Miyakogusa Predicted Gene
- Lj1g3v3556950.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3556950.1 Non Chatacterized Hit- tr|Q9ZPZ9|Q9ZPZ9_ARATH
Putative uncharacterized protein At2g06030 OS=Arabidop,32.54,1e-17,GB
DEF: HYPOTHETICAL PROTEIN AT2G06040,NULL; F-BOX/LEUCINE RICH REPEAT
PROTEIN,NULL; RNI-like,NULL; ,CUFF.30852.1
(450 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G06040.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-ri... 274 1e-73
AT5G21900.1 | Symbols: | RNI-like superfamily protein | chr5:72... 172 3e-43
AT5G23340.1 | Symbols: | RNI-like superfamily protein | chr5:78... 73 4e-13
AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein | c... 70 4e-12
AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1... 69 6e-12
AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 | chr1:17276... 64 3e-10
AT5G01720.1 | Symbols: | RNI-like superfamily protein | chr5:26... 61 1e-09
AT3G58530.1 | Symbols: | RNI-like superfamily protein | chr3:21... 59 5e-09
AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 | chr... 57 3e-08
AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protei... 54 2e-07
AT1G55590.1 | Symbols: | RNI-like superfamily protein | chr1:20... 54 2e-07
AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein | ch... 53 3e-07
AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily pr... 53 3e-07
AT5G27920.1 | Symbols: | F-box family protein | chr5:9942063-99... 52 1e-06
AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting prote... 51 2e-06
AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 | chr3:18572... 50 3e-06
AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 | chr4:41978... 49 6e-06
>AT2G06040.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Leucine-rich
repeat, cysteine-containing subtype
(InterPro:IPR006553); BEST Arabidopsis thaliana protein
match is: RNI-like superfamily protein
(TAIR:AT5G21900.1); Has 5028 Blast hits to 2547 proteins
in 240 species: Archae - 0; Bacteria - 125; Metazoa -
2326; Fungi - 765; Plants - 1373; Viruses - 0; Other
Eukaryotes - 439 (source: NCBI BLink). |
chr2:2352333-2355419 REVERSE LENGTH=762
Length = 762
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 172/443 (38%), Positives = 251/443 (56%), Gaps = 35/443 (7%)
Query: 6 PFSQALKRVQDRRDSVS-----WTPTKKEGGVAIAIAR----LVP---SSLQELAMTKFA 53
PFS A+K ++DR + + K+ I + R P SLQEL++
Sbjct: 324 PFSTAMKIIKDREEYTTPHVGIGVSNKERSSPTIWVPRSNFSFPPRKAPSLQELSLRVLV 383
Query: 54 SDISEIATTSGSMEGVVKYIEDQTFSIRDLPHHLLDTLIDQLWGETDPVKIEFLRVLVTG 113
+ I + + Y+ D L + QL ++ + + FL +LV G
Sbjct: 384 KNADAITS--------LDYVPDT-----------LRVKLCQLLCDSRRMDLHFLDLLVQG 424
Query: 114 SPKEIRVVNGFWLTESQI-ECFQNCDTAELRVLQMEFCDSCMIESAIPAVLAK--KQLPQ 170
SP EI V + WLTE + ECF+NCDT+ L VLQ++ C CM + +P LA+ K LP
Sbjct: 425 SPTEICVPDCSWLTEEEFTECFKNCDTSNLMVLQLDQCGRCMPDYILPFTLARSPKVLPM 484
Query: 171 LNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCRSTLKELYLD 230
L+ LS+ G+ L D GL+ ++ S + SINL+ C LTS + ML+ S L+ELY++
Sbjct: 485 LSTLSISGACRLSDVGLRQLVSSAPAITSINLNQCSLLTSSSIDMLSDSLGSVLRELYIN 544
Query: 231 ECSKLTGKDILSSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGLNLKGLSLRDCRFLTD 290
EC + K IL++LK E LEVLS+A + SV F+ ++ ARG LK L L + R L+D
Sbjct: 545 ECQNIDMKHILAALKKFEKLEVLSLADLPSVKGRFLKEFVTARGQTLKQLILTNSRKLSD 604
Query: 291 VSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEGNPISDEVIAAFLEV 350
S+K ISE+CP L LD+ N+ KL+D S +L N CQA+ L NP SDE +AAF+E
Sbjct: 605 SSIKVISENCPNLSVLDLANVCKLTDSSLGYLANGCQALEKLIFCRNPFSDEAVAAFVET 664
Query: 351 KGSCLLELSLDSMEKVGQHTTLSLA-NCTKLHTLNLPRCVNMRDLELGFIVDKCRALRSL 409
G L ELSL++++KVG +T L+LA + KL L++ C M + LG+IVD +L+ L
Sbjct: 665 AGGSLKELSLNNVKKVGHNTALALAKHSDKLQILDISWCREMSNDLLGYIVDNSSSLKVL 724
Query: 410 TIHHCCKVTRDFIDGHSNPHLEI 432
+ C +VT F+ GHSNP+++I
Sbjct: 725 KVFGCSQVTDVFVKGHSNPNVKI 747
