Miyakogusa Predicted Gene
- Lj1g3v3598300.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3598300.2 Non Chatacterized Hit- tr|F0W8U3|F0W8U3_9STRA
Regulator of chromosome condensation (RCC1)like
protei,28.72,1e-18,RCC1,Regulator of chromosome condensation, RCC1;
RCC1_2,Regulator of chromosome condensation, RCC1; ,CUFF.30955.2
(448 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G60870.1 | Symbols: | Regulator of chromosome condensation (... 473 e-134
AT5G60870.2 | Symbols: | Regulator of chromosome condensation (... 427 e-120
AT5G60870.3 | Symbols: | Regulator of chromosome condensation (... 333 2e-91
AT5G16040.1 | Symbols: | Regulator of chromosome condensation (... 114 1e-25
AT3G02510.1 | Symbols: | Regulator of chromosome condensation (... 110 3e-24
AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensati... 99 5e-21
AT5G12350.1 | Symbols: | Regulator of chromosome condensation (... 97 2e-20
AT3G02510.2 | Symbols: | Regulator of chromosome condensation (... 96 5e-20
AT1G65920.1 | Symbols: | Regulator of chromosome condensation (... 95 9e-20
AT5G19420.1 | Symbols: | Regulator of chromosome condensation (... 94 1e-19
AT5G19420.2 | Symbols: | Regulator of chromosome condensation (... 94 2e-19
AT5G42140.1 | Symbols: | Regulator of chromosome condensation (... 94 2e-19
AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensat... 92 1e-18
AT5G48330.2 | Symbols: | Regulator of chromosome condensation (... 87 3e-17
AT5G48330.1 | Symbols: | Regulator of chromosome condensation (... 86 4e-17
AT1G69710.1 | Symbols: | Regulator of chromosome condensation (... 85 1e-16
AT3G23270.1 | Symbols: | Regulator of chromosome condensation (... 82 6e-16
AT4G14368.1 | Symbols: | Regulator of chromosome condensation (... 82 7e-16
AT3G47660.1 | Symbols: | Regulator of chromosome condensation (... 82 1e-15
AT3G02300.1 | Symbols: | Regulator of chromosome condensation (... 80 3e-15
AT3G15430.2 | Symbols: | Regulator of chromosome condensation (... 76 4e-14
AT3G15430.1 | Symbols: | Regulator of chromosome condensation (... 76 4e-14
AT3G03790.2 | Symbols: | ankyrin repeat family protein / regula... 76 4e-14
AT3G03790.3 | Symbols: | ankyrin repeat family protein / regula... 76 4e-14
AT3G03790.1 | Symbols: | ankyrin repeat family protein / regula... 76 4e-14
AT3G55580.1 | Symbols: | Regulator of chromosome condensation (... 75 1e-13
AT3G53830.1 | Symbols: | Regulator of chromosome condensation (... 74 3e-13
AT1G27060.1 | Symbols: | Regulator of chromosome condensation (... 72 6e-13
AT5G08710.1 | Symbols: | Regulator of chromosome condensation (... 67 3e-11
AT1G19880.1 | Symbols: | Regulator of chromosome condensation (... 64 2e-10
AT3G26100.2 | Symbols: | Regulator of chromosome condensation (... 63 4e-10
AT3G26100.1 | Symbols: | Regulator of chromosome condensation (... 63 5e-10
AT5G11580.1 | Symbols: | Regulator of chromosome condensation (... 57 4e-08
>AT5G60870.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487771 REVERSE
LENGTH=445
Length = 445
Score = 473 bits (1218), Expect = e-134, Method: Compositional matrix adjust.
Identities = 237/403 (58%), Positives = 291/403 (72%), Gaps = 10/403 (2%)
Query: 46 IQLLSWGKGASGQLGGGVEEVRLYPSPVANLVI-PKSSFALSRTPGRLHHESTNKEVVEL 104
+QL SWG+GASGQLGGG+EE+R+YPSPVANL+ SF+L++TPGR+ +S++ +
Sbjct: 48 LQLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSS---FRI 104
Query: 105 GISCGLFHSSLVVDGALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDD--VRSVALGGLHS 162
GISCGLFHS L +DG LW+W E+ +FVP LNP ++ +R +ALGGLHS
Sbjct: 105 GISCGLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHS 164
Query: 163 VALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLL 222
VAL G+VFTWGYGGFGALGH VY REL+PR V+ W+ I IATSGTHTAA+TE
Sbjct: 165 VALTHQGDVFTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITE--- 221
Query: 223 DVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVSCGGFFTMALTED 282
GEL+ GGLS+P KVK L P+A+VSCGGFFTMALT++
Sbjct: 222 -SGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKE 280
Query: 283 GQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNGKVLSWXX 342
GQLWNWGANSNYELGRGD +GGW+P PVPSLE VRI QIA GGYHSLALT+ GKVLSW
Sbjct: 281 GQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGH 340
Query: 343 XXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNASDSQLGV 402
S++NQK+P IEALA + I++I+ GGS SAA+TD G+L+MWGNA D QLGV
Sbjct: 341 GGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGV 400
Query: 403 PGLPAIQSSPIEVNFLMEDDGLGPHKVLSVATGASHAMCLALR 445
PGLP IQ++P+EVNFL E+D PHKV+S++ GASHA+CL R
Sbjct: 401 PGLPEIQTTPVEVNFLTEEDECQPHKVISISIGASHALCLVSR 443
>AT5G60870.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487564 REVERSE
LENGTH=383
Length = 383
Score = 427 bits (1097), Expect = e-120, Method: Compositional matrix adjust.
Identities = 220/388 (56%), Positives = 270/388 (69%), Gaps = 17/388 (4%)
Query: 68 LYPSPVANLVI-PKSSFALSRTPGRLHHESTNKEVVELGISCGLFHSSLVVDGALWVWXX 126
+YPSPVANL+ SF+L++TPGR+ +S++ +GISCGLFHS L +DG LW+W
Sbjct: 1 MYPSPVANLLFRSDQSFSLAQTPGRIDADSSS---FRIGISCGLFHSGLTIDGDLWIWGK 57
Query: 127 XXXXXXXXXHEHPLFVPTLNPHLDD--VRSVALGGLHSVALVSPGEVFTWGYGGFGALGH 184
E+ +FVP LNP ++ +R +ALGGLHSVAL G+VFTWGYGGFGALGH
Sbjct: 58 GDGGRLGFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFTWGYGGFGALGH 117
Query: 185 AVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXX 244
VY REL+PR V+ W+ I IATSGTHTAA+TE GEL+
Sbjct: 118 KVYTRELVPRRVDDSWDCKISAIATSGTHTAAITE----SGELYMWGREEGDGRLGLGPG 173
Query: 245 XXXXHAGGLSIPCKVKELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGG 304
GGLS+P KVK L P+A+VSCGGFFTMALT++GQLWNWGANSNYELGRGD +GG
Sbjct: 174 RGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGG 233
Query: 305 WKPRPVPSLENVRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEA 364
W+P PVPSLE VRI QIA GGYHSLALT+ GKVLSW S++NQK+P IEA
Sbjct: 234 WEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEA 293
Query: 365 LATEHIIYISCGGSFSAAV-------TDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNF 417
LA + I++I+ GGS SAA+ TD G+L+MWGNA D QLGVPGLP IQ++P+EVNF
Sbjct: 294 LADKKIVFIASGGSSSAAITGWDWFLTDGGELWMWGNAKDFQLGVPGLPEIQTTPVEVNF 353
Query: 418 LMEDDGLGPHKVLSVATGASHAMCLALR 445
L E+D PHKV+S++ GASHA+CL R
Sbjct: 354 LTEEDECQPHKVISISIGASHALCLVSR 381
>AT5G60870.3 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:24485788-24487257 REVERSE
LENGTH=276
Length = 276
Score = 333 bits (853), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 166/271 (61%), Positives = 197/271 (72%), Gaps = 4/271 (1%)
Query: 175 GYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLLDVGELFFXXXXX 234
GYGGFGALGH VY REL+PR V+ W+ I IATSGTHTAA+TE GEL+
Sbjct: 8 GYGGFGALGHKVYTRELVPRRVDDSWDCKISAIATSGTHTAAITE----SGELYMWGREE 63
Query: 235 XXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNY 294
GGLS+P KVK L P+A+VSCGGFFTMALT++GQLWNWGANSNY
Sbjct: 64 GDGRLGLGPGRGPNEGGGLSVPSKVKALTVPVASVSCGGFFTMALTKEGQLWNWGANSNY 123
Query: 295 ELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXSIQ 354
ELGRGD +GGW+P PVPSLE VRI QIA GGYHSLALT+ GKVLSW S++
Sbjct: 124 ELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGHGQLGSSSLR 183
Query: 355 NQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIE 414
NQK+P IEALA + I++I+ GGS SAA+TD G+L+MWGNA D QLGVPGLP IQ++P+E
Sbjct: 184 NQKVPTEIEALADKKIVFIASGGSSSAAITDGGELWMWGNAKDFQLGVPGLPEIQTTPVE 243
Query: 415 VNFLMEDDGLGPHKVLSVATGASHAMCLALR 445
VNFL E+D PHKV+S++ GASHA+CL R
Sbjct: 244 VNFLTEEDECQPHKVISISIGASHALCLVSR 274
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 7/127 (5%)
Query: 106 ISCG-LFHSSLVVDGALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDDVR--SVALGGLHS 162
+SCG F +L +G LW W + P P L+ VR +A GG HS
Sbjct: 98 VSCGGFFTMALTKEGQLWNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHS 157
Query: 163 VALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLL 222
+AL G+V +WG+GG G LG + + +P +E + I IA+ G+ +AA+T
Sbjct: 158 LALTEEGKVLSWGHGGHGQLGSSSLRNQKVPTEIEALADKKIVFIASGGSSSAAIT---- 213
Query: 223 DVGELFF 229
D GEL+
Sbjct: 214 DGGELWM 220
>AT5G16040.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:5240860-5243308 REVERSE
LENGTH=396
Length = 396
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 175/423 (41%), Gaps = 72/423 (17%)
Query: 48 LLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGIS 107
+++WG G GQLG G +E + S V L E N V G
Sbjct: 7 VIAWGSGEDGQLGLGTDEEKELASVVDAL------------------EPFNVRSVVGGSR 48
Query: 108 CGLFHSSLVVDGALWVWXXXXXXXXXXXHEHPL-FVPTLNPHLDDVRSV--ALGGLHSVA 164
L ++ DG L+ W E P+L L +V+ V A+GG H +A
Sbjct: 49 NSL---AICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLA 105
Query: 165 LVSPGEVFTWGYGGFGALGHAVYHRE---------LLPRLVEGCWEGTIKHIATSGTHTA 215
+ G + WG +G G E ++P+ + T++ +A GTH+
Sbjct: 106 VDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRC--AQQLTVRQVAAGGTHSV 163
Query: 216 ALTE--FLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVSCGG 273
LT ++ G+ + +S+P +V+ L + ++ G
Sbjct: 164 VLTREGYVWTWGQPWPPGDIKQ-----------------ISVPVRVQGLEN-VRLIAVGA 205
Query: 274 FFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTD 333
F +AL EDG LW WG N +LG GD P PV L+++ ++ IA+GG+HS ALT+
Sbjct: 206 FHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTN 265
Query: 334 NGKVLSWXXXX--XXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYM 391
G+V W ++ +P + LA E II +SCGG+ S A+T G+++
Sbjct: 266 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFS 325
Query: 392 WGNASDSQLGVPGLPAIQSSPIEVNFLM------------EDDGLGPHKVLSVATGASHA 439
+G +LG G P+E+ + EDDG K VA G H
Sbjct: 326 FGRGDHGRLGY-GRKVTTGQPLELPIHIPPPEGRFNHTDEEDDGKWIAK--HVACGGRHT 382
Query: 440 MCL 442
+ +
Sbjct: 383 LAI 385
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 114/287 (39%), Gaps = 31/287 (10%)
Query: 165 LVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLLDV 224
+ S V WG G G LG + L +V+ ++ + ++ A+ D
Sbjct: 1 MASATSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAI----CDD 56
Query: 225 GELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELP-CPIAAVSCGGFFTMALTEDG 283
G+LF S P VK L I + GG+ +A+ + G
Sbjct: 57 GKLFTWGWNQRGTLGHPPETKTE------STPSLVKSLANVKIVQAAIGGWHCLAVDDQG 110
Query: 284 QLWNWGANSNYELGR---GDKIGGWKPR----PVPSLENVRIIQIASGGYHSLALTDNGK 336
+ + WG N + G D+ G R P + + + Q+A+GG HS+ LT G
Sbjct: 111 RAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGY 170
Query: 337 VLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNAS 396
V +W I+ +P+ ++ L E++ I+ G + A+ + G L+ WGN
Sbjct: 171 VWTWGQPWPPG----DIKQISVPVRVQGL--ENVRLIAVGAFHNLALKEDGTLWAWGNNE 224
Query: 397 DSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVATGASHAMCLA 443
QLG G +S PI V GL ++ +A G H+ L
Sbjct: 225 YGQLGT-GDTQPRSYPIPVQ------GLDDLTLVDIAAGGWHSTALT 264
>AT3G02510.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522086-524536 REVERSE
LENGTH=393
Length = 393
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 173/425 (40%), Gaps = 76/425 (17%)
Query: 48 LLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGIS 107
+++WG G GQLG G E + + V L P S ++ +S
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALE-PYSVRSV--------------------VS 45
Query: 108 CGLFHSSLVVDGALWVWXXXXXXXXXXXHEHPL-FVPTLNPHLDDVR--SVALGGLHSVA 164
++ DG ++ W E +P+ L +V+ A+GG H +A
Sbjct: 46 GSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLA 105
Query: 165 LVSPGEVFTWGYGGFGALGHAVYHREL--------------LPRLVEGCWEGTIKHIATS 210
+ G + WG +G G E+ P+L T++ +A
Sbjct: 106 VDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL-------TVRQVAAG 158
Query: 211 GTHTAALTE--FLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAA 268
GTH+ LT + G+ + +S+P +V+ L +
Sbjct: 159 GTHSVVLTREGHVWTWGQPWPPGDIKQ-----------------ISVPVRVQGLEN-VRL 200
Query: 269 VSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHS 328
++ G F +AL EDG+L WG N +LG GD P PV L+++ ++ IA+GG+HS
Sbjct: 201 IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHS 260
Query: 329 LALTDNGKVLSWXXXX--XXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDK 386
ALTD G+V W ++ +P + LA E II +SCGG+ S A+T
Sbjct: 261 TALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALTRD 320
Query: 387 GKLYMWGNASDSQLG-----VPGLP---AIQSSPIEVNFLMED-DGLGPHKVLSVATGAS 437
G+++ +G +LG G P I+ P E +F D + G S+A G
Sbjct: 321 GRIFSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEGKWSAKSIACGGR 380
Query: 438 HAMCL 442
H + +
Sbjct: 381 HTLAI 385
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 117/289 (40%), Gaps = 31/289 (10%)
Query: 165 LVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLLDV 224
+V+ + WG G G LG + +VE +++ + + ++ A+ D
Sbjct: 1 MVTATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAI----CDD 56
Query: 225 GELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELP-CPIAAVSCGGFFTMALTEDG 283
G +F +IP +VK L I + GG+ +A+ + G
Sbjct: 57 GTMFTWGWNQRGTLGHQPETKTE------NIPSRVKALANVKITQAAIGGWHCLAVDDQG 110
