Miyakogusa Predicted Gene
- Lj1g3v3556830.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3556830.1 Non Chatacterized Hit- tr|F6HKN9|F6HKN9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,21.53,4e-18,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; seg,NUL,CUFF.30840.1
(563 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 633 0.0
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 363 e-100
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 361 e-100
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 357 2e-98
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 357 2e-98
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 9e-98
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 352 4e-97
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 349 2e-96
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 347 1e-95
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 346 2e-95
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 343 1e-94
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 6e-94
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 9e-93
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 1e-92
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 335 7e-92
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 334 1e-91
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 332 4e-91
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 332 5e-91
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 331 8e-91
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 331 9e-91
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 330 2e-90
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 4e-90
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 327 1e-89
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 327 1e-89
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 326 2e-89
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 325 5e-89
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 8e-89
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 4e-88
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 320 2e-87
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 319 3e-87
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 6e-87
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 318 6e-87
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 318 8e-87
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 318 9e-87
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 2e-86
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 316 3e-86
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 315 4e-86
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 315 4e-86
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 5e-86
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 5e-86
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 314 9e-86
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 313 3e-85
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 311 9e-85
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 309 4e-84
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 307 1e-83
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 306 3e-83
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 305 5e-83
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 305 6e-83
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 305 6e-83
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 7e-83
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 1e-82
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 303 2e-82
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 3e-82
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 302 4e-82
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 5e-82
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 302 5e-82
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 3e-81
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 7e-81
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 9e-81
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 296 2e-80
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 3e-80
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 3e-79
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 293 3e-79
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 292 4e-79
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 292 5e-79
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 5e-79
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 2e-78
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 3e-78
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 6e-78
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 288 7e-78
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 286 3e-77
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 4e-77
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 4e-77
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 4e-77
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 6e-77
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 3e-76
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 281 6e-76
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 6e-76
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 9e-76
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 9e-76
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 281 1e-75
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 1e-75
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 2e-75
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 2e-75
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 6e-75
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 1e-74
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 277 1e-74
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 3e-74
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 4e-74
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 5e-74
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 273 2e-73
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 272 5e-73
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 270 2e-72
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 270 2e-72
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 4e-72
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 8e-72
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 266 3e-71
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 5e-71
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 265 6e-71
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 265 7e-71
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 7e-71
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 1e-70
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 1e-70
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 2e-70
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 263 3e-70
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 262 5e-70
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 261 1e-69
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 259 2e-69
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 2e-69
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 1e-68
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 1e-68
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 257 2e-68
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 7e-68
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 8e-68
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 4e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 6e-67
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 7e-67
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 251 9e-67
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 250 1e-66
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 249 3e-66
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 4e-66
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 5e-66
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 247 2e-65
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 246 2e-65
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 2e-65
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 246 3e-65
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 246 4e-65
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 4e-65
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 2e-64
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 243 2e-64
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 4e-64
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 239 3e-63
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 7e-62
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 6e-60
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 3e-59
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 6e-58
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 8e-58
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 9e-56
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 213 3e-55
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 9e-54
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 200 2e-51
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 200 3e-51
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 7e-51
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 5e-47
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 7e-47
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 7e-47
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 4e-44
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 5e-28
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 120 2e-27
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 6e-27
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 7e-27
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 118 1e-26
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 2e-26
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 116 3e-26
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 7e-26
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 3e-25
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 111 1e-24
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 4e-24
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 110 4e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 110 4e-24
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 4e-24
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 108 7e-24
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 108 8e-24
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 107 2e-23
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 2e-22
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 5e-22
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 6e-22
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 5e-21
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 99 7e-21
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 5e-20
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 96 9e-20
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 2e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 94 3e-19
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 4e-19
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 93 5e-19
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 92 1e-18
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 1e-18
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 3e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 5e-17
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 9e-17
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 84 2e-16
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 84 2e-16
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 7e-16
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 82 1e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 80 4e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 6e-15
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 79 1e-14
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 6e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 75 1e-13
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 72 1e-12
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 69 9e-12
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 4e-11
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 65 1e-10
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 64 4e-10
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 63 5e-10
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 62 8e-10
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 62 1e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 60 3e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 60 5e-09
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 60 6e-09
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 60 6e-09
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 633 bits (1632), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 303/546 (55%), Positives = 398/546 (72%), Gaps = 7/546 (1%)
Query: 20 IKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTT---INLATHAFSHMDNPNAL 76
IK+CS K LES A MIKT+ NQD LMNQFI ACT+ ++LA + M PN
Sbjct: 780 IKQCST--PKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVF 837
Query: 77 VYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHV 136
VYNAL + V C ++L YV+MLR+ V P+SY++SSLVKA + S G+++ H+
Sbjct: 838 VYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFA--SRFGESLQAHI 895
Query: 137 WKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAA 196
WK GF HV +QTTL++FYS G +ARKVFDEMPERD AWTTM+SA+ R ++DSA
Sbjct: 896 WKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSAN 955
Query: 197 RLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGD 256
L ++M E+N AT N +I+GY GN+E AE LFN+MP KD+ISWTT++ YS+NKR+ +
Sbjct: 956 SLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYRE 1015
Query: 257 VVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLID 316
+ +F++M+ G+ PDEV M+TVISACAHLG L +GKEVH Y + NGF LDVYIGS+L+D
Sbjct: 1016 AIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVD 1075
Query: 317 MYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVT 376
MY+KCGS++R+LLVF+ L KNLFCWNS+I+GLA HG+A+EALKMF++ME + ++PN VT
Sbjct: 1076 MYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVT 1135
Query: 377 FVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
FVSV TACTHAG V+EGR + SMI+DY I +EHYG MV L SK GLI +ALE+I M
Sbjct: 1136 FVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM 1195
Query: 437 TFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVS 496
FEPN+ IWGALL GC++H+NL IA +A LM+LEP NSGYY LLV+MYAE NRW++V+
Sbjct: 1196 EFEPNAVIWGALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVA 1255
Query: 497 KIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYV 556
+IR M++LG+EK CPG+S + I+++ HLFAA+D H++ V AGYV
Sbjct: 1256 EIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYV 1315
Query: 557 PELGSI 562
E ++
Sbjct: 1316 QETENV 1321
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/561 (35%), Positives = 324/561 (57%), Gaps = 41/561 (7%)
Query: 17 LDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAA---CTTINLATHAFSHMDNP 73
L + +C+ + ++ ++A +I+ N ++D + + I+A C NLA F+ + P
Sbjct: 23 LQDLPKCANLNQ--VKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEP 80
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
N + N+L+R + +QA + +M R G+ ++++ L+KAC+ K +H
Sbjct: 81 NVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMH 140
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAG------------------------------- 162
H+ K G + ++V L++ YS G G
Sbjct: 141 NHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGE 200
Query: 163 --DARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKS 220
DAR++FDEMP+RD +W TM+ + RC E+ A LF++MPERN+ +W+ M+ GY+K+
Sbjct: 201 LRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKA 260
Query: 221 GNIECAEILFNRMP--CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTT 278
G++E A ++F++MP K+V++WT ++ Y+ + L +MV+ GL D A+ +
Sbjct: 261 GDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVIS 320
Query: 279 VISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKN 338
+++AC G L LG +H L + G + Y+ ++L+DMYAKCG++ ++ VF + K+
Sbjct: 321 ILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKD 380
Query: 339 LFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFV 398
L WN+M+ GL HG+ KEA+++FS M R+GIRP+ VTF++VL +C HAG ++EG F
Sbjct: 381 LVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFY 440
Query: 399 SMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNL 458
SM + Y + P +EHYGC+VDLL + G +++A+++++ M EPN IWGALL C++H +
Sbjct: 441 SMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEV 500
Query: 459 EIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVE 518
+IA + NL+ L+P + G YSLL N+YA W+ V+ IR MK +GVEK G+S VE
Sbjct: 501 DIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPS-GASSVE 559
Query: 519 INQKIHLFAASDNYHTSYGHV 539
+ IH F D H +
Sbjct: 560 LEDGIHEFTVFDKSHPKSDQI 580
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 189/550 (34%), Positives = 300/550 (54%), Gaps = 40/550 (7%)
Query: 20 IKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTT------INLATHAFSHMDNP 73
++RCSK+E+ L+ ++A M+KT QDS+ + +F++ C + + A F D P
Sbjct: 21 LQRCSKQEE--LKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
+ ++N ++R ++L Y +ML + +Y+F SL+KAC+ L +H
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVD 193
+ K G+ E D +A ++I+++ G
Sbjct: 139 AQITKLGY-------------------------------ENDVYAVNSLINSYAVTGNFK 167
Query: 194 SAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKR 253
A LFD +PE + +WN++I GY K+G ++ A LF +M K+ ISWTT+++ Y +
Sbjct: 168 LAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADM 227
Query: 254 FGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSS 313
+ + LFHEM + + PD V++ +SACA LGAL GK +H YL +D +G
Sbjct: 228 NKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCV 287
Query: 314 LIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
LIDMYAKCG ++ +L VF ++ K++ W ++I G A HG+ +EA+ F EM++ GI+PN
Sbjct: 288 LIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPN 347
Query: 374 GVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMI 433
+TF +VLTAC++ G VEEG+ F SM DY + P IEHYGC+VDLL + GL+++A I
Sbjct: 348 VITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFI 407
Query: 434 RGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWK 493
+ M +PN+ IWGALL C++H+N+E+ + L+ ++P + G Y N++A +W
Sbjct: 408 QEMPLKPNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWD 467
Query: 494 EVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXA 553
+ ++ R MK+ GV K PG S + + H F A D H +
Sbjct: 468 KAAETRRLMKEQGVAKV-PGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEEN 526
Query: 554 GYVPELGSIL 563
GYVPEL +L
Sbjct: 527 GYVPELEEML 536
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 361 bits (926), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/545 (35%), Positives = 299/545 (54%), Gaps = 13/545 (2%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFIAACT-----TINLATHAFSHMDNPNALVYNALLR 83
+ L ++ IK + DS+ + I C + A P+A ++N L+R
Sbjct: 19 RALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFPEPDAFMFNTLVR 78
Query: 84 TCVHCHRSHQALACYVKMLRNGVV-PTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFD 142
H ++A +V+M+R G V P S+SF+ ++KA G +H K G +
Sbjct: 79 GYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLE 138
Query: 143 AHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM 202
+H+FV TTL+ Y G ARKVFDEM + + AW +I+A R +V A +FD+M
Sbjct: 139 SHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIFDKM 198
Query: 203 PERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFH 262
RN +WN M+ GY K+G +E A+ +F+ MP +D +SW+T++ + N F + F
Sbjct: 199 LVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFR 258
Query: 263 EMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG 322
E+ G++P+EV++T V+SAC+ G+ GK +H ++ G+ V + ++LIDMY++CG
Sbjct: 259 ELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCG 318
Query: 323 SIDRSLLVFYKLQVKN-LFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
++ + LVF +Q K + W SMI GLA HG +EA+++F+EM G+ P+G++F+S+L
Sbjct: 319 NVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLL 378
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPN 441
AC+HAG +EEG F M Y I P IEHYGCMVDL + G ++ A + I M P
Sbjct: 379 HACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPT 438
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIA 501
+ +W LL C H N+E+A Q L L+P+NSG LL N YA +WK+V+ IR +
Sbjct: 439 AIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKS 498
Query: 502 MKDLGVEKTCPGSSW--VEINQKIHLFAASDNYH-TSYGHVNXXXXXXXXXXXXAGYVPE 558
M ++KT ++W VE+ + ++ F A + AGY PE
Sbjct: 499 MIVQRIKKT---TAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKDEAGYTPE 555
Query: 559 LGSIL 563
+ S L
Sbjct: 556 VASAL 560
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/577 (32%), Positives = 307/577 (53%), Gaps = 46/577 (7%)
Query: 24 SKREKKTLESVYANMIKTNANQDSFLMNQFIAACTT---INLATHAFSHMDNPNALVYNA 80
S K L+ ++A ++ FL+ + I A ++ I A F + P +NA
Sbjct: 30 SATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNA 89
Query: 81 LLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRG 140
++R + AL Y M V P S++F L+KAC+ L G+ VH V++ G
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 141 FDAHVFVQTTLVEFYSMLGLAGDARKVFD--EMPERDAFAWTTMISAHVRCGEVDSAARL 198
FDA VFVQ L+ Y+ G AR VF+ +PER +WT ++SA+ + GE A +
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 199 FDEMPERN-SATWNAMID--------------------------------------GYAK 219
F +M + + W A++ YAK
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAK 269
Query: 220 SGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTV 279
G + A+ILF++M ++I W +++ Y++N + + +FHEM+++ + PD +++T+
Sbjct: 270 CGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSA 329
Query: 280 ISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL 339
ISACA +G+L + ++ Y+ + + DV+I S+LIDM+AKCGS++ + LVF + +++
Sbjct: 330 ISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV 389
Query: 340 FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVS 399
W++MI G HG A+EA+ ++ MER G+ PN VTF+ +L AC H+G V EG F +
Sbjct: 390 VVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG-WWFFN 448
Query: 400 MIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLE 459
+ D+ I+P +HY C++DLL + G ++ A E+I+ M +P +WGALLS CK HR++E
Sbjct: 449 RMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVE 508
Query: 460 IANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEI 519
+ A Q L ++PSN+G+Y L N+YA W V+++R+ MK+ G+ K G SWVE+
Sbjct: 509 LGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDV-GCSWVEV 567
Query: 520 NQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYV 556
++ F D H Y + G+V
Sbjct: 568 RGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFV 604
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 180/389 (46%), Gaps = 56/389 (14%)
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP 172
++SL+ + T A K +H + G F+ T L+ S G AR+VFD++P
Sbjct: 24 YASLIDSAT---HKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATW------------------ 210
F W +I + R A ++ M +S T+
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 211 -----------------NAMIDGYAKSGNIECAEILFNRMPCKD--VISWTTLMTCYSRN 251
N +I YAK + A +F +P + ++SWT +++ Y++N
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 200
Query: 252 KRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG 311
+ + +F +M + PD VA+ +V++A L L G+ +H ++ G ++ +
Sbjct: 201 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLL 260
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
SL MYAKCG + + ++F K++ NL WN+MI G A +GYA+EA+ MF EM K +R
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVR 320
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRF-----VSMIEDYCISPGIEHYGCMVDLLSKGGLI 426
P+ ++ S ++AC G +E+ RS + +D IS ++D+ +K G +
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS------SALIDMFAKCGSV 374
Query: 427 EDALEMIRGMTFEPNSFIWGALLSGCKLH 455
E A ++ T + + +W A++ G LH
Sbjct: 375 EGA-RLVFDRTLDRDVVVWSAMIVGYGLH 402
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 357 bits (915), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 211/616 (34%), Positives = 313/616 (50%), Gaps = 82/616 (13%)
Query: 29 KTLES---VYANMIKTNANQDSFLMNQFIAACTT------INLATHAFSHMDNPNALVYN 79
KTL+S ++A MIK + ++ +++ I C + A F + PN L++N
Sbjct: 44 KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWN 103
Query: 80 ALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKR 139
+ R AL YV M+ G++P SY+F ++K+C G+ +HGHV K
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 140 GFDAHVFVQTTLVEFYSMLGLAGDARKVFD------------------------------ 169
G D ++V T+L+ Y G DA KVFD
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLF 223
Query: 170 -EMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------PE------------------ 204
E+P +D +W MIS + G A LF +M P+
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 283
Query: 205 --RNSATW-------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYS 249
R W NA+ID Y+K G +E A LF R+P KDVISW TL+ Y+
Sbjct: 284 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYT 343
Query: 250 RNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL--MVNGFGLD 307
+ + + LF EM+ G P++V M +++ ACAHLGA+ +G+ +H Y+ + G
Sbjct: 344 HMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNA 403
Query: 308 VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMER 367
+ +SLIDMYAKCG I+ + VF + K+L WN+MI G A HG A + +FS M +
Sbjct: 404 SSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRK 463
Query: 368 KGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIE 427
GI+P+ +TFV +L+AC+H+G ++ GR F +M +DY ++P +EHYGCM+DLL GL +
Sbjct: 464 IGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFK 523
Query: 428 DALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYA 487
+A EMI M EP+ IW +LL CK+H N+E+ +NL+ +EP N G Y LL N+YA
Sbjct: 524 EAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYA 583
Query: 488 EVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXX 547
RW EV+K R + D G++K PG S +EI+ +H F D +H +
Sbjct: 584 SAGRWNEVAKTRALLNDKGMKKV-PGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEME 642
Query: 548 XXXXXAGYVPELGSIL 563
AG+VP+ +L
Sbjct: 643 VLLEKAGFVPDTSEVL 658
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 354 bits (909), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 185/536 (34%), Positives = 297/536 (55%), Gaps = 20/536 (3%)
Query: 33 SVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSH 92
SV+ M + N + L++ ++ + + A F +N + +N LL V +
Sbjct: 178 SVFDRMPEKNDVSWNALLSAYVQN-SKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIV 236
Query: 93 QALACYVKMLRNGVVP-----TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
+A + M VV T Y+ S + L D + + V F
Sbjct: 237 EARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDV-------------FT 283
Query: 148 QTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNS 207
T +V Y + +AR++FD+MPER+ +W M++ +V+ ++ A LFD MP RN