>AT5G21900.1 | Symbols: | RNI-like superfamily protein |
chr5:7238239-7240338 FORWARD LENGTH=544
Length = 544
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 213/439 (48%), Gaps = 34/439 (7%)
Query: 2 DSQTPFSQALKRVQDRRDSVSWTPTKKEGGVAIAIARLVPSSLQELAMTKFASDISEIAT 61
+ ++ F +A + ++ RR +S T + + + + R PS L EL+ A + I
Sbjct: 108 EDKSEFRKAKESIKKRRQEIS---TTSDMEIDLNVRRKAPS-LVELSARVLAQNFLAIK- 162
Query: 62 TSGSMEGVVKYIEDQTFSIRDLPHHL---LDTLIDQLWGETDPVKIEFLRVLVTGSPKEI 118
S++ +P HL L L+ L GE D + +L+ SP EI
Sbjct: 163 -----------------SLKLVPDHLRKKLSYLVSGL-GEFDT---RLMELLIEDSPSEI 201
Query: 119 RVVNGFWLTESQ-IECFQNCDTAELRVLQMEFCDSCMIESAIPAVL--AKKQLPQLNILS 175
N L E ++ F +CD L+VL ++ C M + I A P L LS
Sbjct: 202 CAKNCVQLVEDDLVKIFCDCDRVSLKVLILDLCGRSMTDYTINQFFKRAPNGFPSLTTLS 261
Query: 176 LRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCRSTLKELYLDECSKL 235
L+G+ L D L LI S L+ INL+ C LT + +L STL+ L + C +
Sbjct: 262 LQGAFCLTDNALLLISKSSPLLQYINLTECSLLTYRALRILADKFGSTLRGLSIGGCQGI 321
Query: 236 TG-KDILSSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGLNLKGLSLRDCRFLTDVSVK 294
K SSL E L LS+AG+ SV+D + + + R L LSL +C +TD +
Sbjct: 322 KKHKGFSSSLYKFEKLNYLSVAGLVSVNDGVVRSFFMFRSSILTDLSLANCNEVTDECMW 381
Query: 295 AISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEGNPISDEVIAAFLEVKGSC 354
I +C +L LDI +L KL+D S EF+T C+ +++LKL N SDE IAAFLEV G
Sbjct: 382 HIGRYCKKLEALDITDLDKLTDKSLEFITEGCRYLKSLKLTSNRFSDECIAAFLEVSGGS 441
Query: 355 LLELSLDSMEKVGQHTTLSLAN-CTKLHTLNLPRCVNMRDLELGFIVDKCRALRSLTIHH 413
L EL L+ + VG T SLA C L L+L C +++ +L I+ C +L+SL +
Sbjct: 442 LRELCLNKVRDVGPETAFSLAKVCKMLQFLDLSWCRRLKEDDLRRILRCCSSLQSLKLFG 501
Query: 414 CCKVTRDFIDGHSNPHLEI 432
+V +++ S + I
Sbjct: 502 WTQVEDTYLEELSRSDVHI 520
>AT5G23340.1 | Symbols: | RNI-like superfamily protein |
chr5:7856314-7857983 FORWARD LENGTH=405
Length = 405
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 140/311 (45%), Gaps = 33/311 (10%)
Query: 142 LRVLQMEFCDSCMIESAIPAVLAKKQLPQLNILSLRGSAYLEDQGLKLILGSCQKLESIN 201
LRVL + C + ++ + ++ + L L L + L D+GL + C L +++
Sbjct: 100 LRVLNLHNCKG-ITDTGLASI--GRCLSLLQFLDVSYCRKLSDKGLSAVAEGCHDLRALH 156
Query: 202 LSICPQLTSEGVAMLTGPCRSTLKELYLDECSKLTGKDILSSLKNLECLEVLSIAGIGSV 261
L+ C +T E + L+ CR L+ L L C+ +T + +K ++ L I +V
Sbjct: 157 LAGCRFITDESLKSLSERCRD-LEALGLQGCTNITDSGLADLVKGCRKIKSLDINKCSNV 215
Query: 262 DDDFIMDYTVARGLNLKGLSLRDCRFLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEF 321
D + A +LK L L DC + + S+ ++++ C L TL IG +SD S
Sbjct: 216 GDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDESIML 275
Query: 322 LTNSCQ-AMRTLKLEGN-PISDEVIAAFLE-------VKGSCLLELSLDSMEKVGQHTTL 372
L +SC+ +++ L+++ ISD ++ L+ + C E++ + +G L
Sbjct: 276 LADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFRDLGSDDVL 335
Query: 373 SLANCTKLHTLNLPRCVNMRDLELGFIVDKCRALRSLTIHHCCKVTRDFIDGHSNPHL-E 431
L L + C + +G ++DKC +L ++ID S PH+ E
Sbjct: 336 G------LKVLKVSNCTKITVTGIGKLLDKCSSL-------------EYIDVRSLPHVTE 376
Query: 432 INWTDPDDQVP 442
+ ++ + P
Sbjct: 377 VRCSEAGLEFP 387
>AT4G15475.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8845927-8848701 FORWARD LENGTH=610
Length = 610
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 45/291 (15%)
Query: 166 KQLPQLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCRSTLK 225
++ L L L+G Y+ DQGL + C++LE +NL C LT GV L C +LK
Sbjct: 163 QKCTSLKSLDLQG-CYVGDQGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLK 221
Query: 226 ELYLDECSKLTGKDILSSLKNLECLEVLSIAGIGSVDDDFIMD---YTVARGLN-LKGLS 281
+ + +K+T + + + + LEVL + D ++I D VA+G + LK L
Sbjct: 222 SIGVAASAKITDLSLEAVGSHCKLLEVLYL------DSEYIHDKGLIAVAQGCHRLKNLK 275
Query: 282 LRDCRFLTDVSVKAISEHCPRLHTLDIGNL--------------------IKLSDLSF-- 319
L+ C +TDV+ A+ E C L L + + + LSD F
Sbjct: 276 LQ-CVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVS 334
Query: 320 ----EFLTNSCQAMRTLKLEG-NPISDEVIAAFLEVKGSC--LLELSLDSMEKVGQHTTL 372
