Miyakogusa Predicted Gene
- Lj1g3v3590740.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3590740.1 CUFF.30925.1
(453 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 500 e-142
AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556... 371 e-103
AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556... 371 e-103
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 294 1e-79
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 247 1e-65
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 246 2e-65
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 245 4e-65
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 241 8e-64
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 234 1e-61
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 233 2e-61
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 232 4e-61
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 223 2e-58
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 204 9e-53
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 169 4e-42
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 162 3e-40
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 137 1e-32
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 132 5e-31
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 132 5e-31
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 127 1e-29
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 125 7e-29
AT3G01400.1 | Symbols: | ARM repeat superfamily protein | chr3:... 122 4e-28
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 116 4e-26
AT5G58680.1 | Symbols: | ARM repeat superfamily protein | chr5:... 113 2e-25
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 113 2e-25
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 107 2e-23
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 107 2e-23
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 104 2e-22
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 103 3e-22
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 101 9e-22
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 100 3e-21
AT5G40140.1 | Symbols: | RING/U-box superfamily protein with AR... 99 4e-21
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 98 1e-20
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 96 4e-20
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 95 8e-20
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 95 8e-20
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 95 1e-19
AT5G62560.1 | Symbols: | RING/U-box superfamily protein with AR... 93 3e-19
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 89 4e-18
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 89 8e-18
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 87 3e-17
AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 | chr5:26... 85 1e-16
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 85 1e-16
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 83 5e-16
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 80 3e-15
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 79 9e-15
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 77 3e-14
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 75 8e-14
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 75 1e-13
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 75 1e-13
AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 | chr3:17644434-17... 73 4e-13
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 73 4e-13
AT2G45910.1 | Symbols: | U-box domain-containing protein kinase... 71 1e-12
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 70 4e-12
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 69 5e-12
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 69 7e-12
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 68 1e-11
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 66 5e-11
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 66 5e-11
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 65 1e-10
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 64 1e-10
AT1G08315.1 | Symbols: | ARM repeat superfamily protein | chr1:... 61 2e-09
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 61 2e-09
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 58 1e-08
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 58 1e-08
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 58 1e-08
AT1G56030.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 3e-08
AT5G61560.1 | Symbols: | U-box domain-containing protein kinase... 57 3e-08
AT5G61550.2 | Symbols: | U-box domain-containing protein kinase... 57 3e-08
AT5G61560.2 | Symbols: | U-box domain-containing protein kinase... 57 3e-08
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 56 6e-08
AT5G61550.1 | Symbols: | U-box domain-containing protein kinase... 55 1e-07
AT3G03440.1 | Symbols: | ARM repeat superfamily protein | chr3:... 52 9e-07
AT4G31890.2 | Symbols: | ARM repeat superfamily protein | chr4:... 49 5e-06
AT4G31890.1 | Symbols: | ARM repeat superfamily protein | chr4:... 49 5e-06
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 500 bits (1287), Expect = e-142, Method: Compositional matrix adjust.
Identities = 260/462 (56%), Positives = 337/462 (72%), Gaps = 11/462 (2%)
Query: 1 MAKPGVLDSDPEA-KNITELKKELQRLVRSIVDDEDCSAEAIDQAKETXXXXXXXXXXXX 59
MAK GV DSDP A ELK+E+++L+ I D++D + IDQ ++
Sbjct: 1 MAKTGVFDSDPTAIAKAKELKREMKKLLIKIDDEDDLGVQTIDQLQDALSALREATMRKM 60
Query: 60 XXXXXXXQ-KTVVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQ 118
+TV P+EF+CP+S ELM+DPV++ASGQTYD+ FIQKWL++GN+TCP+T Q
Sbjct: 61 AKSSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQ 120
Query: 119 VLAHTLLIPNHLVREMIEQWSKKQGLES-----PNTVPYINEEAIKEADSDHFLCLLEKM 173
VL HT L PN L+REMI +W KK GLE+ PN V +E + +D + F LL K+
Sbjct: 121 VLPHTALTPNLLIREMISKWCKKNGLETKSQYHPNLVN--EDETVTRSDREIFNSLLCKV 178
Query: 174 SST-LSDQKAAAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITT 232
SS+ L DQK+AAKELRLLT+K +RALF ++ D I +L+ P+ ++ D L+EDV+TT
Sbjct: 179 SSSNLQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTT 238
Query: 233 LLNISIHD-SNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKS 291
LLNISIHD SNKK V E P VIPLL+ ALR GT+ TRSNAAAAIFTLSALDSNK LIGKS
Sbjct: 239 LLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKS 298
Query: 292 DALKPLIELLEEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAES 351
LKPLI+LLEEG+PL +KDV++AIF++C+ HENR+RAV+DGAVRV+ K+ N ++V E
Sbjct: 299 GILKPLIDLLEEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDEL 358
Query: 352 LAILALLSTHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEV 411
LAILA+L TH AV+++GELG V LL I RE C+R+KEN + IL IC DR+K KE+
Sbjct: 359 LAILAMLVTHWKAVEELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRTKWKEI 418
Query: 412 RDEENSHRTISELARTGTSRAKRKATGILDRLNKIVNITHTA 453
++EEN+H TI++L+R GTSRA+RKA GILDRL K +N+THTA
Sbjct: 419 KEEENAHGTITKLSREGTSRAQRKANGILDRLRKAMNLTHTA 460
>AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2355636-2356613 FORWARD LENGTH=325
Length = 325
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/327 (59%), Positives = 249/327 (76%), Gaps = 9/327 (2%)
Query: 134 MIEQWSKKQGLES-----PNTVPYINEEAIKEADSDHFLCLLEKMSST-LSDQKAAAKEL 187
MI +W KK GLE+ PN V +E + +D + F LL K+SS+ L DQK+AAKEL
Sbjct: 1 MISKWCKKNGLETKSQYHPNLVN--EDETVTRSDREIFNSLLCKVSSSNLQDQKSAAKEL 58
Query: 188 RLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHD-SNKKPV 246
RLLT+K +RALF ++ D I +L+ P+ ++ D L+EDV+TTLLNISIHD SNKK V
Sbjct: 59 RLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSNKKLV 118
Query: 247 AETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELLEEGHP 306
E P VIPLL+ ALR GT+ TRSNAAAAIFTLSALDSNK LIGKS LKPLI+LLEEG+P
Sbjct: 119 CENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNP 178
Query: 307 LTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAESLAILALLSTHHTAVQ 366
L +KDV++AIF++C+ HENR+RAV+DGAVRV+ K+ N ++V E LAILA+L TH AV+
Sbjct: 179 LAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTHWKAVE 238
Query: 367 DMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENSHRTISELAR 426
++GELG V LL I RE C+R+KEN + IL IC DR+K KE+++EEN+H TI++L+R
Sbjct: 239 ELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSR 298
Query: 427 TGTSRAKRKATGILDRLNKIVNITHTA 453
GTSRA+RKA GILDRL K +N+THTA
Sbjct: 299 EGTSRAQRKANGILDRLRKAMNLTHTA 325
>AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2355636-2356613 FORWARD LENGTH=325
Length = 325
Score = 371 bits (953), Expect = e-103, Method: Compositional matrix adjust.
Identities = 195/327 (59%), Positives = 249/327 (76%), Gaps = 9/327 (2%)
Query: 134 MIEQWSKKQGLES-----PNTVPYINEEAIKEADSDHFLCLLEKMSST-LSDQKAAAKEL 187
MI +W KK GLE+ PN V +E + +D + F LL K+SS+ L DQK+AAKEL
Sbjct: 1 MISKWCKKNGLETKSQYHPNLVN--EDETVTRSDREIFNSLLCKVSSSNLQDQKSAAKEL 58
