Miyakogusa Predicted Gene

Lj1g3v3608420.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3608420.2 Non Chatacterized Hit- tr|K4CW72|K4CW72_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,68.49,0,NUCLEOLAR GTP-BINDING PROTEIN 1,NULL; DEVELOPMENTALLY
REGULATED GTP-BINDING PROTEIN-RELATED,NULL; P-,CUFF.30976.2
         (435 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G80770.1 | Symbols: PDE318 | P-loop containing nucleoside tri...   546   e-155
AT1G80770.2 | Symbols: PDE318 | P-loop containing nucleoside tri...   518   e-147
AT1G50920.1 | Symbols:  | Nucleolar GTP-binding protein | chr1:1...   120   3e-27
AT1G10300.1 | Symbols:  | Nucleolar GTP-binding protein | chr1:3...   111   9e-25
AT5G18570.1 | Symbols: EMB269, ATOBGC, CPSAR1 | GTP1/OBG family ...    57   2e-08
AT1G07615.1 | Symbols:  | GTP-binding protein Obg/CgtA | chr1:23...    53   4e-07

>AT1G80770.1 | Symbols: PDE318 | P-loop containing nucleoside
           triphosphate hydrolases superfamily protein |
           chr1:30355266-30357786 FORWARD LENGTH=451
          Length = 451

 Score =  546 bits (1406), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 273/419 (65%), Positives = 330/419 (78%), Gaps = 10/419 (2%)

Query: 16  SILLLTSSKVKPSAKLHPNLCFFCKSIQTDSYQVADGSYVPTLDPTNQNKTMERP----- 70
           + +  T+S  K      P+L   C+++QT    +   SY+PT   T   K +E P     
Sbjct: 24  AFIFSTASTTKSHTFWSPSL-RQCRNLQTALSPIVSSSYLPTSYITQ--KQIEIPTSPEK 80

Query: 71  --PRTVESIGAFQKLPIVMPSIDILGSALRKAKRVPPTKGIPNIAKRERNKGAKQLDALM 128
             P   E +GAFQKLP+VMPSID+  SALRK+KRV PTKGI NIAKRERN+GAKQLDA M
Sbjct: 81  QSPPVQEGLGAFQKLPMVMPSIDLYASALRKSKRVQPTKGIANIAKRERNRGAKQLDAFM 140

Query: 129 KELAVPLRTYVENFPNKTHLHPYERSLVELTLGDGHYEKVLRSVDDLRKRVVLVGKEQAS 188
           KELA+PL+ Y+E+FP K  LHPYERSL++LTLGDG YE+VL  VD LRK+V  VGKE AS
Sbjct: 141 KELALPLKGYMESFPRKKLLHPYERSLIDLTLGDGKYEEVLGKVDVLRKKVQSVGKEHAS 200

Query: 189 LCAKSTTKREAEERLNEGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVINLETPTLCLVG 248
           LCAK+ +K+EAEERL+EG++K+E +F Q+   VD+LL IAK LRAMPV++LE PTLCLVG
Sbjct: 201 LCAKALSKKEAEERLSEGVEKLELVFQQQGGAVDDLLTIAKVLRAMPVVDLEMPTLCLVG 260

Query: 249 APNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGLLKRHDDDRNN 308
           APNVGKSSLV +LSTGKPEICNYPFTTRGILMGHIVLNYQ+FQVTDTPGLL+R D+DRNN
Sbjct: 261 APNVGKSSLVRILSTGKPEICNYPFTTRGILMGHIVLNYQRFQVTDTPGLLRRCDEDRNN 320

Query: 309 LEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFTGHLWLNVVSKSDLLR 368
           LEKLTLAVL+HLPTAVLYVHDLTGECGTSPSDQF IYK+MKERF  +LW++ VSK DLL 
Sbjct: 321 LEKLTLAVLTHLPTAVLYVHDLTGECGTSPSDQFQIYKEMKERFKDYLWIDAVSKCDLLG 380

Query: 369 TSPVIYATEEPHCAEQELEKYRKSGPDGAINVSVKTQEGLHELKQRVHELLKLQMAKIN 427
            SPV+YA E+    + E+ KYR+ GPD +I+VSVKT++GL+ELK +V E+L  +M KI 
Sbjct: 381 GSPVMYAKEDRSSDDAEIIKYRERGPDESIHVSVKTEQGLNELKNKVKEVLSSEMEKIQ 439


>AT1G80770.2 | Symbols: PDE318 | P-loop containing nucleoside
           triphosphate hydrolases superfamily protein |
           chr1:30355717-30357786 FORWARD LENGTH=355
          Length = 355

 Score =  518 bits (1334), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 248/343 (72%), Positives = 294/343 (85%)

Query: 85  IVMPSIDILGSALRKAKRVPPTKGIPNIAKRERNKGAKQLDALMKELAVPLRTYVENFPN 144
           +VMPSID+  SALRK+KRV PTKGI NIAKRERN+GAKQLDA MKELA+PL+ Y+E+FP 
Sbjct: 1   MVMPSIDLYASALRKSKRVQPTKGIANIAKRERNRGAKQLDAFMKELALPLKGYMESFPR 60