E + + C+ + +++ G + I I A + SC L EL+L +++G
Sbjct: 335 CKGLEAIAHGCKELERVEINGCHNIGTRGIEA---IGKSCPRLKELALLYCQRIGNSALQ 391
Query: 373 SLA-NCTKLHTLNLPRCVNMRDLELGFIVDKCRALRSLTIHHCCKVTRDFI 422
+ C L L+L C + D+ + I CR L+ L I C ++ I
Sbjct: 392 EIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGI 442
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 3/169 (1%)
Query: 166 KQLPQLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCRSTLK 225
K P+L L+L + + L+ I C+ LE ++L C + + + CR+ LK
Sbjct: 369 KSCPRLKELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIGDIAMCSIAKGCRN-LK 427
Query: 226 ELYLDECSKLTGKDILSSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGLNLKGLSLRDC 285
+L++ C ++ K I+S K+ + L LS+ V + ++ + +G +L+ L++ C
Sbjct: 428 KLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALI--AIGKGCSLQQLNVSGC 485
Query: 286 RFLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKL 334
++D + AI+ CP+L LDI L + D+ L C ++ L L
Sbjct: 486 NQISDAGITAIARGCPQLTHLDISVLQNIGDMPLAELGEGCPMLKDLVL 534
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 118/257 (45%), Gaps = 9/257 (3%)
Query: 179 SAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCRSTLKELYLDECSKLTGK 238
S+ L D GL + ++E+++L CP ++S G+ L C ++LK L L C G
Sbjct: 124 SSSLTDTGLTALANGFPRIENLSLIWCPNVSSVGLCSLAQKC-TSLKSLDLQGC--YVGD 180
Query: 239 DILSSL-KNLECLEVLSIAGIGSVDDDFIMDYTVARGLNLKGLSLRDCRFLTDVSVKAIS 297
L+++ K + LE L++ + D ++D V +LK + + +TD+S++A+
Sbjct: 181 QGLAAVGKFCKQLEELNLRFCEGLTDVGVIDLVVGCSKSLKSIGVAASAKITDLSLEAVG 240
Query: 298 EHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEGNPISDEVIAAFLEVKGSCLLE 357
HC L L + + + D + C ++ LKL+ ++D AA E+ S L
Sbjct: 241 SHCKLLEVLYLDSEY-IHDKGLIAVAQGCHRLKNLKLQCVSVTDVAFAAVGELCTS-LER 298
Query: 358 LSLDSMEKVGQHTTLSLANCT-KLHTLNLPRCVNMRDLELGFIVDKCRALRSLTIHHCCK 416
L+L S + ++ + KL L L C + L I C+ L + I+ C
Sbjct: 299 LALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHN 358
Query: 417 VTRDFID--GHSNPHLE 431
+ I+ G S P L+
Sbjct: 359 IGTRGIEAIGKSCPRLK 375
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 97/250 (38%), Gaps = 62/250 (24%)
Query: 166 KQLPQLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCRSTLK 225
K +L L+L ++ +GL+ I C++LE + ++ C + + G+ + C LK
Sbjct: 317 KGSKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSC-PRLK 375
Query: 226 ELYLDECSKLTG---KDILSSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGL-NLKGLS 281
EL L C ++ ++I K+LE L ++ +GIG D M ++A+G NLK L
Sbjct: 376 ELALLYCQRIGNSALQEIGKGCKSLEILHLVDCSGIG----DIAM-CSIAKGCRNLKKLH 430
Query: 282 LRDCRFLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEGNPISD 341
+R C + + + +I +HC
Sbjct: 431 IRRCYEIGNKGIISIGKHCKS--------------------------------------- 451
Query: 342 EVIAAFLEVKGSCLLELSLDSMEKVGQHTTLSLANCTKLHTLNLPRCVNMRDLELGFIVD 401
L ELSL +KVG +++ L LN+ C + D + I
Sbjct: 452 -------------LTELSLRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISDAGITAIAR 498
Query: 402 KCRALRSLTI 411
C L L I
Sbjct: 499 GCPQLTHLDI 508
>AT2G25490.1 | Symbols: EBF1, FBL6 | EIN3-binding F box protein 1 |
chr2:10848018-10850275 REVERSE LENGTH=628
Length = 628
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 124/282 (43%), Gaps = 37/282 (13%)
Query: 166 KQLPQLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCRSTLK 225
+ P L LSL + + D GL I C +LE + L+ C +T +G+ + C L
Sbjct: 174 RSCPSLGSLSLWNVSTITDNGLLEIAEGCAQLEKLELNRCSTITDKGLVAIAKSC-PNLT 232
Query: 226 ELYLDECSKLTGKDILSSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGLNLKGLSLRDC 285
EL L+ CS++ + +L+ ++ L+ +SI V D I +L L L+
Sbjct: 233 ELTLEACSRIGDEGLLAIARSCSKLKSVSIKNCPLVRDQGIASLLSNTTCSLAKLKLQML 292
Query: 286 RFLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTN-------------SCQAMRTL 332
+TDVS+ + + + L + L +S+ F + N +CQ + +
Sbjct: 293 N-VTDVSLAVVGHYGLSITDLVLAGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDM 351