Query: 188 RLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHD-SNKKPV 246
RLLT+K +RALF ++ D I +L+ P+ ++ D L+EDV+TTLLNISIHD SNKK V
Sbjct: 59 RLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSNKKLV 118
Query: 247 AETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELLEEGHP 306
E P VIPLL+ ALR GT+ TRSNAAAAIFTLSALDSNK LIGKS LKPLI+LLEEG+P
Sbjct: 119 CENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLLEEGNP 178
Query: 307 LTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAESLAILALLSTHHTAVQ 366
L +KDV++AIF++C+ HENR+RAV+DGAVRV+ K+ N ++V E LAILA+L TH AV+
Sbjct: 179 LAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTHWKAVE 238
Query: 367 DMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENSHRTISELAR 426
++GELG V LL I RE C+R+KEN + IL IC DR+K KE+++EEN+H TI++L+R
Sbjct: 239 ELGELGGVSWLLKITRESECKRNKENAIVILHTICFSDRTKWKEIKEEENAHGTITKLSR 298
Query: 427 TGTSRAKRKATGILDRLNKIVNITHTA 453
GTSRA+RKA GILDRL K +N+THTA
Sbjct: 299 EGTSRAQRKANGILDRLRKAMNLTHTA 325
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/390 (43%), Positives = 250/390 (64%), Gaps = 21/390 (5%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
V P EF C +S +M +PVI+ASGQTY++ +I +WL +TCP+T QVL+H L IPNH
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLWIPNH 128
Query: 130 LVREMIEQWS--KKQGLESPNTVPYINEEAIKEADSDHFLCLLEKMSST--LSDQKAAAK 185
L+ ++I QW K + P+ +E + E + LL+++SS+ ++DQ AAK
Sbjct: 129 LISDLITQWCLVNKYDHQKPS------DELVAELFTSDIEALLQRVSSSSSVADQIEAAK 182
Query: 186 ELRLLTKKHPCYRALF-ADTEDGIPQLLKPICE-SNSLDS--DLREDVITTLLNISIHDS 241
ELR TKK P R F A D I +LL P+ ++DS +L+E+++T L N+SI +S
Sbjct: 183 ELRHQTKKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSILES 242
Query: 242 NKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELL 301
NK +AE +VIPLL K+L+ GT ETR NAAA + +LSA+DSNK +IG S+A+K LI+L+
Sbjct: 243 NKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLI 302
Query: 302 EEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAESLAILALLSTH 361
EEG L K+ +S +F++C++ EN+ + V G + K+K +V E L++LAL+STH
Sbjct: 303 EEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVDELLSLLALISTH 362
Query: 362 HTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLY----DRSKLKEVRDEENS 417
+ AV++M +LG + L SI+R+ + EN V I+ +Y DRS+LK V +EEN
Sbjct: 363 NRAVEEMDKLGFIYDLFSILRKPSSLLTGENAVVIV--FNMYDRNRDRSRLKVVGEEENQ 420
Query: 418 HRTISELARTGTSRAKRKATGILDRLNKIV 447
H T ++LA+ G+ RA RKA GIL + + V
Sbjct: 421 HGTFTKLAKQGSVRAARKAQGILQWIKRFV 450
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 146/386 (37%), Positives = 228/386 (59%), Gaps = 19/386 (4%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P+EF+CPIS ELM DPVIV+SGQTY+R I+KWL G+ TCP+T + L ++ PN+++R
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLR 316
Query: 133 EMIEQWSKKQGLESPNTVPYI------NEEAIKEADSDHFLC---LLEKMSSTLSDQKAA 183
+I QW + G+E P P I + D +H LL+ S D+++A
Sbjct: 317 SLIAQWCESNGIEPPKR-PNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRRSA 375
Query: 184 AKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHDSNK 243
A E+RLL K++ R A + IP L+ + SN DS +E +T++LN+SI NK
Sbjct: 376 AGEIRLLAKQNNHNRVAIAAS-GAIPLLVNLLTISN--DSRTQEHAVTSILNLSICQENK 432
Query: 244 KPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELLEE 303
+ + +P ++ L+ G++E R NAAA +F+LS +D NK IG + A+ PL+ LL E
Sbjct: 433 GKIVYSSGAVPGIVHVLQKGSMEARENAAATLFSLSVIDENKVTIGAAGAIPPLVTLLSE 492
Query: 304 GHPLTMKDVSSAIFSICLIHENRARAVKDGAVRV---ILTKVKNRIHVAESLAILALLST 360
G KD ++A+F++C+ N+ +AV+ G V V +LT+ ++ + V ESL+ILA+LS+
Sbjct: 493 GSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLMRLLTEPESGM-VDESLSILAILSS 551
Query: 361 HHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENSHRT 420
H ++G AVP L+ +R G R+KEN A+L +C +++ L E + +
Sbjct: 552 HPDGKSEVGAADAVPVLVDFIRSG-SPRNKENSAAVLVHLCSWNQQHLIEAQ-KLGIMDL 609
Query: 421 ISELARTGTSRAKRKATGILDRLNKI 446
+ E+A GT R KRKA +L+R ++
Sbjct: 610 LIEMAENGTDRGKRKAAQLLNRFSRF 635
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/394 (38%), Positives = 234/394 (59%), Gaps = 15/394 (3%)
Query: 67 QKTVVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLI 126
++ V P+ F+CPIS ELMKDPVIV++GQTY+R IQKWL+AG++TCP++ + L H L
Sbjct: 243 HRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLT 302
Query: 127 PNHLVREMIEQWSKKQGLESPNT-----VPYINEEAIKEADSDHFLCLLEKMSS-TLSDQ 180
PN++++ +I W + G+E P I + + D L LLEK+++ T Q
Sbjct: 303 PNYVLKSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTTEQQ 362
Query: 181 KAAAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHD 240
+AAA ELRLL K++ R A+ IP L++ + +S D +E +T LLN+SI++
Sbjct: 363 RAAAGELRLLAKRNVDNRVCIAEA-GAIPLLVELL---SSPDPRTQEHSVTALLNLSINE 418
Query: 241 SNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIEL 300
NK + + + +++ L+ G++E R NAAA +F+LS +D NK IG + A++ LI L
Sbjct: 419 GNKGAIVDAGAITD-IVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISL 477
Query: 301 LEEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVI--LTKVKNRIHVAESLAILALL 358
LEEG KD ++AIF++C+ N++RAVK G V + L K V E+LAILA+L
Sbjct: 478 LEEGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAIL 537
Query: 359 STHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENSH 418
ST+ + E ++P L+ I+R G R++EN AIL +C+ + +L R E +
Sbjct: 538 STNQEGKTAIAEAESIPVLVEIIRTG-SPRNRENAAAILWYLCIGNIERLNVAR-EVGAD 595
Query: 419 RTISELARTGTSRAKRKATGILDRLNKIVNITHT 452
+ EL GT RAKRKA +L+ + + + T
Sbjct: 596 VALKELTENGTDRAKRKAASLLELIQQTEGVAVT 629
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 245 bits (626), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/388 (37%), Positives = 229/388 (59%), Gaps = 16/388 (4%)
Query: 67 QKTVVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLI 126
QK V PD+F+CPIS E+M+DPVIV+SGQTY+R I+KW+ G+ TCP+T Q L T L
Sbjct: 251 QKIPVIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLT 310
Query: 127 PNHLVREMIEQWSKKQGLESPNTVPYINEEAIKEADSDHFLCLLEKMSSTLS-----DQK 181
PN+++R +I QW + +E P + + S +E + L+ DQ+
Sbjct: 311 PNYVLRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLAYGNPEDQR 370
Query: 182 AAAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHDS 241
+AA E+RLL K++ R A+ IP L+ + ++ DS ++E +T LLN+SI ++
Sbjct: 371 SAAGEIRLLAKRNADNRVAIAEA-GAIPLLVGLL---STPDSRIQEHSVTALLNLSICEN 426
Query: 242 NKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELL 301
NK + + IP +++ L+ G++E R NAAA +F+LS +D NK IG A+ PL+ LL
Sbjct: 427 NKGAIV-SAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLL 485
Query: 302 EEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRV---ILTKVKNRIHVAESLAILALL 358
EG KD ++A+F++C+ N+ +A++ G + +LT+ + + V E+LAILA+L
Sbjct: 486 NEGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGM-VDEALAILAIL 544
Query: 359 STHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENSH 418
S+H +G AVPSL+ +R G R++EN A+L +C D L E + +
Sbjct: 545 SSHPEGKAIIGSSDAVPSLVEFIRTG-SPRNRENAAAVLVHLCSGDPQHLVEAQ-KLGLM 602
Query: 419 RTISELARTGTSRAKRKATGILDRLNKI 446
+ +LA GT R KRKA +L+R++++
Sbjct: 603 GPLIDLAGNGTDRGKRKAAQLLERISRL 630
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 241 bits (615), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 139/380 (36%), Positives = 225/380 (59%), Gaps = 13/380 (3%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
+ P +F CP+S ELMKDPVIVA+GQTY+R +IQ+W++ GN TCP+T Q L + L PN+
Sbjct: 239 LTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNY 298
Query: 130 LVREMIEQWSKKQGLESPNTVPYINEEAIKEADSDHFLCLLEKMSS-TLSDQKAAAKELR 188
++R +I +W + +E P YIN D L++++SS + D++ A E+R
Sbjct: 299 VLRSLISRWCAEHNIEQP--AGYINGRTKNSGDMSVIRALVQRLSSRSTEDRRNAVSEIR 356
Query: 189 LLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHDSNKKPVAE 248
L+K+ R L A+ IP L+ + S D +E+ IT +LN+SI+++NK+ +
Sbjct: 357 SLSKRSTDNRILIAEA-GAIPVLVNLL---TSEDVATQENAITCVLNLSIYENNKELIMF 412
Query: 249 TPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELLEEGHPLT 308
V +++ LR GT+E R NAAA +F+LS D NK +IG S A+ L++LLE G P
Sbjct: 413 AGAVTS-IVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGAIPALVDLLENGTPRG 471
Query: 309 MKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIH---VAESLAILALLSTHHTAV 365
KD ++A+F++C+ H N+ RAV+ G V ++ + + V E+L IL++L+ + A
Sbjct: 472 KKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILSVLANNQDAK 531
Query: 366 QDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENSHRTISELA 425
+ + +P+L+ I++ R++EN AIL ++C D KL + + + +L+
Sbjct: 532 SAIVKANTLPALIGILQTDQT-RNRENAAAILLSLCKRDTEKLITI-GRLGAVVPLMDLS 589
Query: 426 RTGTSRAKRKATGILDRLNK 445
+ GT R KRKA +L+ L K
Sbjct: 590 KNGTERGKRKAISLLELLRK 609
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 148/389 (38%), Positives = 227/389 (58%), Gaps = 17/389 (4%)
Query: 69 TVVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPN 128
+V P EFKC +SK +M DPVI+ SGQTY++ +I +WLN + TCP QVL L PN
Sbjct: 71 SVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWLN-HDLTCPTAKQVLYRVCLTPN 129
Query: 129 HLVREMIEQWSKKQGLESPNTVPYINEEAIKEADSDHFLCLLEKMSS---TLSDQKAAAK 185