Query: 145 KTHLHPYERSLVELTLGDGHYEKVLRSVDDLRKRVVLVGKEQASLCAKSTTKREAEERLN 204
           K  LHPYERSL++LTLGDG YE+VL  VD LRK+V  VGKE ASLCAK+ +K+EAEERL+
Sbjct: 61  KKLLHPYERSLIDLTLGDGKYEEVLGKVDVLRKKVQSVGKEHASLCAKALSKKEAEERLS 120

Query: 205 EGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVINLETPTLCLVGAPNVGKSSLVHVLSTG 264
           EG++K+E +F Q+   VD+LL IAK LRAMPV++LE PTLCLVGAPNVGKSSLV +LSTG
Sbjct: 121 EGVEKLELVFQQQGGAVDDLLTIAKVLRAMPVVDLEMPTLCLVGAPNVGKSSLVRILSTG 180

Query: 265 KPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGLLKRHDDDRNNLEKLTLAVLSHLPTAV 324
           KPEICNYPFTTRGILMGHIVLNYQ+FQVTDTPGLL+R D+DRNNLEKLTLAVL+HLPTAV
Sbjct: 181 KPEICNYPFTTRGILMGHIVLNYQRFQVTDTPGLLRRCDEDRNNLEKLTLAVLTHLPTAV 240

Query: 325 LYVHDLTGECGTSPSDQFSIYKDMKERFTGHLWLNVVSKSDLLRTSPVIYATEEPHCAEQ 384
           LYVHDLTGECGTSPSDQF IYK+MKERF  +LW++ VSK DLL  SPV+YA E+    + 
Sbjct: 241 LYVHDLTGECGTSPSDQFQIYKEMKERFKDYLWIDAVSKCDLLGGSPVMYAKEDRSSDDA 300

Query: 385 ELEKYRKSGPDGAINVSVKTQEGLHELKQRVHELLKLQMAKIN 427
           E+ KYR+ GPD +I+VSVKT++GL+ELK +V E+L  +M KI 
Sbjct: 301 EIIKYRERGPDESIHVSVKTEQGLNELKNKVKEVLSSEMEKIQ 343


>AT1G50920.1 | Symbols:  | Nucleolar GTP-binding protein |
           chr1:18870555-18872570 FORWARD LENGTH=671
          Length = 671

 Score =  120 bits (300), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 169/371 (45%), Gaps = 35/371 (9%)

Query: 80  FQKLPIVMPSIDILGSALRKAKRVPPT---KGIPNIAKRERNKGAKQLDALMKELAVPLR 136
           F+++ +V    + +   L + +R  PT   KG      R R    +++          L 
Sbjct: 6   FKRITVVPNGKEFVDIILSRTQRQTPTVVHKGYK--INRLRQFYMRKVKYTQTNFHAKLS 63

Query: 137 TYVENFPNKTHLHPYERSLVELTLGDGHYEKVLRSVDDLRKRVVLVGKEQASLCAKSTT- 195
             ++ FP    +HP+   L+ +     HY+  L  V+  R  +  + K+   L     + 
Sbjct: 64  AIIDEFPRLEQIHPFYGDLLHVLYNKDHYKLALGQVNTARNLISKISKDYVKLLKYGDSL 123

Query: 196 ------KREAEERLNEGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVINLETPTLCLVGA 249
                 K  A  R+   LK+I    A        L  I + +  +P I+  T T+ + G 
Sbjct: 124 YRCKCLKVAALGRMCTVLKRITPSLAY-------LEQIRQHMARLPSIDPNTRTVLICGY 176

Query: 250 PNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGLLKRHDDDRNNL 309
           PNVGKSS ++ ++    ++  Y FTT+ + +GH    Y ++QV DTPG+L R  +DRN +
Sbjct: 177 PNVGKSSFMNKVTRADVDVQPYAFTTKSLFVGHTDYKYLRYQVIDTPGILDRPFEDRNII 236

Query: 310 EKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFTGHLWLNVVSKSDLLRT 369
           E  ++  L+HL  AVL+  D++G CG + + Q +++  +K  F     + V +K+DL+  
Sbjct: 237 EMCSITALAHLRAAVLFFLDISGSCGYTIAQQAALFHSIKSLFMNKPLVIVCNKTDLM-- 294

Query: 370 SPVIYATEEPHCAEQELEKYRKSGPDGA------INVSVKTQEGLHELKQRVHELL---- 419
            P+   +EE     +E++        GA      + +S  T EG+  +K    E L    
Sbjct: 295 -PMENISEEDRKLIEEMKSEAMKTAMGASEEQVLLKMSTLTDEGVMSVKNAACERLLDQR 353

Query: 420 ---KLQMAKIN 427
              K++  KIN
Sbjct: 354 VEAKMKSKKIN 364


>AT1G10300.1 | Symbols:  | Nucleolar GTP-binding protein |
           chr1:3378142-3380226 FORWARD LENGTH=687
          Length = 687

 Score =  111 bits (278), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 142/301 (47%), Gaps = 25/301 (8%)