Query: 333 KLE----GNP------------ISDEVIAAFLEVKGSCLLE-LSLDSMEKVGQHTTL-SL 374
LE G P +SD + +F K S LE L L+ +V Q SL
Sbjct: 352 GLESVGKGCPNMKKAIISKSPLLSDNGLVSF--AKASLSLESLQLEECHRVTQFGFFGSL 409
Query: 375 ANCT-KLHTLNLPRCVNMRDLELGFIVDK-CRALRSLTIHHC 414
NC KL +L C+++RDL G C ALRSL+I +C
Sbjct: 410 LNCGEKLKAFSLVNCLSIRDLTTGLPASSHCSALRSLSIRNC 451
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 106/225 (47%), Gaps = 6/225 (2%)
Query: 168 LPQLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCRSTLKEL 227
L +LN L++ + D GL+ + C ++ +S P L+ G+ S L+ L
Sbjct: 334 LQKLNSLTITACQGVTDMGLESVGKGCPNMKKAIISKSPLLSDNGLVSFAKASLS-LESL 392
Query: 228 YLDECSKLTGKDILSSLKNL-ECLEVLSIAGIGSVDDDFIMDYTVARGLNLKGLSLRDCR 286
L+EC ++T SL N E L+ S+ S+ D + L+ LS+R+C
Sbjct: 393 QLEECHRVTQFGFFGSLLNCGEKLKAFSLVNCLSIRDLTTGLPASSHCSALRSLSIRNCP 452
Query: 287 FLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEG-NPISDEVIA 345
D ++ AI + CP+L +D+ L +++ F L S ++ + G + ++D VI+
Sbjct: 453 GFGDANLAAIGKLCPQLEDIDLCGLKGITESGFLHLIQS--SLVKINFSGCSNLTDRVIS 510
Query: 346 AFLEVKGSCLLELSLDSMEKVGQHTTLSL-ANCTKLHTLNLPRCV 389
A G L L++D + + +S+ ANC L L++ +C
Sbjct: 511 AITARNGWTLEVLNIDGCSNITDASLVSIAANCQILSDLDISKCA 555
>AT1G47056.1 | Symbols: VFB1 | VIER F-box proteine 1 |
chr1:17276103-17277659 REVERSE LENGTH=518
Length = 518
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 114/253 (45%), Gaps = 34/253 (13%)
Query: 178 GSAYLEDQGLKLILGSCQKLESINLS-------ICPQLTSEGVAM--LTGPCRSTLKELY 228
GS +G+K +L C LE +++ I P++ GVA L C LKELY
Sbjct: 164 GSCDFGAKGVKAVLDHCSNLEELSIKRLRGFTDIAPEMIGPGVAASSLKSIC---LKELY 220
Query: 229 LDECSKLTGKDILSSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGLNLKGLSLRDCRFL 288
+C ++ KNL+ L++ +G D D ++ + + + L + +
Sbjct: 221 NGQCFG----PVIVGAKNLKSLKLFRCSG----DWDLLLQEMSGKDHGVVEIHLERMQ-V 271
Query: 289 TDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEG---NPISDEVIA 345
+DV++ AIS +C L +L + + ++ + C+ +R L ++G N I DE +
Sbjct: 272 SDVALSAIS-YCSSLESLHLVKTPECTNFGLAAIAEKCKRLRKLHIDGWKANLIGDEGLV 330
Query: 346 AFLEVKGSCLLELSLDSMEKVGQHTTLSL----ANCTKLHTLNLPRCVNMRDLELGFIVD 401
A + S L EL L + TTLSL A C L L L C D EL I
Sbjct: 331 AVAKF-CSQLQELVLIGVNP----TTLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAA 385
Query: 402 KCRALRSLTIHHC 414
KC ALR L I +C
Sbjct: 386 KCPALRKLCIKNC 398
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 4/143 (2%)
Query: 194 CQKLESINLSICPQLTSEGVAMLTGPCRSTLKELYLDEC-SKLTGKDILSSLKNLECLEV 252
C LES++L P+ T+ G+A + C+ L++L++D + L G + L ++ C ++
Sbjct: 282 CSSLESLHLVKTPECTNFGLAAIAEKCK-RLRKLHIDGWKANLIGDEGLVAVAKF-CSQL 339
Query: 253 LSIAGIGSVDDDFIMDYTVARGLNLKGLSLRDCRFLTDVSVKAISEHCPRLHTLDIGNLI 312
+ IG + A+ LNL+ L+L C D + I+ CP L L I N
Sbjct: 340 QELVLIGVNPTTLSLGMLAAKCLNLERLALCGCDTFGDPELSCIAAKCPALRKLCIKN-C 398
Query: 313 KLSDLSFEFLTNSCQAMRTLKLE 335
+SD+ E L N C + +K++
Sbjct: 399 PISDVGIENLANGCPGLTKVKIK 421
>AT5G01720.1 | Symbols: | RNI-like superfamily protein |
chr5:267118-270391 REVERSE LENGTH=665
Length = 665
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 113/273 (41%), Gaps = 42/273 (15%)
Query: 178 GSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGV-AMLTGPCRSTLKELYLDECSKLT 236
G ++D LK + C+ L+ ++ S C LT G+ ++L+G L+ L L CS +
Sbjct: 235 GCFGVDDDSLKSLRHDCKSLKKLDASSCQNLTHRGLTSLLSGA--GYLQRLDLSHCSSVI 292
Query: 237 GKDILSSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGL--------------------- 275
D SSLK + L+ + + G D T+ L
Sbjct: 293 SLDFASSLKKVSALQSIRLDGCSVTPDGLKAIGTLCNSLKEVSLSKCVSVTDEGLSSLVM 352
Query: 276 ---NLKGLSLRDCRFLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTL 332
+L+ L + CR L+ VS+ I+ CP L +L + + +S +F + C+ + L
Sbjct: 353 KLKDLRKLDITCCRKLSRVSITQIANSCPLLVSLKMESCSLVSREAFWLIGQKCRLLEEL 412
Query: 333 KLEGNPISDE-------VIAAFLEVKGSCLLELSLDSMEKVGQHTTLSLANCTKLHTLNL 385
L N I DE ++ G C L ++ + +G C+ L L+L
Sbjct: 413 DLTDNEIDDEGLKSISSCLSLSSLKLGIC-LNITDKGLSYIGM-------GCSNLRELDL 464