Sbjct: 284 WTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNV 343
Query: 208 ATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSR 267
+TWN MI GYA+ G I A+ LF++MP +D +SW ++ YS++ + + LF +M
Sbjct: 344 STWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMERE 403
Query: 268 GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRS 327
G + + ++ +S CA + AL LGK++H L+ G+ ++G++L+ MY KCGSI+ +
Sbjct: 404 GGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEA 463
Query: 328 LLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHA 387
+F ++ K++ WN+MI G + HG+ + AL+ F M+R+G++P+ T V+VL+AC+H
Sbjct: 464 NDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHT 523
Query: 388 GFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGA 447
G V++GR F +M +DY + P +HY CMVDLL + GL+EDA +++ M FEP++ IWG
Sbjct: 524 GLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGT 583
Query: 448 LLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGV 507
LL ++H N E+A A + +EP NSG Y LL N+YA RW +V K+R+ M+D GV
Sbjct: 584 LLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGV 643
Query: 508 EKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELGSIL 563
+K PG SW+EI K H F+ D +H + AGYV + +L
Sbjct: 644 KKV-PGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVL 698
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 146/288 (50%), Gaps = 18/288 (6%)
Query: 164 ARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNI 223
ARK+FDEMPERD +W MI +VR + A LF+ MPER+ +WN M+ GYA++G +
Sbjct: 114 ARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCV 173
Query: 224 ECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISAC 283
+ A +F+RMP K+ +SW L++ Y +N + + LF + L V+ ++
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL----VSWNCLLGGF 229
Query: 284 AHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWN 343
+ ++ + V DV +++I YA+ G ID + +F + V+++F W
Sbjct: 230 VKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWT 285
Query: 344 SMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
+M+ G + +EA ++F +M + N V++ ++L AG+V+ R + D
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPER----NEVSWNAML-----AGYVQGERMEMAKELFD 336
Query: 404 YCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
+ + M+ ++ G I +A + M + + W A+++G
Sbjct: 337 VMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIAG 383
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 352 bits (903), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 181/527 (34%), Positives = 302/527 (57%), Gaps = 38/527 (7%)
Query: 9 IHTLKDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTI---NLATH 65
I +++ + ++R R + + + A++I +Q SF++ + + C I + AT
Sbjct: 6 IREVENYFIPFLQRVKSRNE--WKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATR 63
Query: 66 AFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGV-VPTSYSFSSLVKACTLLM 124
F+ + NPN +YN+++R H + Y ++LR +P ++F + K+C L
Sbjct: 64 LFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLG 123
Query: 125 DSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMIS 184
GK VHGH+ K G HV + L++ Y DA KVFDEM ERD +W +++S
Sbjct: 124 SCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLS 183
Query: 185 AHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTL 244
+ R G++ A LF M ++ +W AMI GY G
Sbjct: 184 GYARLGQMKKAKGLFHLMLDKTIVSWTAMISGYTGIG----------------------- 220
Query: 245 MTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGF 304
CY + + F EM G+ PDE+++ +V+ +CA LG+L LGK +H Y GF
Sbjct: 221 --CYV------EAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGF 272
Query: 305 GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSE 364
+ ++LI+MY+KCG I +++ +F +++ K++ W++MI G A HG A A++ F+E
Sbjct: 273 LKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNE 332
Query: 365 MERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGG 424
M+R ++PNG+TF+ +L+AC+H G +EG F M +DY I P IEHYGC++D+L++ G
Sbjct: 333 MQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAG 392
Query: 425 LIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVN 484
+E A+E+ + M +P+S IWG+LLS C+ NL++A VA+ +L+ LEP + G Y LL N
Sbjct: 393 KLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLAN 452
Query: 485 MYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDN 531
+YA++ +W++VS++R +++ ++KT PG S +E+N + F + DN
Sbjct: 453 IYADLGKWEDVSRLRKMIRNENMKKT-PGGSLIEVNNIVQEFVSGDN 498
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/487 (37%), Positives = 284/487 (58%), Gaps = 7/487 (1%)
Query: 31 LESVYANMIKTNANQDSFLMNQFIA-ACTTINLATHAFSH-----MDNPNALVYNALLRT 84
++ +A M+KT D+F ++ +A A T T +++H + +PN +N+++R
Sbjct: 55 IQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRA 114
Query: 85 CVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
+ AL + +ML V P YSF+ ++KAC G+ +HG K G
Sbjct: 115 YANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTD 174
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE 204
VFV+ TLV Y G ARKV D MP RDA +W +++SA++ G VD A LFDEM E
Sbjct: 175 VFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEE 234
Query: 205 RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM 264
RN +WN MI GYA +G ++ A+ +F+ MP +DV+SW ++T Y+ + +V+ +F++M
Sbjct: 235 RNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKM 294
Query: 265 VSRGL-APDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGS 323
+ PD + +V+SACA LG+L G+ VH Y+ +G ++ ++ ++L+DMY+KCG
Sbjct: 295 LDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGK 354
Query: 324 IDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTA 383
ID++L VF +++ WNS+I L+ HG K+AL++FSEM +G +PNG+TF+ VL+A
Sbjct: 355 IDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSA 414
Query: 384 CTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSF 443
C H G +++ R F M Y + P IEHYGCMVDLL + G IE+A E++ + + S
Sbjct: 415 CNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASI 474
Query: 444 IWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMK 503
+ +LL CK LE A L+ L +S Y+ + N+YA RW++V R M+
Sbjct: 475 LLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMR 534
Query: 504 DLGVEKT 510
V ++
Sbjct: 535 AERVNRS 541
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 347 bits (891), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 291/559 (52%), Gaps = 32/559 (5%)
Query: 16 ILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINL-------ATHAFS 68
+ QI C R + L ++A IK+ +D+ + + C T +L A F+
Sbjct: 26 LFPQINNC--RTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFN 83
Query: 69 HMDNPNALVYNALLRTCVHCHRSHQALAC---YVKMLRNGVVPTSYSFSSLVKACTLLMD 125
M N +N ++R +A Y M V P ++F S++KAC
Sbjct: 84 QMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGK 143
Query: 126 SAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF-DEMPERDAFAWTTMIS 184
GK +HG K GF FV + LV Y M G DAR +F + E+D M
Sbjct: 144 IQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDM---VVMTD 200
Query: 185 AHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTL 244
R GE+ WN MIDGY + G+ + A +LF++M + V+SW T+
Sbjct: 201 RRKRDGEI---------------VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTM 245
Query: 245 MTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGF 304
++ YS N F D V +F EM + P+ V + +V+ A + LG+L LG+ +H Y +G
Sbjct: 246 ISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGI 305
Query: 305 GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSE 364
+D +GS+LIDMY+KCG I++++ VF +L +N+ W++MI+G A HG A +A+ F +
Sbjct: 306 RIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCK 365
Query: 365 MERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGG 424
M + G+RP+ V ++++LTAC+H G VEEGR F M+ + P IEHYGCMVDLL + G
Sbjct: 366 MRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSG 425
Query: 425 LIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVN 484
L+++A E I M +P+ IW ALL C++ N+E+ LM + P +SG Y L N
Sbjct: 426 LLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSN 485
Query: 485 MYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXX 544
MYA W EVS++R+ MK+ + K PG S ++I+ +H F D+ H +N
Sbjct: 486 MYASQGNWSEVSEMRLRMKEKDIRKD-PGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLV 544
Query: 545 XXXXXXXXAGYVPELGSIL 563
AGY P +L
Sbjct: 545 EISDKLRLAGYRPITTQVL 563
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 184/572 (32%), Positives = 301/572 (52%), Gaps = 76/572 (13%)
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDS 126
F + +P L + +++R +ALA +V+M +G P F S++K+CT++MD
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 127 AAGKTVHGHVWKRGFDAHVFVQTTLVEFYS-MLGL-------------------AGD--- 163
G++VHG + + G D ++ L+ Y+ +LG+ +GD
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 164 -------------ARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------PE 204
R+VF+ MP +D ++ T+I+ + + G + A R+ EM P+
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPD 241
Query: 205 RNSAT---------------------------------WNAMIDGYAKSGNIECAEILFN 231
+ + ++++D YAKS IE +E +F+
Sbjct: 242 SFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFS 301
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
R+ C+D ISW +L+ Y +N R+ + + LF +MV+ + P VA ++VI ACAHL L L
Sbjct: 302 RLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHL 361
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
GK++H Y++ GFG +++I S+L+DMY+KCG+I + +F ++ V + W ++I G A
Sbjct: 362 GKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHAL 421
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIE 411
HG+ EA+ +F EM+R+G++PN V FV+VLTAC+H G V+E F SM + Y ++ +E
Sbjct: 422 HGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELE 481
Query: 412 HYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMIL 471
HY + DLL + G +E+A I M EP +W LLS C +H+NLE+A + + +
Sbjct: 482 HYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTV 541
Query: 472 EPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDN 531
+ N G Y L+ NMYA RWKE++K+R+ M+ G+ K P SW+E+ K H F + D
Sbjct: 542 DSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKK-PACSWIEMKNKTHGFVSGDR 600
Query: 532 YHTSYGHVNXXXXXXXXXXXXAGYVPELGSIL 563
H S +N GYV + +L
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYVADTSGVL 632
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 179/412 (43%), Gaps = 78/412 (18%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
I+ F M + + YN ++ AL +M + P S++ SS++
Sbjct: 192 IDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPI 251
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAW 179
+ +D GK +HG+V ++G D+ V++ ++LV+ Y+ D+ +VF + RD +W
Sbjct: 252 FSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISW 311
Query: 180 TTMISAHVRCGEVDSAARLFDEMPE----------------------------------- 204
++++ +V+ G + A RLF +M
Sbjct: 312 NSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLR 371
Query: 205 ----RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTL 260
N +A++D Y+K GNI+ A +F+RM D +SWT ++ ++ + + V+L
Sbjct: 372 GGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSL 431
Query: 261 FHEMVSRGLAPDEVAMTTVISACAHLGAL--------------GLGKEVHHYLMV----- 301
F EM +G+ P++VA V++AC+H+G + GL +E+ HY V
Sbjct: 432 FEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG 491
Query: 302 -NGFGLDVY----------IGSSLIDMYAKCGSIDRSLLVFYKLQVK-------NLFCWN 343
G + Y GS + + C S+ ++L + K+ K N+ +
Sbjct: 492 RAGKLEEAYNFISKMCVEPTGSVWSTLLSSC-SVHKNLELAEKVAEKIFTVDSENMGAYV 550
Query: 344 SMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS 395
M + A++G KE K+ M +KG+R + TH GFV RS
Sbjct: 551 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTH-GFVSGDRS 601
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 343 bits (881), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 174/474 (36%), Positives = 268/474 (56%), Gaps = 42/474 (8%)
Query: 98 YVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSM 157
Y M RNGV+P+ ++F L+KA L DS + H H+ K G D+ FV+ +L+ YS
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQ-FHAHIVKFGLDSDPFVRNSLISGYSS 150
Query: 158 LGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSAT-------- 209
GL A ++FD ++D WT MI VR G A F EM + A
Sbjct: 151 SGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSV 210
Query: 210 --------------------------------WNAMIDGYAKSGNIECAEILFNRMPCKD 237
++++D Y K + A+ +F+ MP ++
Sbjct: 211 LKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN 270
Query: 238 VISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHH 297
V++WT L+ Y +++ F + +F EM+ +AP+E +++V+SACAH+GAL G+ VH
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHC 330
Query: 298 YLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKE 357
Y++ N ++ G++LID+Y KCG ++ ++LVF +L KN++ W +MI+G A HGYA++
Sbjct: 331 YMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARD 390
Query: 358 ALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMV 417
A +F M + PN VTF++VL+AC H G VEEGR F+SM + + P +HY CMV
Sbjct: 391 AFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMV 450
Query: 418 DLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSG 477
DL + GL+E+A +I M EP + +WGAL C LH++ E+ A ++ L+PS+SG
Sbjct: 451 DLFGRKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSG 510
Query: 478 YYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDN 531
Y+LL N+Y+E W EV+++R MKD V K+ PG SW+E+ K+ F A D+
Sbjct: 511 RYTLLANLYSESQNWDEVARVRKQMKDQQVVKS-PGFSWIEVKGKLCEFIAFDD 563
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 95/230 (41%), Gaps = 41/230 (17%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSL 116
C+ + A F M + N + + AL+ V + + + +ML++ V P + SS+
Sbjct: 253 CSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSV 312
Query: 117 VKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDA 176
+ AC + G+ VH ++ K + + TTL++ Y G +A VF+ + E++
Sbjct: 313 LSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNV 372
Query: 177 FAWT--------------------TMISAHVRCGE---------------VDSAARLFDE 201
+ WT TM+S+HV E V+ RLF
Sbjct: 373 YTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLS 432
Query: 202 MPER-----NSATWNAMIDGYAKSGNIECAEILFNRMPCKDV-ISWTTLM 245
M R + + M+D + + G +E A+ L RMP + + W L
Sbjct: 433 MKGRFNMEPKADHYACMVDLFGRKGLLEEAKALIERMPMEPTNVVWGALF 482
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 342 bits (876), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 192/599 (32%), Positives = 305/599 (50%), Gaps = 82/599 (13%)
Query: 43 ANQDSFLMNQFIAACTT----INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACY 98
A +F F+ C+ ++ A F + P+ +V+N +++ + + Y
Sbjct: 63 APNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLY 122
Query: 99 VKMLRNGVVPTSYSFSSLVKACTLLMDSAA---GKTVHGHVWKRGFDAHVFVQTTLVEFY 155
+ ML+ GV P S++F L+ L D A GK +H HV K G ++++VQ LV+ Y
Sbjct: 123 LNMLKEGVTPDSHTFPFLLNG--LKRDGGALACGKKLHCHVVKFGLGSNLYVQNALVKMY 180
Query: 156 SMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERN-----SATW 210
S+ GL AR VFD + D F+W MIS + R E + + L EM ERN S T
Sbjct: 181 SLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM-ERNLVSPTSVTL 239
Query: 211 -----------------------------------NAMIDGYAKSGNIECA--------- 226
NA+++ YA G ++ A
Sbjct: 240 LLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMKA 299
Query: 227 ----------------------EILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM 264
F++MP +D ISWT ++ Y R F + + +F EM
Sbjct: 300 RDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESLEIFREM 359
Query: 265 VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSI 324
S G+ PDE M +V++ACAHLG+L +G+ + Y+ N DV +G++LIDMY KCG
Sbjct: 360 QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCS 419
Query: 325 DRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
+++ VF+ + ++ F W +M+ GLA +G +EA+K+F +M+ I+P+ +T++ VL+AC
Sbjct: 420 EKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSAC 479
Query: 385 THAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFI 444
H+G V++ R F M D+ I P + HYGCMVD+L + GL+++A E++R M PNS +
Sbjct: 480 NHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPMNPNSIV 539
Query: 445 WGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKD 504
WGALL +LH + +A +A + ++ LEP N Y+LL N+YA RWK++ ++R + D
Sbjct: 540 WGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVD 599
Query: 505 LGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELGSIL 563
+ ++KT PG S +E+N H F A D H + A Y+P+ +L
Sbjct: 600 VAIKKT-PGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAYLPDTSELL 657
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 180/524 (34%), Positives = 296/524 (56%), Gaps = 13/524 (2%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFIAACT-----TINLATHAFSHMDNPNALVYNALLR 83
+TL+ ++A+M+ + ++ + I + + + A F + P+ + N +LR
Sbjct: 26 RTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLR 85
Query: 84 TCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDA 143
+ + ++ Y +M + GV P Y+F+ ++KAC+ L + G HG V + GF
Sbjct: 86 GSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVL 145
Query: 144 HVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP 203
+ +V+ L+ F++ G G A ++FD+ + AW++M S + + G++D A RLFDEMP
Sbjct: 146 NEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMP 205
Query: 204 ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHE 263
++ WN MI G K ++ A LF+R KDV++W +++ Y + + +F E
Sbjct: 206 YKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKE 265
Query: 264 MVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM-VNGFGLDVYIGS----SLIDMY 318
M G PD V + +++SACA LG L GK +H Y++ +Y+G+ +LIDMY
Sbjct: 266 MRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMY 325
Query: 319 AKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFV 378
AKCGSIDR++ VF ++ ++L WN++I GLA H +A+ +++MF EM+R + PN VTF+
Sbjct: 326 AKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGSIEMFEEMQRLKVWPNEVTFI 384
Query: 379 SVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF 438
V+ AC+H+G V+EGR F M + Y I P I+HYGCMVD+L + G +E+A + M
Sbjct: 385 GVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKI 444
Query: 439 EPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKI 498
EPN+ +W LL CK++ N+E+ A + L+ + SG Y LL N+YA +W V K+
Sbjct: 445 EPNAIVWRTLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKV 504
Query: 499 RIAMKDLGVEKTCPGSSWVEINQKIHL--FAASDNYHTSYGHVN 540
R D V+K S E + K+ + +S+ S G +N
Sbjct: 505 RKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPESRSRGRIN 548
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 181/513 (35%), Positives = 291/513 (56%), Gaps = 40/513 (7%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFIAACTT---INLATHAFSHMDNPNALVYNALLR-- 83
KTL+ + MI T N+D+ + +FI AC+ + A F+H PN ++N ++R
Sbjct: 29 KTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRAL 88
Query: 84 TCVHCHRSHQ-ALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFD 142
+ + +H A+ Y K+ P +++F ++K + D G+ +HG V GFD
Sbjct: 89 SLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFD 148
Query: 143 AHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM 202
+ V V T L++ Y CG + A ++FDEM
Sbjct: 149 SSVHVVTGLIQMY-------------------------------FSCGGLGDARKMFDEM 177
Query: 203 PERNSATWNAMIDGYAKSGNIECAEILFNRMPC--KDVISWTTLMTCYSRNKRFGDVVTL 260
++ WNA++ GY K G ++ A L MPC ++ +SWT +++ Y+++ R + + +
Sbjct: 178 LVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEV 237
Query: 261 FHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAK 320
F M+ + PDEV + V+SACA LG+L LG+ + Y+ G V + +++IDMYAK
Sbjct: 238 FQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAK 297
Query: 321 CGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSV 380
G+I ++L VF + +N+ W ++I GLATHG+ EAL MF+ M + G+RPN VTF+++
Sbjct: 298 SGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAI 357
Query: 381 LTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEP 440
L+AC+H G+V+ G+ F SM Y I P IEHYGCM+DLL + G + +A E+I+ M F+
Sbjct: 358 LSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKA 417
Query: 441 NSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRI 500
N+ IWG+LL+ +H +LE+ A+ L+ LEP+NSG Y LL N+Y+ + RW E +R
Sbjct: 418 NAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRN 477
Query: 501 AMKDLGVEKTCPGSSWVEINQKIHLFAASDNYH 533
MK +GV+K G S +E+ +++ F + D H
Sbjct: 478 MMKGIGVKKMA-GESSIEVENRVYKFISGDLTH 509
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 182/542 (33%), Positives = 297/542 (54%), Gaps = 43/542 (7%)
Query: 31 LESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSH-----MDNPNALVYNALLRTC 85
++ ++ ++++ +Q +++ + I T + + ++ + N ++ A++R
Sbjct: 65 IKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGY 124
Query: 86 VHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWK-RGFDAH 144
+ +A+A Y M + + P S++FS+L+KAC + D G+ H ++ RGF
Sbjct: 125 AIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGF-CF 183
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE 204
V+V T+++ Y V+C +D A ++FDEMPE
Sbjct: 184 VYVGNTMIDMY-------------------------------VKCESIDCARKVFDEMPE 212
Query: 205 RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM 264
R+ +W +I YA+ GN+ECA LF +P KD+++WT ++T +++N + + + F M
Sbjct: 213 RDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRM 272
Query: 265 VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLD--VYIGSSLIDMYAKCG 322
G+ DEV + ISACA LGA +G+ V IGS+LIDMY+KCG
Sbjct: 273 EKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCG 332
Query: 323 SIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM-ERKGIRPNGVTFVSVL 381
+++ ++ VF + KN+F ++SMI GLATHG A+EAL +F M + I+PN VTFV L
Sbjct: 333 NVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGAL 392
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPN 441
AC+H+G V++GR F SM + + + P +HY CMVDLL + G +++ALE+I+ M+ EP+
Sbjct: 393 MACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPH 452
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIA 501
+WGALL C++H N EIA +A ++L LEP G Y LL N+YA W V ++R
Sbjct: 453 GGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKL 512
Query: 502 MKDLGVEKTCPGSSW-VEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELG 560
+K+ G++KT P SW V+ N ++H F + H + GY P+L
Sbjct: 513 IKEKGLKKT-PAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLS 571
Query: 561 SI 562
S+
Sbjct: 572 SV 573
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Query: 273 EVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG-SIDR-SLLV 330
E+ ++++IS L K++H +++ G YI + LI K G +D + V
Sbjct: 46 ELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRV 105
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
+Q +N F W ++I G A G EA+ M+ M ++ I P TF ++L AC +
Sbjct: 106 IEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDL 165
Query: 391 EEGRS 395
GR
Sbjct: 166 NLGRQ 170
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 337 bits (865), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 192/602 (31%), Positives = 299/602 (49%), Gaps = 87/602 (14%)
Query: 12 LKDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHA---FS 68
++++++D +C E V+ M + N + N + T + A F
Sbjct: 57 IQNRLIDAYSKCGSLEDG--RQVFDKMPQRNI----YTWNSVVTGLTKLGFLDEADSLFR 110
Query: 69 HMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAA 128
M + +N+++ R +AL + M + G V YSF+S++ AC+ L D
Sbjct: 111 SMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNK 170
Query: 129 GKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVR 188
G VH + K F + V++ + LV+ YS G DA++VFDEM +R+ +W ++I+ +
Sbjct: 171 GVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQ 230
Query: 189 CGEVDSAARLFDEMPE---------------------------------------RNSAT 209
G A +F M E RN
Sbjct: 231 NGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDII 290
Query: 210 W-NAMIDGYAKSGNIECAEILFNRMPCKDVI----------------------------- 239
NA +D YAK I+ A +F+ MP ++VI
Sbjct: 291 LSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERN 350
Query: 240 --SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHH 297
SW L+ Y++N + ++LF + + P + ++ ACA L L LG + H
Sbjct: 351 VVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHV 410
Query: 298 YLMVNGFGL------DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
+++ +GF D+++G+SLIDMY KCG ++ LVF K+ ++ WN+MI G A
Sbjct: 411 HVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQ 470
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIE 411
+GY EAL++F EM G +P+ +T + VL+AC HAGFVEEGR F SM D+ ++P +
Sbjct: 471 NGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRD 530
Query: 412 HYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMIL 471
HY CMVDLL + G +E+A MI M +P+S IWG+LL+ CK+HRN+ + + L+ +
Sbjct: 531 HYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEKLLEV 590
Query: 472 EPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDN 531
EPSNSG Y LL NMYAE+ +W++V +R +M+ GV K PG SW++I H+F D
Sbjct: 591 EPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQ-PGCSWIKIQGHDHVFMVKDK 649
Query: 532 YH 533
H
Sbjct: 650 SH 651
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 165/321 (51%), Gaps = 32/321 (9%)
Query: 110 SYSFSSLVKACTLLMDSAA-GKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF 168
S F+ L+ +C SA + VH V K GF +F+Q L++ YS
Sbjct: 19 SSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYS------------ 66
Query: 169 DEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEI 228
+CG ++ ++FD+MP+RN TWN+++ G K G ++ A+
Sbjct: 67 -------------------KCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADS 107
Query: 229 LFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA 288
LF MP +D +W ++++ ++++ R + + F M G +E + +V+SAC+ L
Sbjct: 108 LFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLND 167
Query: 289 LGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDG 348
+ G +VH + + F DVYIGS+L+DMY+KCG+++ + VF ++ +N+ WNS+I
Sbjct: 168 MNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITC 227
Query: 349 LATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISP 408
+G A EAL +F M + P+ VT SV++AC ++ G+ ++++ +
Sbjct: 228 FEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRN 287
Query: 409 GIEHYGCMVDLLSKGGLIEDA 429
I VD+ +K I++A
Sbjct: 288 DIILSNAFVDMYAKCSRIKEA 308
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 86/187 (45%), Gaps = 33/187 (17%)
Query: 295 VHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLF-------------- 340
VH ++ +GF +++I + LID Y+KCGS++ VF K+ +N++
Sbjct: 42 VHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGF 101
Query: 341 -----------------CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTA 383
WNSM+ G A H +EAL F+ M ++G N +F SVL+A
Sbjct: 102 LDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSA 161
Query: 384 CTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSF 443
C+ + +G + S+I + +VD+ SK G + DA + M + N
Sbjct: 162 CSGLNDMNKG-VQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG-DRNVV 219
Query: 444 IWGALLS 450
W +L++
Sbjct: 220 SWNSLIT 226
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 337 bits (864), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/550 (32%), Positives = 295/550 (53%), Gaps = 49/550 (8%)
Query: 61 NLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKAC 120
NL T ++D + +N+++ S +AL + M + + PT SF +KAC
Sbjct: 27 NLTTLFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKAC 86
Query: 121 TLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWT 180
+ L D +GK H + G+ + +FV + L+ YS G DARKVFDE+P+R+ +WT
