARPADKDTI--------SSRIHELSKCSQEGEHGRVNEEN-------- 824
Query: 129 VKIQQLKLWMDPFVHVHKGSILQENLPGLRDCVLILKPDXXXXXXXXXXXXXXXXXNFEH 188
+I LK + FVHVH+G+ILQE+LPGLRDCV++L P FEH
Sbjct: 825 -RIVDLKAMIAHFVHVHEGTILQESLPGLRDCVVVLNPPFQQKKILDRIDTSQNTFEFEH 883
Query: 189 KLVLASVHPSLFLCCTLTEKEESVVD---RDRLEKLRSNPYVGAKTRFLVEFVRLCEAVN 245
KL SVHPSL+LCC T+KE+ V+ L++LR G KT+FL++F+R+ V
Sbjct: 884 KLSAVSVHPSLYLCCNPTKKEDLVIGPATLGTLKRLRLKYEEGVKTKFLIDFIRISGTVK 943
Query: 246 EKVLVFSQFIDPLNLIMDQLKSNFDWIEGQEVL 278
EKVLV+SQ+ID L LIM+QL + DW EG+++L
Sbjct: 944 EKVLVYSQYIDTLKLIMEQLIAECDWTEGEQIL 976
>AT1G05490.1 | Symbols: chr31 | chromatin remodeling 31 |
chr1:1618795-1623195 REVERSE LENGTH=1410
Length = 1410
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 129/273 (47%), Positives = 166/273 (60%), Gaps = 22/273 (8%)
Query: 14 PEAETSVLEKVLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNNFVE 73
P+ E + ++L+ PGLLVLDE HTPRNQRS IW LS+++TQKRI+LSGTPFQNNF+E
Sbjct: 990 PDKELDDIREILMGRPGLLVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLE 1049
Query: 74 LYNTLCLVKPSFPDMIPPELKKFCQSRLMQERKASQDFTWEQVSPGNITTGNPSDVKIQQ 133
L N L L +P + + + LKK S + ++ ++ E + G I++
Sbjct: 1050 LCNVLGLARPKYLERLTSTLKK---SGMTVTKRGKKNLGNEINNRG-----------IEE 1095
Query: 134 LKLWMDPFVHVHKGSILQENLPGLRDCVLILKPDXXXXXXXXXXXXXXXXXN-----FEH 188
LK M PFVHVHKGSILQ +LPGLR+CV++L P EH
Sbjct: 1096 LKAVMLPFVHVHKGSILQSSLPGLRECVVVLNPPELQRRVLESIEVTHNRKTKNVFETEH 1155
Query: 189 KLVLASVHPSLFLCCTLTEKEESVVDR---DRLEKLRSNPYVGAKTRFLVEFVRLCEAVN 245
KL L SVHPSL C ++EKE +D +L+K+R +P KTRFL+EFV LCE +
Sbjct: 1156 KLSLVSVHPSLVSRCKISEKERLSIDEALLAQLKKVRLDPNQSVKTRFLMEFVELCEVIK 1215
Query: 246 EKVLVFSQFIDPLNLIMDQLKSNFDWIEGQEVL 278
EKVLVFSQ+IDPL LIM L S F W G+EVL
Sbjct: 1216 EKVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVL 1248
>AT3G42670.1 | Symbols: CHR38, CLSY | chromatin remodeling 38 |
chr3:14755906-14760085 REVERSE LENGTH=1256
Length = 1256
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 133/278 (47%), Gaps = 17/278 (6%)
Query: 16 AETSVLEKVLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNNFVELY 75
A + KVL E PGLLVLDEGH PR+ +S + L ++ T RI+LSGT FQNNF E +
Sbjct: 830 AHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNNFCEYF 889
Query: 76 NTLCLVKPSFPDMIPPEL-KKFCQSRLMQ------ERKASQDFTWEQVSPGNITTGNPSD 128
NTLCL +P F + EL KKF ++ Q E +A + F + G+
Sbjct: 890 NTLCLARPKFVHEVLVELDKKFQTNQAEQKAPHLLENRARKFFLDIIAKKIDTKVGDERL 949
Query: 129 VKIQQLKLWMDPFVHVHKGSILQEN--LPGLRDCVLILKPDXXXXXXXXXXXXXXXXXN- 185
+ L+ F+ ++GS LPGL+ L++ +
Sbjct: 950 QGLNMLRNMTSGFIDNYEGSGSGSGDVLPGLQIYTLLMNSTDVQHKSLTKLQNIMSTYHG 1009
Query: 186 ----FEHKLVLASVHPSLFLCCTLTEKEESVVDRDRLEKLRSNPYVGAKTRFLVEFV-RL 240
E + LA++HP L T K + + +EKL+ + G+K F++ V R+
Sbjct: 1010 YPLELELLITLAAIHPWLVKTTTCCAKFFNPQELLEIEKLKHDAKKGSKVMFVLNLVFRV 1069
Query: 241 CEAVNEKVLVFSQFIDPLNLIMDQLKSNFDWIEGQEVL 278
+ EK+L+F I P+ L ++ ++ F W G+E+L
Sbjct: 1070 VK--REKILIFCHNIAPIRLFLELFENVFRWKRGRELL 1105
>AT5G20420.1 | Symbols: CHR42 | chromatin remodeling 42 |
