Miyakogusa Predicted Gene

Lj1g3v3580310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3580310.1 Non Chatacterized Hit- tr|I1KZ45|I1KZ45_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,34.32,8e-19,FBD,FBD;
seg,NULL,gene.Ljchr1_pseudomol_20120830.path1.gene7910.1
         (279 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G56820.1 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    57   1e-08

>AT5G56820.1 | Symbols:  | F-box/RNI-like/FBD-like
           domains-containing protein | chr5:22976334-22977838
           FORWARD LENGTH=435
          Length = 435

 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 81/177 (45%), Gaps = 9/177 (5%)

Query: 71  VKPLSNLVRADVSFSMVKMQNVVDLFPIDEFLRLEEFSDPVFPNLIHMELTSGGKPLQWK 130
           V+ + NLV A V  +  + +N++      E L+  + +D +F  L+++EL    K L   
Sbjct: 250 VEDMPNLVEAHVEANQHETKNLLRFLTSVERLKDPDLTDRIFHQLLYLEL-HLHKRLNGD 308

Query: 131 SVLNFLHHSPQLQMFVLRGLIAASFEDW-----LTPPRVPECFSSKLRTCFLTKFTGKKS 185
            +L+ L HSP LQ   L      S +D        P  VPEC +  L T     + G+  
Sbjct: 309 RILSLLKHSPNLQTLKLNEKPLRSIKDQPNISVRKPNSVPECLTFHLETLEWQGYAGRPE 368

Query: 186 EMGFSKFVLQNSTLLGNMTIFCFYRVSR---DEKKMAEIRIELDSCPWSSATWFFLL 239
           +   + ++L N+  L   TI  ++  SR    +KK  +I  EL S   +S +   +L
Sbjct: 369 DKEIAVYILGNALRLNTATISRYFSSSRFRHHQKKDLKIVEELKSITKASTSCQLVL 425