Sbjct: 87 SSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWT 146
Query: 181 TMISAHVRCGEVDSAARLFDEM----------------------------P--------- 203
+MI + G A LF ++ P
Sbjct: 147 SMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206
Query: 204 --------ERNSATWNAMIDGYAKSGN--IECAEILFNRMPCKDVISWTTLMTCYSRNKR 253
+R + N ++D YAK G + A +F+++ KD +S+ ++M+ Y+++
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 254 FGDVVTLFHEMVSRGLAP-DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
+ +F +V + + + ++TV+ A +H GAL +GK +H ++ G DV +G+
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRP 372
S+IDMY KCG ++ + F +++ KN+ W +MI G HG+A +AL++F M G+RP
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 373 NGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM 432
N +TFVSVL AC+HAG EG F +M + + PG+EHYGCMVDLL + G ++ A ++
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 433 IRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRW 492
I+ M +P+S IW +LL+ C++H+N+E+A ++V L L+ SN GYY LL ++YA+ RW
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRW 506
Query: 493 KEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXX 552
K+V ++R+ MK+ G+ K PG S +E+N ++H+F D H +
Sbjct: 507 KDVERVRMIMKNRGLVKP-PGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLE 565
Query: 553 AGYVPELGSI 562
AGYV S+
Sbjct: 566 AGYVSNTSSV 575
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 81/178 (45%), Gaps = 21/178 (11%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRT-CVHCHRSHQALACYVKMLRNGVVPTSYSFSS 115
C + A AF M N N + A++ +H H + +AL + M+ +GV P +F S
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH-AAKALELFPAMIDSGVRPNYITFVS 393
Query: 116 LVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEF---YSMLGLAGDARKVFDEMP 172
++ AC S AG V G W V+ L + +LG AG +K +D +
Sbjct: 394 VLAAC-----SHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQ 448
Query: 173 ----ERDAFAWTTMISA-----HVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSG 221
+ D+ W+++++A +V E+ S ARLF E+ N + + YA +G
Sbjct: 449 RMKMKPDSIIWSSLLAACRIHKNVELAEI-SVARLF-ELDSSNCGYYMLLSHIYADAG 504
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 335 bits (858), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 183/525 (34%), Positives = 299/525 (56%), Gaps = 40/525 (7%)
Query: 31 LESVYANMIKTNANQDSFLMNQFIAACTTINLATH----AFSHMDNPNALVYNALLRTCV 86
L ++A +I+ QD L++ FI++ ++ + + F + +P ++N L++
Sbjct: 26 LNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYS 85
Query: 87 HCHRSHQALACYVKMLRNGVV-PTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHV 145
+ + ++ ++M+R G+ P Y+F ++K C+ G +VHG V + GFD V
Sbjct: 86 NKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDV 145
Query: 146 FVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER 205
V T+ V+FY ARKVF EMPER+A +WT ++ A+V+ GE++ A +FD MPER
Sbjct: 146 VVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPER 205
Query: 206 NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVIS------------------------- 240
N +WNA++DG KSG++ A+ LF+ MP +D+IS
Sbjct: 206 NLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKGGDMVSARDLFEEAR 265
Query: 241 ------WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKE 294
W+ L+ Y++N + + +F EM ++ + PDE M ++SAC+ +G L ++
Sbjct: 266 GVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEK 325
Query: 295 VHHYL--MVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATH 352
V YL +N F Y+ +LIDM AKCG +DR+ +F ++ ++L + SM++G+A H
Sbjct: 326 VDSYLHQRMNKFS-SHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIH 384
Query: 353 GYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH 412
G EA+++F +M +GI P+ V F +L C + VEEG F M + Y I +H
Sbjct: 385 GCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDH 444
Query: 413 YGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILE 472
Y C+V+LLS+ G +++A E+I+ M FE ++ WG+LL GC LH N EIA V ++L LE
Sbjct: 445 YSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELE 504
Query: 473 PSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWV 517
P ++G Y LL N+YA ++RW +V+ +R M + G+ K C G SW+
Sbjct: 505 PQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKIC-GRSWI 548
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 189/621 (30%), Positives = 311/621 (50%), Gaps = 80/621 (12%)
Query: 20 IKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIA-----ACTTINLATHAFSHMDNPN 74
I+RC + L+ + +MI+T D + ++ A + ++ A F + PN
Sbjct: 37 IERCVSL--RQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPN 94
Query: 75 ALVYNALLRTCVHCHRSHQALACYVKML-RNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
+ +N L+R ++ ++ M+ + P Y+F L+KA + + G+++H
Sbjct: 95 SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVD 193
G K + VFV +L+ Y G A KVF + E+D +W +MI+ V+ G D
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 194 SAARLFDEMPER---------------------------------------NSATWNAMI 214
A LF +M N NAM+
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 274
Query: 215 DGYAKSGNIECAEILF-------------------------------NRMPCKDVISWTT 243
D Y K G+IE A+ LF N MP KD+++W
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 244 LMTCYSRNKRFGDVVTLFHEM-VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVN 302
L++ Y +N + + + +FHE+ + + + +++ + + +SACA +GAL LG+ +H Y+ +
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 303 GFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMF 362
G ++ ++ S+LI MY+KCG +++S VF ++ +++F W++MI GLA HG EA+ MF
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 363 SEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSK 422
+M+ ++PNGVTF +V AC+H G V+E S F M +Y I P +HY C+VD+L +
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 514
Query: 423 GGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLL 482
G +E A++ I M P++ +WGALL CK+H NL +A +A L+ LEP N G + LL
Sbjct: 515 SGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLL 574
Query: 483 VNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXX 542
N+YA++ +W+ VS++R M+ G++K PG S +EI+ IH F + DN H V
Sbjct: 575 SNIYAKLGKWENVSELRKHMRVTGLKKE-PGCSSIEIDGMIHEFLSGDNAHPMSEKVYGK 633
Query: 543 XXXXXXXXXXAGYVPELGSIL 563
GY PE+ +L
Sbjct: 634 LHEVMEKLKSNGYEPEISQVL 654
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 332 bits (851), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 171/497 (34%), Positives = 273/497 (54%), Gaps = 42/497 (8%)
Query: 78 YNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVW 137
+N LR + ++++ Y MLR+G P ++SF ++K+C L +G+ +H HV
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 138 KRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA--WTTMISAHVRCGEVDSA 195
K G + FV T L+ Y GL DARKVF+E P+ + + +IS + +V A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 196 ARLFDEMPE---------------------------------------RNSATWNAMIDG 216
A +F M E A N+ I
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITM 200
Query: 217 YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAM 276
Y K G++E LF+ MP K +I+W +++ YS+N DV+ L+ +M S G+ PD +
Sbjct: 201 YMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTL 260
Query: 277 TTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV 336
+V+S+CAHLGA +G EV + NGF +V++ ++ I MYA+CG++ ++ VF + V
Sbjct: 261 VSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPV 320
Query: 337 KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSR 396
K+L W +MI HG + L +F +M ++GIRP+G FV VL+AC+H+G ++G
Sbjct: 321 KSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLEL 380
Query: 397 FVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHR 456
F +M +Y + PG EHY C+VDLL + G +++A+E I M EP+ +WGALL CK+H+
Sbjct: 381 FRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHK 440
Query: 457 NLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSW 516
N+++A +A ++ EP+N GYY L+ N+Y++ + + +IR+ M++ K PG S+
Sbjct: 441 NVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKK-PGYSY 499
Query: 517 VEINQKIHLFAASDNYH 533
VE ++HLF A D H
Sbjct: 500 VEHKGRVHLFLAGDRSH 516
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 177/437 (40%), Gaps = 59/437 (13%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIA---ACTTINLATHAFSHMDNPNA----LVYNALLRT 84
+ ++ ++ K + F++ I+ C + A F +NP + + YNAL+
Sbjct: 73 QQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFE--ENPQSSQLSVCYNALISG 130
Query: 85 CVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
+ A + +M GV S + LV CT+ G+++HG K G D+
Sbjct: 131 YTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSE 190
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM-- 202
V V + + Y G R++FDEMP + W +IS + + G L+++M
Sbjct: 191 VAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKS 250
Query: 203 ----PE---------------------------------RNSATWNAMIDGYAKSGNIEC 225
P+ N NA I YA+ GN+
Sbjct: 251 SGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAK 310
Query: 226 AEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAH 285
A +F+ MP K ++SWT ++ CY + + LF +M+ RG+ PD V+SAC+H
Sbjct: 311 ARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSH 370
Query: 286 LGALGLGKEVHHYLMVNGFGLDVYIG--SSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCW 342
G G E+ M + L+ S L+D+ + G +D ++ + V+ + W
Sbjct: 371 SGLTDKGLELFR-AMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVW 429
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
+++ H A F+++ PN + + +++ +EG R M+
Sbjct: 430 GALLGACKIHKNVDMAELAFAKVIE--FEPNNIGYYVLMSNIYSDSKNQEGIWRIRVMMR 487
Query: 403 DYCI--SPG---IEHYG 414
+ PG +EH G
Sbjct: 488 ERAFRKKPGYSYVEHKG 504
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 332 bits (850), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 281/504 (55%), Gaps = 39/504 (7%)
Query: 33 SVYANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDNPNALVYNALLRTCVHCH 89
S++A +I+T +QD+F++ + I C+T++ +A FS++ NPN +Y A++ V
Sbjct: 47 SIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNPNVYLYTAMIDGFVSSG 106
Query: 90 RSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQT 149
RS ++ Y +M+ N V+P +Y +S++KAC D + +H V K GF + V
Sbjct: 107 RSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIHAQVLKLGFGSSRSVGL 162
Query: 150 TLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSAT 209
++E Y + GE+ +A ++FDEMP+R+
Sbjct: 163 KMMEIYG-------------------------------KSGELVNAKKMFDEMPDRDHVA 191
Query: 210 WNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGL 269
MI+ Y++ G I+ A LF + KD + WT ++ RNK + LF EM +
Sbjct: 192 ATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENV 251
Query: 270 APDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLL 329
+ +E V+SAC+ LGAL LG+ VH ++ L ++G++LI+MY++CG I+ +
Sbjct: 252 SANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARR 311
Query: 330 VFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGF 389
VF ++ K++ +N+MI GLA HG + EA+ F +M +G RPN VT V++L AC+H G
Sbjct: 312 VFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGL 371
Query: 390 VEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALL 449
++ G F SM + + P IEHYGC+VDLL + G +E+A I + EP+ + G LL
Sbjct: 372 LDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLL 431
Query: 450 SGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEK 509
S CK+H N+E+ + L E +SG Y LL N+YA +WKE ++IR +M+D G+EK
Sbjct: 432 SACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEK 491
Query: 510 TCPGSSWVEINQKIHLFAASDNYH 533
PG S +E++ +IH F D H
Sbjct: 492 E-PGCSTIEVDNQIHEFLVGDIAH 514
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 96/212 (45%), Gaps = 32/212 (15%)
Query: 275 AMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL 334
+ +V+ +C ++ + +H ++ D ++ LI + + S+D + VF +
Sbjct: 31 TLISVLRSCKNIAHV---PSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 335 QVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC-------THA 387
N++ + +MIDG + G + + + ++ M + P+ SVL AC HA
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDLKVCREIHA 147
Query: 388 GFVEEG----RSRFVSMIEDYCIS-------------PGIEHYGC--MVDLLSKGGLIED 428
++ G RS + M+E Y S P +H M++ S+ G I++
Sbjct: 148 QVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKE 207
Query: 429 ALEMIRGMTFEPNSFIWGALLSGCKLHRNLEI 460
ALE+ + + + ++ W A++ G L RN E+
Sbjct: 208 ALELFQDVKIK-DTVCWTAMIDG--LVRNKEM 236
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 331 bits (849), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 180/535 (33%), Positives = 289/535 (54%), Gaps = 21/535 (3%)
Query: 34 VYANMIKTNANQDS-FLMNQFIAACT---TINLATHAFSHMDNPNALVYNALLRTCVHCH 89
V ++ + ++QD F +N+ IA C I+ A F M N + +N+LL +
Sbjct: 47 VRSDYLTKPSDQDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLL---IGIS 103
Query: 90 RSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQT 149
+ + ++ P ++S++ +M S + V+ + FD F
Sbjct: 104 KDPSRMMEAHQLFDEIPEPDTFSYN--------IMLSCYVRNVNFEKAQSFFDRMPFKDA 155
Query: 150 ----TLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER 205
T++ Y+ G AR++F M E++ +W MIS ++ CG+++ A+ F P R
Sbjct: 156 ASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVR 215
Query: 206 NSATWNAMIDGYAKSGNIECAEILFNRMPC-KDVISWTTLMTCYSRNKRFGDVVTLFHEM 264
W AMI GY K+ +E AE +F M K++++W +++ Y N R D + LF M
Sbjct: 216 GVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAM 275
Query: 265 VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSI 324
+ G+ P+ +++ + C+ L AL LG+++H + + DV +SLI MY KCG +
Sbjct: 276 LEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGEL 335
Query: 325 DRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
+ +F ++ K++ WN+MI G A HG A +AL +F EM IRP+ +TFV+VL AC
Sbjct: 336 GDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLAC 395
Query: 385 THAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFI 444
HAG V G + F SM+ DY + P +HY CMVDLL + G +E+AL++IR M F P++ +
Sbjct: 396 NHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAV 455
Query: 445 WGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKD 504
+G LL C++H+N+E+A A + L+ L N+ Y L N+YA NRW++V+++R MK+
Sbjct: 456 FGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKE 515
Query: 505 LGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPEL 559
V K PG SW+EI K+H F +SD H ++ AGY PEL
Sbjct: 516 SNVVKV-PGYSWIEIRNKVHHFRSSDRIHPELDSIHKKLKELEKKMKLAGYKPEL 569
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 331 bits (848), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 178/569 (31%), Positives = 299/569 (52%), Gaps = 43/569 (7%)
Query: 31 LESVYANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDNPNALVYNALLRTCVH 87
L+ ++ ++I + + D+FL+N + ++ FSH PN +YN+L+ V+
Sbjct: 29 LKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVN 88
Query: 88 CHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
H H+ L ++ + ++G+ ++F ++KACT G +H V K GF+ V
Sbjct: 89 NHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAA 148
Query: 148 QTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE--- 204
T+L+ YS G DA K+FDE+P+R WT + S + G A LF +M E
Sbjct: 149 MTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGV 208
Query: 205 ------------------------------------RNSATWNAMIDGYAKSGNIECAEI 228
+NS +++ YAK G +E A
Sbjct: 209 KPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 229 LFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA 288
+F+ M KD+++W+T++ Y+ N + + LF +M+ L PD+ ++ +S+CA LGA
Sbjct: 269 VFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGA 328
Query: 289 LGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDG 348
L LG+ + + F ++++ ++LIDMYAKCG++ R VF +++ K++ N+ I G
Sbjct: 329 LDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISG 388
Query: 349 LATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISP 408
LA +G+ K + +F + E+ GI P+G TF+ +L C HAG +++G F ++ Y +
Sbjct: 389 LAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKR 448
Query: 409 GIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNL 468
+EHYGCMVDL + G+++DA +I M PN+ +WGALLSGC+L ++ ++A ++ L
Sbjct: 449 TVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKEL 508
Query: 469 MILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAA 528
+ LEP N+G Y L N+Y+ RW E +++R M G++K PG SW+E+ K+H F A
Sbjct: 509 IALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKI-PGYSWIELEGKVHEFLA 567
Query: 529 SDNYHTSYGHVNXXXXXXXXXXXXAGYVP 557
D H + G+VP
Sbjct: 568 DDKSHPLSDKIYAKLEDLGNEMRLMGFVP 596
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 330 bits (845), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 189/576 (32%), Positives = 293/576 (50%), Gaps = 81/576 (14%)
Query: 31 LESVYANMIKTNANQDSFLMNQFI--------------AACTTINLATHAFSHMDNPNAL 76
+ ++ +IKT ++S L + + A C +FS + +
Sbjct: 28 VNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHVCSFSFGEVEDPF 87
Query: 77 VYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHV 136
++NA++++ H QAL ML NGV +S S ++KAC+ L G +HG +
Sbjct: 88 LWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRLGFVKGGMQIHGFL 147
Query: 137 WKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCG------ 190
K G + +F+Q L+ Y G G +R++FD MP+RD+ ++ +MI +V+CG
Sbjct: 148 KKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGLIVSAR 207
Query: 191 ----------------------------EVDSAARLFDEMPERNSATWNAMIDGYAKSGN 222
VD A++LF +MPE++ +WN+MIDGY K G
Sbjct: 208 ELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGYVKHGR 267
Query: 223 IECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRG-------------- 268
IE A+ LF+ MP +DV++W T++ Y++ TLF +M R
Sbjct: 268 IEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQN 327
Query: 269 ------------------LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI 310
L PD+ + V+ A A LG L ++H Y++ F L +
Sbjct: 328 KYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKL 387
Query: 311 GSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGI 370
G +LIDMY+KCGSI ++LVF ++ K++ WN+MI GLA HG + A M ++ER +
Sbjct: 388 GVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSL 447
Query: 371 RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL 430
+P+ +TFV VL AC+H+G V+EG F M + I P ++HYGCMVD+LS+ G IE A
Sbjct: 448 KPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIELAK 507
Query: 431 EMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVN 490
+I M EPN IW L+ C H+ E + ++L++ N Y LL NMYA
Sbjct: 508 NLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYASFG 567
Query: 491 RWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLF 526
WK+V ++R MK+ +EK PG SW+E++ ++H F
Sbjct: 568 MWKDVRRVRTMMKERKIEKI-PGCSWIELDGRVHEF 602
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 329 bits (843), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 174/499 (34%), Positives = 276/499 (55%), Gaps = 38/499 (7%)
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDS 126
F +P+ ++ A + T QA YV++L + + P ++FSSL+K+C+ +
Sbjct: 87 FHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----T 142
Query: 127 AAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAH 186
+GK +H HV K G +V T LV+ Y+
Sbjct: 143 KSGKLIHTHVLKFGLGIDPYVATGLVDVYA------------------------------ 172
Query: 187 VRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMT 246
+ G+V SA ++FD MPER+ + AMI YAK GN+E A LF+ M +D++SW ++
Sbjct: 173 -KGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMID 231
Query: 247 CYSRNKRFGDVVTLFHEMVSRGLA-PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFG 305
Y+++ D + LF ++++ G PDE+ + +SAC+ +GAL G+ +H ++ +
Sbjct: 232 GYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIR 291
Query: 306 LDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM 365
L+V + + LIDMY+KCGS++ ++LVF K++ WN+MI G A HGY+++AL++F+EM
Sbjct: 292 LNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEM 351
Query: 366 ER-KGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGG 424
+ G++P +TF+ L AC HAG V EG F SM ++Y I P IEHYGC+V LL + G
Sbjct: 352 QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAG 411
Query: 425 LIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVN 484
++ A E I+ M + +S +W ++L CKLH + + + L+ L NSG Y LL N
Sbjct: 412 QLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSN 471
Query: 485 MYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXX 544
+YA V ++ V+K+R MK+ G+ K PG S +EI K+H F A D H+ +
Sbjct: 472 IYASVGDYEGVAKVRNLMKEKGIVKE-PGISTIEIENKVHEFRAGDREHSKSKEIYTMLR 530
Query: 545 XXXXXXXXAGYVPELGSIL 563
GYVP ++L
Sbjct: 531 KISERIKSHGYVPNTNTVL 549
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 133/272 (48%), Gaps = 38/272 (13%)
Query: 216 GYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVA 275
YA G I + LF++ D+ +T + S N L+ +++S + P+E
Sbjct: 73 AYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFT 132
Query: 276 MTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSI----------- 324
++++ +C+ GK +H +++ G G+D Y+ + L+D+YAK G +
Sbjct: 133 FSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMP 188
Query: 325 DRSLL--------------------VFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSE 364
+RSL+ +F + +++ WN MIDG A HG+ +AL +F +
Sbjct: 189 ERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQK 248
Query: 365 MERKG-IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKG 423
+ +G +P+ +T V+ L+AC+ G +E GR V ++ I ++ ++D+ SK
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHV-FVKSSRIRLNVKVCTGLIDMYSKC 307
Query: 424 GLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
G +E+A+ ++ T + W A+++G +H
Sbjct: 308 GSLEEAV-LVFNDTPRKDIVAWNAMIAGYAMH 338
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 116/275 (42%), Gaps = 17/275 (6%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVV-PTSYSFSSLVK 118
+ A F M + + +N ++ + AL + K+L G P + + +
Sbjct: 208 VEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 119 ACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA 178
AC+ + G+ +H V +V V T L++ YS G +A VF++ P +D A
Sbjct: 268 ACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVA 327
Query: 179 WTTMISAHVRCGEVDSAARLFDEMP-----ERNSATWNAMIDGYAKSGNIECAEILFNRM 233
W MI+ + G A RLF+EM + T+ + A +G + +F M
Sbjct: 328 WNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESM 387
Query: 234 PCK-----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA 288
+ + + L++ R G + + + + + D V ++V+ +C G
Sbjct: 388 GQEYGIKPKIEHYGCLVSLLGRA---GQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGD 444
Query: 289 LGLGKEVHHYLM-VNGFGLDVYIGSSLIDMYAKCG 322
LGKE+ YL+ +N +Y+ L ++YA G
Sbjct: 445 FVLGKEIAEYLIGLNIKNSGIYV--LLSNIYASVG 477
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 327 bits (839), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/550 (32%), Positives = 302/550 (54%), Gaps = 39/550 (7%)
Query: 20 IKRCSKREK-KTLESVYANM----IKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPN 74
I C+K E +T E VYA + I+ N S L++ ++ C I++A F N
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK-CNAIDVAKRLFDEYGASN 301
Query: 75 ALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHG 134
+ NA+ V + +AL + M+ +GV P S S + +C+ L + GK+ HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 135 HVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDS 194
+V + GF++ + L++ Y A ++FD M + W ++++ +V GEVD+
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 195 AARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRF 254
A F+ MPE+N +WN +I G + G++ F
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQ-GSL------------------------------F 450
Query: 255 GDVVTLFHEMVSR-GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSS 313
+ + +F M S+ G+ D V M ++ SAC HLGAL L K +++Y+ NG LDV +G++
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT 510
Query: 314 LIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
L+DM+++CG + ++ +F L +++ W + I +A G A+ A+++F +M +G++P+
Sbjct: 511 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 374 GVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMI 433
GV FV LTAC+H G V++G+ F SM++ + +SP HYGCMVDLL + GL+E+A+++I
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 434 RGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWK 493
M EPN IW +LL+ C++ N+E+A A + + +L P +G Y LL N+YA RW
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWN 690
Query: 494 EVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXA 553
+++K+R++MK+ G+ K PG+S ++I K H F + D H ++
Sbjct: 691 DMAKVRLSMKEKGLRKP-PGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHL 749
Query: 554 GYVPELGSIL 563
G+VP+L ++L
Sbjct: 750 GHVPDLSNVL 759
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 229/515 (44%), Gaps = 90/515 (17%)
Query: 11 TLKDKILDQIKRCSKREKKTLES---------VYANMIKTNANQDSFLMNQFIA-ACT-- 58
T K +L+Q K C+K +L++ + ++ K + D + + +A +C
Sbjct: 20 TTKPSLLNQSK-CTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELG 78
Query: 59 ---TINLATHAFSHMDN-PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFS 114
+++ A F + ++ +YN+L+R ++A+ +++M+ +G+ P Y+F
Sbjct: 79 TRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFP 138
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
+ AC G +HG + K G+ +FVQ +LV FY+ G ARKVFDEM ER
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 175 DAFAWTTMISAHVRCGEVDSAARLF-----DEMPERNSATW------------------- 210
+ +WT+MI + R A LF DE NS T
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 211 ----------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRF 254
+A++D Y K I+ A+ LF+ ++ + + Y R
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLT 318
Query: 255 GDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSL 314
+ + +F+ M+ G+ PD ++M + IS+C+ L + GK H Y++ NGF I ++L
Sbjct: 319 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 378
Query: 315 IDMYAKC-------------------------------GSIDRSLLVFYKLQVKNLFCWN 343
IDMY KC G +D + F + KN+ WN
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 438
Query: 344 SMIDGLATHGYAKEALKMFSEME-RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
++I GL +EA+++F M+ ++G+ +GVT +S+ +AC H G ++ + + IE
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY-YIE 497
Query: 403 DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT 437
I + +VD+ S+ G E A+ + +T
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 532
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 155/319 (48%), Gaps = 19/319 (5%)
Query: 146 FVQTTLVEFYSMLGLAGDARKVFDEM------PERDAFAWTTMISAHVRC-GEVDSAARL 198
F+ +L+ Y+ GL +A +F M P++ F + A R G L
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGL 159
Query: 199 FDEMP-ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDV 257
+M ++ N+++ YA+ G ++ A +F+ M ++V+SWT+++ Y+R D
Sbjct: 160 IVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDA 219
Query: 258 VTLFHEMV-SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLID 316
V LF MV + P+ V M VISACA L L G++V+ ++ +G ++ + S+L+D
Sbjct: 220 VDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVD 279
Query: 317 MYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVT 376
MY KC +ID + +F + NL N+M G +EAL +F+ M G+RP+ ++
Sbjct: 280 MYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 377 FVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHY----GCMVDLLSKGGLIEDALEM 432
+S +++C+ + G+S Y + G E + ++D+ K + A +
Sbjct: 340 MLSAISSCSQLRNILWGKS-----CHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRI 394
Query: 433 IRGMTFEPNSFIWGALLSG 451
M+ W ++++G
Sbjct: 395 FDRMS-NKTVVTWNSIVAG 412