HL+ E+I +W + P P + + + E +D LL+++SS +++DQ AAK
Sbjct: 130 HLINELITRWCLANKYDRPAPKPS-DIDYVTELFTDGIESLLQRISSPSSSVADQTEAAK 188
Query: 186 ELRLLTKKHPCYRALF-ADTEDGIPQLLKPICE-SNSLDSD--LREDVITTLLNISIHDS 241
EL L T+K R F + D I +LL P+ + +DS+ L+E+++T L N+S +
Sbjct: 189 ELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPELQENIVTALFNMSTFEK 248
Query: 242 NKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELL 301
NK +AE VIPLL K+++ G++ TR NA + +LS +DSNK +IG S ALK LI+L+
Sbjct: 249 NKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIGNSVALKALIDLI 308
Query: 302 EEGHPLT-MKDVSSAIFSICLI-HENRARAVKDGAVRVILTKVKNRIHVAESLAILALLS 359
E L+ D A+ +C EN +A+ G + +K R ++ ESLA LAL+S
Sbjct: 309 GELDDLSATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNIKARRNLFESLAALALIS 368
Query: 360 THHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVR----DEE 415
H +Q++ LG + LLSI+R+ C + EN V I+ +Y +S+ + ++ +EE
Sbjct: 369 PHERVIQEVANLGVIYDLLSILRKTSCMVTCENAVVIVGN--MYAKSRERSIKKILAEEE 426
Query: 416 NSHRTISELARTGTSRAKRKATGILDRLN 444
N H+T +++A G+ A KA GIL +N
Sbjct: 427 NQHKTFTKIATQGSVVAVMKAQGILQCIN 455
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 228/388 (58%), Gaps = 20/388 (5%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
+ P++F CPIS ELMKDP IV++GQTY+R FIQ+W++ GN +CP+T Q L + L PN+
Sbjct: 93 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNY 152
Query: 130 LVREMIEQWSKKQGLESPNTVPYIN------EEAIKE--ADSDHFLCLLEKMSS-TLSDQ 180
++R +I QW K +E P Y+N + + ++ D L+ K+SS ++ D+
Sbjct: 153 VLRSLISQWCTKHNIEQPGG--YMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDR 210
Query: 181 KAAAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHD 240
+ A E+R L+K+ R L A+ IP L+K + D++ +E+ +T +LN+SI++
Sbjct: 211 RTAVSEIRSLSKRSTDNRILIAEA-GAIPVLVKLLTSDG--DTETQENAVTCILNLSIYE 267
Query: 241 SNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIEL 300
NK+ + V +++ LR G++E R NAAA +F+LS D NK +IG S A+ L++L
Sbjct: 268 HNKELIMLAGAVTSIVL-VLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDL 326
Query: 301 LEEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVI---LTKVKNRIHVAESLAILAL 357
L+ G KD ++A+F++C+ N+ RAV+ G V+ + LT + E+L IL++
Sbjct: 327 LQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSV 386
Query: 358 LSTHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENS 417
L+++ A + A+P L+ +++ R++EN AIL +C D KL + +
Sbjct: 387 LASNQVAKTAILRANAIPPLIDCLQKDQ-PRNRENAAAILLCLCKRDTEKLISI-GRLGA 444
Query: 418 HRTISELARTGTSRAKRKATGILDRLNK 445
+ EL+R GT RAKRKA +L+ L K
Sbjct: 445 VVPLMELSRDGTERAKRKANSLLELLRK 472
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/388 (35%), Positives = 228/388 (58%), Gaps = 20/388 (5%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
+ P++F CPIS ELMKDP IV++GQTY+R FIQ+W++ GN +CP+T Q L + L PN+
Sbjct: 241 LTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPNY 300
Query: 130 LVREMIEQWSKKQGLESPNTVPYIN------EEAIKE--ADSDHFLCLLEKMSS-TLSDQ 180
++R +I QW K +E P Y+N + + ++ D L+ K+SS ++ D+
Sbjct: 301 VLRSLISQWCTKHNIEQPGG--YMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIEDR 358
Query: 181 KAAAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHD 240
+ A E+R L+K+ R L A+ IP L+K + D++ +E+ +T +LN+SI++
Sbjct: 359 RTAVSEIRSLSKRSTDNRILIAEA-GAIPVLVKLLTSDG--DTETQENAVTCILNLSIYE 415
Query: 241 SNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIEL 300
NK+ + V +++ LR G++E R NAAA +F+LS D NK +IG S A+ L++L
Sbjct: 416 HNKELIMLAGAVTSIVL-VLRAGSMEARENAAATLFSLSLADENKIIIGASGAIMALVDL 474
Query: 301 LEEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVI---LTKVKNRIHVAESLAILAL 357
L+ G KD ++A+F++C+ N+ RAV+ G V+ + LT + E+L IL++
Sbjct: 475 LQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMADEALTILSV 534
Query: 358 LSTHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENS 417
L+++ A + A+P L+ +++ R++EN AIL +C D KL + +
Sbjct: 535 LASNQVAKTAILRANAIPPLIDCLQKDQ-PRNRENAAAILLCLCKRDTEKLISI-GRLGA 592
Query: 418 HRTISELARTGTSRAKRKATGILDRLNK 445
+ EL+R GT RAKRKA +L+ L K
Sbjct: 593 VVPLMELSRDGTERAKRKANSLLELLRK 620
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 139/387 (35%), Positives = 215/387 (55%), Gaps = 19/387 (4%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
V P EF C +S ++M +P+++ASGQT+++ +I +WL +TCP+T QVL H +IPNH
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLK-HERTCPRTKQVLYHRFMIPNH 121
Query: 130 LVREMIEQWSKKQGLESPNTVPYINEEAIKEADSDHFLCLLEKMSS--TLSDQKAAAKEL 187
L+ E+I++W + P T ++E I D LL+++SS ++ DQ AAKEL
Sbjct: 122 LINEVIKEWCLIHNFDRPKT----SDEVIDLFTGD-LESLLQRISSPSSVEDQTEAAKEL 176
Query: 188 RLLTKKHPCYRALF-ADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHDSNKKPV 246
L K+ F A D I +LL P+ S + + E+++T L S + NK V
Sbjct: 177 ALKAKRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFSTSEKNKTLV 236
Query: 247 AETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELLEEGHP 306
AE P+V+PLL K ++ GT+ TR ++AA + +LS DSNK +IG S+ LK LI ++EEG
Sbjct: 237 AENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGNSEVLKALIHVIEEGDS 296
Query: 307 LTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAESLAILALLST-HHTAV 365
L + SA+ ++C + E +AV +G +R + K+K +V+ L++LA +ST +H
Sbjct: 297 LATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSMLLSLLAFVSTQNHQTT 356
Query: 366 QDMGELGAVPSLLSIMREGLCERSKENCVAILQAIC---------LYDRSKLKEVRDEEN 416
++M LG + L SI+R + EN V I+ IC + K V +EEN
Sbjct: 357 EEMDNLGLIYDLFSILRNSNSLVNDENAVVIVYNICKSYKALQNVVLREEKRDVVLEEEN 416
Query: 417 SHRTISELARTGTSRAKRKATGILDRL 443
H T + L RA A IL+ +
Sbjct: 417 KHGTFTRLENQEAGRATSLAKRILEWI 443
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 204 bits (519), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 133/380 (35%), Positives = 230/380 (60%), Gaps = 13/380 (3%)
Query: 69 TVVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPN 128
+++ P EF CPI+ E+M DPVI+A+GQTY++ IQKW +AG++TCP+T Q L H L PN
Sbjct: 287 SLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPN 346
Query: 129 HLVREMIEQWSKKQGLESPNTVPYINEEAIKEADSDHFLCLLEKMSST-LSDQKAAAKEL 187
++ +I QW +K + P ++ ++ E D L+E +SS+ L +Q+ + K++
Sbjct: 347 FALKNLIMQWCEKNNFKIPEK--EVSPDSQNE-QKDEVSLLVEALSSSQLEEQRRSVKQM 403
Query: 188 RLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHDSNKKPVA 247
RLL +++P R L A+ IP L++ + DS ++E+ +TTLLN+SI + NKK ++
Sbjct: 404 RLLARENPENRVLIANA-GAIPLLVQLLSYP---DSGIQENAVTTLLNLSIDEVNKKLIS 459
Query: 248 ETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELLEEGHPL 307
IP +++ L G E R N+AAA+F+LS LD NK IG S+ + PL++LL+ G
Sbjct: 460 NEG-AIPNIIEILENGNREARENSAAALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLR 518
Query: 308 TMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIH--VAESLAILALLSTHHTAV 365
KD +A+F++ L N+ RA+ G V+ +L +K++ + E+L+IL LL++H
Sbjct: 519 GKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILLLLASHPEGR 578
Query: 366 QDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENSHRTISELA 425
Q +G+L + +L+ +R+G ++KE ++L + + S + + + + E+
Sbjct: 579 QAIGQLSFIETLVEFIRQG-TPKNKECATSVLLELGSNNSSFILAAL-QFGVYEYLVEIT 636
Query: 426 RTGTSRAKRKATGILDRLNK 445
+GT+RA+RKA ++ ++K
Sbjct: 637 TSGTNRAQRKANALIQLISK 656
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 124/389 (31%), Positives = 203/389 (52%), Gaps = 29/389 (7%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
+ P +F CPIS +LM DPVI+++GQTYDR I +W+ G+ TCP+T Q+L + ++PN
Sbjct: 303 ITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNR 362
Query: 130 LVREMIEQWSKKQGL-------ESPN--TVPYINEEAIKEADSDHFLCLLEKMS-STLSD 179
++ +I QW G+ +SPN + +A EA+ L++ ++ + +
Sbjct: 363 ALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAA 422
Query: 180 QKAAAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIH 239
Q AA+E+RLL K RA A+ IP L + + N++ +E+ +T +LN+SI+
Sbjct: 423 QTVAAREIRLLAKTGKENRAYIAEA-GAIPHLCRLLTSENAI---AQENSVTAMLNLSIY 478
Query: 240 DSNKKPVAETPMVIPLLMKALRTG-TIETRSNAAAAIFTLSALDSNKELIGKSD-ALKPL 297
+ NK + E + ++ L +G T+E + NAAA +F+LSA+ K+ I D ++ L
Sbjct: 479 EKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEAL 538
Query: 298 IELLEEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAESLAILAL 357
LL+ G P KD +A++++ +N +R ++ G V ++ +KN E +A A
Sbjct: 539 ALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKN-----EGVAEEAA 593
Query: 358 LSTHHTAVQDMG------ELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKE- 410
+ Q +G E AV L+ +MR G R KEN VA L +C + + E
Sbjct: 594 GALALLVRQSLGAEAIGKEDSAVAGLMGMMRCG-TPRGKENAVAALLELCRSGGAAVAEK 652
Query: 411 VRDEENSHRTISELARTGTSRAKRKATGI 439
V + L TGT RA+RKA +
Sbjct: 653 VLRAPAIAGLLQTLLFTGTKRARRKAASL 681
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/391 (30%), Positives = 201/391 (51%), Gaps = 38/391 (9%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P +F+CPI+ ELM+DPV+VA+GQTYDR I W+ +G+ TCP+T QVL HT L+PN ++
Sbjct: 275 PADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRALK 334
Query: 133 EMIEQWSKKQGL-----ESPNTVPYINEEAIKEADSDHFLCLLEKMSSTLSDQKAAAKEL 187