Query: 284 QLWNWGANSNYELGR---GDKIGGWKPR----PVPSLENVRIIQIASGGYHSLALTDNGK 336
+ + WG N + G D++G R P + + Q+A+GG HS+ LT G
Sbjct: 111 RAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGH 170
Query: 337 VLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNAS 396
V +W I+ +P+ ++ L E++ I+ G + A+ + G+L WGN
Sbjct: 171 VWTWGQPWPPG----DIKQISVPVRVQGL--ENVRLIAVGAFHNLALEEDGRLLAWGNNE 224
Query: 397 DSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVATGASHAMCLALR 445
QLG G S P+ V GL ++ +A G H+ L +
Sbjct: 225 YGQLGT-GDTQPTSHPVPVQ------GLDDLTLVDIAAGGWHSTALTDK 266
>AT5G63860.1 | Symbols: UVR8 | Regulator of chromosome condensation
(RCC1) family protein | chr5:25554821-25558587 REVERSE
LENGTH=440
Length = 440
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 159/385 (41%), Gaps = 39/385 (10%)
Query: 48 LLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGIS 107
+ SWG+G GQLG G E R P+ ++ L ++V ++
Sbjct: 36 VCSWGRGEDGQLGHGDAEDRPSPTQLSAL--------------------DGHQIVS--VT 73
Query: 108 CGLFHSSLVVDGALWV--WXXXXXXXXXXXHEHPLFVPTLNPHLDDVR--SVALGGLHSV 163
CG H+ + V W + LF P L +R +A G H +
Sbjct: 74 CGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCL 133
Query: 164 ALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLLD 223
A+ GEV +WG G LG L+P+ ++ IK +A HTAA+TE
Sbjct: 134 AVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTED--- 190
Query: 224 VGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPC-PIAAVSCGGFFTMALTED 282
G+L+ +P +V ++ V+CG T++++
Sbjct: 191 -GDLYGWGWGRYGNLGLGDRTDRL-------VPERVTSTGGEKMSMVACGWRHTISVSYS 242
Query: 283 GQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNGKVLSWXX 342
G L+ +G + +LG GD P + +L N I QI+ G H++ALT +GK+ W
Sbjct: 243 GALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGW 302
Query: 343 XXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNASDSQLGV 402
+ +Q P+ + + ++ +SCG + AVT++ ++ WG ++ QLG+
Sbjct: 303 NKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGI 362
Query: 403 PGLPAIQSSPIEVNFLMEDDGLGPH 427
G ++ P + L D G H
Sbjct: 363 -GESVDRNFPKIIEALSVDGASGQH 386
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 135/311 (43%), Gaps = 22/311 (7%)
Query: 139 PLFVPTLNPHLDDVRSVALGGLHSVALVSPG-EVFTWGYGGFGALGHAVYHRELLPRLVE 197
P + L+ H + SV G H+VA G EV++WG+G FG LGH P ++
Sbjct: 58 PTQLSALDGH--QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIK 115
Query: 198 GCWEGTIKHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPC 257
IK IA +H A+T GE+ +P
Sbjct: 116 ALHGIRIKQIACGDSHCLAVTM----EGEVQSWGRNQNGQLGLGDTEDSL-------VPQ 164
Query: 258 KVKELP-CPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENV 316
K++ I V+ G T A+TEDG L+ WG LG GD+ P V S
Sbjct: 165 KIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGE 224
Query: 317 RIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCG 376
++ +A G H+++++ +G + ++ +++ IP +EAL+ I IS G
Sbjct: 225 KMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG 284
Query: 377 GSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVATGA 436
+ A+T GKLY WG Q+GV G Q SP++V F DD KV+ V+ G
Sbjct: 285 WRHTMALTSDGKLYGWGWNKFGQVGV-GNNLDQCSPVQVRF--PDD----QKVVQVSCGW 337
Query: 437 SHAMCLALRES 447
H + + R +
Sbjct: 338 RHTLAVTERNN 348
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 11/248 (4%)
Query: 155 VALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHT 214
++ G HSVAL+S V +WG G G LGH P + I + HT
Sbjct: 20 ISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHT 79
Query: 215 AALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKEL-PCPIAAVSCGG 273
A ++ ++V + ++ L P +K L I ++CG
Sbjct: 80 VAYSQSGMEVYSWGWGDFGRLGHG----------NSSDLFTPLPIKALHGIRIKQIACGD 129
Query: 274 FFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTD 333
+A+T +G++ +WG N N +LG GD P+ + + E +RI +A+G H+ A+T+
Sbjct: 130 SHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE 189
Query: 334 NGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWG 393
+G + W ++ +P + + E + ++CG + +V+ G LY +G
Sbjct: 190 DGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTISVSYSGALYTYG 249
Query: 394 NASDSQLG 401
+ QLG
Sbjct: 250 WSKYGQLG 257
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 258 KVKELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVR 317
+V P + +S G ++AL + +WG + +LG GD P + +L+ +
Sbjct: 9 EVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQ 68
Query: 318 IIQIASGGYHSLALTDNG-KVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCG 376
I+ + G H++A + +G +V SW + + P+ I+AL I I+CG
Sbjct: 69 IVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG 128
Query: 377 GSFSAAVTDKGKLYMWGNASDSQLGV 402
S AVT +G++ WG + QLG+
Sbjct: 129 DSHCLAVTMEGEVQSWGRNQNGQLGL 154
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 116/301 (38%), Gaps = 47/301 (15%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
++ SWG+ +GQLG G E L P + +F R +++ +
Sbjct: 140 EVQSWGRNQNGQLGLGDTEDSLVPQKI-------QAFEGIR--------------IKM-V 177
Query: 107 SCGLFHSSLVV-DGALWVWXXXXXXXXXXXHEHPLFVP--TLNPHLDDVRSVALGGLHSV 163
+ G H++ V DG L+ W VP + + + VA G H++
Sbjct: 178 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHTI 237
Query: 164 ALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLLD 223
++ G ++T+G+ +G LGH L+P +E I I+ HT ALT
Sbjct: 238 SVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD--- 294
Query: 224 VGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCP----IAAVSCGGFFTMAL 279
G+L+ G C ++ P + VSCG T+A+
Sbjct: 295 -GKLY----------GWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCGWRHTLAV 343
Query: 280 TEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNGKVLS 339
TE ++ WG +N +LG G+ + R P + + ASG + + D S
Sbjct: 344 TERNNVFAWGRGTNGQLGIGESV----DRNFPKIIEALSVDGASGQHIESSNIDPSSGKS 399
Query: 340 W 340
W
Sbjct: 400 W 400
>AT5G12350.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:3995789-4000545 FORWARD LENGTH=1075
Length = 1075
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 151/365 (41%), Gaps = 46/365 (12%)
Query: 49 LSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGISC 108
SWG+ + G+LG GV+ +N+ PK AL+ +TN E+V +C
Sbjct: 330 FSWGEESEGRLGHGVD---------SNIQQPKLIDALN---------TTNIELV----AC 367
Query: 109 GLFHS-SLVVDGALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDD---VRSVALGGLHSVA 164
G FHS ++ + G L+ W +E +VP L + V S+A G H+
Sbjct: 368 GEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAV 427
Query: 165 LVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLL-- 222
+ S G++FT+G G FG LGH +PR V+ A HTAA+ E ++
Sbjct: 428 VTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 487
Query: 223 ------DVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCP-IAAVSCGGFF 275
G+LF +P V L P V+CG
Sbjct: 488 SSSSNCSSGKLFTWGDGDKGRLGHGNKEPKL-------VPTCVAALVEPNFCQVACGHSL 540
Query: 276 TMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNG 335
T+ALT G ++ G+ +LG G R L + +IA G YH LT
Sbjct: 541 TVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLTSRT 600
Query: 336 KVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNA 395
+V +W + ++ P ++E+L + + I+CG +F+AAV ++ W +
Sbjct: 601 EVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVC----IHRWASG 656
Query: 396 SDSQL 400
D +
Sbjct: 657 MDQSM 661
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 29/267 (10%)
Query: 151 DVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATS 210
DV+++A GG H+V + GE F+WG G LGH V P+L++ I+ +A
Sbjct: 309 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACG 368
Query: 211 GTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLS--IPCKVKEL--PCPI 266
H+ A+T G+L+ H +S +P +V L +
Sbjct: 369 EFHSCAVTL----SGDLY---------TWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHV 415
Query: 267 AAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGY 326
++++CG + T +T GQL+ +G + LG GDK + PR V SL+ +R ++ A G +
Sbjct: 416 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVW 475
Query: 327 HSLALTD------------NGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYIS 374
H+ A+ + +GK+ +W + + + +P + AL + ++
Sbjct: 476 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVA 535
Query: 375 CGGSFSAAVTDKGKLYMWGNASDSQLG 401
CG S + A+T G +Y G+ QLG
Sbjct: 536 CGHSLTVALTTSGHVYTMGSPVYGQLG 562
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 144/371 (38%), Gaps = 44/371 (11%)
Query: 105 GISCGLFHSSLVV-DGALWVWXXXXXXX----XXXXHEHPLFVPTLNPHLDDVRSVALGG 159
I+CG H+ LV G + W + P + LN ++ VA G
Sbjct: 312 NIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALN--TTNIELVACGE 369
Query: 160 LHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGT-IKHIATSGTHTAALT 218
HS A+ G+++TWG G FG LGH +P+ V EG + IA HTA +T
Sbjct: 370 FHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVT 429
Query: 219 EFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELP-CPIAAVSCGGFFTM 277
G+LF + IP +V L +CG + T
Sbjct: 430 S----AGQLF-------TFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTA 478
Query: 278 ALTE------------DGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGG 325
A+ E G+L+ WG LG G+K P V +L Q+A G
Sbjct: 479 AVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGH 538
Query: 326 YHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIE-ALATEHIIYISCGGSFSAAVT 384
++ALT +G V + S + K P +E L + I+CG A +T
Sbjct: 539 SLTVALTTSGHVYTM-GSPVYGQLGNSHADGKTPNRVEGKLHKSFVEEIACGAYHVAVLT 597
Query: 385 DKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDD----GLGPHKVLSV-----ATG 435
+ ++Y WG S+ +LG G ++SP V L + G + +V A+G
Sbjct: 598 SRTEVYTWGKGSNGRLG-HGDVDDRNSPTLVESLKDKQVKSIACGTNFTAAVCIHRWASG 656
Query: 436 ASHAMCLALRE 446
+MC R+
Sbjct: 657 MDQSMCSGCRQ 667
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 122/304 (40%), Gaps = 54/304 (17%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
L +WGKG G LG G E V++ V + +F L +H S I
Sbjct: 380 DLYTWGKGDFGVLGHGNE--------VSHWVPKRVNFLLE----GIHVSS---------I 418
Query: 107 SCGLFHSSLVVD-GALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDDVRSV--ALGGLHSV 163
+CG +H+++V G L+ + + +F+P L +R+V A G H+
Sbjct: 419 ACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGVWHTA 478
Query: 164 ALVS------------PGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSG 211
A+V G++FTWG G G LGH +L+P V E +A
Sbjct: 479 AVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQVACGH 538
Query: 212 THTAALTE--FLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKV--KELPCPIA 267
+ T ALT + +G + HA G P +V K +
Sbjct: 539 SLTVALTTSGHVYTMGSPVY-------------GQLGNSHADG-KTPNRVEGKLHKSFVE 584
Query: 268 AVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYH 327
++CG + LT +++ WG SN LG GD P V SL++ ++ IA G
Sbjct: 585 EIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNSPTLVESLKDKQVKSIACGTNF 644
Query: 328 SLAL 331
+ A+
Sbjct: 645 TAAV 648
>AT3G02510.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:522524-524536 REVERSE
LENGTH=310
Length = 310
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 126/289 (43%), Gaps = 15/289 (5%)
Query: 137 EHPLFVPTLNPHLDDVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHR-ELLPRL 195
E V L P+ VRSV G +S+A+ G +FTWG+ G LGH + E +P
Sbjct: 27 EWACVVEALEPY--SVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSR 84
Query: 196 VEGCWEGTIKHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSI 255
V+ I A G H A+ D G + I
Sbjct: 85 VKALANVKITQAAIGGWHCLAVD----DQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDI 140
Query: 256 PCKVKELP-CPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLE 314
+ P + V+ GG ++ LT +G +W WG + G +I P V LE
Sbjct: 141 VIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWG--QPWPPGDIKQIS--VPVRVQGLE 196
Query: 315 NVRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYIS 374
NVR+I A G +H+LAL ++G++L+W Q P+ ++ L ++ I+
Sbjct: 197 NVRLI--AVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIA 254
Query: 375 CGGSFSAAVTDKGKLYMWGNASDSQLGV-PGLPAIQSSPIEVNFLMEDD 422
GG S A+TDKG++Y WG +LG+ + + P +VN L E+D
Sbjct: 255 AGGWHSTALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEED 303
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 137/347 (39%), Gaps = 67/347 (19%)
Query: 48 LLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGIS 107
+++WG G GQLG G E + + V L P S ++ +S
Sbjct: 7 IIAWGSGEDGQLGIGTNEEKEWACVVEALE-PYSVRSV--------------------VS 45
Query: 108 CGLFHSSLVVDGALWVWXXXXXXXXXXXHEHPL-FVPTLNPHLDDVR--SVALGGLHSVA 164
++ DG ++ W E +P+ L +V+ A+GG H +A
Sbjct: 46 GSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKITQAAIGGWHCLA 105
Query: 165 LVSPGEVFTWGYGGFGALGHAVYHREL--------------LPRLVEGCWEGTIKHIATS 210
+ G + WG +G G E+ P+L T++ +A
Sbjct: 106 VDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPKL-------TVRQVAAG 158
Query: 211 GTHTAALTE--FLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAA 268
GTH+ LT + G+ + +S+P +V+ L +
Sbjct: 159 GTHSVVLTREGHVWTWGQPWPPGDIKQ-----------------ISVPVRVQGLEN-VRL 200