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 327 bits (838), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 178/550 (32%), Positives = 302/550 (54%), Gaps = 39/550 (7%)
Query: 20 IKRCSKREK-KTLESVYANM----IKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPN 74
I C+K E +T E VYA + I+ N S L++ ++ C I++A F N
Sbjct: 243 ISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMK-CNAIDVAKRLFDEYGASN 301
Query: 75 ALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHG 134
+ NA+ V + +AL + M+ +GV P S S + +C+ L + GK+ HG
Sbjct: 302 LDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHG 361
Query: 135 HVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDS 194
+V + GF++ + L++ Y A ++FD M + W ++++ +V GEVD+
Sbjct: 362 YVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDA 421
Query: 195 AARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRF 254
A F+ MPE+N +WN +I G + G++ F
Sbjct: 422 AWETFETMPEKNIVSWNTIISGLVQ-GSL------------------------------F 450
Query: 255 GDVVTLFHEMVSR-GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSS 313
+ + +F M S+ G+ D V M ++ SAC HLGAL L K +++Y+ NG LDV +G++
Sbjct: 451 EEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTT 510
Query: 314 LIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
L+DM+++CG + ++ +F L +++ W + I +A G A+ A+++F +M +G++P+
Sbjct: 511 LVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPD 570
Query: 374 GVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMI 433
GV FV LTAC+H G V++G+ F SM++ + +SP HYGCMVDLL + GL+E+A+++I
Sbjct: 571 GVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLI 630
Query: 434 RGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWK 493
M EPN IW +LL+ C++ N+E+A A + + +L P +G Y LL N+YA RW
Sbjct: 631 EDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWN 690
Query: 494 EVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXA 553
+++K+R++MK+ G+ K PG+S ++I K H F + D H ++
Sbjct: 691 DMAKVRLSMKEKGLRKP-PGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHL 749
Query: 554 GYVPELGSIL 563
G+VP+L ++L
Sbjct: 750 GHVPDLSNVL 759
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 130/515 (25%), Positives = 229/515 (44%), Gaps = 90/515 (17%)
Query: 11 TLKDKILDQIKRCSKREKKTLES---------VYANMIKTNANQDSFLMNQFIA-ACT-- 58
T K +L+Q K C+K +L++ + ++ K + D + + +A +C
Sbjct: 20 TTKPSLLNQSK-CTKATPSSLKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELG 78
Query: 59 ---TINLATHAFSHMDN-PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFS 114
+++ A F + ++ +YN+L+R ++A+ +++M+ +G+ P Y+F
Sbjct: 79 TRESLSFAKEVFENSESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFP 138
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
+ AC G +HG + K G+ +FVQ +LV FY+ G ARKVFDEM ER
Sbjct: 139 FGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSER 198
Query: 175 DAFAWTTMISAHVRCGEVDSAARLF-----DEMPERNSATW------------------- 210
+ +WT+MI + R A LF DE NS T
Sbjct: 199 NVVSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKV 258
Query: 211 ----------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRF 254
+A++D Y K I+ A+ LF+ ++ + + Y R
Sbjct: 259 YAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLT 318
Query: 255 GDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSL 314
+ + +F+ M+ G+ PD ++M + IS+C+ L + GK H Y++ NGF I ++L
Sbjct: 319 REALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNAL 378
Query: 315 IDMYAKC-------------------------------GSIDRSLLVFYKLQVKNLFCWN 343
IDMY KC G +D + F + KN+ WN
Sbjct: 379 IDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWN 438
Query: 344 SMIDGLATHGYAKEALKMFSEME-RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
++I GL +EA+++F M+ ++G+ +GVT +S+ +AC H G ++ + + IE
Sbjct: 439 TIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY-YIE 497
Query: 403 DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT 437
I + +VD+ S+ G E A+ + +T
Sbjct: 498 KNGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLT 532
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 326 bits (836), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 298/550 (54%), Gaps = 47/550 (8%)
Query: 13 KDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAAC-TTINLATHAFSHMD 71
K +L+ I RCS + + + +I + +D ++N+ + + + A+++ +
Sbjct: 6 KSVLLELISRCSSL--RVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILH 63
Query: 72 NPNALV----YNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSA 127
+ +++ YN LL + C + + Y + NG P ++F + KAC
Sbjct: 64 SIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIR 123
Query: 128 AGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHV 187
GK +HG V K GF ++VQ +LV FY + G + +A KVF EMP RD +WT +I+
Sbjct: 124 EGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFT 183
Query: 188 RCGEVDSAARLFDEMP-ERNSATW-----------------------------------N 211
R G A F +M E N AT+ N
Sbjct: 184 RTGLYKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGN 243
Query: 212 AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM-VSRGLA 270
A+ID Y K + A +F + KD +SW ++++ +R + + LF M S G+
Sbjct: 244 ALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIK 303
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
PD +T+V+SACA LGA+ G+ VH Y++ G D +IG++++DMYAKCG I+ +L +
Sbjct: 304 PDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
F ++ KN+F WN+++ GLA HG+ E+L+ F EM + G +PN VTF++ L AC H G V
Sbjct: 364 FNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLV 423
Query: 391 EEGRSRFVSM-IEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALL 449
+EGR F M +Y + P +EHYGCM+DLL + GL+++ALE+++ M +P+ I GA+L
Sbjct: 424 DEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAIL 483
Query: 450 SGCKLHRNL-EIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVE 508
S CK L E+ + + + +E +SG Y LL N++A RW +V++IR MK G+
Sbjct: 484 SACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGIS 543
Query: 509 KTCPGSSWVE 518
K PGSS++E
Sbjct: 544 KV-PGSSYIE 552
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 325 bits (833), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 159/394 (40%), Positives = 245/394 (62%), Gaps = 3/394 (0%)
Query: 142 DAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDE 201
+ +V + T+++ Y + AR+ FD PERD W TMIS ++ G + A LFD+
Sbjct: 56 EKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQ 115
Query: 202 MPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLF 261
MP R+ +WN +++GYA G++E E +F+ MP ++V SW L+ Y++N R +V+ F
Sbjct: 116 MPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSF 175
Query: 262 HEMVSRG-LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFG-LDVYIGSSLIDMYA 319
MV G + P++ MT V+SACA LGA GK VH Y G+ +DV + ++LIDMY
Sbjct: 176 KRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYG 235
Query: 320 KCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVS 379
KCG+I+ ++ VF ++ ++L WN+MI+GLA HG+ EAL +F EM+ GI P+ VTFV
Sbjct: 236 KCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVG 295
Query: 380 VLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE 439
VL AC H G VE+G + F SM D+ I P IEH GC+VDLLS+ G + A+E I M +
Sbjct: 296 VLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVK 355
Query: 440 PNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIR 499
++ IW LL K+++ ++I VA++ L+ LEP N + +L N+Y + R+ + ++++
Sbjct: 356 ADAVIWATLLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLK 415
Query: 500 IAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYH 533
+AM+D G +K G SW+E + + F +S H
Sbjct: 416 VAMRDTGFKKEA-GVSWIETDDGLVKFYSSGEKH 448
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 86/224 (38%), Gaps = 43/224 (19%)
Query: 65 HAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNG-VVPTSYSFSSLVKACTLL 123
F M N +N L++ R + L + +M+ G VVP + + ++ AC L
Sbjct: 142 RVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKL 201
Query: 124 MDSAAGKTVHGHVWKRGFD-AHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
GK VH + G++ V V+ L++ Y G A +VF + RD +W TM
Sbjct: 202 GAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTM 261
Query: 183 ISAHVRCGEVDSAARLFDEMP------------------------ERNSATWNAM----- 213
I+ G A LF EM E A +N+M
Sbjct: 262 INGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFS 321
Query: 214 -----------IDGYAKSGNIECAEILFNRMPCK-DVISWTTLM 245
+D +++G + A N+MP K D + W TL+
Sbjct: 322 IMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLL 365
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 324 bits (831), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 174/545 (31%), Positives = 290/545 (53%), Gaps = 12/545 (2%)
Query: 29 KTLESVYANMI----KTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRT 84
+TL +V++ +I + N++ LM + A+ + A F + N ++ N ++R+
Sbjct: 56 RTLRTVHSRIILEDLRCNSSLGVKLMRAY-ASLKDVASARKVFDEIPERNVIIINVMIRS 114
Query: 85 CVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
V+ + + + M V P Y+F ++KAC+ G+ +HG K G +
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE 204
+FV LV Y G +AR V DEM RD +W +++ + + D A + EM
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMES 234
Query: 205 ----RNSATWNAMIDGYAKSG--NIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVV 258
++ T +++ + + N+ + +F +M K ++SW ++ Y +N + V
Sbjct: 235 VKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAV 294
Query: 259 TLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMY 318
L+ M + G PD V++T+V+ AC AL LGK++H Y+ ++ + ++LIDMY
Sbjct: 295 ELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMY 354
Query: 319 AKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFV 378
AKCG ++++ VF ++ +++ W +MI G +A+ +FS+++ G+ P+ + FV
Sbjct: 355 AKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFV 414
Query: 379 SVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF 438
+ L AC+HAG +EEGRS F M + Y I+P +EH CMVDLL + G +++A I+ M+
Sbjct: 415 TTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSM 474
Query: 439 EPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKI 498
EPN +WGALL C++H + +I +A L L P SGYY LL N+YA+ RW+EV+ I
Sbjct: 475 EPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNI 534
Query: 499 RIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPE 558
R MK G++K PG+S VE+N+ IH F D H + GYVP+
Sbjct: 535 RNIMKSKGLKKN-PGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPD 593
Query: 559 LGSIL 563
S L
Sbjct: 594 SESAL 598
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 322 bits (825), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/542 (31%), Positives = 291/542 (53%), Gaps = 39/542 (7%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFIAACTT-----INLATHAFSHMDNPNALVYNALLR 83
K + ++A + +D L+ F+ A ++ A + P N+++R
Sbjct: 20 KEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMIR 79
Query: 84 TCVHCHRSHQALACYVKMLRNG--VVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGF 141
++ Y ++L +G + P +Y+ + LV+ACT L G VHG +RGF
Sbjct: 80 AHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGF 139
Query: 142 DAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDE 201
D VQT L+ Y+ LG +DS ++F+
Sbjct: 140 DNDPHVQTGLISLYAELGC-------------------------------LDSCHKVFNS 168
Query: 202 MPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLF 261
+P + AM+ A+ G++ A LF MP +D I+W +++ Y++ + + +F
Sbjct: 169 IPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVF 228
Query: 262 HEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKC 321
H M G+ + VAM +V+SAC LGAL G+ H Y+ N + V + ++L+D+YAKC
Sbjct: 229 HLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKC 288
Query: 322 GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
G +++++ VF+ ++ KN++ W+S ++GLA +G+ ++ L++FS M++ G+ PN VTFVSVL
Sbjct: 289 GDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVL 348
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPN 441
C+ GFV+EG+ F SM ++ I P +EHYGC+VDL ++ G +EDA+ +I+ M +P+
Sbjct: 349 RGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPH 408
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIA 501
+ +W +LL ++++NLE+ +A + ++ LE +N G Y LL N+YA+ N W VS +R +
Sbjct: 409 AAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQS 468
Query: 502 MKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELGS 561
MK GV K PG S +E+N ++H F D H Y ++ AGY +
Sbjct: 469 MKSKGVRKQ-PGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTP 527
Query: 562 IL 563
++
Sbjct: 528 VM 529
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/570 (30%), Positives = 303/570 (53%), Gaps = 46/570 (8%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIA---ACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
E ++ ++K+ + + + N +A ++ A F M + + +N+++ V
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
+ + L+ +V+ML +G+ + S+ C + G+ VH K F
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSA 208
TL++ YS G A+ VF EM +R ++T+MI+ + R G A +LF+EM E +
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 209 T--------------------------W-------------NAMIDGYAKSGNIECAEIL 229
W NA++D YAK G+++ AE++
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELV 454
Query: 230 FNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVS-RGLAPDEVAMTTVISACAHLGA 288
F+ M KD+ISW T++ YS+N + ++LF+ ++ + +PDE + V+ ACA L A
Sbjct: 455 FSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSA 514
Query: 289 LGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDG 348
G+E+H Y+M NG+ D ++ +SL+DMYAKCG++ + ++F + K+L W MI G
Sbjct: 515 FDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAG 574
Query: 349 LATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYC-IS 407
HG+ KEA+ +F++M + GI + ++FVS+L AC+H+G V+EG RF +++ C I
Sbjct: 575 YGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGW-RFFNIMRHECKIE 633
Query: 408 PGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQN 467
P +EHY C+VD+L++ G + A I M P++ IWGALL GC++H ++++A +
Sbjct: 634 PTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEK 693
Query: 468 LMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFA 527
+ LEP N+GYY L+ N+YAE +W++V ++R + G+ K PG SW+EI ++++F
Sbjct: 694 VFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKN-PGCSWIEIKGRVNIFV 752
Query: 528 ASDNYHTSYGHVNXXXXXXXXXXXXAGYVP 557
A D+ + ++ GY P
Sbjct: 753 AGDSSNPETENIEAFLRKVRARMIEEGYSP 782
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 114/378 (30%), Positives = 186/378 (49%), Gaps = 40/378 (10%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSL 116
C + A+ F + AL +N L+ ++ + KM+ +GV SY+FS +
Sbjct: 142 CGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV 201
Query: 117 VKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDA 176
K+ + L G+ +HG + K GF V +LV FY ARKVFDEM ERD
Sbjct: 202 SKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDV 261
Query: 177 FAWTTMISAHVRCGEVDSAARLFDEMP--------------------------------- 203
+W ++I+ +V G + +F +M
Sbjct: 262 ISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSI 321
Query: 204 ------ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDV 257
R N ++D Y+K G+++ A+ +F M + V+S+T+++ Y+R G+
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEA 381
Query: 258 VTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDM 317
V LF EM G++PD +T V++ CA L GK VH ++ N G D+++ ++L+DM
Sbjct: 382 VKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDM 441
Query: 318 YAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFS-EMERKGIRPNGVT 376
YAKCGS+ + LVF +++VK++ WN++I G + + YA EAL +F+ +E K P+ T
Sbjct: 442 YAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERT 501
Query: 377 FVSVLTACTHAGFVEEGR 394
VL AC ++GR
Sbjct: 502 VACVLPACASLSAFDKGR 519
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 171/380 (45%), Gaps = 43/380 (11%)
Query: 112 SFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEM 171
+ S+++ C GK V + GF + + L Y+ G +A +VFDE+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLFDEM----------------------------- 202
A W +++ + G+ + LF +M
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 203 -----------PERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRN 251
ERNS N+++ Y K+ ++ A +F+ M +DVISW +++ Y N
Sbjct: 216 QLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 252 KRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG 311
+++F +M+ G+ D + +V + CA + LG+ VH + F +
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
++L+DMY+KCG +D + VF ++ +++ + SMI G A G A EA+K+F EME +GI
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALE 431
P+ T +VL C ++EG+ R I++ + I ++D+ +K G +++A E
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGK-RVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA-E 452
Query: 432 MIRGMTFEPNSFIWGALLSG 451
++ + W ++ G
Sbjct: 453 LVFSEMRVKDIISWNTIIGG 472
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 79/165 (47%), Gaps = 12/165 (7%)
Query: 228 ILFNRMPCKDVISWTTLMTCYSRN--------KRFGDVVTLFHEM----VSRGLAPDEVA 275
++FNR + V +T + R+ +RF + L + + VS D
Sbjct: 37 VIFNRASLRTVSDCVDSITTFDRSVTDANTQLRRFCESGNLENAVKLLCVSGKWDIDPRT 96
Query: 276 MTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ 335
+ +V+ CA +L GKEV +++ NGF +D +GS L MY CG + + VF +++
Sbjct: 97 LCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVK 156
Query: 336 VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSV 380
++ WN +++ LA G ++ +F +M G+ + TF V
Sbjct: 157 IEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCV 201
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 319 bits (817), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 176/549 (32%), Positives = 298/549 (54%), Gaps = 53/549 (9%)
Query: 2 LNFQHCKIHTLKDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAAC---T 58
L F+H K+ L+ CS L+ ++ +++T+ D F+ ++ +A C +
Sbjct: 9 LRFKHPKLALLQS--------CSSFSD--LKIIHGFLLRTHLISDVFVASRLLALCVDDS 58
Query: 59 TINLATH-------AFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSY 111
T N T+ FS + NPN V+N L+R +A Y +ML++ + P +
Sbjct: 59 TFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNI 118
Query: 112 SFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEM 171
+F L+KA + + G+ H + + GF V+V+ +LV Y+
Sbjct: 119 TFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYA--------------- 163
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFN 231
CG + +A R+F +M R+ +W +M+ GY K G +E A +F+
Sbjct: 164 ----------------NCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFD 207
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
MP +++ +W+ ++ Y++N F + LF M G+ +E M +VIS+CAHLGAL
Sbjct: 208 EMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF 267
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
G+ + Y++ + +++ +G++L+DM+ +CG I++++ VF L + W+S+I GLA
Sbjct: 268 GERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAV 327
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIE 411
HG+A +A+ FS+M G P VTF +VL+AC+H G VE+G + +M +D+ I P +E
Sbjct: 328 HGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLE 387
Query: 412 HYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMIL 471
HYGC+VD+L + G + +A I M +PN+ I GALL CK+++N E+A L+ +
Sbjct: 388 HYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKV 447
Query: 472 EPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDN 531
+P +SGYY LL N+YA +W ++ +R MK+ V+K PG S +EI+ KI+ F D+
Sbjct: 448 KPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKP-PGWSLIEIDGKINKFTMGDD 506
Query: 532 Y-HTSYGHV 539
H G +
Sbjct: 507 QKHPEMGKI 515
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 318 bits (815), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 171/544 (31%), Positives = 288/544 (52%), Gaps = 41/544 (7%)
Query: 55 AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFS 114
+ C + A+ F M + + +N ++ V ++L + +M+ +GV+P + +FS
Sbjct: 285 SKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFS 344
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
SL+ + + + K +H ++ + +F+ + L++ Y A+ +F +
Sbjct: 345 SLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSV 404
Query: 175 DAFAWTTMISAHVRCG-EVDS------------------------------AARLFDEMP 203
D +T MIS ++ G +DS A +L E+
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 204 --------ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFG 255
+ A+ID YAK G + A +F R+ +D++SW +++T +++
Sbjct: 465 GFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPS 524
Query: 256 DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLI 315
+ +F +M G+ D V+++ +SACA+L + GK +H +++ + DVY S+LI
Sbjct: 525 AAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLI 584
Query: 316 DMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM-ERKGIRPNG 374
DMYAKCG++ ++ VF ++ KN+ WNS+I HG K++L +F EM E+ GIRP+
Sbjct: 585 DMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQ 644
Query: 375 VTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIR 434
+TF+ ++++C H G V+EG F SM EDY I P EHY C+VDL + G + +A E ++
Sbjct: 645 ITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVK 704
Query: 435 GMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKE 494
M F P++ +WG LL C+LH+N+E+A VA LM L+PSNSGYY L+ N +A W+
Sbjct: 705 SMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWES 764
Query: 495 VSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAG 554
V+K+R MK+ V+K PG SW+EIN++ HLF + D H H+ G
Sbjct: 765 VTKVRSLMKEREVQKI-PGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEG 823
Query: 555 YVPE 558
Y+P+
Sbjct: 824 YIPQ 827
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/474 (23%), Positives = 220/474 (46%), Gaps = 54/474 (11%)
Query: 32 ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALV--YNALLRTCV 86
+ V+A +I + + DS+ + + A C + + F +D + + +N+++ + V
Sbjct: 55 KQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFV 114
Query: 87 HCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVF 146
+QALA Y KML GV P +F LVKAC L + + V G D + F
Sbjct: 115 RNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEF 174
Query: 147 VQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP--- 203
V ++L++ Y G K+FD + ++D W M++ + +CG +DS + F M
Sbjct: 175 VASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQ 234
Query: 204 -ERNSATW-----------------------------------NAMIDGYAKSGNIECAE 227
N+ T+ N+++ Y+K G + A
Sbjct: 235 ISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDAS 294
Query: 228 ILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLG 287
LF M D ++W +++ Y ++ + +T F+EM+S G+ PD + ++++ + +
Sbjct: 295 KLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFE 354
Query: 288 ALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMID 347
L K++H Y+M + LD+++ S+LID Y KC + + +F + ++ + +MI
Sbjct: 355 NLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMIS 414
Query: 348 GLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCIS 407
G +G ++L+MF + + I PN +T VS+L ++ GR + + I
Sbjct: 415 GYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRE-----LHGFIIK 469
Query: 408 PGIE---HYGC-MVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRN 457
G + + GC ++D+ +K G + A E+ ++ + + W ++++ C N
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS-KRDIVSWNSMITRCAQSDN 522
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 110/458 (24%), Positives = 213/458 (46%), Gaps = 53/458 (11%)
Query: 51 NQFIAACTT--------INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKML 102
N+F+A+ I++ + F + + +++N +L C + + M
Sbjct: 172 NEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMR 231
Query: 103 RNGVVPTSYSFSSLVKACT--LLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGL 160
+ + P + +F ++ C LL+D G +HG V G D ++ +L+ YS G
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLID--LGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGR 289
Query: 161 AGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------PE---------- 204
DA K+F M D W MIS +V+ G ++ + F EM P+
Sbjct: 290 FDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS 349
Query: 205 ------------------RNSATWN-----AMIDGYAKSGNIECAEILFNRMPCKDVISW 241
R+S + + A+ID Y K + A+ +F++ DV+ +
Sbjct: 350 VSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVF 409
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
T +++ Y N + D + +F +V ++P+E+ + +++ L AL LG+E+H +++
Sbjct: 410 TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIK 469
Query: 302 NGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKM 361
GF IG ++IDMYAKCG ++ + +F +L +++ WNSMI A A+ +
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 362 FSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLS 421
F +M GI + V+ + L+AC + G++ MI+ + ++ + ++D+ +
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYA 588
Query: 422 KGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLE 459
K G ++ A+ + + M E N W ++++ C H L+
Sbjct: 589 KCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNHGKLK 625
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 180/431 (41%), Gaps = 76/431 (17%)
Query: 90 RSHQALACYVKML--RNG------VVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGF 141
R A+A Y K L RN +P S L++AC+ GK VH +
Sbjct: 9 RFAPAIAPYKKSLPLRNSSRFLEETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSI 66
Query: 142 DAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAF--AWTTMISAHVRCGEVDSAARLF 199
+ ++ Y+M G D K+F + R + W ++IS+ VR G ++ A +
Sbjct: 67 SGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFY 126
Query: 200 DEM------PER---------------------------------NSATWNAMIDGYAKS 220
+M P+ N +++I Y +
Sbjct: 127 FKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEY 186
Query: 221 GNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVI 280
G I+ LF+R+ KD + W ++ Y++ V+ F M ++P+ V V+
Sbjct: 187 GKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVL 246
Query: 281 SACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLF 340
S CA + LG ++H ++V+G + I +SL+ MY+KCG D + +F + +
Sbjct: 247 SVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTV 306
Query: 341 CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSM 400
WN MI G G +E+L F EM G+ P+ +TF S+L + S+F ++
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSV----------SKFENL 356
Query: 401 IEDYC--ISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSF---------IWGALL 449
+YC I I + +D+ LI DA RG++ N F ++ A++
Sbjct: 357 --EYCKQIHCYIMRHSISLDIFLTSALI-DAYFKCRGVSMAQNIFSQCNSVDVVVFTAMI 413
Query: 450 SGCKLHRNLEI 460
SG LH L I
Sbjct: 414 SG-YLHNGLYI 423
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 318 bits (815), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 166/496 (33%), Positives = 267/496 (53%), Gaps = 39/496 (7%)
Query: 104 NGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGD 163
+G+ S ++S L+K C G + H++ G +F+ L+ Y L D
Sbjct: 55 HGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLND 114
Query: 164 ARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLF------------------------ 199
A ++FD+MP+R+ +WTTMISA+ +C A L
Sbjct: 115 AHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNG 174
Query: 200 ------------DEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTC 247
E E + +A+ID +AK G E A +F+ M D I W +++
Sbjct: 175 MSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGG 234
Query: 248 YSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLD 307
+++N R + LF M G ++ +T+V+ AC L L LG + H +++ + D
Sbjct: 235 FAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIV--KYDQD 292
Query: 308 VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMER 367
+ + ++L+DMY KCGS++ +L VF +++ +++ W++MI GLA +GY++EALK+F M+