Query: 135 LRTYVENFPNKTHLHPYERSLVELTLGDGHYEKVLRSVDDLRKRVVLVG-------KEQA 187
           L   ++ FP    + P+   L+ +     HY+  L  V+  + ++  +        K   
Sbjct: 91  LSAIIDEFPRLKEIQPFYEDLLHVLYNKDHYKLALGQVNTAKNKISKIAMDYVKLLKHGD 150

Query: 188 SLCAKSTTKREAEERLNEGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVINLETPTLCLV 247
           SL      K  A  R+   +K I    A        L  + + +  +P I+  T TL + 
Sbjct: 151 SLYRCKCLKVAALGRMCTVMKGIGPSLAY-------LEQVRQHIARLPSIDPNTRTLLIC 203

Query: 248 GAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIVLNYQKFQVTDTPGLLKRHDDDRN 307
           G PNVGKSS ++ ++     +  Y FTT+ + +GH      ++QV DTPGLL R  +DRN
Sbjct: 204 GCPNVGKSSFMNKVTRADVAVQPYAFTTKSLFLGHTDYKCLRYQVIDTPGLLDREIEDRN 263

Query: 308 NLEKLTLAVLSHLPTAVLYVHDLTGECGTSPSDQFSIYKDMKERFTGHLWLNVVSKSDLL 367
            +E  ++  L+H+  AVL+  D++G CG + + Q S++ ++K  F     + V +K+DL+
Sbjct: 264 IIELCSITALAHIRAAVLFFLDISGSCGYTIAQQASLFHNIKSVFKNKPLVIVCNKTDLM 323

Query: 368 RTSPVIYATEEPHCAEQELEKYRKSGPDGA------INVSVKTQEGLHE--LKQRVHELL 419
              P+   +EE     +E++        GA      + +S  T+EG+    L QRV   +
Sbjct: 324 ---PMENLSEEDRKLIEEMKDEAMKTEMGASEEAVILEMSTLTEEGVMSRLLDQRVAAKM 380

Query: 420 K 420
           K
Sbjct: 381 K 381


>AT5G18570.1 | Symbols: EMB269, ATOBGC, CPSAR1 | GTP1/OBG family
           protein | chr5:6171839-6174823 REVERSE LENGTH=681
          Length = 681

 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 93/223 (41%), Gaps = 29/223 (13%)

Query: 203 LNEGLKKIEEIFAQEREVVDNLLDIAKTLRAMPVINLETPTLCLVGAPNVGKSSLVHVLS 262
              G+ K+  I     E  +  LD+   L A          + +VGAPN GKS+L+ V+S
Sbjct: 349 FKSGMNKVPRIAENGEEGPEMWLDLELKLVA---------DVGIVGAPNAGKSTLLSVIS 399

Query: 263 TGKPEICNYPFTTRGILMGHIVLNYQK-FQVTDTPGLLKRHDDDRNNLEKLTLAVLSHLP 321
             +P I NYPFTT    +G +  +Y     V D PGLL    +  +    L    L H  
Sbjct: 400 AAQPTIANYPFTTLLPNLGVVSFDYDSTMVVADLPGLL----EGAHRGFGLGHEFLRHTE 455

Query: 322 TAVLYVHDLTGECGTSPSDQFSIYKDMKERFTGHL----WLNVVSKSDLLRTSPVIYATE 377
                VH + G     P  +F   +   E F+  +    ++   +K DL    P  Y   
Sbjct: 456 RCSALVHVVDGSA-PQPELEFEAVRLELELFSPEIAEKPYVVAYNKMDL----PDAY--- 507

Query: 378 EPHCAEQELEKYRKSGPDGAINVSVKTQEGLHELKQRVHELLK 420
           E     QE  + R   P     +S   +EG HE+   V+ELLK
Sbjct: 508 EKWPMFQETLRARGIEP---FCMSAVQREGTHEVISSVYELLK 547


>AT1G07615.1 | Symbols:  | GTP-binding protein Obg/CgtA |
           chr1:2342277-2344200 REVERSE LENGTH=493
          Length = 493

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 63/126 (50%), Gaps = 17/126 (13%)

Query: 228 AKTLRAMPVINLETPTLC---LVGAPNVGKSSLVHVLSTGKPEICNYPFTTRGILMGHIV 284
           A  L +  V+ LE  ++    LVG PN GKS+L+  LS  KP + +Y FTT    +G++ 
Sbjct: 287 AGLLGSEAVLILELKSIADVGLVGMPNAGKSTLLGALSRAKPRVGHYAFTTLRPNLGNV- 345

Query: 285 LNYQKFQVT--DTPGLLKRHDDDRNNLEKLTLAVLSHLP-TAVL-YVHDLT----GECGT 336
            NY  F +T  D PGL+K    +R     L    L H+  T VL YV DL     G  G 
Sbjct: 346 -NYDDFSMTVADIPGLIKGAHQNRG----LGHNFLRHIERTKVLAYVVDLASGLDGCEGL 400

Query: 337 SPSDQF 342
           +P  Q 
Sbjct: 401 TPWQQL 406