Query: 269 VSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHS 328
++ G F +AL EDG+L WG N +LG GD P PV L+++ ++ IA+GG+HS
Sbjct: 201 IAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVQGLDDLTLVDIAAGGWHS 260
Query: 329 LALTDNGKVLSWXXXX--XXXXXXXSIQNQKIPMVIEALATEHIIYI 373
ALTD G+V W ++ +P + LA E II +
Sbjct: 261 TALTDKGEVYGWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEEDIIQV 307
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 85/195 (43%), Gaps = 22/195 (11%)
Query: 257 CKVKEL-PCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWK-PRPVPSLE 314
C V+ L P + +V G ++A+ +DG ++ WG N LG + P V +L
Sbjct: 30 CVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALA 89
Query: 315 NVRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQ-----KIPMVIEALATEH 369
NV+I Q A GG+H LA+ D G+ +W ++++ + +VI
Sbjct: 90 NVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRDIVIPKRCAPK 149
Query: 370 II--YISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPH 427
+ ++ GG+ S +T +G ++ WG Q PG S P+ V L
Sbjct: 150 LTVRQVAAGGTHSVVLTREGHVWTWG-----QPWPPGDIKQISVPVRVQGL--------E 196
Query: 428 KVLSVATGASHAMCL 442
V +A GA H + L
Sbjct: 197 NVRLIAVGAFHNLAL 211
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 1/156 (0%)
Query: 288 WGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNGKVLSWX-XXXXX 346
WG+ + +LG G V +LE + + SG +SLA+ D+G + +W
Sbjct: 10 WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69
Query: 347 XXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLP 406
+ + IP ++ALA I + GG AV D+G+ Y WG Q G L
Sbjct: 70 LGHQPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLK 129
Query: 407 AIQSSPIEVNFLMEDDGLGPHKVLSVATGASHAMCL 442
P+ + ++ V VA G +H++ L
Sbjct: 130 DEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVL 165
>AT1G65920.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:24525267-24529204 REVERSE LENGTH=1006
Length = 1006
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 135/308 (43%), Gaps = 36/308 (11%)
Query: 151 DVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATS 210
DV+S++LG H+ + GEVF WG G G LG V P+ VE + ++ +A S
Sbjct: 293 DVQSISLGAKHAALVTRQGEVFCWGNGNSGKLGLKVNIDIDHPKRVESLEDVAVRSVACS 352
Query: 211 GTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKEL---PCPIA 267
T A+TE GEL+ +G + K+ ++ +
Sbjct: 353 DHQTCAVTE----SGELYLWGIDGGTIE----------QSGSQFLTRKISDVLGGSLTVL 398
Query: 268 AVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYH 327
+V+CG + T +T GQL+ +G+ + LG G KP+ V SL +++I ++ G +H
Sbjct: 399 SVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWH 458
Query: 328 SLALTDN------------GKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISC 375
+ A+ + GK+ +W + + +P + L I +SC
Sbjct: 459 TAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSC 518
Query: 376 GGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVATG 435
G + + A++ G +Y G++ QLG P ++ VN ++ + L V +A+G
Sbjct: 519 GWTLTVALSISGTVYTMGSSIHGQLGCP-----RAKDKSVNVVLGN--LTRQFVKDIASG 571
Query: 436 ASHAMCLA 443
+ H L
Sbjct: 572 SHHVAVLT 579
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 134/348 (38%), Gaps = 40/348 (11%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
++ WG G SG+LG V +P V +L ++V +
Sbjct: 312 EVFCWGNGNSGKLGLKVNIDIDHPKRVESL----------------------EDVAVRSV 349
Query: 107 SCGLFHSSLVVD-GALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDD-------VRSVALG 158
+C + V + G L++W + L + D V SVA G
Sbjct: 350 ACSDHQTCAVTESGELYLWGIDGGTIEQSGSQF------LTRKISDVLGGSLTVLSVACG 403
Query: 159 GLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALT 218
H+ + S G++FT+G G FG LGH P+ VE + ++ HTAA+
Sbjct: 404 AWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKVISVSCGPWHTAAIV 463
Query: 219 EFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLS--IPCKVKEL-PCPIAAVSCGGFF 275
E D + + HA +P V EL VSCG
Sbjct: 464 ETAND-RKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTL 522
Query: 276 TMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNG 335
T+AL+ G ++ G++ + +LG + +L + IASG +H LT G
Sbjct: 523 TVALSISGTVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQFVKDIASGSHHVAVLTSFG 582
Query: 336 KVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAV 383
V +W ++++ P+++E L + I+CG + +AA+
Sbjct: 583 NVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRLVESIACGLNLTAAI 630
>AT5G19420.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552866 REVERSE LENGTH=1105
Length = 1105
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 150/365 (41%), Gaps = 46/365 (12%)
Query: 49 LSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGISC 108
SWG+ + G+LG GV+ +N+ PK AL+ +TN E+V +C
Sbjct: 334 FSWGEESEGRLGHGVD---------SNVQHPKLIDALN---------TTNIELV----AC 371
Query: 109 GLFHS-SLVVDGALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDD---VRSVALGGLHSVA 164
G +HS ++ + G L+ W +E +VP L + V S+A G H+
Sbjct: 372 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 431
Query: 165 LVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLL-- 222
+ S G++FT+G G FG LGH +PR V+ A HTAA+ E ++
Sbjct: 432 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 491
Query: 223 ------DVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCP-IAAVSCGGFF 275
G+LF +P V L P V+CG
Sbjct: 492 SSSSNCSSGKLFTWGDGDKSRLGHGDKEPKL-------VPTCVAALVEPNFCQVACGHSL 544
Query: 276 TMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNG 335
T+ALT G ++ G+ +LG G R L + +IA G YH LT
Sbjct: 545 TVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRT 604
Query: 336 KVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNA 395
+V +W ++ P ++E+L + + I+CG +F+AAV L+ W +
Sbjct: 605 EVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC----LHKWASG 660
Query: 396 SDSQL 400
D +
Sbjct: 661 MDQSM 665
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 36/311 (11%)
Query: 151 DVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATS 210
DV+++A GG H+V + GE F+WG G LGH V P+L++ I+ +A
Sbjct: 313 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACG 372
Query: 211 GTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLS--IPCKVKELP--CPI 266
H+ A+T G+L+ H +S +P +V L +
Sbjct: 373 EYHSCAVTL----SGDLY---------TWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHV 419
Query: 267 AAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGY 326
++++CG + T +T GQL+ +G + LG GD+ + PR V SL+ +R ++ A G +
Sbjct: 420 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 479
Query: 327 HSLALTD------------NGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYIS 374
H+ A+ + +GK+ +W + + +P + AL + ++
Sbjct: 480 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVA 539
Query: 375 CGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVAT 434
CG S + A+T G +Y G+ QLG P A P V D L V +A
Sbjct: 540 CGHSLTVALTTSGHVYTMGSPVYGQLGNPH--ADGKVPTRV-----DGKLHKSFVEEIAC 592
Query: 435 GASHAMCLALR 445
GA H L R
Sbjct: 593 GAYHVAVLTSR 603
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/360 (26%), Positives = 145/360 (40%), Gaps = 43/360 (11%)
Query: 105 GISCGLFHSSLVV-DGALWVWXXXXXXX----XXXXHEHPLFVPTLNPHLDDVRSVALGG 159
I+CG H+ LV G + W +HP + LN ++ VA G
Sbjct: 316 NIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALN--TTNIELVACGE 373
Query: 160 LHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGT-IKHIATSGTHTAALT 218
HS A+ G+++TWG G FG LGH +P+ V EG + IA HTA +T
Sbjct: 374 YHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVT 433
Query: 219 EFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELP-CPIAAVSCGGFFTM 277
G+LF + IP +V L +CG + T
Sbjct: 434 S----AGQLF-------TFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTA 482
Query: 278 ALTE------------DGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGG 325
A+ E G+L+ WG LG GDK P V +L Q+A G
Sbjct: 483 AVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGH 542
Query: 326 YHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIE-ALATEHIIYISCGGSFSAAVT 384
++ALT +G V + + K+P ++ L + I+CG A +T
Sbjct: 543 SLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRVDGKLHKSFVEEIACGAYHVAVLT 601
Query: 385 DKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVATGASH--AMCL 442
+ ++Y WG S+ +LG G ++SP V + L +V S+A G++ A+CL
Sbjct: 602 SRTEVYTWGKGSNGRLG-HGDADDRNSPTLV------ESLKDKQVKSIACGSNFTAAVCL 654
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 121/304 (39%), Gaps = 54/304 (17%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
L +WGKG G LG G E V++ V + +F + +H S I
Sbjct: 384 DLYTWGKGDFGILGHGNE--------VSHWVPKRVNFLME----GIHVSS---------I 422
Query: 107 SCGLFHSSLVVD-GALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDDVRSV--ALGGLHSV 163
+CG +H+++V G L+ + +F+P L +R+V A G H+
Sbjct: 423 ACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTA 482
Query: 164 ALVS------------PGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSG 211
A+V G++FTWG G LGH +L+P V E +A
Sbjct: 483 AVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGH 542
Query: 212 THTAALTE--FLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKV--KELPCPIA 267
+ T ALT + +G + HA G +P +V K +
Sbjct: 543 SLTVALTTSGHVYTMGSPVY-------------GQLGNPHADG-KVPTRVDGKLHKSFVE 588
Query: 268 AVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYH 327
++CG + LT +++ WG SN LG GD P V SL++ ++ IA G
Sbjct: 589 EIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNF 648
Query: 328 SLAL 331
+ A+
Sbjct: 649 TAAV 652
>AT5G19420.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:6547945-6552981 REVERSE LENGTH=1139
Length = 1139
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 150/365 (41%), Gaps = 46/365 (12%)
Query: 49 LSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGISC 108
SWG+ + G+LG GV+ +N+ PK AL+ +TN E+V +C
Sbjct: 368 FSWGEESEGRLGHGVD---------SNVQHPKLIDALN---------TTNIELV----AC 405
Query: 109 GLFHS-SLVVDGALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDD---VRSVALGGLHSVA 164
G +HS ++ + G L+ W +E +VP L + V S+A G H+
Sbjct: 406 GEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAV 465
Query: 165 LVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLL-- 222
+ S G++FT+G G FG LGH +PR V+ A HTAA+ E ++
Sbjct: 466 VTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGS 525
Query: 223 ------DVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCP-IAAVSCGGFF 275
G+LF +P V L P V+CG
Sbjct: 526 SSSSNCSSGKLFTWGDGDKSRLGHGDKEPKL-------VPTCVAALVEPNFCQVACGHSL 578
Query: 276 TMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNG 335
T+ALT G ++ G+ +LG G R L + +IA G YH LT
Sbjct: 579 TVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRT 638
Query: 336 KVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNA 395
+V +W ++ P ++E+L + + I+CG +F+AAV L+ W +
Sbjct: 639 EVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNFTAAVC----LHKWASG 694
Query: 396 SDSQL 400
D +
Sbjct: 695 MDQSM 699
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 136/311 (43%), Gaps = 36/311 (11%)
Query: 151 DVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATS 210
DV+++A GG H+V + GE F+WG G LGH V P+L++ I+ +A
Sbjct: 347 DVQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACG 406
Query: 211 GTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLS--IPCKVKELP--CPI 266
H+ A+T G+L+ H +S +P +V L +
Sbjct: 407 EYHSCAVTL----SGDLY---------TWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHV 453
Query: 267 AAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGY 326
++++CG + T +T GQL+ +G + LG GD+ + PR V SL+ +R ++ A G +
Sbjct: 454 SSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVW 513
Query: 327 HSLALTD------------NGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYIS 374
H+ A+ + +GK+ +W + + +P + AL + ++
Sbjct: 514 HTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVA 573
Query: 375 CGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVAT 434
CG S + A+T G +Y G+ QLG P A P V D L V +A
Sbjct: 574 CGHSLTVALTTSGHVYTMGSPVYGQLGNPH--ADGKVPTRV-----DGKLHKSFVEEIAC 626
Query: 435 GASHAMCLALR 445
GA H L R
Sbjct: 627 GAYHVAVLTSR 637
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 134/323 (41%), Gaps = 38/323 (11%)
Query: 137 EHPLFVPTLNPHLDDVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLV 196
+HP + LN ++ VA G HS A+ G+++TWG G FG LGH +P+ V
Sbjct: 387 QHPKLIDALN--TTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRV 444
Query: 197 EGCWEGT-IKHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSI 255
EG + IA HTA +T G+LF + I
Sbjct: 445 NFLMEGIHVSSIACGPYHTAVVTS----AGQLF-------TFGDGTFGVLGHGDRKSVFI 493
Query: 256 PCKVKELP-CPIAAVSCGGFFTMALTE------------DGQLWNWGANSNYELGRGDKI 302
P +V L +CG + T A+ E G+L+ WG LG GDK
Sbjct: 494 PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKE 553
Query: 303 GGWKPRPVPSLENVRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVI 362
P V +L Q+A G ++ALT +G V + + K+P +
Sbjct: 554 PKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHA-DGKVPTRV 612