+I W + Q + P +EA+ E L+EK+S ++D EL
Sbjct: 335 NLIVLWCRDQKIPFELYGDGGGEPAPCKEAV-EFTKMMVSFLIEKLS--VADSNGVVFEL 391
Query: 188 RLLTKKHPCYRALFADTEDGIPQLLKPI---CESNSLDSDLREDVITTLLNISIHDSNKK 244
R L K RA A+ IP+L++ + C S L+ + +TT+LN+SI + NK
Sbjct: 392 RALAKSDTVARACIAEA-GAIPKLVRYLATECPS------LQINAVTTILNLSILEQNKT 444
Query: 245 PVAETPMVIPLLMKALRTG-TIETRSNAAAAIFTLSALDSNKELIG-KSDALKPLIELLE 302
+ ET + +++ LR+G T E ++NAAA +F+L+ + + + +G K+ + L++L +
Sbjct: 445 RIMETDGALNGVIEVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAK 504
Query: 303 EGHPLTMKDVSSAIFSICLIHENRARAVKDG-------AVRVILTKVKNRIHVAESLAIL 355
+G + +D AI ++ EN R V+ G A + + + + L
Sbjct: 505 QGPTSSKRDALVAILNLVAERENVGRFVEAGVMGAAGDAFQELPEEAVAVVEAVVRRGGL 564
Query: 356 ALLSTHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKL-KEVRDE 414
+S + ++ +GE +MREG + ++E+ A L +C S+L E+
Sbjct: 565 MAVSAAFSLIRLLGE---------VMREG-ADTTRESAAATLVTMCRKGGSELVAEMAAI 614
Query: 415 ENSHRTISELARTGTSRAKRKATGILDRLNK 445
R I E+ GT+R RKA ++ L +
Sbjct: 615 PGIERVIWEMIGAGTARGGRKAASLMRYLRR 645
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 117/465 (25%), Positives = 208/465 (44%), Gaps = 103/465 (22%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
V P +F+C +S ELM DPVIVASGQT++R FIQKW++ G CP+T Q L+HT L PN
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNF 297
Query: 130 LVREMIEQWSKKQGLESPNTVPYINEEAIKEADSDHFLCLLEKMSSTLSDQKAA----AK 185
+VR + W + + P+ + I+ S+ F L+E + ++ S+ + A+
Sbjct: 298 IVRAFLASWCETNNVYPPDPLELIH-------SSEPFPLLVESVRASSSENGHSESLDAE 350
Query: 186 ELRLLTKKHPCYRALFADT--------------------------------EDG-IPQLL 212
ELR + + + ++ G IP +
Sbjct: 351 ELRQVFSRSASAPGIVSEVVCKTKRNNNAAADRSLTRSNTPWKFPEERHWRHPGIIPATV 410
Query: 213 KPICESNSLDSDLR---EDVITTLLN-----------ISIHDSNKKPVAETPMVIPLLMK 258
+ S+S++++++ +D+ ++ L+ ++ + ++ + V IP L+
Sbjct: 411 RETGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVS 470
Query: 259 ALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELLEEGH------------- 305
L + +++A + LS D+NK LI +S A+ PLI +L+ G+
Sbjct: 471 LLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATLF 530
Query: 306 -------------------PLT----------MKDVSSAIFSICLIHENRARAVKDGAVR 336
PL KD ++A+F++ + HEN+ + ++ GAVR
Sbjct: 531 SLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEAGAVR 590
Query: 337 VILTKVKNRIHVAE-SLAILALLSTHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVA 395
++ + + E ++ +LA L+T +GE G +P L+ ++ G R KEN A
Sbjct: 591 YLVELMDPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELG-SARGKENATA 649
Query: 396 ILQAICLYDRSKLKEVRDEENSHRTISELARTGTSRAKRKATGIL 440
L +C + V E + L ++GT+R K KA +L
Sbjct: 650 ALLQLCTHSPKFCNNV-IREGVIPPLVALTKSGTARGKEKAQNLL 693
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 158/274 (57%), Gaps = 9/274 (3%)
Query: 169 LLEKM-SSTLSDQKAAAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLRE 227
L+E++ SS+L Q+ A ELRLL K + R + ++ G LL + S DS +E
Sbjct: 546 LVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNS--GAIVLLVELLYST--DSATQE 601
Query: 228 DVITTLLNISIHDSNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKEL 287
+ +T LLN+SI+D+NKK +A+ + PL+ L G+ E + N+AA +F+LS ++ NK
Sbjct: 602 NAVTALLNLSINDNNKKAIADAGAIEPLI-HVLENGSSEAKENSAATLFSLSVIEENKIK 660
Query: 288 IGKSDALKPLIELLEEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIH 347
IG+S A+ PL++LL G P KD ++A+F++ + EN+A V+ GAVR ++ +
Sbjct: 661 IGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAG 720
Query: 348 -VAESLAILALLSTHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRS 406
V +++A+LA L+T +G+ G +P L+ ++ G R KEN A L + +
Sbjct: 721 MVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELG-SARGKENAAAALLQLST-NSG 778
Query: 407 KLKEVRDEENSHRTISELARTGTSRAKRKATGIL 440
+ + +E + + L+++GT RA+ KA +L
Sbjct: 779 RFCNMVLQEGAVPPLVALSQSGTPRAREKAQALL 812
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 75 EFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVREM 134
+F CP+S E+M DPVIV+SGQTY++ FI++W++ G + CP+T Q L HT LIPN+ V+ +
Sbjct: 233 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKAL 292
Query: 135 IEQWSKKQG--LESPNTVPYINE 155
I W + L PN +NE
Sbjct: 293 IANWCETNDVKLPDPNKSTSLNE 315
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/274 (33%), Positives = 158/274 (57%), Gaps = 9/274 (3%)
Query: 169 LLEKM-SSTLSDQKAAAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLRE 227
L+E++ SS+L Q+ A ELRLL K + R + ++ G LL + S DS +E
Sbjct: 549 LVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNS--GAIVLLVELLYST--DSATQE 604
Query: 228 DVITTLLNISIHDSNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKEL 287
+ +T LLN+SI+D+NKK +A+ + PL+ L G+ E + N+AA +F+LS ++ NK
Sbjct: 605 NAVTALLNLSINDNNKKAIADAGAIEPLI-HVLENGSSEAKENSAATLFSLSVIEENKIK 663
Query: 288 IGKSDALKPLIELLEEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIH 347
IG+S A+ PL++LL G P KD ++A+F++ + EN+A V+ GAVR ++ +
Sbjct: 664 IGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAG 723
Query: 348 -VAESLAILALLSTHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRS 406
V +++A+LA L+T +G+ G +P L+ ++ G R KEN A L + +
Sbjct: 724 MVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELG-SARGKENAAAALLQLST-NSG 781
Query: 407 KLKEVRDEENSHRTISELARTGTSRAKRKATGIL 440
+ + +E + + L+++GT RA+ KA +L
Sbjct: 782 RFCNMVLQEGAVPPLVALSQSGTPRAREKAQALL 815
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 75 EFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVREM 134
+F CP+S E+M DPVIV+SGQTY++ FI++W++ G + CP+T Q L HT LIPN+ V+ +
Sbjct: 236 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKAL 295
Query: 135 IEQWSKKQG--LESPNTVPYINE 155
I W + L PN +NE
Sbjct: 296 IANWCETNDVKLPDPNKSTSLNE 318
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/345 (30%), Positives = 181/345 (52%), Gaps = 22/345 (6%)
Query: 74 DEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVRE 133
D+ +CPIS E+M DPV++ SG TYDR I KW +GN TCP+T + L T+L+ N V++
Sbjct: 280 DDLRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQ 339
Query: 134 MIEQWSKKQGL----ESPNTVPYINEEAIKEAD--SDHFLCLLEKMSSTLSDQKAAAKEL 187
+I+ +SK+ G+ + V A +EA + FL E + + A E+
Sbjct: 340 VIQSYSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLA-GELIKGDEEEMVKALVEI 398
Query: 188 RLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHDSNK-KPV 246
R+LTK YR+ E G+ + L I S+ D ++E+ + ++N+S + K + V
Sbjct: 399 RILTKTSTFYRSCL--VEAGVVESLMKILRSD--DPRIQENAMAGIMNLSKDIAGKTRIV 454
Query: 247 AETPMVIPLLMKALRTGT-IETRSNAAAAIFTLSALDSNKELIGK-SDALKPLIELLE-- 302
E + L+++ L G E+R AAAA+F LS+L LIG+ SDA+ L+ +++
Sbjct: 455 GEDGGGLRLIVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSC 514
Query: 303 EGHPLTMKDVSSAIFSICLIH-ENRARAVKDGAVRVILTKVKNR----IHVAESLAILAL 357
+ ++ AI S+ + +N R + G V V+L VK+ A+S+AILA
Sbjct: 515 DYGDSAKRNALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAK 574
Query: 358 LSTHHTAVQDMGELGAVPSLLSIMREG-LCERSKENCVAILQAIC 401
++ + + + G + + I+ + +K++CVA+L +C
Sbjct: 575 MAEYPDGMISVLRRGGLKLAVKILGSSEVSPATKQHCVALLLNLC 619
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/347 (29%), Positives = 182/347 (52%), Gaps = 16/347 (4%)
Query: 72 FPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHT-LLIPNHL 130
P++F+CPIS E+M DPVI+ SG T+DR IQ+W+++GN+TCP T L+ T LIPNH
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 131 VREMIEQWSKKQGLESPNTVPYINEEAIKEADSDHFLCLLEKMSSTLSDQKAAAKELRLL 190
+R +I ++ ES P +E L+ + SS S ++ + +RL
Sbjct: 65 LRSLILNFAHVSLKESSR--PRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLT 122
Query: 191 TKKHPCYRALFADTEDG-IPQLLKPICESNSLDSDLREDVITTLLNISIHDSNKKPVAET 249
+ R + TE G + L + +S + L+E ++ LLN+S+ D NK +
Sbjct: 123 KRDSSIRRKV---TESGAVRAALDCV---DSCNQVLQEKSLSLLLNLSLEDDNKVGLVAD 176
Query: 250 PMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKS-DALKPLIELLEEGHPLT 308
VI ++ LR G+ + ++ AA + +L+ ++ NK IG DA+ L+ LL G+
Sbjct: 177 G-VIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRE 235
Query: 309 MKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAESLAILALLSTHHTAVQDM 368
K+ ++A++++C +NR R V G+V +++ + + A + +L LL ++M
Sbjct: 236 RKESATALYALCSFPDNRKRVVDCGSVPILVEAADSGLERA--VEVLGLLVKCRGGREEM 293
Query: 369 GEL-GAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDE 414
++ G V L++++R G + + + IL +C + EV+ E
Sbjct: 294 SKVSGFVEVLVNVLRNGNL-KGIQYSLFILNCLCCCSGEIVDEVKRE 339
>AT3G01400.1 | Symbols: | ARM repeat superfamily protein |
chr3:151920-152987 FORWARD LENGTH=355
Length = 355
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 97/290 (33%), Positives = 160/290 (55%), Gaps = 10/290 (3%)
Query: 164 DHFLCLLEKMSSTLSDQKAAAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDS 223
+H + L+ S ++ +QK AA E+RLL+K P R A I L+ I S D
Sbjct: 65 NHLVSHLDS-SYSIDEQKQAAMEIRLLSKNKPENRIKIAKA-GAIKPLISLISSS---DL 119
Query: 224 DLREDVITTLLNISIHDSNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDS 283
L+E +T +LN+S+ D NK+ +A + + PL+ +AL+ GT + NAA A+ LS ++
