Miyakogusa Predicted Gene

Lj1g3v3598300.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3598300.1 tr|A2Q2M3|A2Q2M3_MEDTR Trimeric LpxA-like
OS=Medicago truncatula GN=MtrDRAFT_AC151521g36v2 PE=4
SV=1,77.89,0,Hexapep,Bacterial transferase hexapeptide repeat;
PUTATIVE GLUCOSE-1-P-CYTIDYLYLTRANSFERASE,NULL; SU,CUFF.30955.1
         (287 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G21220.1 | Symbols:  | Trimeric LpxA-like enzymes superfamily...   340   7e-94
AT4G05210.1 | Symbols:  | Trimeric LpxA-like enzymes superfamily...   316   1e-86
AT4G29540.2 | Symbols:  | bacterial transferase hexapeptide repe...    56   3e-08
AT4G29540.1 | Symbols:  | bacterial transferase hexapeptide repe...    56   4e-08

>AT4G21220.1 | Symbols:  | Trimeric LpxA-like enzymes superfamily
           protein | chr4:11316978-11319067 REVERSE LENGTH=304
          Length = 304

 Score =  340 bits (872), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 164/221 (74%), Positives = 190/221 (85%)

Query: 60  FHKWHNGGGAFHESACIDSSAFVDVGAVVHSESVVGPDVRIGSGTVVGPSVNIGHSTRIG 119
           F +W NGGG  H SA I SSA V+ GAVVH ++V+G +V +GSGTV+GPSV+IG STRIG
Sbjct: 73  FLRWENGGGTCHSSAQIYSSALVEFGAVVHEKAVLGAEVHVGSGTVIGPSVDIGPSTRIG 132

Query: 120 FNVSLSNCCIGDSCVIHNGVSIGQDGFGFYVDSDGNMIKKPQLLNVVIRNHVEIGANTCI 179
           +NVS+SNC IGDSCVIHNGV IGQDGFGFYVD  GNM+KKPQ LNV I N VEIGANTCI
Sbjct: 133 YNVSISNCSIGDSCVIHNGVCIGQDGFGFYVDEHGNMVKKPQTLNVKIGNRVEIGANTCI 192

Query: 180 DRGSWRDTVIGDNSKIDNLVQIGHNVVIGNNCMLCGQVGIAGSATIGDYVTMGGRVAVRD 239
           DRGSWR+TVI D++KIDNLVQIGHNV+IG  C+LCGQVGIAGS TIGDYV +GGR AVRD
Sbjct: 193 DRGSWRETVIEDDTKIDNLVQIGHNVIIGKCCLLCGQVGIAGSVTIGDYVALGGRAAVRD 252

Query: 240 HVSIVSKVRLAAASCVTKDIKEPGAYGGFPAVSIYKWRREV 280
           HVSIVSKVRLAA SCVT++I EPG +GGFPAV I++WR+++
Sbjct: 253 HVSIVSKVRLAANSCVTRNITEPGDFGGFPAVPIHEWRKQI 293


>AT4G05210.1 | Symbols:  | Trimeric LpxA-like enzymes superfamily
           protein | chr4:2682867-2684867 FORWARD LENGTH=330
          Length = 330

 Score =  316 bits (809), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 163/254 (64%), Positives = 186/254 (73%), Gaps = 31/254 (12%)

Query: 54  GHFHGKFHKWHNGGGAFHESACIDSSAFVDVGAVVHSESVVGPDVRIGSGTVVGPSVNIG 113
           G+    F +W NGGG +H SA IDSSA V+ GAVVH E+++G +V IGS TV+G SV IG
Sbjct: 74  GNVEKGFLRWRNGGGMYHRSALIDSSALVEFGAVVHQEAILGAEVHIGSNTVIGSSVKIG 133

Query: 114 HSTRIGFNVSLSNCCIGDSCVIHNGVSIGQDGFGFYVDSDGNMIKKPQLLNVVIRNHVEI 173
            ST+IG      NC IGD CVIHNGV IGQDGFGFYVD +GNM+KKPQ LNV I N VEI
Sbjct: 134 PSTKIG------NCSIGDLCVIHNGVCIGQDGFGFYVDDNGNMVKKPQTLNVKIGNRVEI 187