Query: 386 PRCVNMRDLELGFIVDKCRALRSLTIHHCCKVT 418
R V + D+ + I C L ++ I +C +T
Sbjct: 465 YRSVGITDVGISTIAQGCIHLETINISYCQDIT 497
>AT3G58530.1 | Symbols: | RNI-like superfamily protein |
chr3:21645759-21648219 FORWARD LENGTH=353
Length = 353
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 114/263 (43%), Gaps = 35/263 (13%)
Query: 161 AVLAKKQLPQLNILSLRGSAYLEDQGLKLILGSCQ----KLESINLSICPQLTSEGVAML 216
A L+ + Q+ ++L + + D LKL+ C LE +NL++C +++ G+ +
Sbjct: 73 AALSLPRYRQVKHINLEFAQGVVDSHLKLVKTECPDALLSLEWLNLNVCQKISDNGIEAI 132
Query: 217 TGPCRSTLKELYLDECSKLTGKDILSSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGLN 276
T C L+V SI V D I + V +
Sbjct: 133 TSICPK---------------------------LKVFSIYWNVRVTDAGIRNL-VKNCRH 164
Query: 277 LKGLSLRDCRFLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEG 336
+ L+L C+ LTD S++ ++E P L +L+I +K++D + C +++TL L
Sbjct: 165 ITDLNLSGCKSLTDKSMQLVAESYPDLESLNITRCVKITDDGLLQVLQKCFSLQTLNLYA 224
Query: 337 NPISDEVIAAFLEVKGSCLLE-LSLDSMEKVGQHTTLSLANCTKLHTLNLPRCVNMRDLE 395
+S A++++ L L + + + +A C KL +LNL CV + D
Sbjct: 225 --LSGFTDKAYMKISLLADLRFLDICGAQNISDEGIGHIAKCNKLESLNLTWCVRITDAG 282
Query: 396 LGFIVDKCRALRSLTIHHCCKVT 418
+ I + C +L L++ VT
Sbjct: 283 VNTIANSCTSLEFLSLFGIVGVT 305
>AT5G25350.1 | Symbols: EBF2 | EIN3-binding F box protein 2 |
chr5:8794842-8796882 REVERSE LENGTH=623
Length = 623
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 17/217 (7%)
Query: 170 QLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCRSTLKELYL 229
L+ L++ + + ++GL+ I C L SI++ CP++ +GVA L S L ++ L
Sbjct: 220 NLSDLTIDSCSGVGNEGLRAIARRCVNLRSISIRSCPRIGDQGVAFLLAQAGSYLTKVKL 279
Query: 230 DECSKLTGKDILSSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGLN-LKGLSLRDCRFL 288
+ ++G + + L + G+ V++ A+GL LK LS+ CR +
Sbjct: 280 -QMLNVSGLSLAVIGHYGAAVTDLVLHGLQGVNEKGFWVMGNAKGLKKLKSLSVMSCRGM 338
Query: 289 TDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEG-NPISDEVIAAF 347
TDV ++A+ CP L + + + +S L S ++ +LKLE + I+ + F
Sbjct: 339 TDVGLEAVGNGCPDLKHVSLNKCLLVSGKGLVALAKSALSLESLKLEECHRINQFGLMGF 398
Query: 348 LEVKGSCLLELSLDSMEKVGQHTTLSLANCTKLHTLN 384
L GS L SLANC + N
Sbjct: 399 LMNCGSKL--------------KAFSLANCLGISDFN 421
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 105/224 (46%), Gaps = 6/224 (2%)
Query: 195 QKLESINLSICPQLTSEGVAMLTGPCRSTLKELYLDECSKLTGKDILSSLKNLECLEVLS 254
+KL+S+++ C +T G+ + C LK + L++C ++GK +++ K+ LE L
Sbjct: 325 KKLKSLSVMSCRGMTDVGLEAVGNGC-PDLKHVSLNKCLLVSGKGLVALAKSALSLESLK 383
Query: 255 IAGIGSVDDDFIMDYTVARGLNLKGLSLRDCRFLTDVSVKAISEHCPRL--HTLDIGNLI 312
+ ++ +M + + G LK SL +C ++D + ++ +L I
Sbjct: 384 LEECHRINQFGLMGFLMNCGSKLKAFSLANCLGISDFNSESSLPSPSCSSLRSLSIRCCP 443
Query: 313 KLSDLSFEFLTNSCQAMRTLKLEG-NPISDEVIAAFLEVKGSCLLELSLDSMEKVGQHTT 371
D S FL C ++ ++L G N ++D + L+ L++++L V +T
Sbjct: 444 GFGDASLAFLGKFCHQLQDVELCGLNGVTDAGVRELLQSNNVGLVKVNLSECINVSDNTV 503
Query: 372 LSLANC--TKLHTLNLPRCVNMRDLELGFIVDKCRALRSLTIHH 413
+++ C L +LNL C N+ + L + C ++ L I +
Sbjct: 504 SAISVCHGRTLESLNLDGCKNITNASLVAVAKNCYSVNDLDISN 547
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 11/140 (7%)
Query: 270 TVARGLNLKGLSLRDCRF---LTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSC 326
T +RG L L +R F +TDV + A++ CP L + + NL +SDL + SC
Sbjct: 134 TSSRG-GLGKLQIRGSGFESKVTDVGLGAVAHGCPSLRIVSLWNLPAVSDLGLSEIARSC 192
Query: 327 QAMRTLKLEGNP-ISDEVIAAFLEVKGSC--LLELSLDSMEKVGQHTTLSLA-NCTKLHT 382
+ L L P I+D + A E +C L +L++DS VG ++A C L +
Sbjct: 193 PMIEKLDLSRCPGITDSGLVAIAE---NCVNLSDLTIDSCSGVGNEGLRAIARRCVNLRS 249
Query: 383 LNLPRCVNMRDLELGFIVDK 402
+++ C + D + F++ +
Sbjct: 250 ISIRSCPRIGDQGVAFLLAQ 269
>AT1G21410.1 | Symbols: SKP2A | F-box/RNI-like superfamily protein |
chr1:7497479-7499386 FORWARD LENGTH=360
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Query: 271 VARGLNLKGLSLR-DCRFLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAM 329