Sbjct: 120 QLQEYGVTAILNLSLCDENKESIASSGAIKPLV-RALKMGTPTAKENAACALLRLSQIEE 178
Query: 284 NKELIGKSDALKPLIELLEEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVR--VILTK 341
NK IG+S A+ L+ LLE G KD S+A++S+C EN+ RAV+ G ++ V L
Sbjct: 179 NKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMA 238
Query: 342 VKNRIHVAESLAILALLSTHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAIC 401
V +S +++LL + + + E G VP L+ I+ G +R KE V+IL +C
Sbjct: 239 DFGSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVG-TQRQKEMAVSILLQLC 297
Query: 402 LYDRSKLKEVRDEENSHRTISELARTGTSRAKRKATGILDRLNKIVNITH 451
+ + + E + + L++ GTSRAK+KA +++ L + +I++
Sbjct: 298 -EESVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLRQPRSISN 346
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 194/395 (49%), Gaps = 35/395 (8%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
+ P F+CPIS +LM DPV +++GQTYDR I W+ GN TCP T L+ LIPNH
Sbjct: 12 IQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNH 71
Query: 130 LVREMIEQW---SKKQGLESPNTVPYINEEAIKEADSDHFLCLLEKMSS------TLSDQ 180
+R +I++W ++ G+E +P + AD LL + S+ ++ +
Sbjct: 72 TLRRLIQEWCVANRSNGVER---IPTPKQ----PADPISVRSLLSQASAITGTHVSVRSR 124
Query: 181 KAAAKELRLLTKKHPCYRALFA--DTEDGIPQLLKPICESNSLDSDLREDVITTLLNISI 238
AA + LR L + R L A + + + ++L E+ SL S+L + + L+ + +
Sbjct: 125 AAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSSELVSESLALLVLLHM 184
Query: 239 HDSNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAI-FTLSALDSN--KELIGKSDAL- 294
++ + VA P + + + L +IE R NAAA I L+ S K +I SD++
Sbjct: 185 TETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISGSDSIF 244
Query: 295 KPLIELLEEGHPLT----MKDVSSAIFSICLIHENRARAVKDGAVRVILTKVK---NRIH 347
+ +++LL+ +P++ +K AIF++CL+ + R A+ GA +++ ++ +R
Sbjct: 245 EGVLDLLK--NPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCD 302
Query: 348 VAESLAILALLSTHHTAVQDMGELG-AVPSLL-SIMREGLCERSKENCVAILQAICLYDR 405
LA + LL GE VP ++ +I+R + +R+ E L A+C +
Sbjct: 303 TERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILR--VSDRATEYAAGALLALCTAEE 360
Query: 406 SKLKEVRDEENSHRTISELARTGTSRAKRKATGIL 440
E + + + T RAKRKA +L
Sbjct: 361 RCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLL 395
>AT5G58680.1 | Symbols: | ARM repeat superfamily protein |
chr5:23708247-23709320 REVERSE LENGTH=357
Length = 357
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 130/230 (56%), Gaps = 8/230 (3%)
Query: 174 SSTLSDQKAAAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTL 233
SS++ +QK AA E+RLL+K P R A I L+ I S D L+E +T +
Sbjct: 72 SSSIEEQKQAAMEIRLLSKNKPENRIKLAKA-GAIKPLVSLISSS---DLQLQEYGVTAV 127
Query: 234 LNISIHDSNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDA 293
LN+S+ D NK+ + + V PL+ ALR GT T+ NAA A+ LS ++ NK IG+S A
Sbjct: 128 LNLSLCDENKEMIVSSGAVKPLV-NALRLGTPTTKENAACALLRLSQVEENKITIGRSGA 186
Query: 294 LKPLIELLEEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKN--RIHVAES 351
+ L+ LLE G KD S+A++S+C +EN+ RAV+ G ++ ++ + + V +S
Sbjct: 187 IPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMIDFESDMVDKS 246
Query: 352 LAILALLSTHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAIC 401
++ LL + + + E G VP L+ I+ G +R KE V+IL +C
Sbjct: 247 AFVMNLLMSAPESKPAVVEEGGVPVLVEIVEAG-TQRQKEISVSILLQLC 295
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 170/353 (48%), Gaps = 37/353 (10%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQ-TCPQTNQVLAHTLLIPNHLV 131
P F+CPIS ELM+DPV V +GQTYDR I+ W++ GN TCP T L+ LIPNH +
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHTL 74
Query: 132 REMIEQW---SKKQGLESPNTVPYINEEAIKEADSDHFLCLLEKMSS------TLSDQKA 182
R +I++W ++ G+E +P + AD LL + S+ ++ + A
Sbjct: 75 RRLIQEWCVANRSNGVER---IPTPKQ----PADPTSVRALLSQASAITGTHVSVRSRAA 127
Query: 183 AAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHDSN 242
A + LR + R L A ++L I S + S+L + + L+ + I + N
Sbjct: 128 ALRRLRGFARDSDKNRVLIA--AHNATEILIKILFSETTSSELVSESLALLVMLPITEPN 185
Query: 243 K-KPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIG----KSDALKPL 297
+ ++ P + L + L +IETR NAAA I +S + +L G + +
Sbjct: 186 QFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSISNSESVFEGV 245
Query: 298 IELLEEGHPLT----MKDVSSAIFSICLIHENRARAVKDGAVRVILTKVK---NRIHVAE 350
++LL +P++ +K +F++C + R A+ GA +++ ++ +R
Sbjct: 246 LDLLR--NPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTER 303
Query: 351 SLAILALLSTHHTAVQDMGELG-AVPSLL-SIMREGLCERSKENCVAILQAIC 401
+LA + LL GE VP L+ +I+R + +R+ E L A+C
Sbjct: 304 ALATVELLCRTPEGCAAFGEHALTVPLLVKTILR--VSDRATEYAAGALLALC 354
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 165/322 (51%), Gaps = 22/322 (6%)
Query: 137 QWSKKQGLESPNTVPY------INEEAIKEAD------SDHFLCLLEKMSSTLSDQK-AA 183
+ S K+ LES N V + E ++ + D + H + L+E + S + K AA
Sbjct: 397 EMSPKKNLESSNNVNHEHSAAKTYECSVHDLDDSGTMTTSHTIKLVEDLKSGSNKVKTAA 456
Query: 184 AKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHDSNK 243
A E+R LT R I LL + L +E +T LLN+SI + NK
Sbjct: 457 AAEIRHLTINSIENRVHIGRC-GAITPLLSLLYSEEKLT---QEHAVTALLNLSISELNK 512
Query: 244 KPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSD-ALKPLIELLE 302
+ E + PL+ L TG + N+AA++F+LS L N+E IG+S+ A++ L+ LL
Sbjct: 513 AMIVEVGAIEPLV-HVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLG 571
Query: 303 EGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIH-VAESLAILALLSTH 361
+G KD +SA+F++ + H+N+AR V+ AV+ ++ + + V +++A+LA LS
Sbjct: 572 KGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAV 631
Query: 362 HTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENSHRTI 421
Q + G +P L+ + G +R KEN ++L +CL + K + +E + +
Sbjct: 632 GEGRQAIVREGGIPLLVETVDLG-SQRGKENAASVLLQLCL-NSPKFCTLVLQEGAIPPL 689
Query: 422 SELARTGTSRAKRKATGILDRL 443
L+++GT RAK KA +L
Sbjct: 690 VALSQSGTQRAKEKAQQLLSHF 711
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 50/71 (70%)
Query: 68 KTVVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIP 127
K + P F+CP+S ELM DPVIVASGQT+DR I+KWL+ G CP+T QVL H LIP
Sbjct: 198 KGISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIP 257
Query: 128 NHLVREMIEQW 138
N+ V+ MI W
Sbjct: 258 NYTVKAMIASW 268
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 99/322 (30%), Positives = 165/322 (51%), Gaps = 22/322 (6%)
Query: 137 QWSKKQGLESPNTVPY------INEEAIKEAD------SDHFLCLLEKMSSTLSDQK-AA 183
+ S K+ LES N V + E ++ + D + H + L+E + S + K AA
Sbjct: 433 EMSPKKNLESSNNVNHEHSAAKTYECSVHDLDDSGTMTTSHTIKLVEDLKSGSNKVKTAA 492
Query: 184 AKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHDSNK 243
A E+R LT R I LL + L +E +T LLN+SI + NK
Sbjct: 493 AAEIRHLTINSIENRVHIGRC-GAITPLLSLLYSEEKLT---QEHAVTALLNLSISELNK 548
Query: 244 KPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSD-ALKPLIELLE 302
+ E + PL+ L TG + N+AA++F+LS L N+E IG+S+ A++ L+ LL
Sbjct: 549 AMIVEVGAIEPLV-HVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNAAIQALVNLLG 607
Query: 303 EGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIH-VAESLAILALLSTH 361
+G KD +SA+F++ + H+N+AR V+ AV+ ++ + + V +++A+LA LS
Sbjct: 608 KGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKAVALLANLSAV 667
Query: 362 HTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENSHRTI 421
Q + G +P L+ + G +R KEN ++L +CL + K + +E + +
Sbjct: 668 GEGRQAIVREGGIPLLVETVDLG-SQRGKENAASVLLQLCL-NSPKFCTLVLQEGAIPPL 725
Query: 422 SELARTGTSRAKRKATGILDRL 443
L+++GT RAK KA +L
Sbjct: 726 VALSQSGTQRAKEKAQQLLSHF 747
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 50/71 (70%)
Query: 68 KTVVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIP 127
K + P F+CP+S ELM DPVIVASGQT+DR I+KWL+ G CP+T QVL H LIP
Sbjct: 234 KGISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIP 293
Query: 128 NHLVREMIEQW 138
N+ V+ MI W
Sbjct: 294 NYTVKAMIASW 304
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/434 (24%), Positives = 190/434 (43%), Gaps = 74/434 (17%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P+E +CPIS +LM DPVI+ASGQTY+R I+KW + G+ +CP+T Q L H L PN+ V+
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 133 EMIEQWSKKQGLESPNTVPY---INEEAIKEADSDH---------FLCL--------LEK 172
+I W ++ G+ P P +N + +DS+ LC LE+
Sbjct: 336 GLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEE 395
Query: 173 MSSTLSDQKAAAK---------ELRLLTKKHPCYRALFA--DTEDGIPQLLKPICESNSL 221
S+ S+++ K E+ +L Y+ + A D E+ + + K + L
Sbjct: 396 SSTIESERQQKEKNNAPDEVDSEINVLEG----YQDILAIVDKEEDLAKKCKVVENVRIL 451
Query: 222 DSDLRE-----------DVITTLLNISIHDSN--------------------KKPVAETP 250
D E + L ++HD+N K + T
Sbjct: 452 LKDNEEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTS 511
Query: 251 MVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELLEEGHPLTMK 310
VIPLL K + +++ A A LS L+ K +IG S A+ + LL + K
Sbjct: 512 GVIPLLEKMISCS--QSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLLQDTKTQCK 569
Query: 311 -DVSSAIFSICLIHENRARAVKDGAVRV--ILTKVKNRIHVAESLAILALLSTHHTAVQD 367
D A++++ N + ++ +L N + + +SLA+L L++ ++
Sbjct: 570 LDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEE 629