Query: 174 GANTCIDRGSWRDTVIGDNSKIDNLVQIGHNVVIGNNCMLCGQVGIAGSATIGDYVTMGG 233
           GANTCIDRGSWRDTVIGD++KIDNLVQIGHNV+IG  C+ CGQVGIAGSA IGD+V +GG
Sbjct: 188 GANTCIDRGSWRDTVIGDDTKIDNLVQIGHNVIIGKCCLFCGQVGIAGSAEIGDFVALGG 247

Query: 234 RVAVRDHVSIVSKVRLAAASCVTKDIKEPGAYGGFPA----------------------- 270
           RVAVRDHVSIVSKVRLAA SCVTK+I EPG YGGFPA                       
Sbjct: 248 RVAVRDHVSIVSKVRLAANSCVTKNITEPGDYGGFPAYKKTEPDSAFASDKHCFILQKIL 307

Query: 271 --VSIYKWRREVAS 282
             V I++WRR++  
Sbjct: 308 IQVPIHQWRRQIVE 321


>AT4G29540.2 | Symbols:  | bacterial transferase hexapeptide
           repeat-containing protein | chr4:14497775-14499765
           FORWARD LENGTH=336
          Length = 336

 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 82/203 (40%), Gaps = 24/203 (11%)

Query: 83  DVGAVVHSESVVGPDVRIGSGTVVGPSVNIGHSTRIGFNVSL-------SNCCIGDSCVI 135
           D   ++H  +VV P+  IG G  VGP   IG S ++G    L        N  +G+SCV+
Sbjct: 36  DSEVLIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVL 95

Query: 136 HNGVSIGQDGFGFYVDSDGNMIKKPQLLNV---------------VIRNHVEIGANTCID 180
             G  +G +  G+      N+I    ++ V                I N+ EI     I 
Sbjct: 96  MTGAVVGDELPGYTFIGCNNIIGHHAVVGVKCQDLKYKHGDECFLCIGNNNEIREFCSIH 155

Query: 181 RGSW--RDTVIGDNSKIDNLVQIGHNVVIGNNCMLCGQVGIAGSATIGDYVTMGGRVAVR 238
           R S     TVIGDN+ I     I H+  IG+  +      +AG   + D     G   V 
Sbjct: 156 RSSKPSDKTVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAGHVVVEDNTHTAGASVVH 215

Query: 239 DHVSIVSKVRLAAASCVTKDIKE 261
               I S   +   S V++D+ +
Sbjct: 216 QFCHIGSFAFIGGGSVVSQDVPK 238


>AT4G29540.1 | Symbols:  | bacterial transferase hexapeptide
           repeat-containing protein | chr4:14497775-14499765
           FORWARD LENGTH=334
          Length = 334

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 82/203 (40%), Gaps = 24/203 (11%)

Query: 83  DVGAVVHSESVVGPDVRIGSGTVVGPSVNIGHSTRIGFNVSL-------SNCCIGDSCVI 135
           D   ++H  +VV P+  IG G  VGP   IG S ++G    L        N  +G+SCV+
Sbjct: 36  DSEVLIHPSAVVHPNAVIGKGVSVGPYCTIGSSVKLGNGCKLYPSSHVFGNTELGESCVL 95

Query: 136 HNGVSIGQDGFGFYVDSDGNMIKKPQLLNV---------------VIRNHVEIGANTCID 180
             G  +G +  G+      N+I    ++ V                I N+ EI     I 
Sbjct: 96  MTGAVVGDELPGYTFIGCNNIIGHHAVVGVKCQDLKYKHGDECFLCIGNNNEIREFCSIH 155

Query: 181 RGSW--RDTVIGDNSKIDNLVQIGHNVVIGNNCMLCGQVGIAGSATIGDYVTMGGRVAVR 238
           R S     TVIGDN+ I     I H+  IG+  +      +AG   + D     G   V 
Sbjct: 156 RSSKPSDKTVIGDNNLIMGSCHIAHDCKIGDRNIFANNTLLAGHVVVEDNTHTAGASVVH 215

Query: 239 DHVSIVSKVRLAAASCVTKDIKE 261
               I S   +   S V++D+ +
Sbjct: 216 QFCHIGSFAFIGGGSVVSQDVPK 238