Query: 363 E-ALATEHIIYISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMED 421
+ L + I+CG A +T + ++Y WG S+ +LG G ++SP V
Sbjct: 613 DGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLG-HGDADDRNSPTLV------ 665
Query: 422 DGLGPHKVLSVATGASH--AMCL 442
+ L +V S+A G++ A+CL
Sbjct: 666 ESLKDKQVKSIACGSNFTAAVCL 688
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 121/304 (39%), Gaps = 54/304 (17%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
L +WGKG G LG G E V++ V + +F + +H S I
Sbjct: 418 DLYTWGKGDFGILGHGNE--------VSHWVPKRVNFLME----GIHVSS---------I 456
Query: 107 SCGLFHSSLVVD-GALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDDVRSV--ALGGLHSV 163
+CG +H+++V G L+ + +F+P L +R+V A G H+
Sbjct: 457 ACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTA 516
Query: 164 ALVS------------PGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSG 211
A+V G++FTWG G LGH +L+P V E +A
Sbjct: 517 AVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGH 576
Query: 212 THTAALTE--FLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKV--KELPCPIA 267
+ T ALT + +G + HA G +P +V K +
Sbjct: 577 SLTVALTTSGHVYTMGSPVY-------------GQLGNPHADG-KVPTRVDGKLHKSFVE 622
Query: 268 AVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYH 327
++CG + LT +++ WG SN LG GD P V SL++ ++ IA G
Sbjct: 623 EIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNSPTLVESLKDKQVKSIACGSNF 682
Query: 328 SLAL 331
+ A+
Sbjct: 683 TAAV 686
>AT5G42140.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr5:16837547-16841640 REVERSE LENGTH=1073
Length = 1073
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 132/313 (42%), Gaps = 39/313 (12%)
Query: 151 DVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATS 210
DV +A G H+ + GEVFTWG G LGH + P+L+E +I +A
Sbjct: 273 DVHHIACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACG 332
Query: 211 GTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLS--IPCKVKELPCP--- 265
HT A+T GE++ H +S IP K + P
Sbjct: 333 EFHTCAVTM----TGEIY-------TWGDGTHNAGLLGHGTDVSHWIP---KRISGPLEG 378
Query: 266 --IAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIAS 323
IA+VSCG + T +T GQL+ +G + LG GDK + PR V SL +R I +A
Sbjct: 379 LQIASVSCGPWHTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVAC 438
Query: 324 GGYHSLALTD-----------NGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIY 372
G +H+ A+ + +GK+ +W + + P + AL
Sbjct: 439 GVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHR 498
Query: 373 ISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSV 432
++CG S + +T GK+Y G+ QLG P ++ L+ED L V +
Sbjct: 499 VACGHSLTVGLTTSGKVYTMGSTVYGQLGNPNADG------KLPCLVEDK-LTKDCVEEI 551
Query: 433 ATGASHAMCLALR 445
A GA H L R
Sbjct: 552 ACGAYHVAVLTSR 564
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 140/350 (40%), Gaps = 41/350 (11%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
++ +WG+ + G+LG G+ + P + +L F +
Sbjct: 292 EVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDF----------------------V 329
Query: 107 SCGLFHS-SLVVDGALWVWXXXXXXXXXXXHEHPL--FVPT-LNPHLD--DVRSVALGGL 160
+CG FH+ ++ + G ++ W H + ++P ++ L+ + SV+ G
Sbjct: 330 ACGEFHTCAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPW 389
Query: 161 HSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEF 220
H+ + S G++FT+G G FG LGH PR VE +A H AA+ E
Sbjct: 390 HTALITSTGQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHAAAIVEV 449
Query: 221 LLD-------VGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVSCGG 273
++ G+LF L C + V+CG
Sbjct: 450 IVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPR------LKPTCVSALIDHTFHRVACGH 503
Query: 274 FFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTD 333
T+ LT G+++ G+ +LG + G L + +IA G YH LT
Sbjct: 504 SLTVGLTTSGKVYTMGSTVYGQLGNPNADGKLPCLVEDKLTKDCVEEIACGAYHVAVLTS 563
Query: 334 NGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAV 383
+V +W ++++K P +++AL H+ I+CG +F+AA+
Sbjct: 564 RNEVFTWGKGANGRLGHGDVEDRKAPTLVDALKERHVKNIACGSNFTAAI 613
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 152/360 (42%), Gaps = 44/360 (12%)
Query: 106 ISCGLFHSSLVV-DGALWVWXXXXXXXXXXXHEHPLFVPTLNPHL--DDVRSVALGGLHS 162
I+CG+ H++LV G ++ W + P L L + VA G H+
Sbjct: 277 IACGVKHAALVSRQGEVFTWGEASGGRLGHGMGKDVTGPQLIESLAATSIDFVACGEFHT 336
Query: 163 VALVSPGEVFTWGYG--GFGALGHAVYHRELLPRLVEGCWEG-TIKHIATSGTHTAALTE 219
A+ GE++TWG G G LGH +P+ + G EG I ++ HTA +T
Sbjct: 337 CAVTMTGEIYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITS 396
Query: 220 FLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSI--PCKVKELP-CPIAAVSCGGFFT 276
G+LF H ++ P +V+ L AV+CG +
Sbjct: 397 ----TGQLF---------TFGDGTFGVLGHGDKETVFYPREVESLSGLRTIAVACGVWHA 443
Query: 277 MALTE-----------DGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGG 325
A+ E G+L+ WG LG GDK KP V +L + ++A G
Sbjct: 444 AAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFHRVACGH 503
Query: 326 YHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIY-ISCGGSFSAAVT 384
++ LT +GKV + + + K+P ++E T+ + I+CG A +T
Sbjct: 504 SLTVGLTTSGKVYTMGSTVYGQLGNPNA-DGKLPCLVEDKLTKDCVEEIACGAYHVAVLT 562
Query: 385 DKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVATGASH--AMCL 442
+ +++ WG ++ +LG G + +P V+ L E V ++A G++ A+CL
Sbjct: 563 SRNEVFTWGKGANGRLG-HGDVEDRKAPTLVDALKE------RHVKNIACGSNFTAAICL 615
>AT1G76950.1 | Symbols: PRAF1 | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:28906952-28911325 FORWARD LENGTH=1103
Length = 1103
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 137/321 (42%), Gaps = 41/321 (12%)
Query: 106 ISCGLFHSSLVV-DGALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDDVRSV---ALGGLH 161
I+CG+ H++ V G ++ W +F P L L SV A G H
Sbjct: 286 IACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFH 345
Query: 162 SVALVSPGEVFTWGYG--GFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGT---HTAA 216
+ A+ GE++TWG G G LGH +P+ + G EG H+A+ HTA
Sbjct: 346 TCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGL--HVASVSCGPWHTAL 403
Query: 217 LTEF--LLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELP-CPIAAVSCGG 273
+T + L G+ F + P +V+ L AVSCG
Sbjct: 404 ITSYGRLFTFGDGTFGVLGHGDKET-------------VQYPREVESLSGLRTIAVSCGV 450
Query: 274 FFTMALTE------------DGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQI 321
+ T A+ E G+L+ WG LG GDK KP VP+L + +I
Sbjct: 451 WHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKI 510
Query: 322 ASGGYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIE-ALATEHIIYISCGGSFS 380
A G ++ LT +G+V + + K+P ++E LA+E + ISCG
Sbjct: 511 ACGHSLTVGLTTSGQVFTMGSTVYGQLGNLQT-DGKLPCLVEDKLASEFVEEISCGAYHV 569
Query: 381 AAVTDKGKLYMWGNASDSQLG 401
AA+T + ++Y WG ++ +LG
Sbjct: 570 AALTSRNEVYTWGKGANGRLG 590
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 148/353 (41%), Gaps = 45/353 (12%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
++ +WG+ + G+LG G+ + +P V +L S V+ +
Sbjct: 301 EIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSS--------------------VDF-V 339
Query: 107 SCGLFHS-SLVVDGALWVWXXXXXXXXXXXHEHPL--FVPT-LNPHLD--DVRSVALGGL 160
+CG FH+ ++ + G L+ W H + ++P + L+ V SV+ G
Sbjct: 340 ACGEFHTCAVTLAGELYTWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLHVASVSCGPW 399
Query: 161 HSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGT--HTAALT 218
H+ + S G +FT+G G FG LGH PR VE ++ IA S HTAA+
Sbjct: 400 HTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESL--SGLRTIAVSCGVWHTAAVV 457
Query: 219 EFLLD--------VGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVS 270
E ++ G+LF L C + ++
Sbjct: 458 EIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPR------LKPTCVPALIDYNFHKIA 511
Query: 271 CGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLA 330
CG T+ LT GQ++ G+ +LG G L + + +I+ G YH A
Sbjct: 512 CGHSLTVGLTTSGQVFTMGSTVYGQLGNLQTDGKLPCLVEDKLASEFVEEISCGAYHVAA 571
Query: 331 LTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAV 383
LT +V +W ++++K+P ++EAL H+ YI+CG +++AA+
Sbjct: 572 LTSRNEVYTWGKGANGRLGHGDLEDRKVPTIVEALKDRHVKYIACGSNYTAAI 624
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 128/312 (41%), Gaps = 35/312 (11%)
Query: 151 DVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEG-CWEGTIKHIAT 209
DV +A G H+ + GE+FTWG G LGH + PRLVE ++ +A
Sbjct: 282 DVHQIACGVRHAAFVTRQGEIFTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVAC 341
Query: 210 SGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLS--IPCKV--KELPCP 265
HT A+T GEL+ H +S IP ++
Sbjct: 342 GEFHTCAVTL----AGELY-------TWGDGTHNVGLLGHGSDISHWIPKRIAGSLEGLH 390
Query: 266 IAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGG 325
+A+VSCG + T +T G+L+ +G + LG GDK PR V SL +R I ++ G
Sbjct: 391 VASVSCGPWHTALITSYGRLFTFGDGTFGVLGHGDKETVQYPREVESLSGLRTIAVSCGV 450
Query: 326 YHSLALTD------------NGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYI 373
+H+ A+ + +GK+ +W + P + AL + I
Sbjct: 451 WHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFHKI 510
Query: 374 SCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVA 433
+CG S + +T G+++ G+ QLG L P V +D L V ++
Sbjct: 511 ACGHSLTVGLTTSGQVFTMGSTVYGQLG--NLQTDGKLPCLV-----EDKLASEFVEEIS 563
Query: 434 TGASHAMCLALR 445
GA H L R
Sbjct: 564 CGAYHVAALTSR 575
>AT5G48330.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=454
Length = 454
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 256 PCKVKELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGR---GDKIGGWKPRPVPS 312
P V LP I+++S G + ++A+T G++W WG N +LGR + +P+ V
Sbjct: 74 PTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSRDSRSEPKRVEG 133
Query: 313 LENVRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXS-IQNQKIPMVIEALATEHII 371
LENV + + G S A+ D+G + W + I ++P +E LA EH++
Sbjct: 134 LENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVV 193
Query: 372 YISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLP 406
+S G + A+T GK++ WG +D ++G GLP
Sbjct: 194 KVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLP 228
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 169/404 (41%), Gaps = 62/404 (15%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
++ +WG+ GQLG V + R S PK L E+ N V+
Sbjct: 102 EIWAWGRNDEGQLGRIVIDSRDSRSE------PKRVEGL---------ENVN---VQAAF 143
Query: 107 SCGLFHSSLVVDGALWVWXXXXXXXXXXXH---EHPLFVPTLNPHLDDVRSVALGGLHSV 163
+ G+ +++ DG+LWVW + E + N + V V+LG H++
Sbjct: 144 ASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHAL 203
Query: 164 ALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLLD 223
AL G+VF WGY G +G+ E L++ +G++K G H A + L+
Sbjct: 204 ALTVDGKVFGWGYVADGRVGNVGLPLE--ASLLDSITDGSMK-----GHHAAG--DLNLE 254
Query: 224 VGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPC--PIAAVSCGGFFTMALTE 281
E PC V+E C +A ++CG ++ L
Sbjct: 255 AAEKKVVEAMSKENDMPIAWE-----------PCLVEE-TCNEKVADIACGSDHSLILCH 302
Query: 282 DGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNGK--VLS 339
DG L + G+N +LGR + G KP + I IA+G HSLA+ + G+ +LS
Sbjct: 303 DGTLLSAGSNIYGQLGRSKQDLGMKPVDITE----SPISIAAGLGHSLAICNRGERNILS 358
Query: 340 WXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNASDSQ 399
W +N +P +E E +S G S VT+KG+ ++WG + +
Sbjct: 359 WGWNRSRQLGRGKPEN--LPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGR 416
Query: 400 LGVPGLPAIQSSPIEVNFLMED-DGLGPHKVLSVATGASHAMCL 442
LG+ G + + P+ L+ED +G VL G H++ L
Sbjct: 417 LGL-GSSSDEPEPM----LLEDVEGC----VLQAVAGFDHSLIL 451
>AT5G48330.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:19585989-19587729 FORWARD
LENGTH=455
Length = 455
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Query: 256 PCKVKELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGR----GDKIGGWKPRPVP 311
P V LP I+++S G + ++A+T G++W WG N +LGR + +P+ V
Sbjct: 74 PTVVSNLPSDISSISAGHYHSLAVTSSGEIWAWGRNDEGQLGRIVIDSSRDSRSEPKRVE 133
Query: 312 SLENVRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXS-IQNQKIPMVIEALATEHI 370
LENV + + G S A+ D+G + W + I ++P +E LA EH+
Sbjct: 134 GLENVNVQAAFASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHV 193
Query: 371 IYISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLP 406
+ +S G + A+T GK++ WG +D ++G GLP
Sbjct: 194 VKVSLGWGHALALTVDGKVFGWGYVADGRVGNVGLP 229
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 169/404 (41%), Gaps = 61/404 (15%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
++ +WG+ GQLG +VI S + S P R+ E V+
Sbjct: 102 EIWAWGRNDEGQLG--------------RIVIDSSRDSRSE-PKRV--EGLENVNVQAAF 144
Query: 107 SCGLFHSSLVVDGALWVWXXXXXXXXXXXH---EHPLFVPTLNPHLDDVRSVALGGLHSV 163
+ G+ +++ DG+LWVW + E + N + V V+LG H++
Sbjct: 145 ASGVVSAAIGDDGSLWVWGRSKRGQLGLGNGIIEARVPSRVENLAAEHVVKVSLGWGHAL 204
Query: 164 ALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLLD 223
AL G+VF WGY G +G+ E L++ +G++K G H A + L+
Sbjct: 205 ALTVDGKVFGWGYVADGRVGNVGLPLE--ASLLDSITDGSMK-----GHHAAG--DLNLE 255
Query: 224 VGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPC--PIAAVSCGGFFTMALTE 281