Sbjct: 293 LILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKS 352
Query: 368 KGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIE 427
G +PN +T V VL AC+HAG +E+G F SM + Y I P EHYGCM+DLL K G ++
Sbjct: 353 SGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLD 412
Query: 428 DALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYA 487
DA++++ M EP++ W LL C++ RN+ +A A + ++ L+P ++G Y+LL N+YA
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYA 472
Query: 488 EVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXX 547
+W V +IR M+D G++K PG SW+E+N++IH F DN H V+
Sbjct: 473 NSQKWDSVEEIRTRMRDRGIKKE-PGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLI 531
Query: 548 XXXXXAGYVPELGSIL 563
GYVPE +L
Sbjct: 532 HRLTGIGYVPETNFVL 547
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 318 bits (814), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 184/556 (33%), Positives = 288/556 (51%), Gaps = 60/556 (10%)
Query: 16 ILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTT------INLATHAFSH 69
IL Q++ C R L ++ MIK++ ++ +++ I CTT ++ A F
Sbjct: 9 ILSQLENC--RSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFES 66
Query: 70 MDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAG 129
+D P+ ++N+++R + +AL Y +MLR G P ++F ++KAC+ L D G
Sbjct: 67 IDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 130 KTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRC 189
VHG V K GF+ +++V T L+ Y G +VF+++P+ + AW ++IS V
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 190 GEVDSAARLFDEMPERN----------------------SATW----------------- 210
A F EM + W
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSK 246
Query: 211 --------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFH 262
++ID YAK G++ A LF+ MP + ++SW +++T YS+N + + +F
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFL 306
Query: 263 EMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG 322
+M+ G+APD+V +VI A G LG+ +H Y+ GF D I +L++MYAK G
Sbjct: 307 DMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTG 366
Query: 323 SIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG-IRPNGVTFVSVL 381
+ + F L+ K+ W +I GLA+HG+ EAL +F M+ KG P+G+T++ VL
Sbjct: 367 DAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVL 426
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPN 441
AC+H G VEEG+ F M + + + P +EHYGCMVD+LS+ G E+A +++ M +PN
Sbjct: 427 YACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPN 486
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMILEPSN--SGYYSLLVNMYAEVNRWKEVSKIR 499
IWGALL+GC +H NLE+ + M+ EP SG Y LL N+YA+ RW +V IR
Sbjct: 487 VNIWGALLNGCDIHENLELTDRIRS--MVAEPEELGSGIYVLLSNIYAKAGRWADVKLIR 544
Query: 500 IAMKDLGVEKTCPGSS 515
+MK V+K SS
Sbjct: 545 ESMKSKRVDKVLGHSS 560
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 318 bits (814), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 193/627 (30%), Positives = 314/627 (50%), Gaps = 77/627 (12%)
Query: 11 TLKDKILDQIKRCSKREKKTLESVYANMIKTNANQ--DSFLMNQFIAACTTINL-ATHAF 67
T + IL+++ C + ++ ++A++++T N +SFL N +++ + A + F
Sbjct: 10 TAANTILEKLSFC--KSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVF 67
Query: 68 SHMDNP-NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDS 126
S + +P ++V+N LR + Y ++ G +SF ++KA + +
Sbjct: 68 SSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSAL 127
Query: 127 AAGKTVHGHVWKRGFDAHVFVQT-------------------------------TLVEFY 155
G +HG +K FV+T T++E Y
Sbjct: 128 FEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERY 187
Query: 156 SMLGLAGDARKVFDEMPER---------------------------------------DA 176
GL +A K+F+EM + D
Sbjct: 188 CRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDT 247
Query: 177 FAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCK 236
T +++ + G +D A F +M RN AM+ GY+K G ++ A+++F++ K
Sbjct: 248 HLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 237 DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVH 296
D++ WTT+++ Y + + + +F EM G+ PD V+M +VISACA+LG L K VH
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 297 HYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAK 356
+ VNG ++ I ++LI+MYAKCG +D + VF K+ +N+ W+SMI+ L+ HG A
Sbjct: 368 SCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEAS 427
Query: 357 EALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCM 416
+AL +F+ M+++ + PN VTFV VL C+H+G VEEG+ F SM ++Y I+P +EHYGCM
Sbjct: 428 DALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCM 487
Query: 417 VDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNS 476
VDL + L+ +ALE+I M N IWG+L+S C++H LE+ A + ++ LEP +
Sbjct: 488 VDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHD 547
Query: 477 GYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSY 536
G L+ N+YA RW++V IR M++ V K G S ++ N K H F D H
Sbjct: 548 GALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKE-KGLSRIDQNGKSHEFLIGDKRHKQS 606
Query: 537 GHVNXXXXXXXXXXXXAGYVPELGSIL 563
+ AGYVP+ GS+L
Sbjct: 607 NEIYAKLDEVVSKLKLAGYVPDCGSVL 633
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/495 (33%), Positives = 268/495 (54%), Gaps = 5/495 (1%)
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDS 126
F + + N V NAL+R R ++ ++ MLR GV P +F ++K+ + L
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 127 AAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTM 182
G+ +H K D FV+ +LV+ Y+ G A +VF+E P+R W +
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVL 202
Query: 183 ISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWT 242
I+ + R ++ A LF MPERNS +W+ +I GY SG + A+ LF MP K+V+SWT
Sbjct: 203 INGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWT 262
Query: 243 TLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVN 302
TL+ +S+ + ++ + EM+ +GL P+E + V+SAC+ GALG G +H Y++ N
Sbjct: 263 TLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN 322
Query: 303 GFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMF 362
G LD IG++L+DMYAKCG +D + VF + K++ W +MI G A HG +A++ F
Sbjct: 323 GIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCF 382
Query: 363 SEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSK 422
+M G +P+ V F++VLTAC ++ V+ G + F SM DY I P ++HY +VDLL +
Sbjct: 383 RQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGR 442
Query: 423 GGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLL 482
G + +A E++ M P+ W AL CK H+ A QNL+ L+P G Y L
Sbjct: 443 AGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFL 502
Query: 483 VNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXX 542
+A ++V K R++++ E++ G S++E++ +++ F+A D H +
Sbjct: 503 DKTHASKGNIQDVEKRRLSLQKRIKERSL-GWSYIELDGQLNKFSAGDYSHKLTQEIGLK 561
Query: 543 XXXXXXXXXXAGYVP 557
GY P
Sbjct: 562 LDEIISLAIQKGYNP 576
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 113/235 (48%), Gaps = 14/235 (5%)
Query: 267 RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDR 326
R +PDE ++I AC +L + VH ++ G L + + L+ + S D
Sbjct: 23 RQASPDESHFISLIHACKDTASL---RHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDY 78
Query: 327 SLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
SL +F + +N F N++I GL + + +++ F M R G++P+ +TF VL + +
Sbjct: 79 SLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSK 138
Query: 387 AGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIR---GMTFEPNSF 443
GF GR+ + ++++ +VD+ +K G ++ A ++ + +
Sbjct: 139 LGFRWLGRALHAATLKNFVDCDSFVRLS-LVDMYAKTGQLKHAFQVFEESPDRIKKESIL 197
Query: 444 IWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMY---AEVNRWKEV 495
IW L++G +++ +A ++ + NSG +S L+ Y E+NR K++
Sbjct: 198 IWNVLINGYCRAKDMHMATTLFRS---MPERNSGSWSTLIKGYVDSGELNRAKQL 249
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 1/180 (0%)
Query: 23 CSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALL 82
C ++ +++ +M + N+ S L+ ++ + +N A F M N + + L+
Sbjct: 207 CRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDS-GELNRAKQLFELMPEKNVVSWTTLI 265
Query: 83 RTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFD 142
A++ Y +ML G+ P Y+ ++++ AC+ +G +HG++ G
Sbjct: 266 NGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIK 325
Query: 143 AHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM 202
+ T LV+ Y+ G A VF M +D +WT MI G A + F +M
Sbjct: 326 LDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQM 385
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 175/579 (30%), Positives = 296/579 (51%), Gaps = 43/579 (7%)
Query: 27 EKKTLESVYANMIKTNANQDSFLMN---QFIAACTTINLATHAFSHMDNPNALVYNALLR 83
E + + ++ ++K+ + D F M A C +N A F M + + +N ++
Sbjct: 150 ELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVA 209
Query: 84 TCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDA 143
+ AL M + P+ + S++ A + L + GK +HG+ + GFD+
Sbjct: 210 GYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDS 269
Query: 144 HVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM- 202
V + T LV+ Y+ G AR++FD M ER+ +W +MI A+V+ A +F +M
Sbjct: 270 LVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKML 329
Query: 203 -----P---------------------------------ERNSATWNAMIDGYAKSGNIE 224
P +RN + N++I Y K ++
Sbjct: 330 DEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVD 389
Query: 225 CAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACA 284
A +F ++ + ++SW ++ +++N R D + F +M SR + PD +VI+A A
Sbjct: 390 TAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIA 449
Query: 285 HLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNS 344
L K +H +M + +V++ ++L+DMYAKCG+I + L+F + +++ WN+
Sbjct: 450 ELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNA 509
Query: 345 MIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDY 404
MIDG THG+ K AL++F EM++ I+PNGVTF+SV++AC+H+G VE G F M E+Y
Sbjct: 510 MIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENY 569
Query: 405 CISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVA 464
I ++HYG MVDLL + G + +A + I M +P ++GA+L C++H+N+ A A
Sbjct: 570 SIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKA 629
Query: 465 VQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIH 524
+ L L P + GY+ LL N+Y + W++V ++R++M G+ KT PG S VEI ++H
Sbjct: 630 AERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKT-PGCSMVEIKNEVH 688
Query: 525 LFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELGSIL 563
F + H + AGYVP+ +L
Sbjct: 689 SFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL 727
Score = 201 bits (512), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 133/478 (27%), Positives = 226/478 (47%), Gaps = 46/478 (9%)
Query: 20 IKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAA-CT--TINLATHAFSHMDNPNAL 76
++RCS K L + + K Q+ F + ++ C +++ A F +D+ +
Sbjct: 44 LERCSSL--KELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNV 101
Query: 77 VYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHV 136
+Y+ +L+ +AL +V+M + V P Y+F+ L+K C + GK +HG +
Sbjct: 102 LYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLL 161
Query: 137 WKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAA 196
K GF +F T L Y+ +ARKVFD MPERD +W T+++ + + G A
Sbjct: 162 VKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMAL 221
Query: 197 RLFDEMPERN---------------SA------------------------TWNAMIDGY 217
+ M E N SA A++D Y
Sbjct: 222 EMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMY 281
Query: 218 AKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMT 277
AK G++E A LF+ M ++V+SW +++ Y +N+ + + +F +M+ G+ P +V++
Sbjct: 282 AKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVM 341
Query: 278 TVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK 337
+ ACA LG L G+ +H + G +V + +SLI MY KC +D + +F KLQ +
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 338 NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRF 397
L WN+MI G A +G +AL FS+M + ++P+ T+VSV+TA +
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK-WI 460
Query: 398 VSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
++ C+ + +VD+ +K G I A +I M E + W A++ G H
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTH 517
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 145/307 (47%), Gaps = 41/307 (13%)
Query: 167 VFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECA 226
VF ++ F T ++S R G VD AAR+F+ + + + ++ M+ G+AK +++ A
Sbjct: 60 VFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSDLDKA 119
Query: 227 EILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
F RM R+ DV P T ++ C
Sbjct: 120 LQFFVRM-------------------RYDDV------------EPVVYNFTYLLKVCGDE 148
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMI 346
L +GKE+H L+ +GF LD++ + L +MYAKC ++ + VF ++ ++L WN+++
Sbjct: 149 AELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIV 208
Query: 347 DGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCI 406
G + +G A+ AL+M M + ++P+ +T VSVL A + + G+ I Y +
Sbjct: 209 AGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE-----IHGYAM 263
Query: 407 SPGIEHY----GCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIAN 462
G + +VD+ +K G +E A ++ GM E N W +++ + N + A
Sbjct: 264 RSGFDSLVNISTALVDMYAKCGSLETARQLFDGM-LERNVVSWNSMIDAYVQNENPKEAM 322
Query: 463 VAVQNLM 469
+ Q ++
Sbjct: 323 LIFQKML 329
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 181/524 (34%), Positives = 272/524 (51%), Gaps = 26/524 (4%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVK- 118
I+ A F M N + + AL++ VH + A + + KM V + ++
Sbjct: 95 IDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQD 154
Query: 119 -----ACTLLM------DSAAGKTVHG-----------HVWKRGFDAHVFVQTTLVEFYS 156
AC L + A +HG ++ + V TT+V Y
Sbjct: 155 GRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYG 214
Query: 157 MLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDG 216
DARK+FD MPE+ +WT+M+ +V+ G ++ A LF+ MP + NAMI G
Sbjct: 215 QNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISG 274
Query: 217 YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAM 276
+ G I A +F+ M ++ SW T++ + RN + + LF M +G+ P +
Sbjct: 275 LGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTL 334
Query: 277 TTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV 336
+++S CA L +L GK+VH L+ F +DVY+ S L+ MY KCG + +S L+F +
Sbjct: 335 ISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPS 394
Query: 337 KNLFCWNSMIDGLATHGYAKEALKMFSEMERKG-IRPNGVTFVSVLTACTHAGFVEEGRS 395
K++ WNS+I G A+HG +EALK+F EM G +PN VTFV+ L+AC++AG VEEG
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLK 454
Query: 396 RFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
+ SM + + P HY CMVD+L + G +A+EMI MT EP++ +WG+LL C+ H
Sbjct: 455 IYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTH 514
Query: 456 RNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSS 515
L++A + L+ +EP NSG Y LL NMYA RW +V+++R MK V K+ PG S
Sbjct: 515 SQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKS-PGCS 573
Query: 516 WVEINQKIHLFAASD-NYHTSYGHVNXXXXXXXXXXXXAGYVPE 558
W E+ K+H F N H + AGY P+
Sbjct: 574 WTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPD 617
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 189/431 (43%), Gaps = 102/431 (23%)
Query: 160 LAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAK 219
+ DARK+FDEMP+R+ +W ++S +++ GE+D A ++FD MPERN +W A++ GY
Sbjct: 63 MPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVH 122
Query: 220 SGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTV 279
+G ++ AE LF +MP K+ +SWT ++ + ++ R D L+ EM+ D +A T++
Sbjct: 123 NGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMIP---DKDNIARTSM 178
Query: 280 ISACAHLGALGLGKEVHHYL----------MVNGFGLDVYIG-----------------S 312
I G + +E+ + MV G+G + + +
Sbjct: 179 IHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWT 238
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT--------------------- 351
S++ Y + G I+ + +F + VK + N+MI GL
Sbjct: 239 SMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDAS 298
Query: 352 ----------HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMI 401
+G+ EAL +F M+++G+RP T +S+L+ C + G+ ++
Sbjct: 299 WQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLV 358
Query: 402 E------------------------------DYCISPGIEHYGCMVDLLSKGGLIEDAL- 430
D S I + ++ + GL E+AL
Sbjct: 359 RCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALK 418
Query: 431 ---EMIRGMTFEPNSFIWGALLSGCK----LHRNLEIANVAVQNLMILEPSNSGYYSLLV 483
EM + +PN + A LS C + L+I +++++ ++P + +Y+ +V
Sbjct: 419 VFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE-SMESVFGVKPI-TAHYACMV 476
Query: 484 NMYAEVNRWKE 494
+M R+ E
Sbjct: 477 DMLGRAGRFNE 487
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 156/357 (43%), Gaps = 52/357 (14%)
Query: 156 SMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMID 215
S +G +ARK+FD + +W +M++ + A +LFDEMP+RN +WN ++
Sbjct: 28 SRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVS 87
Query: 216 GYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVA 275
GY K+G I+ A +F+ MP ++V+SWT L+ Y N + +LF +M +
Sbjct: 88 GYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKN------- 140
Query: 276 MTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ 335
+V +M+ GF D G ID + ++ +
Sbjct: 141 ------------------KVSWTVMLIGFLQD--------------GRIDDACKLYEMIP 168
Query: 336 VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS 395
K+ SMI GL G EA ++F EM + + +T+ +++T V++ R
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSV----ITWTTMVTGYGQNNRVDDARK 224
Query: 396 RFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
F M E +S + M+ + G IEDA E+ M +P A++SG L
Sbjct: 225 IFDVMPEKTEVS-----WTSMLMGYVQNGRIEDAEELFEVMPVKP-VIACNAMISG--LG 276
Query: 456 RNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCP 512
+ EIA A + ++ N + ++ ++ E + I M+ GV T P
Sbjct: 277 QKGEIAK-ARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFP 332
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 315 bits (808), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/494 (33%), Positives = 278/494 (56%), Gaps = 37/494 (7%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNG-VVPTSYSFSSLVKACTLLMDSAAGKTV 132
++ + N++++ + + + A Y + + P +++F++L K+C+L M G +
Sbjct: 41 DSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQL 100
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEV 192
H +W+ GF A ++V T +V+ Y+ G G AR FDEMP R +WT +IS ++RCGE+
Sbjct: 101 HSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGEL 160
Query: 193 DSAARLFDEMPE-RNSATWNAMIDGYAKSGN----------------------------- 222
D A++LFD+MP ++ +NAM+DG+ KSG+
Sbjct: 161 DLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNI 220
Query: 223 --IECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM-VSRGLAPDEVAMTTV 279
I+ A LF+ MP ++++SW T++ Y +NK+ + + LF EM + L PD+V + +V
Sbjct: 221 KDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSV 280
Query: 280 ISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL 339
+ A + GAL LG+ H ++ V + ++++DMY+KCG I+++ +F ++ K +
Sbjct: 281 LPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQV 340
Query: 340 FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVS 399
WN+MI G A +G A+ AL +F M + +P+ +T ++V+TAC H G VEEGR F
Sbjct: 341 ASWNAMIHGYALNGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHV 399
Query: 400 MIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLE 459
M E ++ IEHYGCMVDLL + G +++A ++I M FEPN I + LS C ++++E
Sbjct: 400 MRE-MGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIE 458
Query: 460 IANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEI 519
A ++ + LEP N G Y LL N+YA RW + ++ M+ +K G S +EI
Sbjct: 459 RAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEV-GCSLIEI 517
Query: 520 NQKIHLFAASDNYH 533
N + F + D H
Sbjct: 518 NYIVSEFISGDTTH 531
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 146/358 (40%), Gaps = 53/358 (14%)
Query: 162 GDARKVFDEMPER-DAFAWTTMISAHVRCGEVDSAARLFDEMPER--------------- 205
G ARK+FD+ P+R D+F +MI A++ + + L+ ++ +
Sbjct: 27 GYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTK 86
Query: 206 --------------NSATW-----------NAMIDGYAKSGNIECAEILFNRMPCKDVIS 240
+S W ++D YAK G + CA F+ MP + +S
Sbjct: 87 SCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPHRSEVS 146
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVS-RGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
WT L++ Y R LF +M + + M + + A L E+ H
Sbjct: 147 WTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRLFDEMTHKT 206
Query: 300 MVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEAL 359
++ +++I Y ID + +F + +NL WN+MI G + +E +
Sbjct: 207 VIT--------WTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGI 258
Query: 360 KMFSEME-RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVD 418
++F EM+ + P+ VT +SVL A + G + G ++ + ++ ++D
Sbjct: 259 RLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHC-FVQRKKLDKKVKVCTAILD 317
Query: 419 LLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNS 476
+ SK G IE A + M E W A++ G L+ N A +MI E +
Sbjct: 318 MYSKCGEIEKAKRIFDEMP-EKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKPDE 374
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 178/546 (32%), Positives = 287/546 (52%), Gaps = 45/546 (8%)
Query: 2 LNFQHCKIHTLKDKILDQIKRC---SKREKKTLESVYANMIKTNANQDSFLMNQFIAACT 58
++ H + +++L+Q R L+ V + MI + + FL + + CT
Sbjct: 8 FSYLHAPSSHMAEQLLNQFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCT 67
Query: 59 ----TINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALA-CYVKMLRNGVVPTS--Y 111
++ A F PN +Y A+L H + A + +++ N VP +
Sbjct: 68 LRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSSSLPLHASSAFSFFRLMVNRSVPRPNHF 127
Query: 112 SFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEM 171
+ ++K+ L + + VH H++K GF +V VQT L+ Y+
Sbjct: 128 IYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYA--------------- 172
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFN 231
+ A +LFDEM ERN +W AM+ GYA+SG+I A LF
Sbjct: 173 ---------------SSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFE 217
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSR-GLAPDEVAMTTVISACAHLGALG 290
MP +DV SW ++ ++N F + V+LF M++ + P+EV + V+SACA G L
Sbjct: 218 DMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQ 277
Query: 291 LGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLA 350
L K +H + DV++ +SL+D+Y KCG+++ + VF K+L WNSMI+ A
Sbjct: 278 LAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFA 337
Query: 351 THGYAKEALKMFSEMER---KGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCIS 407
HG ++EA+ +F EM + I+P+ +TF+ +L ACTH G V +GR F M + I
Sbjct: 338 LHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIE 397
Query: 408 PGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQN 467
P IEHYGC++DLL + G ++ALE++ M + + IWG+LL+ CK+H +L++A VAV+N
Sbjct: 398 PRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKN 457
Query: 468 LMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFA 527
L+ L P+N GY +++ N+Y E+ W+E + R +K K PG S +EI+ ++H F
Sbjct: 458 LVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKP-PGWSRIEIDNEVHQFY 516
Query: 528 ASDNYH 533
+ D H
Sbjct: 517 SLDKSH 522
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 166/504 (32%), Positives = 278/504 (55%), Gaps = 32/504 (6%)
Query: 31 LESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHR 90
++ ++A+ ++T ++ L+ + + + A F H N +YN L++ H+
Sbjct: 4 IKQLHAHCLRTGVDETKDLLQRLLLIPNLV-YARKLFDHHQNSCTFLYNKLIQAYYVHHQ 62
Query: 91 SHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTT 150
H+++ Y + +G+ P+ ++F+ + A + + +H ++ GF++ F TT
Sbjct: 63 PHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTT 122
Query: 151 LVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATW 210
L+ Y+ LG AR+VFDEM +RD W MI+ + R G++ +A LFD MP +N +W
Sbjct: 123 LITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSW 182
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
+I G++++GN A +F C ++K +
Sbjct: 183 TTVISGFSQNGNYSEALKMF---------------LCMEKDK---------------SVK 212
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
P+ + + +V+ ACA+LG L +G+ + Y NGF ++Y+ ++ I+MY+KCG ID + +
Sbjct: 213 PNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRL 272
Query: 331 FYKL-QVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGF 389
F +L +NL WNSMI LATHG EAL +F++M R+G +P+ VTFV +L AC H G
Sbjct: 273 FEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGM 332
Query: 390 VEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALL 449
V +G+ F SM E + ISP +EHYGCM+DLL + G +++A ++I+ M +P++ +WG LL
Sbjct: 333 VVKGQELFKSMEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLL 392
Query: 450 SGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEK 509
C H N+EIA +A + L LEP+N G ++ N+YA +W V ++R MK + K
Sbjct: 393 GACSFHGNVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTK 452
Query: 510 TCPGSSWVEINQKIHLFAASDNYH 533
S +VE+ +H F D H
Sbjct: 453 AAGYSYFVEVGVDVHKFTVEDKSH 476
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 314 bits (805), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 172/527 (32%), Positives = 284/527 (53%), Gaps = 16/527 (3%)
Query: 51 NQFIAACTTINLATHAFSHMD-------NPNALVYNALLRTCVHCHRSHQALACYVKMLR 103
N +++ T + A +D P+ + +N+LL S A+A +M
Sbjct: 159 NSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQI 218
Query: 104 NGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGD 163
G+ P++ S SSL++A GK +HG++ + V+V+TTL++ Y G
Sbjct: 219 AGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPY 278
Query: 164 ARKVFDEMPERDAFAWTTMISA-HVRCGEVDSAA---RLFDEMPERNSATWNAMIDGYAK 219
AR VFD M ++ AW +++S C D+ A R+ E + ++ TWN++ GYA
Sbjct: 279 ARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYAT 338
Query: 220 SGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVA 275
G E A + +M K +V+SWT + + S+N F + + +F +M G+ P+
Sbjct: 339 LGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAAT 398
Query: 276 MTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ 335
M+T++ L L GKEVH + + D Y+ ++L+DMY K G + ++ +F+ ++
Sbjct: 399 MSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIK 458
Query: 336 VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS 395
K+L WN M+ G A G +E + FS M G+ P+ +TF SVL+ C ++G V+EG
Sbjct: 459 NKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK 518
Query: 396 RFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
F M Y I P IEH CMVDLL + G +++A + I+ M+ +P++ IWGA LS CK+H
Sbjct: 519 YFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIH 578
Query: 456 RNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSS 515
R+LE+A +A + L +LEP NS Y +++N+Y+ +NRW++V +IR M++ V + S
Sbjct: 579 RDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRV-RVQDLWS 637
Query: 516 WVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELGSI 562
W++I+Q +H+F A H G + +GYVP+ I
Sbjct: 638 WIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTSCI 684
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 211/447 (47%), Gaps = 46/447 (10%)
Query: 53 FIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYS 112
F C ++ A F M + L +N ++ + +A+ + +M +G +
Sbjct: 32 FYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDST 91
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP 172
L++ C+ A G+ +HG+V + G +++V + +L+ YS G +RKVF+ M
Sbjct: 92 MVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEI 228
+R+ +W +++S++ + G VD A L DEM + + TWN+++ GYA G +