chr5:6899015-6903266 REVERSE LENGTH=1261
Length = 1261
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/297 (29%), Positives = 143/297 (48%), Gaps = 24/297 (8%)
Query: 1 MGKEKKHASMNENPE-AETSVLEKVLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKR 59
MG M E+ + A + KVL E PGLLVLDEGH PR+ +S + L ++ T R
Sbjct: 820 MGYTSFTTLMREDSKFAHRKYMAKVLRESPGLLVLDEGHNPRSTKSRLRKALMKVGTDLR 879
Query: 60 IILSGTPFQNNFVELYNTLCLVKPSFPDMIPPEL-KKFCQSRLMQ------ERKASQDFT 112
I+LSGT FQNNF E +NTLCL +P F + EL +KF + + E +A + F
Sbjct: 880 ILLSGTLFQNNFCEYFNTLCLARPKFIHEVLMELDQKFKTNHGVNKAPHLLENRARKLFL 939
Query: 113 WEQVSPGNITTGNPSDVKIQQLKLWMDPFVHVHK--GSILQENLPGLRDCVLILKP-DXX 169
+ + G+ + LK + F+ ++ GS + LPGL+ L++ D
Sbjct: 940 DIIAKKIDASVGDERLQGLNMLKNMTNGFIDNYEGSGSGSGDALPGLQIYTLVMNSTDIQ 999
Query: 170 XXXXXXXXXXXXXXXNF----EHKLVLASVHPSLFL---CCTLTEKEESVVDRDRLEKLR 222
+ E ++ LA++HP L CCT + + + + KL+
Sbjct: 1000 HKILTKLQDVIKTYFGYPLEVELQITLAAIHPWLVTSSNCCTKFFNPQELSE---IGKLK 1056
Query: 223 SNPYVGAKTRFLVEFV-RLCEAVNEKVLVFSQFIDPLNLIMDQLKSNFDWIEGQEVL 278
+ G+K F++ + R+ + EK+L+F I P+ + + ++ F W G+E+L
Sbjct: 1057 HDAKKGSKVMFVLNLIFRVVK--REKILIFCHNIAPIRMFTELFENIFRWQRGREIL 1111
>AT2G16390.1 | Symbols: DRD1, CHR35, DMS1 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr2:7097638-7101182 FORWARD LENGTH=888
Length = 888
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 135/273 (49%), Gaps = 24/273 (8%)
Query: 22 EKVLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNNFVELYNTLCLV 81
+++LL+VP +L+LDEGHTPRN+ +++ L+++QT ++++LSGT +QN+ E++N L LV
Sbjct: 479 QEILLKVPSILILDEGHTPRNEDTNLLQSLAQVQTPRKVVLSGTLYQNHVKEVFNILNLV 538
Query: 82 KPSF--PDMIPPELKKF-----CQSR-LMQERKASQDFTWEQVSPGNITTGNPSDVK--- 130
+P F D +K+ C R + + + + + VK
Sbjct: 539 RPKFLKLDTSKSAVKRILAYTPCDVRGRLTGSNSDMASMFNETVEHTLQKSEDFTVKIKV 598
Query: 131 IQQLKLWMDPFVHVHKGSILQENLPGLRDCVLILKPDXXXXXXXXXXXXXXXXXNFEHKL 190
IQ L+ +H +KG L E LPGL D ++L + F+
Sbjct: 599 IQDLREMTKKVLHYYKGDFLDE-LPGLADFTVVL--NLSPKQLNEVKKLRREKRKFKVSA 655
Query: 191 VLASV--HPSLFLCCTLTEKEESVVDR---DRLEKLRSNPYVGAKTRFLVEFVRLCEAVN 245
V +++ HP L + ++K + V D + +EKL N G K +F + + LC++
Sbjct: 656 VGSAIYLHPKLKV---FSDKSDDVSDTTMDEMVEKLDLNE--GVKAKFFLNLINLCDSAG 710
Query: 246 EKVLVFSQFIDPLNLIMDQLKSNFDWIEGQEVL 278
EK+LVFSQ++ PL + W G+EV
Sbjct: 711 EKLLVFSQYLIPLKFLERLAALAKGWKLGKEVF 743
>AT2G21450.1 | Symbols: CHR34 | chromatin remodeling 34 |
chr2:9179622-9182356 REVERSE LENGTH=816
Length = 816
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 137/287 (47%), Gaps = 21/287 (7%)
Query: 11 NENPEAETSVLEKVLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNN 70
++N EA + + +LLE P LL+LDEGHT RN+ + + + L+R++T+++++L+GT FQNN
Sbjct: 385 DDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSLARVKTRRKVVLTGTLFQNN 444
Query: 71 FVELYNTLCLVKPSF------PDMIPPELKKFCQSRLMQERKASQD-----FTWEQVSPG 119
E++N L LV+P F +++ + K R Q ++S F +++
Sbjct: 445 VEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSSSIEGTFFAAVELTLQ 504
Query: 120 NITTGNPSDVKIQQLKLWMDPFVHVHKGSILQENLPGLRDCVLILKPDXXXXXXXXXXXX 179