E PC V+E C +A ++CG ++ L
Sbjct: 256 AAEKKVVEAMSKENDMPIAWE-----------PCLVEE-TCNEKVADIACGSDHSLILCH 303
Query: 282 DGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNGK--VLS 339
DG L + G+N +LGR + G KP + I IA+G HSLA+ + G+ +LS
Sbjct: 304 DGTLLSAGSNIYGQLGRSKQDLGMKPVDITE----SPISIAAGLGHSLAICNRGERNILS 359
Query: 340 WXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNASDSQ 399
W +N +P +E E +S G S VT+KG+ ++WG + +
Sbjct: 360 WGWNRSRQLGRGKPEN--LPREVEGFDGESPASVSAGRVHSLCVTEKGEAWVWGCGKNGR 417
Query: 400 LGVPGLPAIQSSPIEVNFLMED-DGLGPHKVLSVATGASHAMCL 442
LG+ G + + P+ L+ED +G VL G H++ L
Sbjct: 418 LGL-GSSSDEPEPM----LLEDVEGC----VLQAVAGFDHSLIL 452
>AT1G69710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr1:26222325-26226530 FORWARD LENGTH=1041
Length = 1041
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 118/287 (41%), Gaps = 9/287 (3%)
Query: 106 ISCGLFHS-SLVVDGALWVWXXXXXXXXXXXH--EHPLFVP---TLNPHLDDVRSVALGG 159
++CG FH+ ++ G L+ W H E ++P T + V VA G
Sbjct: 357 LACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGP 416
Query: 160 LHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTE 219
H+ + S G++FT+G G FGALGH +PR VE + +A HTAA+ E
Sbjct: 417 WHTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTAAVVE 476
Query: 220 FLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGG---LSIPCKVKELPCPIAAVSCGGFFT 276
+ E H L C + I V+CG T
Sbjct: 477 VTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACGHSLT 536
Query: 277 MALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNGK 336
++ T G ++ G+ + +LG G + R + + +IA G YH LT +
Sbjct: 537 VSRTSRGHVYTMGSTAYGQLGNPTAKGNFPERVEGDIVEASVEEIACGSYHVAVLTSKSE 596
Query: 337 VLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAV 383
+ +W +++N++ P V+ L + + I+CG +F+A +
Sbjct: 597 IYTWGKGLNGQLGHGNVENKREPAVVGFLREKQVKAITCGSNFTAVI 643
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 141/371 (38%), Gaps = 43/371 (11%)
Query: 105 GISCGLFHSSLVV-DGALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDDV--RSVALGGLH 161
I+CG H+ LV G ++ W E P + + +S+A G H
Sbjct: 304 NIACGKCHAVLVTKQGEIFSWGEGKGGKLGHGLETDAQKPKFISSVRGLGFKSLACGDFH 363
Query: 162 SVALVSPGEVFTWGYG--GFGALGHAVYHRELLPRLVEGCWEG-TIKHIATSGTHTAALT 218
+ A+ G++++WG G LGH +P+ V G +G + +A HTA +
Sbjct: 364 TCAITQSGDLYSWGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVA 423
Query: 219 EFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKEL-PCPIAAVSCGGFFTM 277
G+LF S+P +V+ L + V+CG + T
Sbjct: 424 ----SSGQLF-------TFGDGTFGALGHGDRRSTSVPREVESLIGLIVTKVACGVWHTA 472
Query: 278 ALTE-------------DGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASG 324
A+ E GQ++ WG +LG GD P V SL N I Q+A G
Sbjct: 473 AVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVISLTNENICQVACG 532
Query: 325 GYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATE-HIIYISCGGSFSAAV 383
+++ T G V + + + P +E E + I+CG A +
Sbjct: 533 HSLTVSRTSRGHVYTMGSTAYGQLGNPTAKGN-FPERVEGDIVEASVEEIACGSYHVAVL 591
Query: 384 TDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDD------GLGPHKVLSV---AT 434
T K ++Y WG + QLG G + P V FL E G V+ V
Sbjct: 592 TSKSEIYTWGKGLNGQLG-HGNVENKREPAVVGFLREKQVKAITCGSNFTAVICVHKWVP 650
Query: 435 GASHAMCLALR 445
G+ H++C R
Sbjct: 651 GSEHSLCAGCR 661
>AT3G23270.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family with FYVE zinc finger domain |
chr3:8316436-8320337 FORWARD LENGTH=1045
Length = 1045
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 145/365 (39%), Gaps = 42/365 (11%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
++ +WG+ G+LG G++ P V L + F +
Sbjct: 271 EVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDF----------------------V 308
Query: 107 SCGLFHSSLV-VDGALWVWXXXXXXXXXXXHEHPL--FVPT-LNPHLD--DVRSVALGGL 160
+CG +H+ +V G L+ W H + ++P ++ L+ V SVA G
Sbjct: 309 ACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTW 368
Query: 161 HSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEF 220
HS + G++FT+G G FG LGH P+ V+ +A S HTAA+ E
Sbjct: 369 HSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEV 428
Query: 221 LLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVSCGGFFTMALT 280
+ L C + ++CG FT+ALT
Sbjct: 429 MGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALT 488
Query: 281 EDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRII-----QIASGGYHSLALTDNG 335
G ++ G ++ +LG G +P L R++ +IA G +H LT
Sbjct: 489 TSGHVFTMGGTAHGQLGNSISDG-----KLPCLVQDRLVGEFVEEIACGAHHVAVLTSRS 543
Query: 336 KVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNA 395
+V +W ++++ P ++EAL H+ +SCG +F++++ ++ W +
Sbjct: 544 EVFTWGKGANGRLGHGDTEDKRTPTLVEALRDRHVKSLSCGSNFTSSIC----IHKWVSG 599
Query: 396 SDSQL 400
+D +
Sbjct: 600 ADQSI 604
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 129/312 (41%), Gaps = 38/312 (12%)
Query: 151 DVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATS 210
DV + G H + GEVFTWG G LGH + P+LVE I +A
Sbjct: 252 DVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACG 311
Query: 211 GTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLS--IPCKVKELPCPIA- 267
HT ++ G+LF H +S IP K + P+
Sbjct: 312 EYHTCVVS----TSGDLF-------SWGDGIHNVGLLGHGSDISHWIP---KRVSGPLEG 357
Query: 268 ----AVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIAS 323
+V+CG + + T +G+L+ +G + LG G++ P+ V SL ++ +++A
Sbjct: 358 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVAC 417
Query: 324 GGYHSLALTD----------NGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYI 373
+H+ A+ + + K+ +W + + +P + +L + I
Sbjct: 418 SIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKI 477
Query: 374 SCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVA 433
+CG +F+ A+T G ++ G + QLG S ++ L++D +G V +A
Sbjct: 478 ACGHTFTVALTTSGHVFTMGGTAHGQLGN------SISDGKLPCLVQDRLVGEF-VEEIA 530
Query: 434 TGASHAMCLALR 445
GA H L R
Sbjct: 531 CGAHHVAVLTSR 542
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 130/314 (41%), Gaps = 30/314 (9%)
Query: 106 ISCGLFHSSLVV-DGALWVWXXXXXXXXXXXHEHPLFVPTLNPHL--DDVRSVALGGLHS 162
I CG+ H +LV G ++ W + + P L L ++ VA G H+
Sbjct: 256 IVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLALTNIDFVACGEYHT 315
Query: 163 VALVSPGEVFTWGYG--GFGALGHAVYHRELLPRLVEGCWEG-TIKHIATSGTHTAALTE 219
+ + G++F+WG G G LGH +P+ V G EG + +A H+A T
Sbjct: 316 CVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACGTWHSALATA 375
Query: 220 FLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELP-CPIAAVSCGGFFTMA 278
G+LF + +S P +V+ L V+C + T A
Sbjct: 376 N----GKLF-------TFGDGAFGVLGHGNRESVSYPKEVQSLNGLKTVKVACSIWHTAA 424
Query: 279 LTE----------DGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHS 328
+ E +L+ WG LG G+K P V SL + +IA G +
Sbjct: 425 IVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFT 484
Query: 329 LALTDNGKVLSWXXXXXXXXXXXSIQNQKIP-MVIEALATEHIIYISCGGSFSAAVTDKG 387
+ALT +G V + SI + K+P +V + L E + I+CG A +T +
Sbjct: 485 VALTTSGHVFTMGGTAHGQLGN-SISDGKLPCLVQDRLVGEFVEEIACGAHHVAVLTSRS 543
Query: 388 KLYMWGNASDSQLG 401
+++ WG ++ +LG
Sbjct: 544 EVFTWGKGANGRLG 557
>AT4G14368.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr4:8274279-8278810 REVERSE
LENGTH=1106
Length = 1106
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 143/365 (39%), Gaps = 42/365 (11%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
++ +W + A G+LG G++ P V L + F +
Sbjct: 290 EVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDF----------------------V 327
Query: 107 SCGLFHSSLV-VDGALWVWXXXXXXXXXXXHEHPL--FVPT-LNPHLD--DVRSVALGGL 160
+CG +H+ V G L+ W H L ++P ++ ++ V SVA G
Sbjct: 328 ACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTW 387
Query: 161 HSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEF 220
HS + G++FT+G G FG LGH P+ V+ +A HT A+ E
Sbjct: 388 HSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVWHTVAIVEV 447
Query: 221 LLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVSCGGFFTMALT 280
+ G L C + ++CG FT+ALT
Sbjct: 448 MNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALT 507
Query: 281 EDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRII-----QIASGGYHSLALTDNG 335
G ++ G S+ +LG + G +P L R++ +I+ G +H LT
Sbjct: 508 TSGHVFTMGGTSHGQLGSSNSDG-----KLPCLVQDRLVGEFVEEISCGDHHVAVLTSRS 562
Query: 336 KVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNA 395
+V +W ++K P ++EAL H+ ISCG +F++++ ++ W +
Sbjct: 563 EVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFTSSIC----IHKWVSG 618
Query: 396 SDSQL 400
+D +
Sbjct: 619 ADQSV 623
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 125/300 (41%), Gaps = 36/300 (12%)
Query: 151 DVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATS 210
DV +A G H + GEVFTW G LGH + P+LVE I +A
Sbjct: 271 DVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACG 330
Query: 211 GTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLS--IPCKVKELPCPIA- 267
HT A++ G+LF H LS IP K + P+
Sbjct: 331 EYHTCAVST----SGDLF-------TWGDGIHNVGLLGHGSDLSHWIP---KRVSGPVEG 376
Query: 268 ----AVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIAS 323
+V+CG + + T +G+L+ +G + LG GD+ P+ V L ++ +++A
Sbjct: 377 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVAC 436
Query: 324 GGYHSLAL----------TDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYI 373
G +H++A+ T + K+ +W + + +P + +L + I
Sbjct: 437 GVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQI 496
Query: 374 SCGGSFSAAVTDKGKLYMWGNASDSQLGVPG----LPAIQSSPIEVNFLMEDDGLGPHKV 429
+CG +F+ A+T G ++ G S QLG LP + + V +E+ G H V
Sbjct: 497 ACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRL-VGEFVEEISCGDHHV 555
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 139/337 (41%), Gaps = 39/337 (11%)
Query: 106 ISCGLFHSSLVV-DGALWVWXXXXXXXXXXXHEHPLFVPTLNPHL------DDVRSVALG 158
I+CG+ H +LV G ++ W H + V P L ++ VA G
Sbjct: 275 IACGVRHIALVTRQGEVFTWEEEAGGRLG----HGIQVDVCRPKLVEFLALTNIDFVACG 330
Query: 159 GLHSVALVSPGEVFTWGYG--GFGALGHAVYHRELLPRLVEGCWEG-TIKHIATSGTHTA 215
H+ A+ + G++FTWG G G LGH +P+ V G EG + +A H+A
Sbjct: 331 EYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWHSA 390
Query: 216 ALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELP-CPIAAVSCGGF 274
T G+LF +S P +VK L V+CG +
Sbjct: 391 LATAN----GKLF-------TFGDGAFGVLGHGDRESVSYPKEVKMLSGLKTLKVACGVW 439
Query: 275 FTMALTE----------DGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASG 324
T+A+ E +L+ WG LG G+K P V SL + QIA G
Sbjct: 440 HTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACG 499
Query: 325 GYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIP-MVIEALATEHIIYISCGGSFSAAV 383
++ALT +G V + S + K+P +V + L E + ISCG A +
Sbjct: 500 HTFTVALTTSGHVFTMGGTSHGQLGS-SNSDGKLPCLVQDRLVGEFVEEISCGDHHVAVL 558
Query: 384 TDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLME 420
T + +++ WG S+ +LG G + +P V L E
Sbjct: 559 TSRSEVFTWGKGSNGRLG-HGDKDDRKTPTLVEALRE 594
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 266 IAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGG 325
+ ++CG +T G+++ W + LG G ++ +P+ V L I +A G
Sbjct: 272 VHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLALTNIDFVACGE 331
Query: 326 YHSLALTDNGKVLSWXXXXXXXXXXXSIQN------QKIPMVIEALATEHIIYISCGGSF 379
YH+ A++ +G + +W + +++ +E L ++ ++CG
Sbjct: 332 YHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGL---QVLSVACGTWH 388
Query: 380 SAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVATGASHA 439
SA T GKL+ +G+ + LG ++ S P EV L GL K L VA G H
Sbjct: 389 SALATANGKLFTFGDGAFGVLGHGDRESV-SYPKEVKML---SGL---KTLKVACGVWHT 441
Query: 440 MCL 442
+ +
Sbjct: 442 VAI 444
>AT3G47660.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:17571192-17574805 FORWARD
LENGTH=954
Length = 954
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 137/312 (43%), Gaps = 30/312 (9%)
Query: 141 FVPT-LNPHLD-DVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEG 198
F+P L H+ D +S++ G ++V + G++++WG G LGH V P+L++
Sbjct: 288 FLPKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDE 347
Query: 199 CWEGTIKHIATSGT-HTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPC 257
+ G+ +A G HT A+T G+L+ H + I
Sbjct: 348 -FNGSTVELADCGEFHTCAVTA----SGDLY-AWGDGDHNAGLLGLGSGASHWKPVRILG 401
Query: 258 KVKELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVR 317
+++ + + A+SCG + T +T +G+L+ +G + LG GD+I PR V +L R
Sbjct: 402 QMEGIY--VKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCR 459
Query: 318 IIQIASGGYHSLAL-------TDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHI 370
I+ A G +HS A+ T +GK+ +W I+ + IP + L T
Sbjct: 460 TIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSF 519
Query: 371 IYISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVL 430
++CG S + A++ G++Y G A S V I+ GLG V
Sbjct: 520 QQVACGQSITVALSMSGQVYAMGTADPSHDIVRAPSCIEG------------GLGKSFVQ 567
Query: 431 SVATGASHAMCL 442
VA G H L
Sbjct: 568 EVACGFHHIAVL 579
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 141/354 (39%), Gaps = 58/354 (16%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