Query: 368 M-GELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENSHRTISELAR 426
M G + +L +++ G +E V+ L +C S ++ V +E ++ ++
Sbjct: 630 MITTQGMISTLATVLDTGDTVE-QEQAVSCLVILCTGSESCIQMVL-QEGVIPSLVSISV 687
Query: 427 TGTSRAKRKATGIL 440
G+ R + K+ +L
Sbjct: 688 NGSPRGRDKSQKLL 701
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 174/356 (48%), Gaps = 41/356 (11%)
Query: 74 DEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVRE 133
++ CPIS E+M DPV++ +G TYDR I KW +GN TCP T ++L T L+ N VR+
Sbjct: 290 EDLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQ 349
Query: 134 MIEQWSKKQGL----------ESPNTVPYINEEAIKEADSDHFLCLLEKMSSTLSDQKA- 182
+I + K G+ + VP E++ + + + ++S L +
Sbjct: 350 VIRKHCKTNGIVLAGISRRRKSHDDVVP----ESLAAKGAGKLIA--KFLTSELINGGEE 403
Query: 183 ----AAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISI 238
A +E+R+ TK R+ P LLK + +S+D ++E+ + +LN+S
Sbjct: 404 MIYRAVREIRVQTKTSSFNRSCLVKAGAVTP-LLKLL---SSVDIRIQENAMAGILNLSK 459
Query: 239 HDSNKKPVAETPMVIPLLMKALRTGT-IETRSNAAAAIFTLSALDSNKELIGKS-DALKP 296
H + K +A + I L++ L G ETR +A+A+F LS+++ LIG++ DA+
Sbjct: 460 HVTGKSKIAGEGLKI--LVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPG 517
Query: 297 LIELL--EEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVK----NRIHVAE 350
L+ ++ ++ + A+ + + +N R + GAV ++L ++ + A+
Sbjct: 518 LMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTAD 577
Query: 351 SLAILALLSTHHTAVQDMGELGAVPSLLSIMREGLCERS----KENCVAILQAICL 402
LA LA L+ + + G + + I+ E S K++CV ++ +CL
Sbjct: 578 CLATLAKLAEYPDGTIGVIRRGGLKLAVKILSS--SEDSPVAVKQHCVGLILNLCL 631
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 132/287 (45%), Gaps = 62/287 (21%)
Query: 71 VFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHL 130
V P+E +CPIS +LM DPVI+ASGQTY+R I+KW + G+ TCP+T+Q L+H L PN+
Sbjct: 278 VPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYC 337
Query: 131 VREMIEQWSKKQGLESPNTVP--------------------------------------- 151
V+ +I W ++ G++ P+ P
Sbjct: 338 VKALISSWCEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKDVKVVPL 397
Query: 152 ----YINEEAIKEADSDHFLCLLEKMS---STLSDQKAAAKELRLLTKKHPCYRALFADT 204
I EEA + + + L+E+ + +TL+D K+ R++ + R L D
Sbjct: 398 EESGTIKEEACESEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQ----IRVLLKDD 453
Query: 205 EDG---------IPQLLKPICES-NSLDSDLREDVITTLLNISIHDSNKKPVAETPMVIP 254
E+ + LL+ + + N ++ ++ L N+++ ++ K + +IP
Sbjct: 454 EEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIP 513
Query: 255 LLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELL 301
LL + L + + A LS L+ K +IG S A+ ++ LL
Sbjct: 514 LLEEML--CNPHSHGSVTAIYLNLSCLEEAKPVIGSSLAVPFMVNLL 558
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 49/69 (71%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
+ P +F+CPIS ELMKDPVI+ASG TYDR I+KW +G QTCP TN VL IPNH
Sbjct: 31 ITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNH 90
Query: 130 LVREMIEQW 138
+R MI+ W
Sbjct: 91 TIRRMIQGW 99
>AT5G40140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:16057347-16058999 FORWARD
LENGTH=550
Length = 550
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 119/218 (54%), Gaps = 3/218 (1%)
Query: 228 DVITTLLNISIHDSNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKEL 287
+V L+N+S+ SNK + + +V PL+ L+ G++E + ++A IF+L+ D NK
Sbjct: 289 NVTAVLVNLSLEKSNKVKIVRSGIVPPLI-DVLKCGSVEAQEHSAGVIFSLALEDENKTA 347
Query: 288 IGKSDALKPLIELLEEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIH 347
IG L+PL+ L+ G LT D + A++ + L+ NR + VK GAV+++L V
Sbjct: 348 IGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQMLLGMVSLGQM 407
Query: 348 VAESLAILALLSTHHTAVQDMGELGAVPSLLSIMREG--LCERSKENCVAILQAICLYDR 405
+ L IL +++ + + + G V ++ ++R + E ++E+CVA+L +
Sbjct: 408 IGRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVAVLYGLSHDGG 467
Query: 406 SKLKEVRDEENSHRTISELARTGTSRAKRKATGILDRL 443
+ K + N+ + ++ R+G RAK+KA +L+ L
Sbjct: 468 LRFKGLAMAANAVEELVKVERSGRERAKQKARRVLEVL 505
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 55/74 (74%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
+ P EF+CPIS +LMKDPVI+++G TYDR I+ W+N+GN+TCP TN VL IPNH
Sbjct: 29 ITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNH 88
Query: 130 LVREMIEQWSKKQG 143
+R+MI+ W ++G
Sbjct: 89 TIRKMIQGWCVEKG 102
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 24/280 (8%)
Query: 72 FPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQ-TCPQTNQVLAHTLLIPNHL 130
P F CPIS E+MKDPVIV++G TYDR I+KWL AG + +CP T Q + L PNH
Sbjct: 12 IPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHT 71
Query: 131 VREMIEQW---SKKQGLES-PNTVPYINEEAIKEADSDHFLCLLEKMSSTLSDQKAAAKE 186
+R +I+ W + G+E P P I + I++ L+ +S+ +Q K
Sbjct: 72 LRRLIQSWCTLNASYGVERIPTPRPPICKSEIEK--------LIRDSASSHENQVKCLKR 123
Query: 187 LRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISIHDS---NK 243
LR + ++ + G+P+ L I ++S + L ++ + L ++ ++ N
Sbjct: 124 LRQIVSENATNKRCLEAA--GVPEFLANIVSNDSENGSLTDEALNLLYHLETSETVLKNL 181
Query: 244 KPVAETPMVIPLLMKALRTGTIETRSNAAAAIFT-LSALDSNKELIGKSDALKPLIELLE 302
+ ++ L K ++ G E+R A + L D + + K + ++++L+
Sbjct: 182 LNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKPEVFTEVVQILD 241
Query: 303 EGHPLTMKDVSSA---IFSICLIHENRARAVKDGAVRVIL 339
+ ++ K +A + +IC NR +AV+ G + VI+
Sbjct: 242 DR--ISQKATKAAMHILVNICPWGRNRHKAVEAGVISVII 279
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%)
Query: 71 VFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHL 130
V P+E +CPIS +LM DPVI+ASGQTY+R I+KW + G+ TCP+T Q L H L PN+
Sbjct: 271 VPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNC 330
Query: 131 VREMIEQWSKKQGLESPNTVP 151
V+ +I W ++ G + P+ P
Sbjct: 331 VKGLIASWCEQNGTQIPSGPP 351
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 56/81 (69%)
Query: 71 VFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHL 130
V P+E +CPIS +LM DPVI+ASGQTY+R I+KW + G+ TCP+T Q L H L PN+
Sbjct: 271 VPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNC 330
Query: 131 VREMIEQWSKKQGLESPNTVP 151
V+ +I W ++ G + P+ P
Sbjct: 331 VKGLIASWCEQNGTQIPSGPP 351
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 149/281 (53%), Gaps = 11/281 (3%)
Query: 167 LCLLEKMSSTLSDQKAAAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLR 226
LC+ SS+++ +++AA +LRLL K R L E G Q L P+ N D +
Sbjct: 187 LCIDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIG--ESGAIQALIPLLRCN--DPWTQ 242
Query: 227 EDVITTLLNISIHDSNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKE 286
E +T LLN+S+HD NK +A I L+ L+TGT ++ NAA A+ +L+ L+ NK
Sbjct: 243 EHAVTALLNLSLHDQNKAVIA-AGGAIKSLVWVLKTGTETSKQNAACALLSLALLEENKG 301
Query: 287 LIGKSDALKPLIELLEEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKV-KNR 345
IG A+ PL+ LL G KD + ++ +C + +N+ RAV GAV+ ++ V +
Sbjct: 302 SIGACGAIPPLVSLLLNGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEG 361
Query: 346 IHVAE-SLAILALLSTHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYD 404
+AE ++ +L+ L+ + + E G + +L+ + +G + KE + L +C D
Sbjct: 362 TGMAEKAMVVLSSLAAIDDGKEAIVEEGGIAALVEAIEDGSV-KGKEFAILTLLQLC-SD 419
Query: 405 RSKLKEVRDEENSHRTISELARTG--TSRAKRKATGILDRL 443
+ + + E + + L+++G + RAKRKA +L L
Sbjct: 420 SVRNRGLLVREGAIPPLVGLSQSGSVSVRAKRKAERLLGYL 460
>AT5G62560.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:25110073-25111752 FORWARD
LENGTH=559
Length = 559
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 114/220 (51%), Gaps = 6/220 (2%)
Query: 225 LREDVITTLLNISIHDSNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSN 284
++ + +++N+S+ NK + + V PLL+ L++GT E + + A A+F+L+ D N
Sbjct: 292 VQTNAAASVVNLSLEKQNKVKIVRSGFV-PLLIDVLKSGTTEAQEHVAGALFSLALEDEN 350
Query: 285 KELIGKSDALKPLIELLEEGHP-LTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVK 343
K +IG A++PL+ L +D + A++ + LI NR R V+ GAV +L+ V+
Sbjct: 351 KMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVR 410
Query: 344 NRIHVAESLAILALLSTHHTAVQDMGELGAVPSLLSIMRE---GLCERSKENCVAILQAI 400
+ + L +L L+ M + AV L+ +RE G E ++ENCVA+L +
Sbjct: 411 SGDSTSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLTL 470
Query: 401 CLYDRSKLKEVRDEENSHRTISELARTGTSRAKRKATGIL 440
C + + + E + + E+ G R K KA+ IL
Sbjct: 471 C-QGNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKIL 509
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 12/81 (14%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAG------NQTCPQTNQVLAHTLLI 126
P EF CPI+ LM DPV+V+SGQT++R +Q N G + T P + V I
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLSTV------I 85
Query: 127 PNHLVREMIEQWSKKQGLESP 147
PN ++ I W +Q ++ P
Sbjct: 86 PNLAMKSTIFSWCDRQKVDHP 106
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 156/354 (44%), Gaps = 67/354 (18%)
Query: 72 FPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLV 131
P F CPIS E M+DPV + +GQTY+R I KW N G+ TCP T Q L L+ PN +
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTL 119
Query: 132 REMIEQWSKKQGLESPNTVPYINEEAIKEADSDHFLCLLEKMSSTLSDQKAAAK-----E 186
++I W ++ + + AI ++ TL K AK E