T + I+ L+ +H HK LPGL + ++L
Sbjct: 505 RSTNFSAKASLIKDLREMTRNILHYHKAD-FSGLLPGLSEFTVMLNLSSIQRDEVKGLRK 563
Query: 180 XXXXXNFEHKLVLASVHPSL--FLCCTLTEKEESVVDRD----RLEKL--RSNPYVGAKT 231
L +HP L FL + E+ D + +L+K+ + N G K
Sbjct: 564 MELFKQISLGAALY-IHPKLKSFLEENPSNGEKGFSDNNTTVMKLDKMLKKINVRDGVKM 622
Query: 232 RFLVEFVRLCEAVNEKVLVFSQFIDPLNLIMDQLKSNFDWIEGQEVL 278
+F + + LCE+ EK+LVFSQ+I P+ + + S W G+E+
Sbjct: 623 KFFLNLLALCESTGEKLLVFSQYIVPIKTLERLMSSMKGWRLGKEMF 669
>AT3G32330.1 | Symbols: | DNA repair protein-related |
chr3:13276082-13277155 FORWARD LENGTH=327
Length = 327
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 7/172 (4%)
Query: 1 MGKEKKHASMNENPEAETS-VLEKVLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKR 59
+G ++ +++N AE S +LL + ++V D G PRN+ S V+SRI+T +
Sbjct: 102 LGAKQFSNIVSDNSGAEASDSCRDILLNILSVVVFDRGTDPRNEMMSFLKVVSRIKTPHK 161
Query: 60 IILSGTPFQNNFVELYNTLCLVKPSF--PDMIPPELKKFCQSRLMQERKASQDFTWEQVS 117
++L+G+ +QNN E++N L + P F + I +K + ++++
Sbjct: 162 VLLTGSLYQNNIKEVFNILDVAFPEFLKHNQIGKNFRKLLNVEADGPSTNLKMPLFDKLE 221
Query: 118 PGNITTGNPSDVKI---QQLKLWMDPFVHVHKGSILQENLPGLRDCVLILKP 166
++ + KI +LK+ + ++ HKG L E +PGL D ++LKP
Sbjct: 222 EALLSQDSDHGDKICYLTELKMLTNKVIYNHKGECLLE-VPGLMDFTVVLKP 272
>AT3G54280.1 | Symbols: CHR16, CHA16, RGD3, ATBTAF1, BTAF1 | DNA
binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20103807 FORWARD
LENGTH=2045
Length = 2045
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 33 VLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNNFVELYNTLCLVKPSF 85
+LDEGH +N +S I + +++ Q R+ILSGTP QNN +EL++ + P F
Sbjct: 1582 ILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGF 1634
>AT3G54280.2 | Symbols: RGD3 | DNA binding;ATP binding;nucleic acid
binding;binding;helicases;ATP binding;DNA
binding;helicases | chr3:20092361-20104153 FORWARD
LENGTH=2129
Length = 2129
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 33 VLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNNFVELYNTLCLVKPSF 85
+LDEGH +N +S I + +++ Q R+ILSGTP QNN +EL++ + P F
Sbjct: 1613 ILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTPIQNNIMELWSLFDFLMPGF 1665
>AT3G31900.1 | Symbols: | ATP-dependent helicase family protein |
chr3:12875071-12877422 FORWARD LENGTH=393
Length = 393
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 3/90 (3%)
Query: 9 SMNENPEAETSVLEKVLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQ 68
S N EA S + +LL + ++V G PRN+ S V+SRI+T +++L+G+ +Q
Sbjct: 293 SDNSGAEASDSCRD-ILLNILSVVVFGRGTDPRNEMMSFLKVVSRIKTPHKVLLTGSLYQ 351
Query: 69 NNFVELYNTLCLVKPSF--PDMIPPELKKF 96
NN E++N L + P F + I +KF
Sbjct: 352 NNIKEVFNILDVAFPEFLKHNQIGKNFRKF 381
>AT5G44800.1 | Symbols: CHR4, PKR1 | chromatin remodeling 4 |
chr5:18083659-18092162 REVERSE LENGTH=2223
Length = 2223
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 16 AETSVLEKVLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNNFVELY 75
A++S L V EV LV+DEGH +N S ++++L+ Q R++L+GTP QNN E+Y
Sbjct: 813 ADSSHLRGVPWEV---LVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMY 869