Q+ SWG+ + G+LG GV +P + N VEL
Sbjct: 319 QMYSWGEESGGRLGHGVCSYVPHPKLIDEF---------------------NGSTVELA- 356
Query: 107 SCGLFHSSLVV-DGALWVWXXXXXXX------XXXXHEHPLFVPTLNPHLDDVRSVALGG 159
CG FH+ V G L+ W H P+ + + V++++ G
Sbjct: 357 DCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEGIY-VKAISCGP 415
Query: 160 LHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVE---GCWEGTIKHIATSGT-HTA 215
H+ + S G++FT+G G FGALGH +PR VE GC TIK A G H+A
Sbjct: 416 WHTAFVTSEGKLFTFGDGTFGALGHGDRISTNIPREVEALNGCR--TIK--AACGVWHSA 471
Query: 216 ALTEFLLDV---GELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELP-CPIAAVSC 271
A+ + G+LF IP V EL V+C
Sbjct: 472 AVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRL-------IPSCVTELDTTSFQQVAC 524
Query: 272 GGFFTMALTEDGQLWNWG-ANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLA 330
G T+AL+ GQ++ G A+ ++++ R P + +Q + G+H +A
Sbjct: 525 GQSITVALSMSGQVYAMGTADPSHDIVRA-------PSCIEGGLGKSFVQEVACGFHHIA 577
Query: 331 -LTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAV 383
L +V +W + + +P +++AL + + + CG +++A +
Sbjct: 578 VLNSKAEVYTWGKGSNGQLGHGDTEYRCMPTLVKALKGKQVRKVVCGSNYTATI 631
>AT3G02300.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:461551-463929 FORWARD
LENGTH=471
Length = 471
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 109/251 (43%), Gaps = 21/251 (8%)
Query: 154 SVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTH 213
++ G H+ A+ S G +F WG +G LG P+ V+ +K ++
Sbjct: 65 DISCGREHTAAVASDGSLFAWGANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGAFC 124
Query: 214 TAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVSCGG 273
TAA+ E + G L +G +++ VSCG
Sbjct: 125 TAAIAEPRENDGTL--STSRLWVWGQNQGSNLPRLFSGAFPATTAIRQ-------VSCGT 175
Query: 274 FFTMALTEDGQLWNWGANSNYELGRGDKIGGWK-PRPVPSL--------ENVRIIQIASG 324
+AL+E+G L WG N +LGRG G + PR + + E V+I+Q++ G
Sbjct: 176 AHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKIMQLSCG 235
Query: 325 GYHSLALTDNGKVLSWXXXXXXXXXXXSIQN---QKIPMVIEALATEHIIYISCGGSFSA 381
YH+ AL+D G+V +W S+Q+ + IP + L + ++CGG +
Sbjct: 236 EYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTC 295
Query: 382 AVTDKGKLYMW 392
A++ +G LY W
Sbjct: 296 ALSLEGALYAW 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 147 PHLDDVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYH---RELLPRLVEGCWEGT 203
P L + ++ G H+ AL GEV+TWG G G LGH +EL+PR V G +
Sbjct: 224 PELVKIMQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVS 283
Query: 204 IKHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCK---VK 260
+K +A G HT AL+ L+ + + G + + V
Sbjct: 284 MKEVACGGVHTCALS---LEGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVL 340
Query: 261 ELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVP-SLENVRII 319
+P + V+CG T+ +G++ WG NS + W P PV + VR
Sbjct: 341 VIPTDVRLVACGHSHTLVYMREGRICGWGYNSYGQAANEKSSYAWYPSPVDWCVGQVR-- 398
Query: 320 QIASGGYHSLALTD 333
++A+GG HS LTD
Sbjct: 399 KLAAGGGHSAVLTD 412
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 135/379 (35%), Gaps = 112/379 (29%)
Query: 48 LLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGIS 107
L +WG GQLG G E R +P V L E V+ +S
Sbjct: 82 LFAWGANEYGQLGDGTEVGRKHPKKVKQL---------------------QSEFVKF-VS 119
Query: 108 CGLFHSSLVV-----DGAL-----WVWXXXXXXXXXXXHEHPLFVPTLNPHLDDVRSVAL 157
CG F ++ + DG L WVW P P +R V+
Sbjct: 120 CGAFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNL------PRLFSGAFPATTAIRQVSC 173
Query: 158 GGLHSVALVSPGEVFTWGYGGFGALGHAVYHREL-LPRLVEGCWEGTIKHIATSGTHTAA 216
G H VAL G + WGY G LG V L PR++ A
Sbjct: 174 GTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVIN------------------A 215
Query: 217 LTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVSCGGFFT 276
+FL + EL I +SCG + T
Sbjct: 216 YAKFLDEAPELV------------------------------------KIMQLSCGEYHT 239
Query: 277 MALTEDGQLWNWGANSNYELGRGDKIGGWK---PRPVPSLENVRIIQIASGGYHSLALTD 333
AL++ G+++ WG S +LG G K PR V L+ V + ++A GG H+ AL+
Sbjct: 240 AALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVVGLDGVSMKEVACGGVHTCALSL 299
Query: 334 NGKVLSWXXXXXXXXXXX-------SIQN------QKIPMVIEALATEHIIYISCGGSFS 380
G + +W S+ N + +P+++ + T+ + ++CG S +
Sbjct: 300 EGALYAWGGGQAGQLGLGPQSGFFFSVSNGSEMLLRNVPVLV--IPTD-VRLVACGHSHT 356
Query: 381 AAVTDKGKLYMWGNASDSQ 399
+G++ WG S Q
Sbjct: 357 LVYMREGRICGWGYNSYGQ 375
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 120/315 (38%), Gaps = 58/315 (18%)
Query: 162 SVALVSPGEVFTWGYGGFGALGHAVYHREL-----LPRLVEGCWEGTIKH---IATSGTH 213
SV++ + ++ WGY G G + L LP + GC G I+ H
Sbjct: 13 SVSIPTKSAIYVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWLDISCGREH 72
Query: 214 TAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCP-IAAVSCG 272
TAA+ G LF G P KVK+L + VSCG
Sbjct: 73 TAAVA----SDGSLFAWGANEYGQLGDGTEV-------GRKHPKKVKQLQSEFVKFVSCG 121
Query: 273 GFFTMALTE----DG-----QLWNWGANSNYELGRGDKIGGWKPR----PVPSLENVRII 319
F T A+ E DG +LW WG N L PR P+ +R
Sbjct: 122 AFCTAAIAEPRENDGTLSTSRLWVWGQNQGSNL----------PRLFSGAFPATTAIR-- 169
Query: 320 QIASGGYHSLALTDNGKVLSWXXXXXXXXXX-XSIQNQKIPMVIEALAT--------EHI 370
Q++ G H +AL++ G + +W + + + P VI A A I
Sbjct: 170 QVSCGTAHVVALSEEGLLQAWGYNEQGQLGRGVTCEGLQAPRVINAYAKFLDEAPELVKI 229
Query: 371 IYISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVL 430
+ +SCG +AA++D G++Y WG S QLG L + I + GL +
Sbjct: 230 MQLSCGEYHTAALSDAGEVYTWGLGSMGQLGHVSLQSGDKELIPRRVV----GLDGVSMK 285
Query: 431 SVATGASHAMCLALR 445
VA G H L+L
Sbjct: 286 EVACGGVHTCALSLE 300
>AT3G15430.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 129/312 (41%), Gaps = 24/312 (7%)
Query: 141 FVPTLNPHLDDVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELL-PRLVEGC 199
F P P V V+ HS ++ G+V T G GH R + P+LVE
Sbjct: 154 FTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEAL 213
Query: 200 WEGTIKHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPC-K 258
K +A +G H T FL G + H L P K
Sbjct: 214 KGTPCKQVA-AGLH---FTVFLSREGHAY---------TCGSNTHGQLGHGDTLDRPVPK 260
Query: 259 VKELPC---PIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLEN 315
V E P+ ++ G + +A+T+DG ++++G+ SN+ LG G++ +PR + + +
Sbjct: 261 VVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKR 320
Query: 316 --VRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYI 373
+ I+++++G H++AL NG+V +W ++ P V+ L + +
Sbjct: 321 KGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQV 380
Query: 374 SCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVA 433
+ + + G LY +G LG P + + L + L PH+V V+
Sbjct: 381 CARKRKTFVLVEGGLLYGFGWMGFGSLGFPD-RGVSDKVLRPRVL---ECLKPHRVSQVS 436
Query: 434 TGASHAMCLALR 445
TG H + + R
Sbjct: 437 TGLYHTIVVTQR 448
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 104/274 (37%), Gaps = 22/274 (8%)
Query: 138 HPLFVPTLNPHLDDV--RSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRL 195
P+F P L L + VA G +V L G +T G G LGH +P++
Sbjct: 202 RPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKV 261
Query: 196 VEGCWE-GTIKHIATSGTHTAALTE----FLLDVGELFFXXXXXXXXXXXXXXXXXXXHA 250
VE G + IA ++ A+T+ + G F
Sbjct: 262 VEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRK 321
Query: 251 GGLSIPCKVKELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPV 310
G I VS G +AL +G+++ WG LG GD+ P+ +
Sbjct: 322 G------------IHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVL 369
Query: 311 PSLENVRIIQIASGGYHSLALTDNGKV--LSWXXXXXXXXXXXSIQNQKI-PMVIEALAT 367
+L N +Q+ + + L + G + W + ++ + P V+E L
Sbjct: 370 VNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKP 429
Query: 368 EHIIYISCGGSFSAAVTDKGKLYMWGNASDSQLG 401
+ +S G + VT +G+++ +G+ +QLG
Sbjct: 430 HRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLG 463
>AT3G15430.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:5209408-5211562 FORWARD
LENGTH=488
Length = 488
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 129/312 (41%), Gaps = 24/312 (7%)
Query: 141 FVPTLNPHLDDVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELL-PRLVEGC 199
F P P V V+ HS ++ G+V T G GH R + P+LVE
Sbjct: 154 FTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGDNSSHCCGHLDTSRPIFRPKLVEAL 213
Query: 200 WEGTIKHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPC-K 258
K +A +G H T FL G + H L P K
Sbjct: 214 KGTPCKQVA-AGLH---FTVFLSREGHAY---------TCGSNTHGQLGHGDTLDRPVPK 260
Query: 259 VKELPC---PIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLEN 315
V E P+ ++ G + +A+T+DG ++++G+ SN+ LG G++ +PR + + +
Sbjct: 261 VVEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKR 320
Query: 316 --VRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYI 373
+ I+++++G H++AL NG+V +W ++ P V+ L + +
Sbjct: 321 KGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVLVNLNNCLAVQV 380
Query: 374 SCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVA 433
+ + + G LY +G LG P + + L + L PH+V V+
Sbjct: 381 CARKRKTFVLVEGGLLYGFGWMGFGSLGFPD-RGVSDKVLRPRVL---ECLKPHRVSQVS 436
Query: 434 TGASHAMCLALR 445
TG H + + R
Sbjct: 437 TGLYHTIVVTQR 448
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 104/274 (37%), Gaps = 22/274 (8%)
Query: 138 HPLFVPTLNPHLDDV--RSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRL 195
P+F P L L + VA G +V L G +T G G LGH +P++
Sbjct: 202 RPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQLGHGDTLDRPVPKV 261
Query: 196 VEGCWE-GTIKHIATSGTHTAALTE----FLLDVGELFFXXXXXXXXXXXXXXXXXXXHA 250
VE G + IA ++ A+T+ + G F
Sbjct: 262 VEFLKTIGPVVQIAAGPSYVLAVTQDGSVYSFGSGSNFCLGHGEQQDELQPRVIQAFKRK 321
Query: 251 GGLSIPCKVKELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPV 310
G I VS G +AL +G+++ WG LG GD+ P+ +
Sbjct: 322 G------------IHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDENDKITPQVL 369
Query: 311 PSLENVRIIQIASGGYHSLALTDNGKV--LSWXXXXXXXXXXXSIQNQKI-PMVIEALAT 367
+L N +Q+ + + L + G + W + ++ + P V+E L
Sbjct: 370 VNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLGFPDRGVSDKVLRPRVLECLKP 429
Query: 368 EHIIYISCGGSFSAAVTDKGKLYMWGNASDSQLG 401
+ +S G + VT +G+++ +G+ +QLG
Sbjct: 430 HRVSQVSTGLYHTIVVTQRGRIFGFGDNERAQLG 463
>AT3G03790.2 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1081
Length = 1081
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
Query: 152 VRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRE------LLPR-LVEGCWEGTI 204
++ V+ HSVA+ + GEV+TWG+G G LGH + + PR ++ G +
Sbjct: 188 IKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRV 247
Query: 205 KHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPC 264
K +A + HT TE G+++ + P KV L
Sbjct: 248 KAVAAAKHHTVIATEG----GDVYTWGSNREGQLGYTSVDTQ-------ATPRKVTSLKA 296
Query: 265 PIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRG--DKIGGWKPRPVPSLENVRIIQIA 322
I AVS T +++ G+++ WG N +LG G + + PR V L+ IA
Sbjct: 297 KIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIA 356
Query: 323 SGGYHSLALTDNGKVLSW 340
S YH+L L ++G+V +W
Sbjct: 357 SSKYHTLVLRNDGEVYTW 374
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 145/364 (39%), Gaps = 63/364 (17%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
++ SWG GA+ QLG G + V+ + PGR+ +S + ++L +
Sbjct: 154 EVFSWGNGANYQLGTGNQHVQ-------------------KVPGRV--DSLHGCFIKL-V 191
Query: 107 SCGLFHS-SLVVDGALWVWXXXXXXXXXXXHEHPLF------VPTLNPHL-------DDV 152
S FHS ++ G ++ W HP F + P V
Sbjct: 192 SAAKFHSVAISTHGEVYTWGFGRGGRLG----HPEFDIHSGQAAVITPRQVISGLGSRRV 247
Query: 153 RSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGT 212
++VA H+V G+V+TWG G LG+ + PR V + I ++ +
Sbjct: 248 KAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL-KAKIVAVSAANK 306
Query: 213 HTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVSCG 272
HTA ++ D GE+F ++ L K K A++
Sbjct: 307 HTAVVS----DCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVF----TAIASS 358
Query: 273 GFFTMALTEDGQLWNWGAN----SNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHS 328
+ T+ L DG+++ WG + R K G +R+ IA+G HS
Sbjct: 359 KYHTLVLRNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHS 418
Query: 329 LALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGK 388
LAL ++G W +++ Q+ + +L + ++ IS G +++AVT G+
Sbjct: 419 LALAEDGAFFYW------VSSDSNLRCQQ----LHSLHGKTVVSISAGKYWASAVTSTGE 468
Query: 389 LYMW 392
+YMW
Sbjct: 469 VYMW 472
>AT3G03790.3 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-968011 FORWARD LENGTH=1099
Length = 1099
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
Query: 152 VRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRE------LLPR-LVEGCWEGTI 204
++ V+ HSVA+ + GEV+TWG+G G LGH + + PR ++ G +
Sbjct: 188 IKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRV 247
Query: 205 KHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPC 264
K +A + HT TE G+++ + P KV L
Sbjct: 248 KAVAAAKHHTVIATEG----GDVYTWGSNREGQLGYTSVDTQ-------ATPRKVTSLKA 296
Query: 265 PIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRG--DKIGGWKPRPVPSLENVRIIQIA 322
I AVS T +++ G+++ WG N +LG G + + PR V L+ IA