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSK---- 207
Query: 229 LFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA 288
D + + M GL P ++++++ A A G
Sbjct: 208 ---------------------------DAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGH 240
Query: 289 LGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDG 348
L LGK +H Y++ N DVY+ ++LIDMY K G + + +VF + KN+ WNS++ G
Sbjct: 241 LKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSG 300
Query: 349 LATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISP 408
L+ K+A + ME++GI+P+ +T+ S+ + G E+ + +++ ++P
Sbjct: 301 LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALD-VIGKMKEKGVAP 359
Query: 409 GIEHYGCMVDLLSKGGLIEDALEMIRGMTFE---PNSFIWGALLS--GC--KLHRNLEIA 461
+ + + SK G +AL++ M E PN+ LL GC LH E+
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419
Query: 462 NVAVQNLMILEPSNSGYYSLLVNMYAE 488
++ +I + + + LV+MY +
Sbjct: 420 GFCLRKNLICDAYVA---TALVDMYGK 443
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 107/239 (44%), Gaps = 31/239 (12%)
Query: 154 FYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAM 213
Y LGL + + D + + + RC + A +LFDEMP+R+ WN +
Sbjct: 1 MYRFLGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEI 60
Query: 214 IDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDE 273
+ +SGN E A V LF EM G +
Sbjct: 61 VMVNLRSGNWEKA-------------------------------VELFREMQFSGAKAYD 89
Query: 274 VAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYK 333
M ++ C++ G+++H Y++ G +V + +SLI MY++ G ++ S VF
Sbjct: 90 STMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNS 149
Query: 334 LQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEE 392
++ +NL WNS++ GY +A+ + EME G++P+ VT+ S+L+ G ++
Sbjct: 150 MKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKD 208
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 313 bits (803), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 178/563 (31%), Positives = 284/563 (50%), Gaps = 55/563 (9%)
Query: 37 NMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALA 96
N++ N ++ N+ I A + F M N + + A+++ + +A +
Sbjct: 78 NVVSWNGLVSGYIKNRMIVE------ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAES 131
Query: 97 CYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFD----AHVFVQTTLV 152
+ +M V + F L+ + D A ++ +D V T ++
Sbjct: 132 LFWRMPERNEVSWTVMFGGLIDDGRI--DKA----------RKLYDMMPVKDVVASTNMI 179
Query: 153 EFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNA 212
G +AR +FDEM ER+ WTTMI+ + + VD A +LF+ MPE+ +W +
Sbjct: 180 GGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTS 239
Query: 213 MIDGYAKSGNIECAEILFNRMPCKDVI-------------------------------SW 241
M+ GY SG IE AE F MP K VI +W
Sbjct: 240 MLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATW 299
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
++ Y R + + LF +M +G+ P ++ +++S CA L +L G++VH +L+
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Query: 302 NGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKM 361
F DVY+ S L+ MY KCG + ++ LVF + K++ WNS+I G A+HG +EALK+
Sbjct: 360 CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKI 419
Query: 362 FSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLS 421
F EM G PN VT +++LTAC++AG +EEG F SM +C++P +EHY C VD+L
Sbjct: 420 FHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLG 479
Query: 422 KGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSL 481
+ G ++ A+E+I MT +P++ +WGALL CK H L++A VA + L EP N+G Y L
Sbjct: 480 RAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVL 539
Query: 482 LVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASD-NYHTSYGHVN 540
L ++ A ++W +V+ +R M+ V K PG SW+E+ +K+H+F H +
Sbjct: 540 LSSINASRSKWGDVAVVRKNMRTNNVSK-FPGCSWIEVGKKVHMFTRGGIKNHPEQAMIL 598
Query: 541 XXXXXXXXXXXXAGYVPELGSIL 563
AGY P+ +L
Sbjct: 599 MMLEKTDGLLREAGYSPDCSHVL 621
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 122/245 (49%), Gaps = 12/245 (4%)
Query: 156 SMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMID 215
S +G +ARK FD + + +W +++S + G A +LFDEM ERN +WN ++
Sbjct: 28 SRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVS 87
Query: 216 GYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVA 275
GY K+ I A +F MP ++V+SWT ++ Y + G+ +LF M R +EV+
Sbjct: 88 GYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPER----NEVS 143
Query: 276 MTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ 335
T + G + ++++ + V DV +++I + G +D + L+F +++
Sbjct: 144 WTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMR 199
Query: 336 VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS 395
+N+ W +MI G + A K+F M K V++ S+L T +G +E+
Sbjct: 200 ERNVVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEE 255
Query: 396 RFVSM 400
F M
Sbjct: 256 FFEVM 260
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 132/304 (43%), Gaps = 62/304 (20%)
Query: 150 TLVEFYSMLGLAGDARKVFDE-------------------------------MPERDAFA 178
++V Y GL +AR++FDE MPER+ +
Sbjct: 53 SIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVS 112
Query: 179 WTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDV 238
WT M+ +++ G V A LF MPERN +W M G G I+ A L++ MP KDV
Sbjct: 113 WTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDV 172
Query: 239 ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK----- 293
++ T ++ R R + +F EM R + V TT+I+ + + +
Sbjct: 173 VASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEV 228
Query: 294 -----EVHHYLMVNGFGLD-----------------VYIGSSLIDMYAKCGSIDRSLLVF 331
EV M+ G+ L V +++I + + G I ++ VF
Sbjct: 229 MPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVF 288
Query: 332 YKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVE 391
++ ++ W MI G+ EAL +F++M+++G+RP+ + +S+L+ C ++
Sbjct: 289 DLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQ 348
Query: 392 EGRS 395
GR
Sbjct: 349 YGRQ 352
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 118/259 (45%), Gaps = 19/259 (7%)
Query: 183 ISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWT 242
IS R G+++ A + FD + + +WN+++ GY +G + A LF+ M ++V+SW
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 243 TLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL-MV 301
L++ Y +N+ + +F M R + V+ T ++ G +G + + +
Sbjct: 84 GLVSGYIKNRMIVEARNVFELMPERNV----VSWTAMVKGYMQEGMVGEAESLFWRMPER 139
Query: 302 NGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKM 361
N V G + D G ID++ ++ + VK++ +MI GL G EA +
Sbjct: 140 NEVSWTVMFGGLIDD-----GRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLI 194
Query: 362 FSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLS 421
F EM + N VT+ +++T V+ R F M E +S + M+ +
Sbjct: 195 FDEMRER----NVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVS-----WTSMLLGYT 245
Query: 422 KGGLIEDALEMIRGMTFEP 440
G IEDA E M +P
Sbjct: 246 LSGRIEDAEEFFEVMPMKP 264
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 184/607 (30%), Positives = 297/607 (48%), Gaps = 81/607 (13%)
Query: 2 LNFQHCKIHTLKDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTT-- 59
+N+ L + +L +++C + L+ + A MI D F ++ IA C
Sbjct: 42 INWNSTHSFVLHNPLLSLLEKC--KLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSE 99
Query: 60 ---INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVV---PTSYSF 113
++ + ++NPN +N +R ++ Y +MLR+G P +++
Sbjct: 100 SRYLDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTY 159
Query: 114 SSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE 173
L K C L S+ G + GHV K + V + ++ G +ARKVFDE P
Sbjct: 160 PVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPV 219
Query: 174 RDAFAWTTMISAHVRCGEVDSA----------------------------------ARLF 199
RD +W +I+ + + GE + A + F
Sbjct: 220 RDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEF 279
Query: 200 DEMPERNSATW-----NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSR---- 250
E + N NA++D ++K G+I A +F+ + + ++SWTT+++ Y+R
Sbjct: 280 YEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLL 339
Query: 251 ---------------------------NKRFGDVVTLFHEMVSRGLAPDEVAMTTVISAC 283
KR D + LF EM + PDE+ M +SAC
Sbjct: 340 DVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSAC 399
Query: 284 AHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWN 343
+ LGAL +G +H Y+ L+V +G+SL+DMYAKCG+I +L VF+ +Q +N +
Sbjct: 400 SQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYT 459
Query: 344 SMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
++I GLA HG A A+ F+EM GI P+ +TF+ +L+AC H G ++ GR F M
Sbjct: 460 AIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSR 519
Query: 404 YCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANV 463
+ ++P ++HY MVDLL + GL+E+A ++ M E ++ +WGALL GC++H N+E+
Sbjct: 520 FNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEK 579
Query: 464 AVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKI 523
A + L+ L+PS+SG Y LL MY E N W++ + R M + GVEK PG S +E+N +
Sbjct: 580 AAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARRMMNERGVEKI-PGCSSIEVNGIV 638
Query: 524 HLFAASD 530
F D
Sbjct: 639 CEFIVRD 645
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 311 bits (797), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 176/571 (30%), Positives = 299/571 (52%), Gaps = 48/571 (8%)
Query: 3 NFQHCKIHTLKDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINL 62
F+ + L+ L +K+C + L + A M+ + + +FL+ + + N
Sbjct: 27 QFEEARRGDLERDFLFLLKKCISVNQ--LRQIQAQMLLHSVEKPNFLIPKAVE-LGDFNY 83
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQA-LACYVKMLRNGVVPTSYSFSSLVKACT 121
++ FS + PN +N ++R + H+A L+ Y +M +G+ P ++++ + AC
Sbjct: 84 SSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACA 143
Query: 122 LLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTT 181
L + G++VH ++K G + V + +L+ Y+ G G ARK+FDE+ ERD +W +
Sbjct: 144 KLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNS 203
Query: 182 MISAHVRCGEVDSAARLFDEMPER------------------------------------ 205
MIS + G A LF +M E
Sbjct: 204 MISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKK 263
Query: 206 ---NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFH 262
++ + +I Y K G+++ A +FN+M KD ++WT ++T YS+N + + LF
Sbjct: 264 IGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFF 323
Query: 263 EMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG 322
EM G++PD ++TV+SAC +GAL LGK++ + ++Y+ + L+DMY KCG
Sbjct: 324 EMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCG 383
Query: 323 SIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLT 382
++ +L VF + VKN WN+MI A G+AKEAL +F +R + P+ +TF+ VL+
Sbjct: 384 RVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLF---DRMSVPPSDITFIGVLS 440
Query: 383 ACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNS 442
AC HAG V +G F M + + P IEHY ++DLLS+ G++++A E + +P+
Sbjct: 441 ACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDE 500
Query: 443 FIWGALLSGCKLHRNLEIANVAVQNLMIL-EPSNSGYYSLLVNMYAEVNRWKEVSKIRIA 501
+ A+L C +++ I A++ LM + E N+G Y + N+ A++ W E +K+R
Sbjct: 501 IMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRAL 560
Query: 502 MKDLGVEKTCPGSSWVEINQKIHLFAASDNY 532
M+D GV KT PG SW+EI ++ F A +Y
Sbjct: 561 MRDRGVVKT-PGCSWIEIEGELMEFLAGSDY 590
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 173/534 (32%), Positives = 286/534 (53%), Gaps = 48/534 (8%)
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGV-VPTSYSFSSLVKACTLLMD 125
F M + +NA++ + +AL L NG+ S + SL+ ACT D
Sbjct: 208 FDEMPVRDMGSWNAMISGYCQSGNAKEALT-----LSNGLRAMDSVTVVSLLSACTEAGD 262
Query: 126 SAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISA 185
G T+H + K G ++ +FV L++ Y+ G D +KVFD M RD +W ++I A
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 186 HVRCGEVDSAARLFDEM------PE----------------------------------R 205
+ + A LF EM P+
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE 382
Query: 206 NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
+ NA++ YAK G ++ A +FN +P DVISW T+++ Y++N + + +++ M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 266 SRG-LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSI 324
G +A ++ +V+ AC+ GAL G ++H L+ NG LDV++ +SL DMY KCG +
Sbjct: 443 EEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRL 502
Query: 325 DRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
+ +L +FY++ N WN++I HG+ ++A+ +F EM +G++P+ +TFV++L+AC
Sbjct: 503 EDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSAC 562
Query: 385 THAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFI 444
+H+G V+EG+ F M DY I+P ++HYGCMVD+ + G +E AL+ I+ M+ +P++ I
Sbjct: 563 SHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASI 622
Query: 445 WGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKD 504
WGALLS C++H N+++ +A ++L +EP + GY+ LL NMYA +W+ V +IR
Sbjct: 623 WGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHG 682
Query: 505 LGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPE 558
G+ KT PG S +E++ K+ +F + H Y + GYVP+
Sbjct: 683 KGLRKT-PGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPD 735
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 229/463 (49%), Gaps = 45/463 (9%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACY-VKMLRNGVVPTSYSFSSLVK 118
+ LA H F H+ N + +N ++ S + + C+ + ML +G+ P +F S++K
Sbjct: 102 VALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLK 161
Query: 119 ACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA 178
AC ++D G +H K GF V+V +L+ YS G+AR +FDEMP RD +
Sbjct: 162 ACRTVID---GNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGS 218
Query: 179 WTTMISAHVRCGEVDSAARLFDEMPERNSATW---------------------------- 210
W MIS + + G A L + + +S T
Sbjct: 219 WNAMISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGL 278
Query: 211 -------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHE 263
N +ID YA+ G + + +F+RM +D+ISW +++ Y N++ ++LF E
Sbjct: 279 ESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE 338
Query: 264 MVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL-DVYIGSSLIDMYAKCG 322
M + PD + + ++ S + LG + + V + + G+ L D+ IG++++ MYAK G
Sbjct: 339 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 398
Query: 323 SIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG-IRPNGVTFVSVL 381
+D + VF L ++ WN++I G A +G+A EA++M++ ME +G I N T+VSVL
Sbjct: 399 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 458
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPN 441
AC+ AG + +G ++++ + + + D+ K G +EDAL + + N
Sbjct: 459 PACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQIP-RVN 516
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMI--LEPSNSGYYSLL 482
S W L++ H + E A + + ++ ++P + + +LL
Sbjct: 517 SVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLL 559
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 166/383 (43%), Gaps = 63/383 (16%)
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
+L + CT L + K +H + +V + LV Y LG AR FD + R
Sbjct: 59 TLFRYCTNLQ---SAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWN------------AMIDG------ 216
D +AW MIS + R G R F + T + +IDG
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNKIHCL 175
Query: 217 -------------------YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDV 257
Y++ + A ILF+ MP +D+ SW +++ Y ++ +
Sbjct: 176 ALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEA 235
Query: 258 VTLFHEMVSRGL-APDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLID 316
+TL S GL A D V + +++SAC G G +H Y + +G ++++ + LID
Sbjct: 236 LTL-----SNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLID 290
Query: 317 MYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVT 376
+YA+ G + VF ++ V++L WNS+I + A+ +F EM I+P+ +T
Sbjct: 291 LYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLT 350
Query: 377 FVSVLTACTHAGFVEEGRS------RFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL 430
+S+ + + G + RS R +ED I + V + +K GL++ A
Sbjct: 351 LISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAV------VVMYAKLGLVDSAR 404
Query: 431 EMIRGMTFEPNSFI--WGALLSG 451
+ + PN+ + W ++SG
Sbjct: 405 AVFNWL---PNTDVISWNTIISG 424
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 136/279 (48%), Gaps = 24/279 (8%)
Query: 189 CGEVDSA----ARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTL 244
C + SA ARL +N +++ Y GN+ A F+ + +DV +W +
Sbjct: 64 CTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNRDVYAWNLM 123
Query: 245 MTCYSRNKRFGDVVTLFHE-MVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNG 303
++ Y R +V+ F M+S GL PD +V+ AC + G ++H + G
Sbjct: 124 ISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALKFG 180
Query: 304 FGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFS 363
F DVY+ +SLI +Y++ ++ + ++F ++ V+++ WN+MI G G AKEAL +
Sbjct: 181 FMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL-- 238
Query: 364 EMERKGIRP-NGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH----YGCMVD 418
G+R + VT VS+L+ACT AG G + I Y I G+E ++D
Sbjct: 239 ---SNGLRAMDSVTVVSLLSACTEAGDFNRGVT-----IHSYSIKHGLESELFVSNKLID 290
Query: 419 LLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRN 457
L ++ G + D ++ M + + W +++ +L+
Sbjct: 291 LYAEFGRLRDCQKVFDRM-YVRDLISWNSIIKAYELNEQ 328
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/517 (33%), Positives = 279/517 (53%), Gaps = 38/517 (7%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFIAAC----TTINLATHAFSHMDNPNALVYNALLRT 84
+ L+ ++A++IKT D+ ++ +A C + +N A F+ +++ N V+N ++R
Sbjct: 39 RELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRG 98
Query: 85 CVHCHRSHQALACYVKML--RNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFD 142
A++ ++ ML V P ++ S+ KA L + G+ +HG V K G
Sbjct: 99 FSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGL- 157
Query: 143 AHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM 202
E D+F TM+ +V CG + A R+F M
Sbjct: 158 ------------------------------EDDSFIRNTMLHMYVTCGCLIEAWRIFLGM 187
Query: 203 PERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFH 262
+ WN+MI G+AK G I+ A+ LF+ MP ++ +SW ++++ + RN RF D + +F
Sbjct: 188 IGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFR 247
Query: 263 EMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG 322
EM + + PD M ++++ACA+LGA G+ +H Y++ N F L+ + ++LIDMY KCG
Sbjct: 248 EMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCG 307
Query: 323 SIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLT 382
I+ L VF K L CWNSMI GLA +G+ + A+ +FSE+ER G+ P+ V+F+ VLT
Sbjct: 308 CIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLT 367
Query: 383 ACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNS 442
AC H+G V F M E Y I P I+HY MV++L GL+E+A +I+ M E ++
Sbjct: 368 ACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDT 427
Query: 443 FIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAM 502
IW +LLS C+ N+E+A A + L L+P + Y LL N YA ++E + R+ M
Sbjct: 428 VIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLM 487
Query: 503 KDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHV 539
K+ +EK G S +E++ ++H F + H +
Sbjct: 488 KERQMEKEV-GCSSIEVDFEVHEFISCGGTHPKSAEI 523
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 153/387 (39%), Positives = 237/387 (61%), Gaps = 3/387 (0%)
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEV 192
HG ++ F +V ++++ Y +G AR +FD+M +RD +W TMI +V +
Sbjct: 269 HGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRM 328
Query: 193 DSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
+ A LF EMP R++ +WN M+ GYA GN+E A F + P K +SW +++ Y +NK
Sbjct: 329 EDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNK 388
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
+ + V LF M G PD +T+++SA L L LG ++H ++V DV + +
Sbjct: 389 DYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQ-IVVKTVIPDVPVHN 447
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
+LI MY++CG I S +F ++++K + WN+MI G A HG A EAL +F M+ GI
Sbjct: 448 ALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIY 507
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALE 431
P+ +TFVSVL AC HAG V+E +++FVSM+ Y I P +EHY +V++ S G E+A+
Sbjct: 508 PSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMY 567
Query: 432 MIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNR 491
+I M FEP+ +WGALL C+++ N+ +A+VA + + LEP +S Y LL NMYA++
Sbjct: 568 IITSMPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGL 627
Query: 492 WKEVSKIRIAMKDLGVEKTCPGSSWVE 518
W E S++R+ M+ ++K GSSWV+
Sbjct: 628 WDEASQVRMNMESKRIKKE-RGSSWVD 653
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 181/408 (44%), Gaps = 67/408 (16%)
Query: 150 TLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEV---DSAARLFDEMPERN 206
T++ Y ARK+FD MP+RD W TMIS +V CG + + A +LFDEMP R+
Sbjct: 76 TMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRD 135
Query: 207 SATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVS 266
S +WN MI GYAK+ I A +LF +MP ++ +SW+ ++T + +N V LF +M
Sbjct: 136 SFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPV 195
Query: 267 RGLAP---------DEVAMTTVISACAHLGALGLGKE--VHHY-LMVNGFGL-------- 306
+ +P ++ G+L G+E V+ Y ++ G+G
Sbjct: 196 KDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAAR 255
Query: 307 ------------------------DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCW 342
+V +S+I Y K G + + L+F +++ ++ W
Sbjct: 256 CLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISW 315
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
N+MIDG ++A +FSEM + + ++ +++ G VE R F E
Sbjct: 316 NTMIDGYVHVSRMEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPE 371
Query: 403 DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE---PNSFIWGALLSG----CKLH 455
+ +S + ++ K ++A+++ M E P+ +LLS L
Sbjct: 372 KHTVS-----WNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLR 426
Query: 456 RNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMK 503
+++ + V+ ++ P ++ L+ MY+ E +I MK
Sbjct: 427 LGMQMHQIVVKTVIPDVP----VHNALITMYSRCGEIMESRRIFDEMK 470
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 196/472 (41%), Gaps = 79/472 (16%)
Query: 41 TNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVK 100
TN + + + +IA I F ++ N + +N ++ V +QA +
Sbjct: 43 TNKELNQMIRSGYIAEARDI------FEKLEARNTVTWNTMISGYVKRREMNQARKLFDV 96
Query: 101 MLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGL 160
M + VV + S V +C + + + + R F T++ Y+
Sbjct: 97 MPKRDVVTWNTMISGYV-SCGGIRFLEEARKLFDEMPSR----DSFSWNTMISGYAKNRR 151
Query: 161 AGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNS------------- 207
G+A +F++MPER+A +W+ MI+ + GEVDSA LF +MP ++S
Sbjct: 152 IGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKN 211
Query: 208 -----ATW-------------------NAMIDGYAKSGNIECAEILFNRMP--------- 234
A W N +I GY + G +E A LF+++P
Sbjct: 212 ERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGG 271
Query: 235 ------CKDVISWTTLMTCYSRNKRFGDVVT---LFHEMVSRGLAPDEVAMTTVISACAH 285
CK+V+SW +++ Y + GDVV+ LF +M R D ++ T+I H
Sbjct: 272 EFRERFCKNVVSWNSMIKAY---LKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVH 324
Query: 286 LGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSM 345
+ + E L D + + ++ YA G+++ + F K K+ WNS+
Sbjct: 325 VSRM----EDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSI 380
Query: 346 IDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYC 405
I + KEA+ +F M +G +P+ T S+L+A T G V + I
Sbjct: 381 IAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSAST--GLVNLRLGMQMHQIVVKT 438
Query: 406 ISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRN 457
+ P + + ++ + S+ G I ++ + M + W A++ G H N
Sbjct: 439 VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN 490
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 173/537 (32%), Positives = 281/537 (52%), Gaps = 74/537 (13%)
Query: 68 SHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSA 127
S + P+ L+YN +L++ + LA + ++ G+ P +++ ++K+ L
Sbjct: 4 SLLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVI 63
Query: 128 AGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHV 187
G+ VHG+ K G + +V +L+ Y+ LG KVFDEMP+RD +W +IS++V
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 188 RCGEVDSAARLFDEMPERNSATW------------------------------------- 210
G + A +F M + ++ +
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVR 183
Query: 211 --NAMIDGYAKSG---------------NIEC----------------AEILFNRMPCKD 237
NA++D + K G N++C A +LF R P KD
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKD 243
Query: 238 VISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHH 297
V+ WT +M Y + RF + + LF M + G+ PD + ++++ CA GAL GK +H
Sbjct: 244 VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHG 303
Query: 298 YLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKE 357
Y+ N +D +G++L+DMYAKCG I+ +L VFY+++ ++ W S+I GLA +G +
Sbjct: 304 YINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGR 363
Query: 358 ALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMV 417
AL ++ EME G+R + +TFV+VLTAC H GFV EGR F SM E + + P EH C++
Sbjct: 364 ALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLI 423
Query: 418 DLLSKGGLIEDALEMI---RGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPS 474
DLL + GL+++A E+I RG + E ++ +LLS + + N++IA + L +E S
Sbjct: 424 DLLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVS 483
Query: 475 NSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDN 531
+S ++LL ++YA NRW++V+ +R MKDLG+ K PG S +EI+ H F D+
Sbjct: 484 DSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKF-PGCSSIEIDGVGHEFIVGDD 539
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 166/508 (32%), Positives = 272/508 (53%), Gaps = 36/508 (7%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVV-PTSYSFSSLVK 118
++LA F M + + +N+++ +AL + KMLR+ ++ P ++ +S++
Sbjct: 228 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 287
Query: 119 ACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA 178
AC L GK +H H+ GFD V L+ YS
Sbjct: 288 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYS---------------------- 325
Query: 179 WTTMISAHVRCGEVDSAARLFDEMPERNSAT--WNAMIDGYAKSGNIECAEILFNRMPCK 236
RCG V++A RL ++ ++ + A++DGY K G++ A+ +F + +
Sbjct: 326 ---------RCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDR 376
Query: 237 DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVH 296
DV++WT ++ Y ++ +G+ + LF MV G P+ + ++S + L +L GK++H
Sbjct: 377 DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIH 436
Query: 297 HYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV-KNLFCWNSMIDGLATHGYA 355
+ +G V + ++LI MYAK G+I + F ++ ++ W SMI LA HG+A
Sbjct: 437 GSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHA 496
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGC 415
+EAL++F M +G+RP+ +T+V V +ACTHAG V +GR F M + I P + HY C
Sbjct: 497 EEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYAC 556
Query: 416 MVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSN 475
MVDL + GL+++A E I M EP+ WG+LLS C++H+N+++ VA + L++LEP N
Sbjct: 557 MVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPEN 616
Query: 476 SGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTS 535
SG YS L N+Y+ +W+E +KIR +MKD V+K G SW+E+ K+H+F D H
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKE-QGFSWIEVKHKVHVFGVEDGTHPE 675
Query: 536 YGHVNXXXXXXXXXXXXAGYVPELGSIL 563
+ GYVP+ S+L
Sbjct: 676 KNEIYMTMKKIWDEIKKMGYVPDTASVL 703
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 192/434 (44%), Gaps = 91/434 (20%)
