Miyakogusa Predicted Gene

Lj1g3v3580540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3580540.1 Non Chatacterized Hit- tr|D8RJ88|D8RJ88_SELML
Putative uncharacterized protein OS=Selaginella
moelle,30.73,0.00000000003,Tetrahydrobiopterin biosynthesis
enzymes-like,NULL; GTP_cyclohydroI,GTP cyclohydrolase I/Nitrile
oxi,CUFF.30896.1
         (325 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07270.1 | Symbols:  | GTP cyclohydrolase I | chr3:2315451-23...   382   e-106
AT3G07270.2 | Symbols:  | GTP cyclohydrolase I | chr3:2314005-23...   377   e-105

>AT3G07270.1 | Symbols:  | GTP cyclohydrolase I |
           chr3:2315451-2317059 FORWARD LENGTH=466
          Length = 466

 Score =  382 bits (981), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 196/319 (61%), Positives = 249/319 (78%), Gaps = 5/319 (1%)

Query: 1   MGCLDDGSFTVKLENGATNGFAELSVEEEGNNATIEDAVKVLLLGLGEDINREGLRKTPL 60
           MG LD+G   ++L+ G  NG  EL+ E +     I+DAVK+LL GL ED+NREG++KTP 
Sbjct: 1   MGALDEGCLNLELDIGMKNGCIELAFEHQPETLAIQDAVKLLLQGLHEDVNREGIKKTPF 60

Query: 61  RVAKALREGTRGYKLKVKDIVQGALFPEAGLDNSVGHAGGAGGLVIVRDLDLFSYCESCL 120
           RVAKALREGTRGYK KVKD VQ ALFPEAGLD  VG AGG GGLV+VRDLD +SYCESCL
Sbjct: 61  RVAKALREGTRGYKQKVKDYVQSALFPEAGLDEGVGQAGGVGGLVVVRDLDHYSYCESCL 120

Query: 121 LPFQVKCHVGYVPSGGRVVGLSKLSRVAEVFAKRLQEPQRLADEVCSALHLGIKPAGVAI 180
           LPF VKCH+GYVPSG RV+GLSK SRV +VFAKRLQ+PQRLAD++CSAL   +KPAGVA+
Sbjct: 121 LPFHVKCHIGYVPSGQRVLGLSKFSRVTDVFAKRLQDPQRLADDICSALQHWVKPAGVAV 180

Query: 181 ILQCTHIHFPDIESAFLD-SNYQGWVKILVSSGSGVFENKNTDVWADFFSLLKFRGINVE 239
           +L+C+HIHFP ++   L+ S+++G+VK+LVSSGSGVFE++++++W +F S L F+G+  +
Sbjct: 181 VLECSHIHFPSLDLDSLNLSSHRGFVKLLVSSGSGVFEDESSNLWGEFQSFLMFKGVKTQ 240

Query: 240 NFHFRGPSDPCWCPSESSLSAKSKIQP-ANPVMVSAIASIIKYLGEDPLRKELTGTPRRF 298
                G S   WCP   S+ + SK+ P  +P MVSA+ SI+K LGEDPLRKEL  TP RF
Sbjct: 241 ALCRNGSSVKEWCP---SVKSSSKLSPEVDPEMVSAVVSILKSLGEDPLRKELIATPTRF 297

Query: 299 VKWLMNFQNSNLDMKLNGF 317
           +KW++NFQ +NL+MKLN F
Sbjct: 298 LKWMLNFQRTNLEMKLNSF 316


>AT3G07270.2 | Symbols:  | GTP cyclohydrolase I |
           chr3:2314005-2317059 FORWARD LENGTH=466
          Length = 466

 Score =  377 bits (968), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 194/319 (60%), Positives = 247/319 (77%), Gaps = 5/319 (1%)

Query: 1   MGCLDDGSFTVKLENGATNGFAELSVEEEGNNATIEDAVKVLLLGLGEDINREGLRKTPL 60
           M   D+G   ++L+ G  NG  EL+ E +     I+DAVK+LL GL ED+NREG++KTP 
Sbjct: 1   MDTKDEGCLNLELDIGMKNGCIELAFEHQPETLAIQDAVKLLLQGLHEDVNREGIKKTPF 60

Query: 61  RVAKALREGTRGYKLKVKDIVQGALFPEAGLDNSVGHAGGAGGLVIVRDLDLFSYCESCL 120
           RVAKALREGTRGYK KVKD VQ ALFPEAGLD  VG AGG GGLV+VRDLD +SYCESCL
Sbjct: 61  RVAKALREGTRGYKQKVKDYVQSALFPEAGLDEGVGQAGGVGGLVVVRDLDHYSYCESCL 120

Query: 121 LPFQVKCHVGYVPSGGRVVGLSKLSRVAEVFAKRLQEPQRLADEVCSALHLGIKPAGVAI 180
           LPF VKCH+GYVPSG RV+GLSK SRV +VFAKRLQ+PQRLAD++CSAL   +KPAGVA+
Sbjct: 121 LPFHVKCHIGYVPSGQRVLGLSKFSRVTDVFAKRLQDPQRLADDICSALQHWVKPAGVAV 180

Query: 181 ILQCTHIHFPDIESAFLD-SNYQGWVKILVSSGSGVFENKNTDVWADFFSLLKFRGINVE 239
           +L+C+HIHFP ++   L+ S+++G+VK+LVSSGSGVFE++++++W +F S L F+G+  +
Sbjct: 181 VLECSHIHFPSLDLDSLNLSSHRGFVKLLVSSGSGVFEDESSNLWGEFQSFLMFKGVKTQ 240

Query: 240 NFHFRGPSDPCWCPSESSLSAKSKIQP-ANPVMVSAIASIIKYLGEDPLRKELTGTPRRF 298
                G S   WCP   S+ + SK+ P  +P MVSA+ SI+K LGEDPLRKEL  TP RF
Sbjct: 241 ALCRNGSSVKEWCP---SVKSSSKLSPEVDPEMVSAVVSILKSLGEDPLRKELIATPTRF 297

Query: 299 VKWLMNFQNSNLDMKLNGF 317
           +KW++NFQ +NL+MKLN F
Sbjct: 298 LKWMLNFQRTNLEMKLNSF 316