V + + L+ L+LR D L D +V+AI+ HC L LD+ +K++D S L + C +
Sbjct: 86 VPKFVKLQTLNLRQDKPQLEDNAVEAIANHCHELQELDLSKSLKITDRSLYALAHGCPDL 145
Query: 330 RTLKLEG-NPISDEVIA------------------------AFLEVKGSC--LLELSLDS 362
L L G SD IA A + +C + L+L
Sbjct: 146 TKLNLSGCTSFSDTAIAYLTRFCRKLKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGW 205
Query: 363 MEKVGQHTTLSLA-NCTKLHTLNLPRCVNMRDLELGFIVDKCRALRSLTIHHCCKVT 418
E + +SLA C L TL+L CV + D + + D C LRSL +++C +T
Sbjct: 206 CENISDDGVMSLAYGCPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNIT 262
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 114/265 (43%), Gaps = 34/265 (12%)
Query: 156 ESAIPAVLAKKQLPQLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAM 215
++A+ A+ +L L L S + D+ L + C L +NLS C + +A
Sbjct: 106 DNAVEAI--ANHCHELQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAY 163
Query: 216 LTGPCRSTLKELYLDECSKLTGKDILSSL-KNLECLEVLSIAGIGSVDDDFIMDYTVARG 274
LT CR LK L L C K + L ++ N ++ L++ ++ DD +M ++A G
Sbjct: 164 LTRFCRK-LKVLNLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVM--SLAYG 220
Query: 275 L-NLKGLSLRDCRFLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLK 333
+L+ L L C +TD SV A+++ C L +L + ++D + L S
Sbjct: 221 CPDLRTLDLCGCVLITDESVVALADWCVHLRSLGLYYCRNITDRAMYSLAQS-------G 273
Query: 334 LEGNPISDEVIAAFLEVKGSCLLELSLDSMEKVGQHTTL-------------SLANCTKL 380
++ P ++ VK E L S+ + Q T L +L C+
Sbjct: 274 VKNKP------GSWKSVKKGKYDEEGLRSLN-ISQCTALTPSAVQAVCDSFPALHTCSGR 326
Query: 381 HTLNLPRCVNMRDLELGFIVDKCRA 405
H+L + C+N+ + I+ RA
Sbjct: 327 HSLVMSGCLNLTTVHCACILQAHRA 351
>AT1G55590.1 | Symbols: | RNI-like superfamily protein |
chr1:20769476-20771756 REVERSE LENGTH=607
Length = 607
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 170 QLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCRSTLKELYL 229
L +RG+ L D + GS L+ + LS CP +TSE V L G C L+ L L
Sbjct: 338 NLKKFEVRGAFLLSDLAFHDVTGSSCSLQEVRLSTCPLITSEAVKKL-GLC-GNLEVLDL 395
Query: 230 DECSKLTGKDILSSLKNLECLEVLSIAGIGSVDDDFIMDYTVARG---LNLKGLSLRDCR 286
C ++ L+S+ L L L++AG D + A G + + LSLR CR
Sbjct: 396 GSCKSIS-DSCLNSVSALRKLTSLNLAGADVTDSGML-----ALGKSDVPITQLSLRGCR 449
Query: 287 FLTDVSVKAISEH----CPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLE 335
++D + + + L TLD+G++ +SD + +T+ C+A+ L +
Sbjct: 450 RVSDRGISYLLNNEGTISKTLSTLDLGHMPGISDRAIHTITHCCKALTELSIR 502
>AT1G77000.2 | Symbols: SKP2B | RNI-like superfamily protein |
chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 37/272 (13%)
Query: 156 ESAIPAVLAKKQLPQLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAM 215
++A+ A+ +L L L S+ + D L + C L +NLS C + +A
Sbjct: 106 DNAVEAI--ANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAH 163
Query: 216 LTGPCRSTLKELYLDECSKLTGKDILSSL-KNLECLEVLSIAGIGSVDDDFIMDYTVARG 274
LT CR LK L L C + + L ++ +N L+ L++ ++ DD +M ++A G
Sbjct: 164 LTRFCRK-LKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVM--SLAYG 220
Query: 275 L-NLKGLSLRDCRFLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLK 333
+L+ L L C +TD SV A++ C L +L + ++D +AM +L
Sbjct: 221 CPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITD----------RAMYSLA 270
Query: 334 LEGNPISDEVIAAFLEVKGSCLLELSLDSMEKVGQHTTL-------------SLANCTKL 380
G E+ A VK E L S+ + Q T L +L C+
Sbjct: 271 QSGVKNKHEMWRA---VKKGKFDEEGLRSLN-ISQCTYLTPSAVQAVCDTFPALHTCSGR 326
Query: 381 HTLNLPRCVNMRDLELGFIVDKCRALRSLTIH 412
H+L + C+N++ + I+ +A R+ T++
Sbjct: 327 HSLVMSGCLNLQSVHCACIL---QAHRTHTVY 355
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Query: 182 LEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCRSTLKELYLDECSKLTGKDIL 241
LED ++ I C +L+ ++LS ++T + L C + L +L L C+ + +
Sbjct: 104 LEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGC-TNLTKLNLSGCTSFSDTALA 162
Query: 242 SSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGLNLKGLSLRDCRFLTDVSVKAISEHCP 301
+ L++L++ G D + L+ L+L C ++D V +++ CP