Sbjct: 297 KIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIA 356
Query: 323 SGGYHSLALTDNGKVLSW 340
S YH+L L ++G+V +W
Sbjct: 357 SSKYHTLVLRNDGEVYTW 374
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 145/364 (39%), Gaps = 63/364 (17%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
++ SWG GA+ QLG G + V+ + PGR+ +S + ++L +
Sbjct: 154 EVFSWGNGANYQLGTGNQHVQ-------------------KVPGRV--DSLHGCFIKL-V 191
Query: 107 SCGLFHS-SLVVDGALWVWXXXXXXXXXXXHEHPLF------VPTLNPHL-------DDV 152
S FHS ++ G ++ W HP F + P V
Sbjct: 192 SAAKFHSVAISTHGEVYTWGFGRGGRLG----HPEFDIHSGQAAVITPRQVISGLGSRRV 247
Query: 153 RSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGT 212
++VA H+V G+V+TWG G LG+ + PR V + I ++ +
Sbjct: 248 KAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL-KAKIVAVSAANK 306
Query: 213 HTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVSCG 272
HTA ++ D GE+F ++ L K K A++
Sbjct: 307 HTAVVS----DCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVF----TAIASS 358
Query: 273 GFFTMALTEDGQLWNWGAN----SNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHS 328
+ T+ L DG+++ WG + R K G +R+ IA+G HS
Sbjct: 359 KYHTLVLRNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHS 418
Query: 329 LALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGK 388
LAL ++G W +++ Q+ + +L + ++ IS G +++AVT G+
Sbjct: 419 LALAEDGAFFYW------VSSDSNLRCQQ----LHSLHGKTVVSISAGKYWASAVTSTGE 468
Query: 389 LYMW 392
+YMW
Sbjct: 469 VYMW 472
>AT3G03790.1 | Symbols: | ankyrin repeat family protein / regulator
of chromosome condensation (RCC1) family protein |
chr3:963195-967857 FORWARD LENGTH=1078
Length = 1078
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 89/198 (44%), Gaps = 20/198 (10%)
Query: 152 VRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRE------LLPR-LVEGCWEGTI 204
++ V+ HSVA+ + GEV+TWG+G G LGH + + PR ++ G +
Sbjct: 185 IKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRV 244
Query: 205 KHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPC 264
K +A + HT TE G+++ + P KV L
Sbjct: 245 KAVAAAKHHTVIATEG----GDVYTWGSNREGQLGYTSVDTQ-------ATPRKVTSLKA 293
Query: 265 PIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRG--DKIGGWKPRPVPSLENVRIIQIA 322
I AVS T +++ G+++ WG N +LG G + + PR V L+ IA
Sbjct: 294 KIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVFTAIA 353
Query: 323 SGGYHSLALTDNGKVLSW 340
S YH+L L ++G+V +W
Sbjct: 354 SSKYHTLVLRNDGEVYTW 371
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 145/364 (39%), Gaps = 63/364 (17%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
++ SWG GA+ QLG G + V+ + PGR+ +S + ++L +
Sbjct: 151 EVFSWGNGANYQLGTGNQHVQ-------------------KVPGRV--DSLHGCFIKL-V 188
Query: 107 SCGLFHS-SLVVDGALWVWXXXXXXXXXXXHEHPLF------VPTLNPHL-------DDV 152
S FHS ++ G ++ W HP F + P V
Sbjct: 189 SAAKFHSVAISTHGEVYTWGFGRGGRLG----HPEFDIHSGQAAVITPRQVISGLGSRRV 244
Query: 153 RSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGT 212
++VA H+V G+V+TWG G LG+ + PR V + I ++ +
Sbjct: 245 KAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL-KAKIVAVSAANK 303
Query: 213 HTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVSCG 272
HTA ++ D GE+F ++ L K K A++
Sbjct: 304 HTAVVS----DCGEVFTWGCNKEGQLGYGTSNSASNYSPRLVDYLKGKVF----TAIASS 355
Query: 273 GFFTMALTEDGQLWNWGAN----SNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHS 328
+ T+ L DG+++ WG + R K G +R+ IA+G HS
Sbjct: 356 KYHTLVLRNDGEVYTWGHRLVTPRRVIISRNLKKAGNTLLNFHRRRPLRLTAIAAGMVHS 415
Query: 329 LALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGK 388
LAL ++G W +++ Q+ + +L + ++ IS G +++AVT G+
Sbjct: 416 LALAEDGAFFYW------VSSDSNLRCQQ----LHSLHGKTVVSISAGKYWASAVTSTGE 465
Query: 389 LYMW 392
+YMW
Sbjct: 466 VYMW 469
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 87/199 (43%), Gaps = 15/199 (7%)
Query: 252 GLSIPCKVKELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVP 311
G S + +L P+ VS + + ++++WG +NY+LG G++ P V
Sbjct: 119 GASFTLEDIKLRTPVDLVSGPVAQVIGEQQSSEVFSWGNGANYQLGTGNQHVQKVPGRVD 178
Query: 312 SLENVRIIQIASGGYHSLALTDNGKVLSW-----XXXXXXXXXXXSIQNQKIP--MVIEA 364
SL I +++ +HS+A++ +G+V +W S Q I VI
Sbjct: 179 SLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVITPRQVISG 238
Query: 365 LATEHIIYISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGL 424
L + + ++ + T+ G +Y WG+ + QLG + Q++P +V L
Sbjct: 239 LGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDT-QATPRKVTSLKA---- 293
Query: 425 GPHKVLSVATGASHAMCLA 443
K+++V+ H ++
Sbjct: 294 ---KIVAVSAANKHTAVVS 309
>AT3G55580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:20612766-20615730 FORWARD
LENGTH=488
Length = 488
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 116/269 (43%), Gaps = 42/269 (15%)
Query: 152 VRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATS- 210
+ SVA GG H++AL G+V+ WGYGG G LG R + C E + ATS
Sbjct: 236 IVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYGKATSS 295
Query: 211 GTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVS 270
G + +++ + +G + ++
Sbjct: 296 GVNMSSVVQCGRVLGSY--------------------------------------VKKIA 317
Query: 271 CGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLA 330
CGG + +T+ G L +G + G+G P V SL +RI ++A+G +H+
Sbjct: 318 CGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTC 377
Query: 331 LTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEA--LATEHIIYISCGGSFSAAVTDKGK 388
+ +G V ++ Q + +P ++EA L ++ ISCG +A +TD+G+
Sbjct: 378 ASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGARHTAVITDEGR 437
Query: 389 LYMWGNASDSQLGVPGLPAIQSSPIEVNF 417
++ WG QLG+ G +++P EV
Sbjct: 438 VFCWGWNKYGQLGI-GDVIDRNAPAEVRI 465
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 88/211 (41%), Gaps = 31/211 (14%)
Query: 254 SIPCKVKELP-CPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIG-GWKPRPVP 311
++PC V P I +V+ GG T+AL++ GQ+W WG +LG G ++ P P+P
Sbjct: 223 ALPCLVSLAPGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIP 282
Query: 312 SLE------------------------NVRIIQIASGGYHSLALTDNGKVLSWXXXXXXX 347
+E + +IA GG HS +TD G +L++
Sbjct: 283 CIEPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQ 342
Query: 348 XXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPA 407
S ++ P + +L I ++ G + + G +Y +G QLG G
Sbjct: 343 CGQGSTDDELSPTCVSSLLGIRIEEVAAGLWHTTCASSDGDVYAFGGNQFGQLGT-GCDQ 401
Query: 408 IQSSPIEVNFLMEDDGLGPHKVLSVATGASH 438
++ P L+E L V +++ GA H
Sbjct: 402 AETLP----KLLEAPNLENVNVKTISCGARH 428
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 81/196 (41%), Gaps = 24/196 (12%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELG- 105
Q+ WG G GQLG G VRL SP I SS+ + + G VV+ G
Sbjct: 254 QVWGWGYGGEGQLGLG-SRVRLVSSPHPIPCIEPSSYGKATSSG-----VNMSSVVQCGR 307
Query: 106 --------ISCGLFHSSLVVD-GALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDDVR--S 154
I+CG HS+++ D GAL + PT L +R
Sbjct: 308 VLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCGQGSTDDELSPTCVSSLLGIRIEE 367
Query: 155 VALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEG--CWEGTIKHIATSGT 212
VA G H+ S G+V+ +G FG LG E LP+L+E +K I+
Sbjct: 368 VAAGLWHTTCASSDGDVYAFGGNQFGQLGTGCDQAETLPKLLEAPNLENVNVKTISCGAR 427
Query: 213 HTAALTEFLLDVGELF 228
HTA +T D G +F
Sbjct: 428 HTAVIT----DEGRVF 439
>AT3G53830.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:19940814-19943592 FORWARD
LENGTH=472
Length = 472
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 129/295 (43%), Gaps = 47/295 (15%)
Query: 152 VRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSG 211
+ SVA GG H++AL G+++ WGYGG G LG L R IK +++
Sbjct: 216 ITSVATGGRHTLALSDLGQIWGWGYGGEGQLG-------LGSR---------IKMVSSP- 258
Query: 212 THTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCK--VKELPCPIAAV 269
H E + E F H GG + +E I A+
Sbjct: 259 -HLIPCLESIGSGKERSFIL-----------------HQGGTTTTSAQASREPGQYIKAI 300
Query: 270 SCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSL 329
SCGG + A+T+ G L +G + G G+ +P V +++VR+ +A+G +H++
Sbjct: 301 SCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTI 360
Query: 330 ALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEA--LATEHIIYISCGGSFSAAVTDKG 387
++ +GKV ++ + + +P +++ L +H +SCG SA + + G
Sbjct: 361 CISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCGARHSAVLAEDG 420
Query: 388 KLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVATGASHAMCL 442
+L WG QLG+ G ++ P +V DG ++ VA G H + L
Sbjct: 421 QLLCWGWNKYGQLGL-GDTNDRNIPTQVQL----DGC---RLRKVACGWWHTLLL 467
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 49/338 (14%)
Query: 138 HPLFVPTLNPHLDDVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVE 197
P +PT P V + G H + GE FTWG+ + ++ + +
Sbjct: 97 EPFPLPTEAP----VVQASSGWAHCAVVTETGEAFTWGWK------ECIPSKDPVGKQQS 146
Query: 198 GCWEGTIKHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGL--SI 255
G E IA+ G++ A+ T + ++ G +
Sbjct: 147 GSSE--QGDIASQGSNAASGTTLQNENQKVGEESVKRRRVSTAKDETEGHTSGGDFFATT 204
Query: 256 PCKVK-ELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGG-WKPRPVPSL 313
P V L I +V+ GG T+AL++ GQ+W WG +LG G +I P +P L
Sbjct: 205 PSLVSVGLGVRITSVATGGRHTLALSDLGQIWGWGYGGEGQLGLGSRIKMVSSPHLIPCL 264
Query: 314 ENV----------------------------RIIQIASGGYHSLALTDNGKVLSWXXXXX 345
E++ I I+ GG HS A+TD G ++++
Sbjct: 265 ESIGSGKERSFILHQGGTTTTSAQASREPGQYIKAISCGGRHSAAITDAGGLITFGWGLY 324
Query: 346 XXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGL 405
+ +Q PM + + + + ++ G + ++ GK+Y +G QLG G
Sbjct: 325 GQCGHGNTNDQLRPMAVSEVKSVRMESVAAGLWHTICISSDGKVYAFGGNQFGQLGT-GT 383
Query: 406 PAIQSSPIEVNFLMEDDGLGPHKVLSVATGASHAMCLA 443
+ P L++ L +V+ GA H+ LA
Sbjct: 384 DHAEILP----RLLDGQNLEGKHAKAVSCGARHSAVLA 417
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 84/189 (44%), Gaps = 20/189 (10%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIP---------KSSFALSRTPGRLHHEST 97
Q+ WG G GQLG G +++ SP +IP + SF L +
Sbjct: 234 QIWGWGYGGEGQLGLG-SRIKMVSSP---HLIPCLESIGSGKERSFILHQGGTTTTSAQA 289
Query: 98 NKEVVEL--GISCGLFHSSLVVD-GALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDDVR- 153
++E + ISCG HS+ + D G L + + + P + VR
Sbjct: 290 SREPGQYIKAISCGGRHSAAITDAGGLITFGWGLYGQCGHGNTNDQLRPMAVSEVKSVRM 349
Query: 154 -SVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEG-CWEGT-IKHIATS 210
SVA G H++ + S G+V+ +G FG LG H E+LPRL++G EG K ++
Sbjct: 350 ESVAAGLWHTICISSDGKVYAFGGNQFGQLGTGTDHAEILPRLLDGQNLEGKHAKAVSCG 409
Query: 211 GTHTAALTE 219
H+A L E
Sbjct: 410 ARHSAVLAE 418
>AT1G27060.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:9395023-9396673 FORWARD
LENGTH=386
Length = 386
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 124/297 (41%), Gaps = 26/297 (8%)
Query: 149 LDDVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIA 208
L + +A GG H +AL S G+VFTWG G G LGH LP+LV + I A
Sbjct: 47 LPSISMLACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAA 106
Query: 209 TSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCP-IA 267
+H+ F+ D G +F LS P KV +
Sbjct: 107 AGWSHSG----FVSDSGCIFTCGNGSFGQLGHGDTLS-------LSTPAKVSHFNNDSVK 155
Query: 268 AVSCGGFFTMALTEDGQLWNWGANSNYELG-RGDKIGGWK-PRPVPSLENVRIIQIASGG 325
V+CG ++ L Q+ +G+ +LG D+I P V L++V +++I++ G
Sbjct: 156 MVACGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANG 215
Query: 326 YHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTD 385
HS A++ +G+ SW + Q+ P+ +A G + + +T
Sbjct: 216 DHSAAISADGQFFSWGRGFCGGPDVHAPQSLPSPLSFREVAV--------GWNHALLLTV 267
Query: 386 KGKLYMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVATGASHAMCL 442
G+++ G+ + Q P +Q E F D G KV+ +A GA H+ +
Sbjct: 268 DGEVFKLGSTLNKQ---PEKQQLQIDSSEALFEKVPDFDGV-KVMQIAAGAEHSAAV 320
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 57/357 (15%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
++ +WG+G+SGQLG G + N+ +PK S + V
Sbjct: 68 KVFTWGRGSSGQLGHG---------DILNITLPKLV-------------SFFDDSVITQA 105
Query: 107 SCGLFHSSLVVD-GALWVWXXXXXXXXXXXHEHPLFVPTLNPHL--DDVRSVALGGLHSV 163
+ G HS V D G ++ L P H D V+ VA G HS+
Sbjct: 106 AAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSL 165
Query: 164 ALVSPGEVFTWGYGGFGALGHAVYHREL--LPRLVEGCWEGTIKHIATSGTHTAALTEFL 221
L + +V +G G G LG + + LP +V G + + I+ +G H+AA++
Sbjct: 166 VLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISA-- 223
Query: 222 LDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIA--AVSCGGFFTMAL 279
G+ F GG + + LP P++ V+ G + L
Sbjct: 224 --DGQFF---------------SWGRGFCGGPDVHAP-QSLPSPLSFREVAVGWNHALLL 265
Query: 280 TEDGQLWNWGANSNYELGRGD-KIGGWKP--RPVPSLENVRIIQIASGGYHSLALTDNGK 336
T DG+++ G+ N + + +I + VP + V+++QIA+G HS A+T+NG+
Sbjct: 266 TVDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGE 325
Query: 337 VLSWXXXXXXXXXXXSIQNQKIPMVIE----ALATEHIIYISCGGSFSAAVTDKGKL 389
V +W + +Q P ++ L T+ I + CG F+ AV K +L
Sbjct: 326 VKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKE-IKVYCGSGFTYAVKRKQEL 381
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 138/376 (36%), Gaps = 53/376 (14%)