Query: 108 PTSYSFSSLVKACTLLMDSAAGKT--------VHGHVWKRGFDAHVFVQTTLVEFYSMLG 159
P S S+L++ CT L+ + K+ VH V K G V++ L+ YS G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 160 LAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAK 219
A ARK+FDEMP R AF+W T++SA+ + G++DS FD++P+R+S +W MI GY
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 220 SGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTV 279
G ++ + + +MV G+ P + +T V
Sbjct: 124 IG-------------------------------QYHKAIRVMGDMVKEGIEPTQFTLTNV 152
Query: 280 ISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKC------------------ 321
+++ A + GK+VH +++ G +V + +SL++MYAKC
Sbjct: 153 LASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDI 212
Query: 322 -------------GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
G +D ++ F ++ +++ WNSMI G GY AL +FS+M R
Sbjct: 213 SSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRD 272
Query: 369 G-IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYG----CMVDLLSKG 423
+ P+ T SVL+AC + + G+ I + ++ G + G ++ + S+
Sbjct: 273 SLLSPDRFTLASVLSACANLEKLCIGKQ-----IHSHIVTTGFDISGIVLNALISMYSRC 327
Query: 424 GLIEDALEM----------IRGMTFEPNSFI-WGALLSGCKLHRNLEIANVAVQNLMILE 472
G +E A + I G T + +I G + + +L+ +V MI+
Sbjct: 328 GGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVG 387
Query: 473 PSNSGYYSLLVNMY 486
G Y +N++
Sbjct: 388 YEQHGSYGEAINLF 401
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 201/450 (44%), Gaps = 72/450 (16%)
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDS 126
F + +++ + ++ + + H+A+ M++ G+ PT ++ ++++ +
Sbjct: 103 FDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCM 162
Query: 127 AAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAH 186
GK VH + K G +V V +L+ Y+ G A+ VFD M RD +W MI+ H
Sbjct: 163 ETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALH 222
Query: 187 VRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMT 246
++ G++D A F++M ER+ TWN+MI G+ + G A +F++M +D +
Sbjct: 223 MQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKM-LRDSL------- 274
Query: 247 CYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL 306
L+PD + +V+SACA+L L +GK++H +++ GF +
Sbjct: 275 ----------------------LSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDI 312
Query: 307 DVYIGSSLIDMYAKCGSID--RSLL-------------------------------VFYK 333
+ ++LI MY++CG ++ R L+ +F
Sbjct: 313 SGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVS 372
Query: 334 LQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEG 393
L+ +++ W +MI G HG EA+ +F M G RPN T ++L+ + + G
Sbjct: 373 LKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHG 432
Query: 394 RSRFVSMI---EDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLS 450
+ S + E Y +S ++ + +K G I A + E ++ W +++
Sbjct: 433 KQIHGSAVKSGEIYSVSVS----NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMII 488
Query: 451 GCKLHRNLEIANVAVQNLMI--LEPSNSGY 478
H + E A + +++ L P + Y
Sbjct: 489 ALAQHGHAEEALELFETMLMEGLRPDHITY 518
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 305 bits (780), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 168/454 (37%), Positives = 249/454 (54%), Gaps = 36/454 (7%)
Query: 90 RSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMD--SAAGKTVHGHVWKRGFDA-HVF 146
R +A + M GV P +F +L+ C A G +HG+ K G D HV
Sbjct: 51 RLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVM 110
Query: 147 VQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERN 206
V T ++ YS G AR VF D M ++N
Sbjct: 111 VGTAIIGMYSKRGRFKKARLVF-------------------------------DYMEDKN 139
Query: 207 SATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVS 266
S TWN MIDGY +SG ++ A +F++MP +D+ISWT ++ + + + + F EM
Sbjct: 140 SVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQI 199
Query: 267 RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDR 326
G+ PD VA+ ++AC +LGAL G VH Y++ F +V + +SLID+Y +CG ++
Sbjct: 200 SGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEF 259
Query: 327 SLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
+ VFY ++ + + WNS+I G A +G A E+L F +M+ KG +P+ VTF LTAC+H
Sbjct: 260 ARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSH 319
Query: 387 AGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWG 446
G VEEG F M DY ISP IEHYGC+VDL S+ G +EDAL++++ M +PN + G
Sbjct: 320 VGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIG 379
Query: 447 ALLSGCKLH-RNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDL 505
+LL+ C H N+ +A +++L L + Y +L NMYA +W+ SK+R MK L
Sbjct: 380 SLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGL 439
Query: 506 GVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHV 539
G++K PG S +EI+ +H+F A DN H ++
Sbjct: 440 GLKKQ-PGFSSIEIDDCMHVFMAGDNAHVETTYI 472
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 46/260 (17%)
Query: 231 NRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL--GA 288
N+ + +SWT+ + +RN R + F +M G+ P+ + ++S C G+
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 289 LGLGKEVHHYLMVNGFGLD---VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSM 345
LG +H Y GLD V +G+++I MY+K G ++ LVF ++ KN WN+M
Sbjct: 89 EALGDLLHGYAC--KLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTM 146
Query: 346 ID-------------------------------GLATHGYAKEALKMFSEMERKGIRPNG 374
ID G GY +EAL F EM+ G++P+
Sbjct: 147 IDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206
Query: 375 VTFVSVLTACTHAGFVEEGR--SRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM 432
V ++ L ACT+ G + G R+V + +D+ + ++DL + G +E A ++
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYV-LSQDF--KNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 433 IRGMTFEPNSFI-WGALLSG 451
M E + + W +++ G
Sbjct: 264 FYNM--EKRTVVSWNSVIVG 281
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 12/237 (5%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
++ A F M + + + A++ V +AL + +M +GV P + + + A
Sbjct: 156 VDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNA 215
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAW 179
CT L + G VH +V + F +V V +L++ Y G AR+VF M +R +W
Sbjct: 216 CTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSW 275
Query: 180 TTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPC 235
++I G + F +M E+ ++ T+ + + G +E F M C
Sbjct: 276 NSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKC 335
Query: 236 KDVIS-----WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLG 287
IS + L+ YSR R D + L M + P+EV + ++++AC++ G
Sbjct: 336 DYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM---PMKPNEVVIGSLLAACSNHG 389
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 305 bits (780), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 159/470 (33%), Positives = 250/470 (53%), Gaps = 40/470 (8%)
Query: 129 GKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVR 188
K HG + + + V + L+ YS G AR+VFD M ER +W TMI + R
Sbjct: 80 AKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTR 139
Query: 189 CGEVDSAARLFDEMPER---------------------------------------NSAT 209
A +F EM N
Sbjct: 140 NRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYV 199
Query: 210 WNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGL 269
A++D YAK G I+ A +F M K ++W++++ Y +NK + + + L+ L
Sbjct: 200 GTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSL 259
Query: 270 APDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLL 329
++ +++VI AC++L AL GK++H + +GFG +V++ SS +DMYAKCGS+ S +
Sbjct: 260 EQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYI 319
Query: 330 VFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGF 389
+F ++Q KNL WN++I G A H KE + +F +M++ G+ PN VTF S+L+ C H G
Sbjct: 320 IFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGL 379
Query: 390 VEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALL 449
VEEGR F M Y +SP + HY CMVD+L + GL+ +A E+I+ + F+P + IWG+LL
Sbjct: 380 VEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLL 439
Query: 450 SGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEK 509
+ C++++NLE+A VA + L LEP N+G + LL N+YA +W+E++K R ++D V+K
Sbjct: 440 ASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKK 499
Query: 510 TCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPEL 559
G SW++I K+H F+ ++ H + GY P +
Sbjct: 500 V-RGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSV 548
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 157/335 (46%), Gaps = 45/335 (13%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAA---CTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
++ + +I+ + D L+N I A C + LA F M + + +N ++
Sbjct: 81 KACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRN 140
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
+AL +++M G + ++ SS++ AC + D+ K +H K D +++V
Sbjct: 141 RMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVG 200
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP----E 204
T L++ Y+ G+ DA +VF+ M ++ + W++M++ +V+ + A L+ E
Sbjct: 201 TALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLE 260
Query: 205 RNSATWNAMI-----------------------------------DGYAKSGNIECAEIL 229
+N T +++I D YAK G++ + I+
Sbjct: 261 QNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYII 320
Query: 230 FNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGAL 289
F+ + K++ W T+++ ++++ R +V+ LF +M G+ P+EV ++++S C H G +
Sbjct: 321 FSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLV 380
Query: 290 GLGKEVHHYLMVNGFGL--DVYIGSSLIDMYAKCG 322
G+ LM +GL +V S ++D+ + G
Sbjct: 381 EEGRRFFK-LMRTTYGLSPNVVHYSCMVDILGRAG 414
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 162/498 (32%), Positives = 271/498 (54%), Gaps = 36/498 (7%)
Query: 28 KKTLESVYANMIKTNANQDSFLMNQFIAACTTI---NLATHAFSHMDNPNALVYNALLRT 84
+ L ++A++++ + + L+ FI+ C ++ + A FSH+ NPN LV+NA+++
Sbjct: 17 RTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKC 76
Query: 85 CVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
++L+ + M G+ Y+++ L+K+C+ L D GK VHG + + GF
Sbjct: 77 YSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRL 136
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE 204
++ +VE Y+ G GDA+KVF DEM E
Sbjct: 137 GKIRIGVVELYTSGGRMGDAQKVF-------------------------------DEMSE 165
Query: 205 RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM 264
RN WN MI G+ SG++E LF +M + ++SW ++++ S+ R + + LF EM
Sbjct: 166 RNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEM 225
Query: 265 VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLD-VYIGSSLIDMYAKCGS 323
+ +G PDE + TV+ A LG L GK +H +G D + +G++L+D Y K G
Sbjct: 226 IDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGD 285
Query: 324 IDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG-IRPNGVTFVSVLT 382
++ + +F K+Q +N+ WN++I G A +G + + +F M +G + PN TF+ VL
Sbjct: 286 LEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLA 345
Query: 383 ACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNS 442
C++ G VE G F M+E + + EHYG MVDL+S+ G I +A + ++ M N+
Sbjct: 346 CCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVNANA 405
Query: 443 FIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAM 502
+WG+LLS C+ H ++++A VA L+ +EP NSG Y LL N+YAE RW++V K+R M
Sbjct: 406 AMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLM 465
Query: 503 KDLGVEKTCPGSSWVEIN 520
K + K+ S+ +++
Sbjct: 466 KKNRLRKSTGQSTICDVS 483
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 166/483 (34%), Positives = 268/483 (55%), Gaps = 36/483 (7%)
Query: 54 IAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSF 113
+++ ++ A S + +P +N ++R + ++++ Y++MLR G++P ++
Sbjct: 52 LSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTY 111
Query: 114 SSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE 173
L+K+ + L + G ++H V K G + +F+ TL+ Y ARK
Sbjct: 112 PFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARK------- 164
Query: 174 RDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRM 233
LFDEMP +N TWN+++D YAKSG++ A ++F+ M
Sbjct: 165 ------------------------LFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEM 200
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAP-DEVAMTTVISACAHLGALGLG 292
+DV++W++++ Y + + + +F +M+ G + +EV M +VI ACAHLGAL G
Sbjct: 201 SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRG 260
Query: 293 KEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK--NLFCWNSMIDGLA 350
K VH Y++ L V + +SLIDMYAKCGSI + VFY+ VK + WN++I GLA
Sbjct: 261 KTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLA 320
Query: 351 THGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGI 410
+HG+ +E+L++F +M I P+ +TF+ +L AC+H G V+E F S+ E P
Sbjct: 321 SHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGA-EPKS 379
Query: 411 EHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMI 470
EHY CMVD+LS+ GL++DA + I M +P + GALL+GC H NLE+A + L+
Sbjct: 380 EHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVGKKLIE 439
Query: 471 LEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASD 530
L+P N G Y L N+YA +++ +R AM+ GV+K G S ++++ H F A D
Sbjct: 440 LQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIA-GHSILDLDGTRHRFIAHD 498
Query: 531 NYH 533
H
Sbjct: 499 KTH 501
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 144/300 (48%), Gaps = 28/300 (9%)
Query: 171 MPERDAFAWTTM-ISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEIL 229
+ E + F T+ SA G+VD A + ++ + + WN +I G++ S N E + +
Sbjct: 36 LSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISV 95
Query: 230 FNRM----PCKDVISWTTLMTCYSR--NKRFGDVVTLFHEMVSRGLAPDEVAMTTVI--- 280
+ +M D +++ LM SR N++ G +L +V GL D T+I
Sbjct: 96 YIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGG--SLHCSVVKSGLEWDLFICNTLIHMY 153
Query: 281 -SACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL 339
S A L E+ H +V +S++D YAK G + + LVF ++ +++
Sbjct: 154 GSFRDQASARKLFDEMPHKNLVT--------WNSILDAYAKSGDVVSARLVFDEMSERDV 205
Query: 340 FCWNSMIDGLATHGYAKEALKMFSEMERKG-IRPNGVTFVSVLTACTHAGFVEEGRS--R 396
W+SMIDG G +AL++F +M R G + N VT VSV+ AC H G + G++ R
Sbjct: 206 VTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHR 265
Query: 397 FVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMI-RGMTFEPNSFIWGALLSGCKLH 455
+ I D + + ++D+ +K G I DA + R E ++ +W A++ G H
Sbjct: 266 Y---ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASH 322
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 171/499 (34%), Positives = 268/499 (53%), Gaps = 42/499 (8%)
Query: 75 ALVYNALLRTCVH---CHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
+ ++N ++R VH + H ++ Y++M + V P ++F L+ + + G+
Sbjct: 24 SFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQR 83
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGE 191
H + G D +D F T++++ + CG+
Sbjct: 84 THAQILLFGLD-------------------------------KDPFVRTSLLNMYSSCGD 112
Query: 192 VDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRN 251
+ SA R+FD+ ++ WN++++ YAK+G I+ A LF+ MP ++VISW+ L+ Y
Sbjct: 113 LRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMC 172
Query: 252 KRFGDVVTLFHEMV-----SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL 306
++ + + LF EM + P+E M+TV+SAC LGAL GK VH Y+ +
Sbjct: 173 GKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEI 232
Query: 307 DVYIGSSLIDMYAKCGSIDRSLLVFYKL-QVKNLFCWNSMIDGLATHGYAKEALKMFSEM 365
D+ +G++LIDMYAKCGS++R+ VF L K++ +++MI LA +G E ++FSEM
Sbjct: 233 DIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEM 292
Query: 366 E-RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGG 424
I PN VTFV +L AC H G + EG+S F MIE++ I+P I+HYGCMVDL + G
Sbjct: 293 TTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSG 352
Query: 425 LIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVN 484
LI++A I M EP+ IWG+LLSG ++ +++ A++ L+ L+P NSG Y LL N
Sbjct: 353 LIKEAESFIASMPMEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSN 412
Query: 485 MYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXX 544
+YA+ RW EV IR M+ G+ K PG S+VE+ +H F D +
Sbjct: 413 VYAKTGRWMEVKCIRHEMEVKGINKV-PGCSYVEVEGVVHEFVVGDESQQESERIYAMLD 471
Query: 545 XXXXXXXXAGYVPELGSIL 563
AGYV + +L
Sbjct: 472 EIMQRLREAGYVTDTKEVL 490
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/549 (30%), Positives = 290/549 (52%), Gaps = 46/549 (8%)
Query: 23 CSKREKKTL-ESVYANMIKTNANQDSFLMNQFIA---ACTTINLATHAFSHMDNPNALVY 78
CS+ E ++ +++K + D ++ ++ C + A FS + + ++
Sbjct: 282 CSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIW 341
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWK 138
NA++ + AL + M + V+P S++ S+++ C++L GK+VH ++K
Sbjct: 342 NAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK 401
Query: 139 RGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARL 198
R + +++ L+ YS G DA VF M E+D AW ++IS + G+ A ++
Sbjct: 402 RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKV 461
Query: 199 FDEMPERNSA-----------------------------------------TWNAMIDGY 217
F +M + + + +++ID Y
Sbjct: 462 FGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLY 521
Query: 218 AKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMT 277
+K G E A +F M +++++W ++++CYSRN + LF+ M+S+G+ PD V++T
Sbjct: 522 SKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSIT 581
Query: 278 TVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK 337
+V+ A + +L GK +H Y + G D ++ ++LIDMY KCG + +F K+Q K
Sbjct: 582 SVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHK 641
Query: 338 NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRF 397
+L WN MI G +HG AL +F EM++ G P+ VTF+S+++AC H+GFVEEG++ F
Sbjct: 642 SLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIF 701
Query: 398 VSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRN 457
M +DY I P +EHY MVDLL + GL+E+A I+ M E +S IW LLS + H N
Sbjct: 702 EFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHN 761
Query: 458 LEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWV 517
+E+ ++ + L+ +EP Y L+N+Y E E +K+ MK+ G+ K PG SW+
Sbjct: 762 VELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQ-PGCSWI 820
Query: 518 EINQKIHLF 526
E++ + ++F
Sbjct: 821 EVSDRTNVF 829
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/481 (25%), Positives = 220/481 (45%), Gaps = 59/481 (12%)
Query: 25 KREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHM----DNPNALVYNA 80
+RE+ + ++ M++ + + DSFL I L+ A+ D N +++N
Sbjct: 185 RREEG--KQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNV 242
Query: 81 LLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRG 140
++ +L Y+ N V S SF+ + AC+ +S G+ +H V K G
Sbjct: 243 MIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG 302
Query: 141 FDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFD 200
+V T+L+ YS G+ G+A VF + ++ W M++A+ SA LF
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 201 EMPERN---------------------------------------SATWNAMIDGYAKSG 221
M +++ S +A++ Y+K G
Sbjct: 363 FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCG 422
Query: 222 NIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV--SRGLAPDEVAMTTV 279
A ++F M KD+++W +L++ +N +F + + +F +M L PD MT+V
Sbjct: 423 CDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSV 482
Query: 280 ISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL 339
+ACA L AL G +VH ++ G L+V++GSSLID+Y+KCG + +L VF + +N+
Sbjct: 483 TNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENM 542
Query: 340 FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVS 399
WNSMI + + + ++ +F+ M +GI P+ V+ SVL A + + +G+S
Sbjct: 543 VAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKS---- 598
Query: 400 MIEDYCISPGIEH----YGCMVDLLSKGGLIEDALEMIRGMTFEPNSFI-WGALLSGCKL 454
+ Y + GI ++D+ K G + A + + M + S I W ++ G
Sbjct: 599 -LHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKM--QHKSLITWNLMIYGYGS 655
Query: 455 H 455
H
Sbjct: 656 H 656
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 125/510 (24%), Positives = 222/510 (43%), Gaps = 62/510 (12%)
Query: 32 ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAF-------SHMDNPNALVYNAL 81
++++ +++ D F+ + C ++ A F S + + V+N++
Sbjct: 80 KTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSM 139
Query: 82 LRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMD--SAAGKTVHGHVWKR 139
+ R + + C+ +ML GV P ++S S +V + GK +HG + +
Sbjct: 140 IDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRN 199
Query: 140 GFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER-DAFAWTTMISAHVRCGEVDSAARL 198
D F++T L++ Y GL+ DA +VF E+ ++ + W MI G +S+ L
Sbjct: 200 SLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDL 259
Query: 199 FDEMPERNSATW----------------------------------------NAMIDGYA 218
+ + + NS +++ Y+
Sbjct: 260 Y-MLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYS 318
Query: 219 KSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTT 278
K G + AE +F+ + K + W ++ Y+ N + LF M + + PD ++
Sbjct: 319 KCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSN 378
Query: 279 VISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKN 338
VIS C+ LG GK VH L I S+L+ +Y+KCG + LVF ++ K+
Sbjct: 379 VISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKD 438
Query: 339 LFCWNSMIDGLATHGYAKEALKMFSEM--ERKGIRPNGVTFVSVLTACTHAGFVEEGRSR 396
+ W S+I GL +G KEALK+F +M + ++P+ SV AC + G
Sbjct: 439 MVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQV 498
Query: 397 FVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHR 456
SMI+ + + ++DL SK GL E AL++ M+ E N W +++S C
Sbjct: 499 HGSMIKTGLV-LNVFVGSSLIDLYSKCGLPEMALKVFTSMSTE-NMVAWNSMIS-CYSRN 555
Query: 457 NLEIANVAVQNLMILE---PSNSGYYSLLV 483
NL ++ + NLM+ + P + S+LV
Sbjct: 556 NLPELSIDLFNLMLSQGIFPDSVSITSVLV 585
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/429 (25%), Positives = 181/429 (42%), Gaps = 59/429 (13%)
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVP---TSYSFSSLVKACTLLMDSAAGKTVHGH 135
N+ +R + QAL Y K +G P + ++F SL+KAC+ L + + GKT+HG
Sbjct: 28 NSGIRALIQKGEYLQALHLYSK--HDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGS 85
Query: 136 VWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE-------RDAFAWTTMISAHVR 188
V G+ F+ T+LV Y G A +VFD + RD W +MI + +
Sbjct: 86 VVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFK 145
Query: 189 CGEVDSAARLFDEM------PE------------------------------RNSATWN- 211
F M P+ RNS +
Sbjct: 146 FRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDS 205
Query: 212 ----AMIDGYAKSG-NIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVS 266
A+ID Y K G +I+ + +V+ W ++ + + + L+ +
Sbjct: 206 FLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKN 265
Query: 267 RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDR 326
+ + T + AC+ G G+++H ++ G D Y+ +SL+ MY+KCG +
Sbjct: 266 NSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
Query: 327 SLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
+ VF + K L WN+M+ A + Y AL +F M +K + P+ T +V++ C+
Sbjct: 326 AETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSV 385
Query: 387 AGFVEEGRSRFVSMIEDYCISPG-IEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIW 445
G G+S + + S IE ++ L SK G DA + + M E + W
Sbjct: 386 LGLYNYGKSVHAELFKRPIQSTSTIE--SALLTLYSKCGCDPDAYLVFKSME-EKDMVAW 442
Query: 446 GALLSG-CK 453
G+L+SG CK
Sbjct: 443 GSLISGLCK 451
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 303 bits (775), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 177/572 (30%), Positives = 278/572 (48%), Gaps = 81/572 (14%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALA--CYVKMLRNGVV-------PTSYSFSSLVKACTL 122
NPN ++ +R +A+ C K+LR V P + ++ +L++ C+
Sbjct: 38 NPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQ 97
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP---------- 172
GK VH H+ GF + + L+ Y+ G DARKVFDEMP
Sbjct: 98 TRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVM 157
Query: 173 ---------------------ERDAFAWTTMISAHVRCGEVDSAARLFDEMP-------- 203
E+D+++WT M++ +V+ + + A L+ M
Sbjct: 158 VNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPN 217
Query: 204 --------------------------------ERNSATWNAMIDGYAKSGNIECAEILFN 231
+ + W++++D Y K G I+ A +F+
Sbjct: 218 IFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFD 277
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
++ KDV+SWT+++ Y ++ R+ + +LF E+V P+E V++ACA L L
Sbjct: 278 KIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEEL 337
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
GK+VH Y+ GF + SSL+DMY KCG+I+ + V +L W S+I G A
Sbjct: 338 GKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQ 397
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIE 411
+G EALK F + + G +P+ VTFV+VL+ACTHAG VE+G F S+ E + +S +
Sbjct: 398 NGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSD 457
Query: 412 HYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMIL 471
HY C+VDLL++ G E +I M +P+ F+W ++L GC + N+++A A Q L +
Sbjct: 458 HYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKI 517
Query: 472 EPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDN 531
EP N Y + N+YA +W+E K+R M+++GV K PGSSW EI +K H+F A+D
Sbjct: 518 EPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKR-PGSSWTEIKRKRHVFIAADT 576
Query: 532 YHTSYGHVNXXXXXXXXXXXXAGYVPELGSIL 563
H Y + GYVP +L
Sbjct: 577 SHPMYNQIVEFLRELRKKMKEEGYVPATSLVL 608
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 303 bits (775), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 165/463 (35%), Positives = 245/463 (52%), Gaps = 39/463 (8%)
Query: 55 AACTTINLATHAFSHMDNPNALVYNALLRTC-VHCHRSHQALACYVKMLRNGVVPTSYSF 113
A+ ++ AT F + NP+ +N ++R C +H S + +V+M R V P ++F
Sbjct: 59 ASKEVVSYATSVFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTF 118
Query: 114 SSLVKACTLLM--DSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEM 171
+ KAC D KT+H + G + +F TL+ YS++ A ++FDE
Sbjct: 119 PFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDEN 178
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFN 231
P+RD + +I V+ E+ A LFD MP R+ +WN++I GYA+ +
Sbjct: 179 PQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNH--------- 229
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
C++ I LF EMV+ GL PD VA+ + +SACA G
Sbjct: 230 ---CREAIK-------------------LFDEMVALGLKPDNVAIVSTLSACAQSGDWQK 267
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
GK +H Y +D ++ + L+D YAKCG ID ++ +F K LF WN+MI GLA
Sbjct: 268 GKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAM 327
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIE 411
HG + + F +M GI+P+GVTF+SVL C+H+G V+E R+ F M Y ++ ++
Sbjct: 328 HGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMK 387
Query: 412 HYGCMVDLLSKGGLIEDALEMIRGMTFEPNS----FIWGALLSGCKLHRNLEIANVAVQN 467
HYGCM DLL + GLIE+A EMI M + + W LL GC++H N+EIA A
Sbjct: 388 HYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANR 447
Query: 468 LMILEPSNSGYYSLLVNMYAEVNRWKEVSKIR-IAMKDLGVEK 509
+ L P + G Y ++V MYA RW+EV K+R I +D V+K
Sbjct: 448 VKALSPEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKK 490
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 157/510 (30%), Positives = 263/510 (51%), Gaps = 46/510 (9%)
Query: 99 VKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSML 158
+++L P+ ++ L+ C + VH H+ G D F+ T L+ YS L
Sbjct: 66 IRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDL 125
Query: 159 GLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------PERNSATW-- 210