Sbjct: 120 HQLIYTWFSQKYVLMKKRSEDVQGRAI-------------EILGTLRKAKGKAKVHALSE 166
Query: 187 LRLLTKKHPCYRALFADTEDG---IPQLLKPICESNSLDSDLREDVITTLLNISIHDSNK 243
L+ + H + D E G I LL P S+++ S + I L+N+ + DS+
Sbjct: 167 LKQVVMAHAIAKKTVVD-EGGVFVISSLLSPF-TSHAVGS----EAIAILVNLEL-DSDS 219
Query: 244 KPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELLEE 303
K P + L++ L G+IET+ N A LIG+ L+E E+
Sbjct: 220 KAGLMQPARVSLMVDMLNDGSIETKINCA-------------RLIGR------LVE--EK 258
Query: 304 GHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAESLAILALLSTHHT 363
G + VSS + L+ R VKD + R V+ +L +L +S H
Sbjct: 259 GFRAEL--VSSHSLLVGLM-----RLVKDR---------RRRNGVSPALTLLKSVSVHKQ 302
Query: 364 AVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENS 417
+ +GAVP L+ ++ L E+ + +L ++CL ++ ++D N+
Sbjct: 303 VRNLLVRIGAVPQLVDVL-PCLDVECLESALFVLDSLCLESEGRI-ALKDSVNT 354
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 84/161 (52%), Gaps = 24/161 (14%)
Query: 72 FPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQ-TCPQTNQVLAHTLLIPNHL 130
P F CPIS ++MKDPVIV++G TYDR I+KWL +G + +CP T QV+ T L PNH
Sbjct: 7 IPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHT 66
Query: 131 VREMIEQW---SKKQGLES-PNTVPYIN----EEAIKEADSDHFLCLLEKMSSTLSDQKA 182
+R +I+ W + G+E P P I E+ IKE+ S H +Q
Sbjct: 67 LRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHL------------NQVK 114
Query: 183 AAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDS 223
K LR + ++ + E +P+ L I SNS+D+
Sbjct: 115 CLKRLRQIVSENTTNKRCLEAAE--VPEFLANIV-SNSVDT 152
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
+ P F+CPIS ++MK PV + +G TYDR IQ+WL+ GN TCP T Q+L + IPN
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNR 67
Query: 130 LVREMIEQWS 139
++ +IE WS
Sbjct: 68 TLQRLIEIWS 77
>AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 |
chr5:26048173-26049843 REVERSE LENGTH=556
Length = 556
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 134/277 (48%), Gaps = 16/277 (5%)
Query: 174 SSTLSDQKAAAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTL 233
SS + DQ+ +R +T+ + R I LLK + S S ++ + + +L
Sbjct: 235 SSEIFDQEQGLIMMRKMTRTNDEARVSLCSPR--ILSLLKNMIVSRY--SLVQTNALASL 290
Query: 234 LNISIHDSNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDA 293
+N+S+ NK + V P+L+ L++G+ E + +AA IF+LS D NK IG A
Sbjct: 291 VNLSLDKKNKLTIVRLGFV-PILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGA 349
Query: 294 LKPLIELLEEGHP-LTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAESL 352
L+PL+ L T D + A++ + L NR++ V+ GAV + + V++ + +L
Sbjct: 350 LQPLLHALRAAESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGESASRAL 409
Query: 353 AILALLSTHHTAVQDMGELGAVPSLLSIMREGLCER---------SKENCVAILQAICLY 403
++ L+ M + AV L+ +RE E ++ENCVA L A+ +
Sbjct: 410 LVICNLACCSEGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFALS-H 468
Query: 404 DRSKLKEVRDEENSHRTISELARTGTSRAKRKATGIL 440
+ + K + E + + E+ GT RA+ KA IL
Sbjct: 469 ESLRFKGLAKEARAVEVLKEVEERGTERAREKAKKIL 505
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
+ P FKCPIS ++M+ PV + +G TYDR IQ+WL+ GN TCP T Q+L +PN
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNL 69
Query: 130 LVREMIEQWSKKQGLESPNTVPYINEEAIKEADS-DHFLCLLEKMSS 175
++ +I WS G P +N + +E + + LLE++ S
Sbjct: 70 TLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMS 116
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P FKCPIS ++MK PV +++G TYDR IQ+WL+ GN TCP T Q+L + +PN +
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLH 71
Query: 133 EMIEQWS----KKQGLESPNT 149
+I+ WS ++ ESP +
Sbjct: 72 RLIDHWSDSINRRADSESPES 92
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 150/354 (42%), Gaps = 67/354 (18%)
Query: 72 FPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLV 131
P F CPIS E M+DPV + +GQTY+R I KW N G+ TCP T Q L + PN +
Sbjct: 64 IPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTL 123
Query: 132 REMIEQWSKKQGLESPNTVPYINEEAIKEADSDHFLCLLEKMSSTLSDQKAAAK-----E 186
+I W ++ + + AI ++ TL K A+ E
Sbjct: 124 HHLIYTWFSQKYVLMKKRSEDVQGRAI-------------EILGTLKKAKGQARVHALSE 170
Query: 187 LRLLTKKHPCYRALFADTEDG---IPQLLKPICESNSLDSDLREDVITTLLNISIHDSNK 243
L+ + H R + E G I LL P S+++ S +V+ L+++ + DS+
Sbjct: 171 LKQIVIAHLMARKTVVE-EGGVSVISSLLGPF-TSHAVGS----EVVAILVSLDL-DSDS 223
Query: 244 KPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIELLEE 303
K P + L++ L G+ ET+ N A I + L+E E+
Sbjct: 224 KSGLMQPAKVSLIVDMLNDGSNETKINCARLI-------------------RGLVE--EK 262
Query: 304 GHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAESLAILALLSTHHT 363
G + VSS + L+ R VKD ++R V+ +L +L +S H
Sbjct: 263 GFRAEL--VSSHSLLVGLM-----RLVKDK---------RHRNGVSPALRLLKPISVHKQ 306
Query: 364 AVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVRDEENS 417
M +GAVP L+ I+ L E + +L A+C D V+D N+
Sbjct: 307 VRSLMVSIGAVPQLVDIL-PSLDPECLELALFVLDALC-TDVEGRVAVKDSANT 358
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P F CPIS+E+M++P + A G TY+ +++WL+ G++T P TN LAH L+PNH +R
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 133 EMIEQW 138
I++W
Sbjct: 558 SAIQEW 563
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 72 FPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLV 131
P++FKC +S+ +M DPVI++SG T++R IQKW + GN +CP + + L L PN +
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVEL 278
Query: 132 REMIEQWSKKQGLE 145
+ I +W K GL+
Sbjct: 279 KSQISEWCAKNGLD 292
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 43/65 (66%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P F CPI++E+MKDP A G TY+ I+KWL+ G+QT P TN L+H L+PN +R
Sbjct: 419 PSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRALR 478
Query: 133 EMIEQ 137
IE+
Sbjct: 479 SAIEE 483
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 48/69 (69%)
Query: 74 DEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVRE 133
++FKCPIS E+M+DP + A G TY+ +KWL +G +T P+TN+ L + L+PNH +R
Sbjct: 235 EDFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRI 294
Query: 134 MIEQWSKKQ 142
+I+ W +K
Sbjct: 295 IIKDWLEKN 303
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 41/66 (62%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P F CPIS E+MKDP + A G TY+ I WL G++T P TN L HT L+PN +R
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 133 EMIEQW 138
I++W
Sbjct: 386 SAIQEW 391
>AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 |
chr3:17644434-17645963 FORWARD LENGTH=509
Length = 509
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 119/226 (52%), Gaps = 9/226 (3%)
Query: 225 LREDVITTLLNISIHDSNKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSN 284
++ + +++N+S+ NK + + V PLL+ L++G+ E + + A+F+L+ + N
Sbjct: 241 VQTNAAASIVNLSLEKPNKLKIVRSGFV-PLLIDVLKSGSTEAQEHVIGALFSLAVEEEN 299
Query: 285 KELIGKSDALKPLIELLEEGHP-LTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVK 343
K +IG A++PL+ L +D + A++ + LI NR+R VK GAV ++L+ ++
Sbjct: 300 KMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIR 359
Query: 344 NRIHVAESLAILALLSTHHTAVQDMGELGAVPSLLSIMRE-GLCER---SKENCVAILQA 399
+ + L +L L+ M + AV L+ +RE G E ++ENCV L
Sbjct: 360 SGESASRILLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDAAARENCVGALLT 419
Query: 400 ICLYDRSKLKEVRDEENSHRTISEL--ARTGTSRAKRKATGILDRL 443
+ + + + + + E + ++E+ + +G+ R K KA+ IL L
Sbjct: 420 LSVGNM-RFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQTL 464
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAG------NQTCPQTNQVLAHTLLI 126
P EF CPI+ LM DPV+VASGQT++R +Q N + T P + V I
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLSTV------I 64
Query: 127 PNHLVREMIEQWSKKQGLESPNTVPYINEEAI 158
PN ++ I W + +E P Y E +
Sbjct: 65 PNLAMKSTILSWCDRNKMEHPRPPDYAYVEGV 96
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P F CPI +E+MK+P + A G +Y+ IQ+WL+ G+ T P TN L + +L PNH +R
Sbjct: 716 PSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTLR 775
Query: 133 EMIEQWSKKQGLES 146
+I+ W K+ ++
Sbjct: 776 SLIQDWHSKRAAQA 789
>AT2G45910.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:18894520-18898212 FORWARD
LENGTH=834
Length = 834
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 71 VFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHL 130
+ P F CPI +E+M+DP + A G TY+ I+ WL++ + T P TN L+HT LI NH
Sbjct: 762 IAPPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHA 821
Query: 131 VREMIEQW 138
+R I++W
Sbjct: 822 LRSAIQEW 829
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P + CPI KE+M+DP I A G TY+R I++W+ P T L H+ L PNH +R
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 133 EMIEQWSKKQGLESPNTV 150
I +W + L+ T+
Sbjct: 769 SAIREWRSRSRLDLSTTL 786
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P F CPI+ ++M+DP + A G TY+ I +W G++T P N+ L HT L+PN +R
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 133 EMIEQW 138
I++W
Sbjct: 414 SAIQEW 419
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Query: 72 FPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLA-HTLLIPNHL 130
P+ F CPIS E+MKDPV SG TYDR I KWL +CP T Q L + L PNH+