Query: 76 NTLCLVK 82
N L ++
Sbjct: 870 NLLNFLQ 876
>AT1G08600.1 | Symbols: ATRX, CHR20 | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1458
Length = 1458
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 24 VLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNNFVELYNTLCLVKP 83
L + P +LV DE H +N ++ L +++ Q+RI L+G+P QNN +E Y + V+
Sbjct: 843 ALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 902
Query: 84 SFPDMIPPELKKF 96
F P +F
Sbjct: 903 GFLGSSPEFRNRF 915
>AT1G08600.2 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 24 VLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNNFVELYNTLCLVKP 83
L + P +LV DE H +N ++ L +++ Q+RI L+G+P QNN +E Y + V+
Sbjct: 864 ALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 923
Query: 84 SFPDMIPPELKKF 96
F P +F
Sbjct: 924 GFLGSSPEFRNRF 936
>AT1G08600.4 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 24 VLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNNFVELYNTLCLVKP 83
L + P +LV DE H +N ++ L +++ Q+RI L+G+P QNN +E Y + V+
Sbjct: 864 ALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 923
Query: 84 SFPDMIPPELKKF 96
F P +F
Sbjct: 924 GFLGSSPEFRNRF 936
>AT1G08600.3 | Symbols: ATRX | P-loop containing nucleoside
triphosphate hydrolases superfamily protein |
chr1:2724562-2733431 FORWARD LENGTH=1479
Length = 1479
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 24 VLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNNFVELYNTLCLVKP 83
L + P +LV DE H +N ++ L +++ Q+RI L+G+P QNN +E Y + V+
Sbjct: 864 ALRDGPDILVCDEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVRE 923
Query: 84 SFPDMIPPELKKF 96
F P +F
Sbjct: 924 GFLGSSPEFRNRF 936
>AT3G32280.1 | Symbols: | ATP-dependent helicase family protein |
chr3:13233832-13240154 FORWARD LENGTH=474
Length = 474
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 1 MGKEKKHASMNENPEAETS-VLEKVLLEVPGLLVLDEGHTPRNQRSSIWNVLSRIQTQKR 59
+G ++ +++N AE S +LL + ++V D G PRN+ V+SRI+T +
Sbjct: 389 LGAKQFSNIVSDNSGAEASDSCRDILLNILSVVVFDRGTDPRNEMMCFLKVVSRIKTPHK 448
Query: 60 IILSGTPFQNNFVELYNTLCLVKPSF 85
++L+G+ ++NN E++N + P+F
Sbjct: 449 VLLTGSLYKNNIKEVFNIFDVAFPNF 474
>AT2G18760.1 | Symbols: CHR8 | chromatin remodeling 8 |
chr2:8129154-8133502 FORWARD LENGTH=1187
Length = 1187
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 30 GLLVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNNFVELYNTLCLVKPSFPDMI 89
G VLDEGH RN S I V ++QT RII++G P QN EL++ V P ++
Sbjct: 540 GYAVLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNKLTELWSLFDFVFPGKLGVL 599
Query: 90 P 90
P
Sbjct: 600 P 600
>AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | SNF2 domain-containing
protein / helicase domain-containing protein |
chr3:4065636-4073992 FORWARD LENGTH=2055
Length = 2055
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 32 LVLDEGHTPRNQRSSIWNVLSRIQTQKRIILSGTPFQNNFVELYNTLCLVKP 83
L+LDE H +N +S W L +++RI+L+GTP QN+ +EL++ + + P
Sbjct: 661 LILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMP 712