Sbjct: 163 HLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCP 222
Query: 302 RLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKL 334
L TLD+ + + ++D S L N C +R+L L
Sbjct: 223 DLRTLDLCSCVLITDESVVALANRCIHLRSLGL 255
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 288 LTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEG-NPISDEVIA- 345
L D +V+AI+ HC L LD+ K++D S L C + L L G SD +A
Sbjct: 104 LEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAH 163
Query: 346 --------AFLEVKGSCLLELSLDSMEKVGQHTTLSLANCTKLHTLNLPRCVNMRDLELG 397
L + G C+ +S ++++ +G+ NC +L +LNL C N+ D +
Sbjct: 164 LTRFCRKLKILNLCG-CVEAVSDNTLQAIGE-------NCNQLQSLNLGWCENISDDGVM 215
Query: 398 FIVDKCRALRSLTIHHCCKVTRDFIDGHSN 427
+ C LR+L + C +T + + +N
Sbjct: 216 SLAYGCPDLRTLDLCSCVLITDESVVALAN 245
>AT1G77000.1 | Symbols: ATSKP2;2, SKP2B | RNI-like superfamily
protein | chr1:28940888-28942401 FORWARD LENGTH=360
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 121/272 (44%), Gaps = 37/272 (13%)
Query: 156 ESAIPAVLAKKQLPQLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAM 215
++A+ A+ +L L L S+ + D L + C L +NLS C + +A
Sbjct: 106 DNAVEAI--ANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAH 163
Query: 216 LTGPCRSTLKELYLDECSKLTGKDILSSL-KNLECLEVLSIAGIGSVDDDFIMDYTVARG 274
LT CR LK L L C + + L ++ +N L+ L++ ++ DD +M ++A G
Sbjct: 164 LTRFCRK-LKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVM--SLAYG 220
Query: 275 L-NLKGLSLRDCRFLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLK 333
+L+ L L C +TD SV A++ C L +L + ++D +AM +L
Sbjct: 221 CPDLRTLDLCSCVLITDESVVALANRCIHLRSLGLYYCRNITD----------RAMYSLA 270
Query: 334 LEGNPISDEVIAAFLEVKGSCLLELSLDSMEKVGQHTTL-------------SLANCTKL 380
G E+ A VK E L S+ + Q T L +L C+
Sbjct: 271 QSGVKNKHEMWRA---VKKGKFDEEGLRSLN-ISQCTYLTPSAVQAVCDTFPALHTCSGR 326
Query: 381 HTLNLPRCVNMRDLELGFIVDKCRALRSLTIH 412
H+L + C+N++ + I+ +A R+ T++
Sbjct: 327 HSLVMSGCLNLQSVHCACIL---QAHRTHTVY 355
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 1/153 (0%)
Query: 182 LEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCRSTLKELYLDECSKLTGKDIL 241
LED ++ I C +L+ ++LS ++T + L C + L +L L C+ + +
Sbjct: 104 LEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGC-TNLTKLNLSGCTSFSDTALA 162
Query: 242 SSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGLNLKGLSLRDCRFLTDVSVKAISEHCP 301
+ L++L++ G D + L+ L+L C ++D V +++ CP
Sbjct: 163 HLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLGWCENISDDGVMSLAYGCP 222
Query: 302 RLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKL 334
L TLD+ + + ++D S L N C +R+L L
Sbjct: 223 DLRTLDLCSCVLITDESVVALANRCIHLRSLGL 255
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 288 LTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEG-NPISDEVIA- 345
L D +V+AI+ HC L LD+ K++D S L C + L L G SD +A
Sbjct: 104 LEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTALAH 163
Query: 346 --------AFLEVKGSCLLELSLDSMEKVGQHTTLSLANCTKLHTLNLPRCVNMRDLELG 397
L + G C+ +S ++++ +G+ NC +L +LNL C N+ D +
Sbjct: 164 LTRFCRKLKILNLCG-CVEAVSDNTLQAIGE-------NCNQLQSLNLGWCENISDDGVM 215
Query: 398 FIVDKCRALRSLTIHHCCKVTRDFIDGHSN 427
+ C LR+L + C +T + + +N
Sbjct: 216 SLAYGCPDLRTLDLCSCVLITDESVVALAN 245
>AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE LENGTH=642
Length = 642
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 110/248 (44%), Gaps = 5/248 (2%)
Query: 168 LPQLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEG-VAMLTGPCRSTLKE 226
L +L +L + ++D GL+ + L+ ++++ C +++ G ++++ G ++
Sbjct: 221 LVKLEVLDMVSCPLIDDGGLQFLENGSPSLQEVDVTRCDRVSLSGLISIVRG--HPDIQL 278
Query: 227 LYLDECSKLTGKDILSSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGLNLKGLSLRDCR 286
L C L +K L+ L+ + I G D + + R L GLS C
Sbjct: 279 LKASHCVSEVSGSFLKYIKGLKHLKTIWIDGAHVSDSSLVSLSSSCRSLMEIGLS--RCV 336
Query: 287 FLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEGNPISDEVIAA 346