Sbjct: 24 IPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEK-VPSCPVTKQPLPLDSDLTPNHM 82
Query: 131 VREMIEQW 138
+R +I+ W
Sbjct: 83 LRRLIQHW 90
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=415
Length = 415
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 16/69 (23%)
Query: 70 VVFPDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNH 129
+ P +F+CPIS ELMKDP W +G QTCP TN VL IPNH
Sbjct: 31 ITIPSQFQCPISYELMKDP----------------WFESGYQTCPVTNTVLTSLEQIPNH 74
Query: 130 LVREMIEQW 138
+R MI+ W
Sbjct: 75 TIRRMIQGW 83
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P + CPI +E+MKDP+I A G TY+ I++WL G+ T P TN + LIPNH +
Sbjct: 726 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 785
Query: 133 EMIEQWSKK 141
I+ W +
Sbjct: 786 LAIQDWQNQ 794
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 41/69 (59%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P + CPI +E+MKDP+I A G TY+ I++WL G+ T P TN + LIPNH +
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 133 EMIEQWSKK 141
I+ W +
Sbjct: 796 LAIQDWQNQ 804
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P F CPISK++M++P + A G TY+ ++WLN G + P TN L + LIPN ++R
Sbjct: 295 PQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLIPNLVLR 354
Query: 133 EMIEQW 138
I+ W
Sbjct: 355 SAIKDW 360
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P F CP+ K++MK+P I A G TYDR I++W+ ++T P TN L + L+PNH +
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHTLY 808
Query: 133 EMIEQWSKK 141
I +W +
Sbjct: 809 AAIVEWRNR 817
>AT1G08315.1 | Symbols: | ARM repeat superfamily protein |
chr1:2620500-2621477 REVERSE LENGTH=325
Length = 325
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 97/183 (53%), Gaps = 15/183 (8%)
Query: 169 LLEKMSSTLSDQKAAA-KELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLRE 227
++ ++SS +AAA ELRL++K+ P R + AD IP L + + S+ +E
Sbjct: 12 IVSRLSSVSEQTRAAALAELRLISKQDPDSRLIIADA-GAIPYLAETLYSSSHSS---QE 67
Query: 228 DVITTLLNISIHDSNKKPVAETPMVIPLLMKALR-----TGTIETRSNAAAAIFTLSALD 282
+ TLLN+SI ++++P+ + ++ L ALR T +S+AA L A +
Sbjct: 68 NAAATLLNLSI--TSREPLMSSRGLLDALSHALRHHDTTTSPAAVQSSAATIYSLLIAEE 125
Query: 283 SNKELIG-KSDALKPLIELLE--EGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVIL 339
S + +IG K D + LI ++ + HP ++KD A+F+I L NR+ + GA+ +
Sbjct: 126 SYRPIIGSKRDIIFSLIHIIRYPDSHPRSIKDSLKALFAIALYPMNRSTMISLGAIPALF 185
Query: 340 TKV 342
+ +
Sbjct: 186 SLI 188
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P + CPI +E+M++P I A G TY+R I WL N P T Q L H L PNH +R
Sbjct: 726 PSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHN-ISPVTRQKLDHFKLTPNHTLR 784
Query: 133 EMIEQWSKK 141
I W +
Sbjct: 785 SAIRDWKSR 793
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 74 DEFKCPISKELMKDPVIVASGQTYDRPFIQKWL-----NAGNQTCPQTNQVLAHTLLIPN 128
+ F CP++K++M +PV + +GQT++R I+KW N +CP T++ L+ T L P+
Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS 86
Query: 129 HLVREMIEQWSKK 141
+R IE+W +
Sbjct: 87 IALRNTIEEWRAR 99
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 74 DEFKCPISKELMKDPVIVASGQTYDRPFIQKWL-----NAGNQTCPQTNQVLAHTLLIPN 128
+ F CP++K++M +PV + +GQT++R I+KW N +CP T++ L+ T L P+
Sbjct: 27 EAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPS 86
Query: 129 HLVREMIEQWSKK 141
+R IE+W +
Sbjct: 87 IALRNTIEEWRAR 99
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P F CP+ K++M +P + A G TYDR I++WL N T P T+ L L+PN+ +
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHN-TSPMTDSPLHSKNLLPNYTLY 825
Query: 133 EMIEQW 138
I +W
Sbjct: 826 TAIMEW 831
>AT1G56030.1 | Symbols: | RING/U-box superfamily protein |
chr1:20957098-20958550 REVERSE LENGTH=371
Length = 371
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 83 ELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVREMIEQ 137
++MK+P + A G TY+ IQKW+N G++T P TN L+H PN +R IE+
Sbjct: 314 DVMKNPHMAADGFTYELEAIQKWINTGHRTSPMTNLKLSHFSFFPNRALRSAIEE 368
>AT5G61560.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=796
Length = 796
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P F CPI+K++M++P + + G TY++ I++WL N P T+ L+PNH +
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSLLPNHSLL 784
Query: 133 EMIEQW 138
I++W
Sbjct: 785 SAIKEW 790
>AT5G61550.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751805 FORWARD
LENGTH=860
Length = 860
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P F CP+ K +M +P + A G TYDR I++WL + T P TN L + LI N+ +
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQKD-TSPVTNLPLPNKNLIANYTLY 834
Query: 133 EMIEQWSKKQGLESP 147
I +W + L P
Sbjct: 835 SAIMEWKSNKRLNFP 849
>AT5G61560.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=794
Length = 794
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P F CPI+K++M++P + + G TY++ I++WL N P T+ L+PNH +
Sbjct: 724 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSLLPNHSLL 782
Query: 133 EMIEQW 138
I++W
Sbjct: 783 SAIKEW 788
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Query: 74 DEFKCPISKELMKDPVIVASGQTYDRPFIQKWL----NAGN-QTCPQTNQVLAHTLLIPN 128
+ F CP++KE+M DPV + +G+T++R I+KW ++G +CP T+Q L T + +
Sbjct: 25 EAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSAS 84
Query: 129 HLVREMIEQWSKK 141
+R IE+W +
Sbjct: 85 IALRNTIEEWRSR 97
>AT5G61550.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751558 FORWARD
LENGTH=845
Length = 845
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 73 PDEFKCPISKELMKDPVIVASGQTYDRPFIQKWLNAGNQTCPQTNQVLAHTLLIPNHLVR 132
P F CP+ K +M +P + A G TYDR I++WL + T P TN L + LI N+ +
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQKD-TSPVTNLPLPNKNLIANYTLY 834
Query: 133 EMIEQW 138
I +W
Sbjct: 835 SAIMEW 840
>AT3G03440.1 | Symbols: | ARM repeat superfamily protein |
chr3:815709-818568 FORWARD LENGTH=408
Length = 408
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 20/268 (7%)
Query: 183 AAKELRLLTK-KHPCYRALFADTEDGIPQLLKPICESNSLDS--DLREDVITTLLNISIH 239
AAKE+R LTK H C R Q ++P+ DS E + LLN+++
Sbjct: 84 AAKEIRRLTKTSHRCRRHF--------SQAVEPLVSMLRFDSPESHHEAALLALLNLAVK 135
Query: 240 DS-NKKPVAETPMVIPLLMKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLI 298
D NK + E + P++ L++ + + A+A++ TLSA +NK +IG + + L+
Sbjct: 136 DEKNKVSIIEAGALEPII-NFLQSNSPTLQEYASASLLTLSASANNKPIIGANGVVPLLV 194
Query: 299 ELLEEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAE------SL 352
++++ G P D A+ ++ + +N + + + IL +K+ ++ SL
Sbjct: 195 KVIKHGSPQAKADAVMALSNLSTLPDNLSMILATKPLSPILNLLKSSKKSSKTSEKCCSL 254
Query: 353 AILALLSTHHTAVQDMGELGAVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEVR 412
++S + + G V +++ ++ G + ++E+ V +L +C DRSK +E
Sbjct: 255 IEALMVSGEEARTGLVSDEGGVLAVVEVLENGSLQ-AREHAVGVLLTLCQSDRSKYREPI 313
Query: 413 DEENSHRTISELARTGTSRAKRKATGIL 440
E + EL GTS+++ KA +L
Sbjct: 314 LREGVIPGLLELTVQGTSKSRIKAQRLL 341
>AT4G31890.2 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 18/270 (6%)
Query: 183 AAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISI-HDS 241
AA E+RLL K+ R A IP L+ I +S +D+ + + LLN+ I +D+
Sbjct: 163 AASEVRLLAKEDSEARVTLA-MLGAIPPLVSMIDDSRIVDAQIAS--LYALLNLGIGNDA 219
Query: 242 NKKPVAETPMVIPLL--MKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIE 299
NK + + V +L +++ T E A LSALDSNK +IG S A+ L++
Sbjct: 220 NKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVK 279
Query: 300 LL----EEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAESLAIL 355
L E +D A++++ + N + ++ + +L + + + V+E IL
Sbjct: 280 TLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGD-MEVSER--IL 336
Query: 356 ALLSTHHTAVQDMGELG----AVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEV 411
A+LS + +G A P L+ ++ +E IL + + ++V
Sbjct: 337 AILSNLVAVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILMLMA-HKGYGDRQV 395
Query: 412 RDEENSHRTISELARTGTSRAKRKATGILD 441
E + EL G++ A+++A+ IL+
Sbjct: 396 MIEAGIESALLELTLLGSALAQKRASRILE 425
>AT4G31890.1 | Symbols: | ARM repeat superfamily protein |
chr4:15427290-15429049 REVERSE LENGTH=518
Length = 518
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 124/270 (45%), Gaps = 18/270 (6%)
Query: 183 AAKELRLLTKKHPCYRALFADTEDGIPQLLKPICESNSLDSDLREDVITTLLNISI-HDS 241
AA E+RLL K+ R A IP L+ I +S +D+ + + LLN+ I +D+
Sbjct: 163 AASEVRLLAKEDSEARVTLA-MLGAIPPLVSMIDDSRIVDAQIAS--LYALLNLGIGNDA 219
Query: 242 NKKPVAETPMVIPLL--MKALRTGTIETRSNAAAAIFTLSALDSNKELIGKSDALKPLIE 299
NK + + V +L +++ T E A LSALDSNK +IG S A+ L++
Sbjct: 220 NKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVK 279
Query: 300 LL----EEGHPLTMKDVSSAIFSICLIHENRARAVKDGAVRVILTKVKNRIHVAESLAIL 355
L E +D A++++ + N + ++ + +L + + + V+E IL
Sbjct: 280 TLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGD-MEVSER--IL 336
Query: 356 ALLSTHHTAVQDMGELG----AVPSLLSIMREGLCERSKENCVAILQAICLYDRSKLKEV 411
A+LS + +G A P L+ ++ +E IL + + ++V
Sbjct: 337 AILSNLVAVPEGRKAIGLVCDAFPVLVDVLNWTDSPGCQEKATYILMLMA-HKGYGDRQV 395
Query: 412 RDEENSHRTISELARTGTSRAKRKATGILD 441
E + EL G++ A+++A+ IL+
Sbjct: 396 MIEAGIESALLELTLLGSALAQKRASRILE 425