Query: 47 QLLSWGKGASGQLGGGVEEVRLYPSPVANLVIPKSSFALSRTPGRLHHESTNKEVVELGI 106
Q+ SWG G GQLG + L P ++ +P S +
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISM----------------------L 53
Query: 107 SCGLFHS-SLVVDGALWVWXXXXXXXXXXXHEHPLFVPTLNPHLDD--VRSVALGGLHSV 163
+CG H +L G ++ W + +P L DD + A G HS
Sbjct: 54 ACGGAHVIALTSGGKVFTWGRGSSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSG 113
Query: 164 ALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEFLLD 223
+ G +FT G G FG LGH P V ++K +A H+ L
Sbjct: 114 FVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDSVKMVACGMRHSLVL------ 167
Query: 224 VGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELP-CPIAAVSCGGFFTMALTED 282
+++PC V L + +S G + A++ D
Sbjct: 168 ---FAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDVEVVRISANGDHSAAISAD 224
Query: 283 GQLWNWGANSNYELGRGDKIGG---WKPRPVPSLENVRIIQIASGGYHSLALTDNGKVLS 339
GQ ++WG RG GG P+ +PS + R ++A G H+L LT +G+V
Sbjct: 225 GQFFSWG--------RG-FCGGPDVHAPQSLPSPLSFR--EVAVGWNHALLLTVDGEVFK 273
Query: 340 WXXXXXXXXXXXSIQNQKIPMVIEALAT---EHIIYISCGGSFSAAVTDKGKLYMWGNAS 396
+Q + E + ++ I+ G SAAVT+ G++ WG
Sbjct: 274 LGSTLNKQPEKQQLQIDSSEALFEKVPDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGE 333
Query: 397 DSQLGVPGLPAIQSSP 412
QLG+ G Q+SP
Sbjct: 334 HGQLGL-GNTNDQTSP 348
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 7/159 (4%)
Query: 284 QLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNGKVLSWXXX 343
Q+W+WGA ++ +LG P+ + I +A GG H +ALT GKV +W
Sbjct: 16 QVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPSISMLACGGAHVIALTSGGKVFTWGRG 75
Query: 344 XXXXXXXXSIQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNASDSQLGVP 403
I N +P ++ I + G S S V+D G ++ GN S QLG
Sbjct: 76 SSGQLGHGDILNITLPKLVSFFDDSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLG-H 134
Query: 404 GLPAIQSSPIEVNFLMEDDGLGPHKVLSVATGASHAMCL 442
G S+P +V+ D V VA G H++ L
Sbjct: 135 GDTLSLSTPAKVSHFNND------SVKMVACGMRHSLVL 167
>AT5G08710.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:2834858-2837866 REVERSE
LENGTH=434
Length = 434
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 104/250 (41%), Gaps = 35/250 (14%)
Query: 174 WGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEF-------LLDVGE 226
WG G +G LG + P + + +I +A G HT LTE L D G+
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLTETRRVFATGLNDCGQ 113
Query: 227 LFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAVSCGGFFTMALTEDGQLW 286
L HA P +V L I +S G + + A+T DG+L+
Sbjct: 114 L--------------GVSDVKSHA---MDPLEVSGLDKDILHISAGYYHSAAITVDGELY 156
Query: 287 NWGANSNYELGRGDKIGG--WKPRPVPSLENVRIIQIASGGYHSLALTDNGKVLSWXXXX 344
WG NS+ +LG G K P V +L + I +A G HS+A+TD G+VLSW
Sbjct: 157 MWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGG 216
Query: 345 XXXXXXXS---------IQNQKIPMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWGNA 395
++ P +I+ L + ++ G SA + G +M+G
Sbjct: 217 SGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEK 276
Query: 396 SDSQLGVPGL 405
S +++G G+
Sbjct: 277 SINKMGFGGV 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 120/289 (41%), Gaps = 28/289 (9%)
Query: 139 PLFVPTLNPHLDDVRSVALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEG 198
P L+ H + +VA GG H++ L VF G G LG + + L
Sbjct: 73 PAVCSALSDH--SITAVACGGAHTLFLTETRRVFATGLNDCGQLGVSDVKSHAMDPLEVS 130
Query: 199 CWEGTIKHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCK 258
+ I HI+ H+AA+T +D GEL+ + +P K
Sbjct: 131 GLDKDILHISAGYYHSAAIT---VD-GELYMWGKNSSGQLGLGKKAARV-----VRVPTK 181
Query: 259 VKEL-PCPIAAVSCGGFFTMALTEDGQLWNWGA-----------NSNYELGRGDKIGGWK 306
V+ L I +V+ G ++A+T+ G++ +WG +S + + R + +
Sbjct: 182 VEALHGITIQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSE--FT 239
Query: 307 PRPVPSLENVRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALA 366
PR + LE +++ +A+G HS +NG + ++N P +I +
Sbjct: 240 PRLIKELEGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNATTPSIISEVP 299
Query: 367 TEHIIYISCGGSFSAAVTDKGKLYMWGNASDSQLGVPGLPAIQSSPIEV 415
+ ++CGG + VT G+LY WG+ + LG + SP+ V
Sbjct: 300 --YAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDS-TYVSHSPVRV 345
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 109/256 (42%), Gaps = 36/256 (14%)
Query: 104 LGISCGLFHSS-LVVDGALWVWXXXXXXXXXXXHE--HPLFVPTLNPHLD--DVRSVALG 158
L IS G +HS+ + VDG L++W + + VPT L ++SVALG
Sbjct: 137 LHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEALHGITIQSVALG 196
Query: 159 GLHSVALVSPGEVFTWGYGG------------FGALGHAVYHRELLPRLVEGCWEGTIKH 206
HSVA+ GEV +WG GG FG L + E PRL++ + +
Sbjct: 197 SEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGIL---RSNSEFTPRLIKELEGIKVTN 253
Query: 207 IATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPI 266
+A H+A E G F + P + E+P
Sbjct: 254 VAAGLLHSACTDEN----GSAFMFGEKSINKMGFGGVRNA-------TTPSIISEVPYA- 301
Query: 267 AAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPV--PSLENVRIIQIASG 324
V+CGG+ T +T G+L+ WG+N N LG P V P LE+ + Q++ G
Sbjct: 302 EEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLEST-VSQVSCG 360
Query: 325 GYHSLALTDNGKVLSW 340
H+ A++DN V +W
Sbjct: 361 WKHTAAISDN-NVFTW 375
>AT1G19880.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr1:6900648-6903818 REVERSE
LENGTH=538
Length = 538
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 113/285 (39%), Gaps = 37/285 (12%)
Query: 137 EHPLFVPT-LNPHLD-DVRSVALG--GLHSVALVSPGEVFTWGYGGFGALGHAVYHRELL 192
E L PT L P + ++R VA G H VAL G +TWG G LGH +
Sbjct: 41 EGNLVSPTRLRPLVGVNIRFVATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDR 100
Query: 193 PRLVEGCWEGTIKHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGG 252
P +V G + I A HT +++ D L F G
Sbjct: 101 PTVVSGLSKHKIVKAAAGRNHTVVVSD---DGQSLGFGWNKYGQLGLGSAKN------GF 151
Query: 253 LSIPCKVKELPC----PIAAVSCGGFFTMAL--TEDGQLWNWGANSNYELGRG-DKIGGW 305
+S+ + LPC + V+CG FT+ L TE + G +LG G D
Sbjct: 152 VSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQYGQLGHGTDNEFNM 211
Query: 306 K-----------PRP--VPSLENVRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXS 352
K PRP + SL I+++A G H++A+ NG V +W
Sbjct: 212 KDSSVRLAYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFGGYGRLGHRE 271
Query: 353 IQNQKIPMVIEALATEHII----YISCGGSFSAAVTDKGKLYMWG 393
+++ P I+ +++ +S G + SA G+LYMWG
Sbjct: 272 QKDEWAPRRIDVFQRNNVLPPNAILSAGSANSACTAGGGQLYMWG 316
>AT3G26100.2 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538063-9540149 FORWARD
LENGTH=532
Length = 532
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Query: 276 TMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNG 335
++A+T G+++ +G N++ +LG G + +PV SL+ VRIIQ A+G ++ ++D+G
Sbjct: 155 SVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDG 214
Query: 336 KVLSWXXXXXXXXXXXSIQNQKI--PMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWG 393
KV + + + P ++ +L ++ + G F+A ++ +GK+Y +
Sbjct: 215 KVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFS 274
Query: 394 NASDSQLG 401
+D +LG
Sbjct: 275 WGNDGRLG 282
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 119/286 (41%), Gaps = 31/286 (10%)
Query: 161 HSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEF 220
HSVA+ S GEV+T+GY G LGH E + V I A AA T
Sbjct: 154 HSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAG----AARTML 209
Query: 221 LLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAV-----SCGGFF 275
+ D G+++ + G + P +L + + + G +F
Sbjct: 210 ISDDGKVY---------ACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYF 260
Query: 276 TMALTEDGQLWNWGANSNYELGRGDKIGGWKPRP-VPSLENVRIIQIASGGYHSLALT-- 332
T L+ +G+++ + ++ LG + +PRP + LENV ++QIA+G + LAL
Sbjct: 261 TAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQ 320
Query: 333 DNG-KVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHI--IYISCGGSFSAAVTDKGKL 389
NG V S S ++K P VIE ++ ++ G +A V G++
Sbjct: 321 PNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRV 380
Query: 390 YMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVATG 435
WG LG G +S P V +GL K + VATG
Sbjct: 381 CTWGWGRYGCLG-HGNEECESVPKVV------EGLSHVKAVHVATG 419
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 112/282 (39%), Gaps = 23/282 (8%)
Query: 139 PLFVPTLNPHLDDVRSV--ALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLV 196
P+ P L L ++ V A+G + L G+V+T+ +G G LGH ++ PR +
Sbjct: 236 PVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPL 295
Query: 197 EGCWEGT-IKHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSI 255
G E + IA + AL G + + +
Sbjct: 296 LGPLENVPVVQIAAGYCYLLALA--CQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIE- 352
Query: 256 PCKVKELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLEN 315
+ + L V+ G + + +DG++ WG LG G++ P+ V L +
Sbjct: 353 --QFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSH 410
Query: 316 VRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQK--------IPMVIEALA- 366
V+ + +A+G Y + ++D+G V S+ +++ P V+ +L
Sbjct: 411 VKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQ 470
Query: 367 -TEHIIYISCGGSF-----SAAVTDKGKLYMWGNASDSQLGV 402
E ++ IS S + A+T+ GKL+ +G QLG
Sbjct: 471 VNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGT 512
>AT3G26100.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr3:9538458-9540149 FORWARD
LENGTH=432
Length = 432
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Query: 276 TMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLENVRIIQIASGGYHSLALTDNG 335
++A+T G+++ +G N++ +LG G + +PV SL+ VRIIQ A+G ++ ++D+G
Sbjct: 55 SVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDG 114
Query: 336 KVLSWXXXXXXXXXXXSIQNQKI--PMVIEALATEHIIYISCGGSFSAAVTDKGKLYMWG 393
KV + + + P ++ +L ++ + G F+A ++ +GK+Y +
Sbjct: 115 KVYACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFS 174
Query: 394 NASDSQLG 401
+D +LG
Sbjct: 175 WGNDGRLG 182
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 119/286 (41%), Gaps = 31/286 (10%)
Query: 161 HSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLVEGCWEGTIKHIATSGTHTAALTEF 220
HSVA+ S GEV+T+GY G LGH E + V I A AA T
Sbjct: 54 HSVAVTSKGEVYTFGYNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAG----AARTML 109
Query: 221 LLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSIPCKVKELPCPIAAV-----SCGGFF 275
+ D G+++ + G + P +L + + + G +F
Sbjct: 110 ISDDGKVY---------ACGKESFGEAEYGGQGTKPVTTPQLVTSLKNIFVVQAAIGNYF 160
Query: 276 TMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPS-LENVRIIQIASGGYHSLALT-- 332
T L+ +G+++ + ++ LG + +PRP+ LENV ++QIA+G + LAL
Sbjct: 161 TAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPLLGPLENVPVVQIAAGYCYLLALACQ 220
Query: 333 DNG-KVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEHI--IYISCGGSFSAAVTDKGKL 389
NG V S S ++K P VIE ++ ++ G +A V G++
Sbjct: 221 PNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQFQILNLQPRVVAAGAWHAAVVGQDGRV 280
Query: 390 YMWGNASDSQLGVPGLPAIQSSPIEVNFLMEDDGLGPHKVLSVATG 435
WG LG G +S P V +GL K + VATG
Sbjct: 281 CTWGWGRYGCLG-HGNEECESVPKVV------EGLSHVKAVHVATG 319
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 110/282 (39%), Gaps = 23/282 (8%)
Query: 139 PLFVPTLNPHLDDVRSV--ALGGLHSVALVSPGEVFTWGYGGFGALGHAVYHRELLPRLV 196
P+ P L L ++ V A+G + L G+V+T+ +G G LGH ++ PR +
Sbjct: 136 PVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVEPRPL 195
Query: 197 EGCWEGT-IKHIATSGTHTAALTEFLLDVGELFFXXXXXXXXXXXXXXXXXXXHAGGLSI 255
G E + IA + AL G + + +
Sbjct: 196 LGPLENVPVVQIAAGYCYLLALA--CQPNGMSVYSVGCGLGGKLGHGSRTDEKYP---RV 250
Query: 256 PCKVKELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPVPSLEN 315
+ + L V+ G + + +DG++ WG LG G++ P+ V L +
Sbjct: 251 IEQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSH 310
Query: 316 VRIIQIASGGYHSLALTDNGKVLSWXXXXXXX--------XXXXSIQNQKIPMVIEALA- 366
V+ + +A+G Y + ++D+G V S+ N P V+ +L
Sbjct: 311 VKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSLKQ 370
Query: 367 -TEHIIYISCGGSF-----SAAVTDKGKLYMWGNASDSQLGV 402
E ++ IS S + A+T+ GKL+ +G QLG
Sbjct: 371 VNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGT 412
>AT5G11580.1 | Symbols: | Regulator of chromosome condensation
(RCC1) family protein | chr5:3718913-3721125 FORWARD
LENGTH=553
Length = 553
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 32/208 (15%)
Query: 260 KELPCPIAAVSCGGFFTMALTEDGQLWNWGANSNYELGRGDKIGGWKPRPV--PSL---E 314
++L I +++ G T+ALT DG +++WG LG G + P V P+ +
Sbjct: 12 EDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAEGD 71
Query: 315 NVRIIQIASGGYHSLALTDNGKVLSWXXXXXXXXXXXSIQNQKIPMVIEALATEH----- 369
+RI+ +A+G YHSLA++D+G V W +N P +I+ L
Sbjct: 72 RIRIVGVAAGAYHSLAVSDDGSVWCWGYNIYGQLGFDG-ENSLAPCLIKNLFERETSSSS 130
Query: 370 -------------IIYISCGGSFSAAVTDKGKLYMWGNA--SDSQLGVPGLPAIQSSPIE 414
+ + G S A+ + G L+MWGN DS+ P + + I
Sbjct: 131 LNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPD----PRLSFTSIP 186
Query: 415 VNFLMEDDGLGPHKVLSVATGASHAMCL 442
+ F + D VL VA G H + L
Sbjct: 187 IPFPILD--FHGRTVLKVACGDEHVVAL 212