+TD+ + +++ +C L TL++ ++D++ + SC+ + TLKLE + E
Sbjct: 337 DVTDIGMISLARNCLNLKTLNLACCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKGLQ 396
Query: 347 FLEVKGSCLLELSLDSMEKVGQHTTLSLANCTKLHTLNLPRCVNMRDLELGFIVDKCRAL 406
L + EL L V ++ C+ L L L C N+ D + I KC L
Sbjct: 397 SLGCYSMLVQELDLTDCYGVNDRGLEYISKCSNLQRLKLGLCTNISDKGIFHIGSKCSKL 456
Query: 407 RSLTIHHC 414
L ++ C
Sbjct: 457 LELDLYRC 464
>AT5G67250.1 | Symbols: SKIP2, VFB4 | SKP1/ASK1-interacting protein
2 | chr5:26831677-26833260 REVERSE LENGTH=527
Length = 527
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 27/260 (10%)
Query: 166 KQLPQLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQL--TSEGVAMLTGPCRST 223
K L +L++ GS +G+ +L C+ LE +++ + +E + + S+
Sbjct: 159 KNLKKLSV----GSCNFGAKGVNAMLEHCKLLEELSVKRLRGIHEAAELIHLPDDASSSS 214
Query: 224 LKELYLDE-CSKLTGKDILSSLKNLECLEVLSIAGIGSVDDDFIMDYTVARGLNLKGLSL 282
L+ + L E + + +L++ + L+ L+++ G D D ++ +L + L
Sbjct: 215 LRSICLKELVNGQVFEPLLATTRTLKTLKIIRCLG----DWDKVLQMIANGKSSLSEIHL 270
Query: 283 RDCRFLTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEG---NPI 339
+ ++D+ + AIS+ C + TL I + S+ ++ C+ +R L ++G N I
Sbjct: 271 ERLQ-VSDIGLSAISK-CSNVETLHIVKTPECSNFGLIYVAERCKLLRKLHIDGWRTNRI 328
Query: 340 SDEVIAAFLEVKGSCLLELSLDSMEKVGQHTT-LSLA----NCTKLHTLNLPRCVNMRDL 394
DE L V CL +L + +G + T +SLA NC KL L L + D
Sbjct: 329 GDE---GLLSVAKHCL---NLQELVLIGVNATHMSLAAIASNCEKLERLALCGSGTIGDT 382
Query: 395 ELGFIVDKCRALRSLTIHHC 414
E+ I KC ALR I C
Sbjct: 383 EIACIARKCGALRKFCIKGC 402
>AT3G50080.1 | Symbols: VFB2 | VIER F-box proteine 2 |
chr3:18572788-18574356 FORWARD LENGTH=522
Length = 522
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 106/255 (41%), Gaps = 25/255 (9%)
Query: 172 NILSLR----GSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAMLTGPCR----ST 223
N SLR GS +G+ +L C+ LE ++L G+ L P + ++
Sbjct: 155 NCKSLRKLSCGSCTFGAKGINAMLEHCKVLEELSLK-----RIRGLHELAEPIKLSLSAS 209
Query: 224 LKELYLDECSKLTGKDILSSLKNLECLE-VLSIAGIGSVDDDFIMDYTVARGLNLKGLSL 282
L+ ++L E L + SL L+ V I +G+ D F M+ L +
Sbjct: 210 LRSVFLKE---LVNGQVFGSLVATRTLKKVKIIRCLGNWDRVFEMNGNGNSSLT----EI 262
Query: 283 RDCRF-LTDVSVKAISEHCPRLHTLDIGNLIKLSDLSFEFLTNSCQAMRTLKLEGNPISD 341
R R +TD+ + IS+ C L TL I S+L + C+ +R L ++G +
Sbjct: 263 RLERLQVTDIGLFGISK-CSNLETLHIVKTPDCSNLGLASVVERCKLLRKLHIDGWRVKR 321
Query: 342 EVIAAFLEVKGSCL--LELSLDSMEKVGQHTTLSLANCTKLHTLNLPRCVNMRDLELGFI 399
+ V CL EL L ++ + +NC KL L L + D E+G I
Sbjct: 322 IGDQGLMSVAKHCLNLQELVLIGVDATYMSLSAIASNCKKLERLALCGSGTIGDAEIGCI 381
Query: 400 VDKCRALRSLTIHHC 414
+KC LR I C
Sbjct: 382 AEKCVTLRKFCIKGC 396
>AT4G07400.1 | Symbols: VFB3 | VIER F-box proteine 3 |
chr4:4197847-4199511 REVERSE LENGTH=554
Length = 554
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 135/331 (40%), Gaps = 64/331 (19%)
Query: 157 SAIPAVLAK-KQLPQLNILSLRGSAYLEDQGLKLILGSCQKLESINLSICPQLTSEGVAM 215
S IP++ + + +L + S R S + D +I C+ L + L CP+++ G+
Sbjct: 125 SVIPSLFTRFDSVTKLVLRSDRRSLGICDNAFVMISVRCRNLTRLKLRGCPEISDLGIIG 184
Query: 216 LTGPCRSTLKELYLDECS-KLTGKD-ILSSLKNLECLEVLSIAGIGSVDD---------- 263
T CRS LK++ C + G + +L++ LE L V + GIG+ +
Sbjct: 185 FTENCRS-LKKVSFGSCGFGVKGMNALLNTCLGLEELSVKRLRGIGAGAELIGPGGAAGS 243
Query: 264 -------------DFIMDYTVARGLNLKGLSLRDC-----RFLTDV--SVKAISE-HCPR 302
F + A+GL + L + C R V V AI E H R
Sbjct: 244 LKVICLKELHNGQCFAPLLSGAKGLRI--LKIFRCSGDWDRVFEAVRDKVNAIVEIHLER 301
Query: 303 LHTLDIG-------------NLIKLSD---LSFEFLTNSCQAMRTLKLEG---NPISDEV 343
+ D+G +L+K D + + C+ +R L ++G N I DE
Sbjct: 302 IQMSDLGLTALSKCSGVEVLHLVKTPDCTNVGLALVAERCKLLRKLHIDGWKTNRIGDE- 360
Query: 344 IAAFLEVKGSC--LLELSLDSMEKVGQHTTLSLANCTKLHTLNLPRCVNMRDLELGFIVD 401
+ V C L EL L + ++NC L L L + D EL I +
Sbjct: 361 --GLIVVAKYCWNLQELVLIGVNPTKLSLEAIVSNCLNLERLALCGSDTVGDTELCCIAE 418
Query: 402 KCRALRSLTIHHCCKVTRDFID--GHSNPHL 430
KC ALR L I + C +T D I G+ P+L
Sbjct: 419 KCLALRKLCIKN-CPITDDGIKALGNGCPNL 448