Miyakogusa Predicted Gene

Lj1g3v3557090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3557090.1 Non Chatacterized Hit- tr|D8REC9|D8REC9_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.54,2e-18,seg,NULL; Trypsin-like serine proteases,Peptidase
cysteine/serine, trypsin-like,CUFF.30861.1
         (552 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07210.1 | Symbols:  | unknown protein; Has 97 Blast hits to ...   550   e-156

>AT3G07210.1 | Symbols:  | unknown protein; Has 97 Blast hits to 85
           proteins in 31 species: Archae - 0; Bacteria - 14;
           Metazoa - 7; Fungi - 19; Plants - 37; Viruses - 0; Other
           Eukaryotes - 20 (source: NCBI BLink). |
           chr3:2293000-2295119 REVERSE LENGTH=547
          Length = 547

 Score =  550 bits (1416), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 337/574 (58%), Positives = 395/574 (68%), Gaps = 49/574 (8%)

Query: 1   MGGLRETWCFCRGVSKSERMKGAICSGKGQAMATITSTAANGV-SGTGFLIHRNLLLTTH 59
           MG + ++WCFC+GV KSE+MKG+I +GK  AMA I+ +  NGV SGTGFLIHRNLLLTTH
Sbjct: 1   MGVILDSWCFCKGVGKSEKMKGSIFTGKAPAMARISVSGPNGVTSGTGFLIHRNLLLTTH 60

Query: 60  ANLPSVVTAGSAEIRLHNGVAATLVPQRFFITSSVLDLTIVGLDDVDGESNAQGQS---P 116
            NLPS+    +AE+RL NGVAA L P RFFITSSV+DLTIVGLD VDG+S++Q Q    P
Sbjct: 61  LNLPSISATETAEVRLQNGVAAALFPHRFFITSSVIDLTIVGLDLVDGDSSSQSQLQQQP 120

Query: 117 HYLKTCCRTNLDLGSVVYLLGYTEKQELTVGEGKVVIATDNLIKLSTDGIHWSPGSAGFD 176
           HYLKTC + NLDLGSVVYLLGY  + EL +GEGK+V+ATDNLIKLSTD + WSPGSAGFD
Sbjct: 121 HYLKTCSKPNLDLGSVVYLLGYANQNELKIGEGKLVVATDNLIKLSTDEMIWSPGSAGFD 180

Query: 177 VHGNLAFMICDPMKLATSPNTKXXXXXXXXXXXWKKDLPMQFGIPIPVICDWLNQHWEGN 236
           V GNLAFMICDP KL+TSP +              K L MQFGIPIPVICDWLNQHWEG+
Sbjct: 181 VQGNLAFMICDPRKLSTSPTSTSSSSSSSLKKDNNKTLMMQFGIPIPVICDWLNQHWEGS 240

Query: 237 LDE-LNKPKLPLIRLMSNTPKSEHSCASFTQRQVFKSTEADNEGTTSSSSNNVAKTRDQG 295
           LDE   KPKLPLIRLMS+  KSE SC SFT R+VFK  ++ + GT SSS+     TRDQ 
Sbjct: 241 LDEHTTKPKLPLIRLMSSGQKSERSCTSFTMRRVFKPNDSADVGTPSSSN-----TRDQT 295

Query: 296 --PSCAAVTNIVEEESLINNPNAA----HVQGIPTPEIYESPRVTSVPLRRKENTQIPLL 349
              S  A     EEE+   NP       H QGIPTPEIYESP++TS PL R E  Q+ LL
Sbjct: 296 HPSSSIAAEEEKEEETSKTNPQVCGTTTHAQGIPTPEIYESPKLTSGPL-RNETAQVHLL 354

Query: 350 DINFPPKIAKPAVFPQSSKAPHPESAENFAKEPLPNNQLQREQNQDRRLGTHTAEVSSTG 409
           DINFPP+I K   F       HPE     +   +   ++  E +         A+++STG
Sbjct: 355 DINFPPRIPKAITF-------HPELNSLQSNHIVEEAEIVSEGSD--------AQIASTG 399

Query: 410 SVNGALSEVQSSSSPKDALEMHN--GYSSEGETMYSAETAESRNY-TSPRELKF--QQVG 464
           SVNGALSEV SSS P  A  ++N  GYSSE ETMYSAETAESRNY T PR+ +F  ++VG
Sbjct: 400 SVNGALSEVISSSPPAAAHYVYNNHGYSSEEETMYSAETAESRNYPTPPRKSEFHHERVG 459

Query: 465 RSQSCVSYNRWGATQRSQVARGMTVETQRSFMRVKKMYSQGATSQRSNNDFLSPTVSSIM 524
           RSQSCVS +RWG  Q+S   R   +E QRSF+  KKM+SQGA SQRS ND+ SPTVSSIM
Sbjct: 460 RSQSCVSSSRWGTPQKSLNGRREMLEKQRSFVHGKKMHSQGAMSQRS-NDYYSPTVSSIM 518

Query: 525 KR--NSSEH----PIPNRSRQTVLHSSPSPRWMF 552
           K+  NSSE     P+P R R      S SPRW F
Sbjct: 519 KKRINSSEQQIIKPVP-RPRAV----SSSPRWAF 547