G ARKVFD+ +R + W + A G + L+ +M +R + T+
Sbjct: 126 GSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVL 185
Query: 211 -----------------------------------NAMIDGYAKSGNIECAEILFNRMPC 235
++D YA+ G ++ A +F MP
Sbjct: 186 KACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPV 245
Query: 236 KDVISWTTLMTCYSRNKRFGDVVTLFHEMV--SRGLAPDEVAMTTVISACAHLGALGLGK 293
++V+SW+ ++ CY++N + + + F EM+ ++ +P+ V M +V+ ACA L AL GK
Sbjct: 246 RNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGK 305
Query: 294 EVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHG 353
+H Y++ G + + S+L+ MY +CG ++ VF ++ +++ WNS+I HG
Sbjct: 306 LIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHG 365
Query: 354 YAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHY 413
Y K+A+++F EM G P VTFVSVL AC+H G VEEG+ F +M D+ I P IEHY
Sbjct: 366 YGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHY 425
Query: 414 GCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEP 473
CMVDLL + +++A +M++ M EP +WG+LL C++H N+E+A A + L LEP
Sbjct: 426 ACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEP 485
Query: 474 SNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYH 533
N+G Y LL ++YAE W EV +++ ++ G++K PG W+E+ +K++ F + D ++
Sbjct: 486 KNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQK-LPGRCWMEVRRKMYSFVSVDEFN 544
Query: 534 TSYGHVNXXXXXXXXXXXXAGYVPELGSIL 563
++ GY+P+ +L
Sbjct: 545 PLMEQIHAFLVKLAEDMKEKGYIPQTKGVL 574
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 163/494 (32%), Positives = 263/494 (53%), Gaps = 35/494 (7%)
Query: 71 DNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGK 130
DN + YNA++ V+ +AL +M+ +G+ +++ S+++AC GK
Sbjct: 247 DNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGK 306
Query: 131 TVHGHVWKR-GFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRC 189
VH +V +R F H FD +++S + +C
Sbjct: 307 QVHAYVLRREDFSFH-----------------------FD----------NSLVSLYYKC 333
Query: 190 GEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYS 249
G+ D A +F++MP ++ +WNA++ GY SG+I A+++F M K+++SW +++ +
Sbjct: 334 GKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLA 393
Query: 250 RNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVY 309
N + + LF M G P + A + I +CA LGA G++ H L+ GF +
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLS 453
Query: 310 IGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG 369
G++LI MYAKCG ++ + VF + + WN++I L HG+ EA+ ++ EM +KG
Sbjct: 454 AGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDA 429
IRP+ +T ++VLTAC+HAG V++GR F SM Y I PG +HY ++DLL + G DA
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDA 573
Query: 430 LEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEV 489
+I + F+P + IW ALLSGC++H N+E+ +A L L P + G Y LL NM+A
Sbjct: 574 ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAAT 633
Query: 490 NRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXX 549
+W+EV+++R M+D GV+K SW+E+ ++H F D H V
Sbjct: 634 GQWEEVARVRKLMRDRGVKKEV-ACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKE 692
Query: 550 XXXAGYVPELGSIL 563
GYVP+ +L
Sbjct: 693 MRRLGYVPDTSFVL 706
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/422 (24%), Positives = 180/422 (42%), Gaps = 77/422 (18%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAG-KTV 132
+ ++YNA++ H + + A+ + KM G P +++F+S++ L+ D
Sbjct: 112 DTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQF 171
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGE- 191
H K G V LV YS +C
Sbjct: 172 HAAALKSGAGYITSVSNALVSVYS-------------------------------KCASS 200
Query: 192 ---VDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCK-DVISWTTLMTC 247
+ SA ++FDE+ E++ +W M+ GY K+G + E L M ++++ +++
Sbjct: 201 PSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISG 260
Query: 248 YSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLD 307
Y + + + + MVS G+ DE +VI ACA G L LGK+VH Y++
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFS 319
Query: 308 VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNS----------------------- 344
+ +SL+ +Y KCG D + +F K+ K+L WN+
Sbjct: 320 FHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKE 379
Query: 345 --------MIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSR 396
MI GLA +G+ +E LK+FS M+R+G P F + +C G G+
Sbjct: 380 KNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQY 439
Query: 397 FVSMIE---DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCK 453
+++ D +S G ++ + +K G++E+A ++ R M +S W AL++
Sbjct: 440 HAQLLKIGFDSSLSAG----NALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALG 494
Query: 454 LH 455
H
Sbjct: 495 QH 496
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 135/313 (43%), Gaps = 50/313 (15%)
Query: 182 MISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPC--KDVI 239
+I + + E++ A +LFDE+ E + M+ GY SG+I A +F + P +D +
Sbjct: 55 LIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTV 114
Query: 240 SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK--EVHH 297
+ ++T +S N + LF +M G PD +V++ A L A + + H
Sbjct: 115 MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLA-LVADDEKQCVQFHA 173
Query: 298 YLMVNGFGLDVYIGSSLIDMYAKCGSI------------------DRSLLVFYKLQVKN- 338
+ +G G + ++L+ +Y+KC S +RS VKN
Sbjct: 174 AALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNG 233
Query: 339 -----------------LFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
L +N+MI G G+ +EAL+M M GI + T+ SV+
Sbjct: 234 YFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVI 293
Query: 382 TACTHAGFVEEGRS--RFVSMIEDYCISPGIEHY-GCMVDLLSKGGLIEDALEMIRGMTF 438
AC AG ++ G+ +V ED+ H+ +V L K G ++A + M
Sbjct: 294 RACATAGLLQLGKQVHAYVLRREDFSF-----HFDNSLVSLYYKCGKFDEARAIFEKMPA 348
Query: 439 EPNSFIWGALLSG 451
+ + W ALLSG
Sbjct: 349 K-DLVSWNALLSG 360
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 102/244 (41%), Gaps = 16/244 (6%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
I A F M N L + ++ + L + M R G P Y+FS +K+
Sbjct: 367 IGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKS 426
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAW 179
C +L G+ H + K GFD+ + L+ Y+ G+ +AR+VF MP D+ +W
Sbjct: 427 CAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSW 486
Query: 180 TTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRM-- 233
+I+A + G A +++EM ++ + T ++ + +G ++ F+ M
Sbjct: 487 NALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMET 546
Query: 234 -----PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA 288
P D + L+ R+ +F D ++ + P ++S C G
Sbjct: 547 VYRIPPGAD--HYARLIDLLCRSGKFSDAESVIESLP---FKPTAEIWEALLSGCRVHGN 601
Query: 289 LGLG 292
+ LG
Sbjct: 602 MELG 605
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 302 bits (773), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 178/574 (31%), Positives = 287/574 (50%), Gaps = 57/574 (9%)
Query: 46 DSFLMNQFIAACTTI-NLATHA--FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKML 102
+SF++N +A + LA+ + + +N +L + + +AL +M+
Sbjct: 235 NSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMV 294
Query: 103 RNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRG-FDAHVFVQTTLVEFYSMLGLA 161
GV P ++ SS++ AC+ L GK +H + K G D + FV + LV+ Y
Sbjct: 295 LEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQV 354
Query: 162 GDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE----------------- 204
R+VFD M +R W MI+ + + A LF M E
Sbjct: 355 LSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPA 414
Query: 205 -----------------------RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISW 241
R+ N ++D Y++ G I+ A +F +M +D+++W
Sbjct: 415 CVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTW 474
Query: 242 TTLMTCYSRNKRFGDVVTLFHEM------VSRG-----LAPDEVAMTTVISACAHLGALG 290
T++T Y ++ D + L H+M VS+G L P+ + + T++ +CA L AL
Sbjct: 475 NTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALA 534
Query: 291 LGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLA 350
GKE+H Y + N DV +GS+L+DMYAKCG + S VF ++ KN+ WN +I
Sbjct: 535 KGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYG 594
Query: 351 THGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGI 410
HG +EA+ + M +G++PN VTF+SV AC+H+G V+EG F M DY + P
Sbjct: 595 MHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSS 654
Query: 411 EHYGCMVDLLSKGGLIEDALEMIRGMTFEPN-SFIWGALLSGCKLHRNLEIANVAVQNLM 469
+HY C+VDLL + G I++A +++ M + N + W +LL ++H NLEI +A QNL+
Sbjct: 655 DHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLI 714
Query: 470 ILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAAS 529
LEP+ + +Y LL N+Y+ W + +++R MK+ GV K PG SW+E ++H F A
Sbjct: 715 QLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKE-PGCSWIEHGDEVHKFVAG 773
Query: 530 DNYHTSYGHVNXXXXXXXXXXXXAGYVPELGSIL 563
D+ H ++ GYVP+ +L
Sbjct: 774 DSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVL 807
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 134/509 (26%), Positives = 231/509 (45%), Gaps = 81/509 (15%)
Query: 81 LLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRG 140
LLR+ V + +A+ YV M+ G+ P +Y+F +L+KA L D GK +H HV+K G
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 141 FDAH-VFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLF 199
+ V V TLV Y G G KVFD + ER+ +W ++IS+ + + A F
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 200 ----DE--------------------MPE-----------------RNSATWNAMIDGYA 218
DE MPE NS N ++ Y
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFIINTLVAMYG 247
Query: 219 KSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTT 278
K G + +++L +D+++W T+++ +N++ + + EMV G+ PDE +++
Sbjct: 248 KLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISS 307
Query: 279 VISACAHLGALGLGKEVHHYLMVNG-FGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK 337
V+ AC+HL L GKE+H Y + NG + ++GS+L+DMY C + VF + +
Sbjct: 308 VLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDR 367
Query: 338 NLFCWNSMIDGLATHGYAKEALKMFSEMERK-GIRPNGVTFVSVLTACTHAGFVEEGRSR 396
+ WN+MI G + + + KEAL +F ME G+ N T V+ AC +G +
Sbjct: 368 KIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEA- 426
Query: 397 FVSMIEDYCISPGIEH----YGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGC 452
I + + G++ ++D+ S+ G I+ A+ I G + + W +++G
Sbjct: 427 ----IHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMR-IFGKMEDRDLVTWNTMITGY 481
Query: 453 KLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSK--IRIAMKD-----L 505
+ E A + + + LE ++VSK R+++K +
Sbjct: 482 VFSEHHEDALLLLHKMQNLE--------------------RKVSKGASRVSLKPNSITLM 521
Query: 506 GVEKTCPGSSWVEINQKIHLFAASDNYHT 534
+ +C S + ++IH +A +N T
Sbjct: 522 TILPSCAALSALAKGKEIHAYAIKNNLAT 550
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 212/483 (43%), Gaps = 60/483 (12%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSL 116
C F + N + +N+L+ + + AL + ML V P+S++ S+
Sbjct: 146 CGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSV 205
Query: 117 VKACT-LLMDSA--AGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE 173
V AC+ L M GK VH + ++G + + F+ TLV Y LG ++ +
Sbjct: 206 VTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGG 264
Query: 174 RDAFAWTTMISAHVRCGEVDSAARLFDEM------P------------------------ 203
RD W T++S+ + ++ A EM P
Sbjct: 265 RDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKEL 324
Query: 204 ----------ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKR 253
+ NS +A++D Y + +F+ M + + W ++ YS+N+
Sbjct: 325 HAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEH 384
Query: 254 FGDVVTLFHEM-VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
+ + LF M S GL + M V+ AC GA + +H +++ G D ++ +
Sbjct: 385 DKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQN 444
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEME------ 366
+L+DMY++ G ID ++ +F K++ ++L WN+MI G + ++AL + +M+
Sbjct: 445 TLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKV 504
Query: 367 -----RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLS 421
R ++PN +T +++L +C + +G+ I++ ++ + +VD+ +
Sbjct: 505 SKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNN-LATDVAVGSALVDMYA 563
Query: 422 KGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMI--LEPSNSGYY 479
K G ++ + ++ + + N W ++ +H N + A ++ +M+ ++P+ +
Sbjct: 564 KCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFI 622
Query: 480 SLL 482
S+
Sbjct: 623 SVF 625
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 128/292 (43%), Gaps = 54/292 (18%)
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
W L+ R+ + V + +M+ G+ PD A ++ A A L + LGK++H ++
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 301 VNGFGLD-VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEAL 359
G+G+D V + ++L+++Y KCG VF ++ +N WNS+I L + + AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 360 KMFSEMERKGIRPNGVTFVSVLTACT--------------HAGFVEEGRSRFVSMIEDYC 405
+ F M + + P+ T VSV+TAC+ HA + +G + +
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE------LNSFI 238
Query: 406 ISPGIEHYGCMVDLLSKGGLIE------------------------DALEMIRGMTF--- 438
I+ + YG + L S L+ +ALE +R M
Sbjct: 239 INTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGV 298
Query: 439 EPNSFIWGALLSGCK----LHRNLEIANVAVQNLMILEPSNSGYYSLLVNMY 486
EP+ F ++L C L E+ A++N + E S G S LV+MY
Sbjct: 299 EPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVG--SALVDMY 348
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 268/487 (55%), Gaps = 41/487 (8%)
Query: 52 QFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSY 111
+F +A F+ M +P+ +N ++ S +AL Y KM+ +G+ P Y
Sbjct: 174 KFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEY 233
Query: 112 SFSSLVKACTLLMDSAAGKTVHGHVWKRG--FDAHVFVQTTLVEFYSMLGLAGDARKVFD 169
+ SL+ C L D GK VHG + +RG + +++ + L++ Y
Sbjct: 234 TVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMY-------------- 279
Query: 170 EMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEIL 229
+C E A R FD M +++ +WN M+ G+ + G++E A+ +
Sbjct: 280 -----------------FKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAV 322
Query: 230 FNRMPCKDVISWTTLMTCYSR---NKRFGDVVTLFHEM-VSRGLAPDEVAMTTVISACAH 285
F++MP +D++SW +L+ YS+ ++R V LF+EM + + PD V M ++IS A+
Sbjct: 323 FDQMPKRDLVSWNSLLFGYSKKGCDQR--TVRELFYEMTIVEKVKPDRVTMVSLISGAAN 380
Query: 286 LGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSM 345
G L G+ VH ++ D ++ S+LIDMY KCG I+R+ +VF K++ W SM
Sbjct: 381 NGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSM 440
Query: 346 IDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYC 405
I GLA HG ++AL++F M+ +G+ PN VT ++VLTAC+H+G VEEG F M + +
Sbjct: 441 ITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFG 500
Query: 406 ISPGIEHYGCMVDLLSKGGLIEDALEMI-RGMTFEPNSFIWGALLSGCKLHRNLEIANVA 464
P EHYG +VDLL + G +E+A +++ + M P+ +WG++LS C+ ++E A +A
Sbjct: 501 FDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELA 560
Query: 465 VQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIH 524
+ L+ LEP G Y LL N+YA V RW K R AM++ GV+KT SS V + + +H
Sbjct: 561 LTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGV-EGLH 619
Query: 525 LFAASDN 531
F A++
Sbjct: 620 RFVAAEK 626
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 134/288 (46%), Gaps = 47/288 (16%)
Query: 210 WNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGL 269
WN+++ Y + GN AE +F RMP DV S+ ++ Y++ + + L+ +MVS G+
Sbjct: 169 WNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGI 228
Query: 270 APDEVAMTTVISACAHLGALGLGKEVHHYLMVNG--FGLDVYIGSSLIDMYAKCGSIDRS 327
PDE + +++ C HL + LGK VH ++ G + ++ + ++L+DMY KC +
Sbjct: 229 EPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLA 288
Query: 328 LLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG------------------ 369
F ++ K++ WN+M+ G G + A +F +M ++
Sbjct: 289 KRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQ 348
Query: 370 ---------------IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE-----DYCISPG 409
++P+ VT VS+++ + G + GR +I D +S
Sbjct: 349 RTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS-- 406
Query: 410 IEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRN 457
++D+ K G+IE A + + T E + +W ++++G H N
Sbjct: 407 ----SALIDMYCKCGIIERAFMVFKTAT-EKDVALWTSMITGLAFHGN 449
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 96/177 (54%), Gaps = 11/177 (6%)
Query: 222 NIECAEILF-NRMPCKDVISWTTLMTCYS--RNKRFGDVVTLFHEMVSRGLAPDEVAMTT 278
N++ A++LF N P +V + T+++ S +N+ FG L+ M+ ++PD
Sbjct: 83 NLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFG----LYSSMIRHRVSPDRQTFLY 138
Query: 279 VISACAHLGALGLGKEVHHYLMVNG-FGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK 337
++ A + L + K++H +++V+G L Y+ +SL+ Y + G+ + VF ++
Sbjct: 139 LMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHP 195
Query: 338 NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGR 394
++ +N MI G A G++ EALK++ +M GI P+ T +S+L C H + G+
Sbjct: 196 DVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 114/283 (40%), Gaps = 16/283 (5%)
Query: 12 LKDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMD 71
L + +LD +C +E + + M K + + ++ F+ + A F M
Sbjct: 271 LSNALLDMYFKC--KESGLAKRAFDAMKKKDMRSWNTMVVGFVR-LGDMEAAQAVFDQMP 327
Query: 72 NPNALVYNALL--RTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAG 129
+ + +N+LL + C + Y + V P + SL+ + + G
Sbjct: 328 KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHG 387
Query: 130 KTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRC 189
+ VHG V + F+ + L++ Y G+ A VF E+D WT+MI+
Sbjct: 388 RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFH 447
Query: 190 GEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCK-----DVIS 240
G A +LF M E N+ T A++ + SG +E +FN M K +
Sbjct: 448 GNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEH 507
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISAC 283
+ +L+ R R + + + + + P + +++SAC
Sbjct: 508 YGSLVDLLCRAGRVEEAKDIVQKKMP--MRPSQSMWGSILSAC 548
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 298 bits (763), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 161/544 (29%), Positives = 284/544 (52%), Gaps = 41/544 (7%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
++LA F + +++ +N L+ +++ ++KM ++G P+ ++FS ++KA
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAW 179
L D A G+ +H GF V +++FYS + R +FDEMPE D ++
Sbjct: 260 VVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSY 319
Query: 180 TTMISAHVRCGEVDSAARLFDEMP-----ERNSA-------------------------- 208
+IS++ + + +++ F EM RN
Sbjct: 320 NVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 209 --------TWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTL 260
N+++D YAK E AE++F +P + +SWT L++ Y + G + L
Sbjct: 380 ATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKL 439
Query: 261 FHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAK 320
F +M L D+ TV+ A A +L LGK++H +++ +G +V+ GS L+DMYAK
Sbjct: 440 FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAK 499
Query: 321 CGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSV 380
CGSI ++ VF ++ +N WN++I A +G + A+ F++M G++P+ V+ + V
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGV 559
Query: 381 LTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEP 440
LTAC+H GFVE+G F +M Y I+P +HY CM+DLL + G +A +++ M FEP
Sbjct: 560 LTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEP 619
Query: 441 NSFIWGALLSGCKLHRNLEIANVAVQNLMILEP-SNSGYYSLLVNMYAEVNRWKEVSKIR 499
+ +W ++L+ C++H+N +A A + L +E ++ Y + N+YA W++V ++
Sbjct: 620 DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVK 679
Query: 500 IAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPEL 559
AM++ G++K P SWVE+N KIH+F+++D H + + GY P+
Sbjct: 680 KAMRERGIKKV-PAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIEREGYKPDT 738
Query: 560 GSIL 563
S++
Sbjct: 739 SSVV 742
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 162/412 (39%), Gaps = 79/412 (19%)
Query: 130 KTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRC 189
+ V + K GFD +VE G ARKV+DEMP ++ + TMIS HV+
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 190 GEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYS 249
G+V SA LFD MP+R TW ++ YA
Sbjct: 93 GDVSSARDLFDAMPDRTVVTWTILMGWYA------------------------------- 121
Query: 250 RNKRFGDVVTLFHEMV--SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLD 307
RN F + LF +M S PD V TT++ C +VH + + GF +
Sbjct: 122 RNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTN 181
Query: 308 VYIGSS--LIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM 365
++ S L+ Y + +D + ++F ++ K+ +N++I G G E++ +F +M
Sbjct: 182 PFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM 241
Query: 366 ERKGIRPNGVTFVSVLTACT-----------HAGFVEEGRSRFVS--------------- 399
+ G +P+ TF VL A HA V G SR S
Sbjct: 242 RQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRV 301
Query: 400 ----MIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGAL---- 448
M+ D Y ++ S+ E +L R M F+ +F + +
Sbjct: 302 LETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIA 361
Query: 449 --LSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKI 498
LS ++ R L + IL NS LV+MYA+ ++E I
Sbjct: 362 ANLSSLQMGRQLHCQALLATADSILHVGNS-----LVDMYAKCEMFEEAELI 408
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 146/346 (42%), Gaps = 47/346 (13%)
Query: 150 TLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSAT 209
T++ + G AR +FD MP+R WT ++ + R D A +LF +M +S T
Sbjct: 84 TMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCT 143
Query: 210 W-------------------------------------------NAMIDGYAKSGNIECA 226
N ++ Y + ++ A
Sbjct: 144 LPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLA 203
Query: 227 EILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
+LF +P KD +++ TL+T Y ++ + + + LF +M G P + + V+ A L
Sbjct: 204 CVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGL 263
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMI 346
LG+++H + GF D +G+ ++D Y+K + + ++F ++ + +N +I
Sbjct: 264 HDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVI 323
Query: 347 DGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCI 406
+ + +L F EM+ G F ++L+ + ++ GR +
Sbjct: 324 SSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQAL--LAT 381
Query: 407 SPGIEHYG-CMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
+ I H G +VD+ +K + E+A E+I + + W AL+SG
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEA-ELIFKSLPQRTTVSWTALISG 426
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/395 (21%), Positives = 164/395 (41%), Gaps = 75/395 (18%)
Query: 32 ESVYANMIKTNANQDSFLMNQ---FIAACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
+ ++A + T ++D+ + NQ F + + F M + + YN ++ +
Sbjct: 270 QQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQA 329
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
+ +L + +M G ++ F++++ L G+ +H D+ + V
Sbjct: 330 DQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG 389
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERN-- 206
+LV+ Y+ + +A +F +P+R +WT +IS +V+ G + +LF +M N
Sbjct: 390 NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLR 449
Query: 207 ------------SATW-------------------------NAMIDGYAKSGNIECAEIL 229
SA++ + ++D YAK G+I+ A +
Sbjct: 450 ADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQV 509
Query: 230 FNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGAL 289
F MP ++ +SW L++ ++ N + F +M+ GL PD V++ V++AC+H G +
Sbjct: 510 FEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFV 569
Query: 290 GLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGL 349
G E + M +G+ + K+ C M+D L
Sbjct: 570 EQGTE-YFQAMSPIYGI--------------------------TPKKKHYAC---MLDLL 599
Query: 350 ATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
+G EA K+ EM P+ + + SVL AC
Sbjct: 600 GRNGRFAEAEKLMDEMP---FEPDEIMWSSVLNAC 631
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 266/470 (56%), Gaps = 4/470 (0%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPT-SYSFSSLVKACT 121
A F M N + + A++ +++M + G V S + + + KAC
Sbjct: 227 ARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACR 286
Query: 122 LLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTT 181
+ G +HG V + + +F+ +L+ YS LG G+A+ VF M +D+ +W +
Sbjct: 287 DFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNS 346
Query: 182 MISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNI-ECAEILFNRMPCKDVIS 240
+I+ V+ ++ A LF++MP ++ +W MI G++ G I +C E LF MP KD I+
Sbjct: 347 LITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVE-LFGMMPEKDNIT 405
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
WT +++ + N + + + FH+M+ + + P+ ++V+SA A L L G ++H ++
Sbjct: 406 WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALK 360
D+ + +SL+ MY KCG+ + + +F + N+ +N+MI G + +G+ K+ALK
Sbjct: 466 KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALK 525
Query: 361 MFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLL 420
+FS +E G PNGVTF+++L+AC H G+V+ G F SM Y I PG +HY CMVDLL
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLL 585
Query: 421 SKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYS 480
+ GL++DA +I M +P+S +WG+LLS K H +++A +A + L+ LEP ++ Y
Sbjct: 586 GRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYV 645
Query: 481 LLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASD 530
+L +Y+ + + ++ +I K ++K PGSSW+ + ++H F A D
Sbjct: 646 VLSQLYSIIGKNRDCDRIMNIKKSKRIKKD-PGSSWIILKGEVHNFLAGD 694
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 145/308 (47%), Gaps = 15/308 (4%)
Query: 150 TLVEFYSMLGLAGDARKVFDEMPE--RDAFAWTTMISAHVRCGEVDSAARLFDEMPERNS 207
T++ + G +A ++ E P RD+ A ++S ++R G+ + A R+F M +
Sbjct: 149 TMITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEV 208
Query: 208 ATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSR 267
+ ++M+ GY K G I A LF+RM ++VI+WT ++ Y + F D LF M
Sbjct: 209 VSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQE 268
Query: 268 G-LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDR 326
G + + + + AC G ++H + D+++G+SL+ MY+K G +
Sbjct: 269 GDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGE 328
Query: 327 SLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
+ VF ++ K+ WNS+I GL EA ++F +M K + V++ ++ +
Sbjct: 329 AKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDM----VSWTDMIKGFSG 384
Query: 387 AGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE---PNSF 443
G + + F M E I+ + M+ G E+AL M + PNS+
Sbjct: 385 KGEISKCVELFGMMPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSY 439
Query: 444 IWGALLSG 451
+ ++LS
Sbjct: 440 TFSSVLSA 447
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 140/291 (48%), Gaps = 10/291 (3%)
Query: 163 DARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSG- 221
+A +F +M R +W MISA+ G++ A ++FDEMP R + ++NAMI K+
Sbjct: 68 EAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKC 127
Query: 222 NIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVIS 281
++ A LF +P K+ +S+ T++T + R RF + L+ E + D VA ++S
Sbjct: 128 DLGKAYELFCDIPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVK--FRDSVASNVLLS 185
Query: 282 ACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFC 341
G V + V +V SS++ Y K G I + +F ++ +N+
Sbjct: 186 GYLRAGKWNEAVRVFQGMAVK----EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVIT 241
Query: 342 WNSMIDGLATHGYAKEALKMFSEMERKG-IRPNGVTFVSVLTACTHAGFVEEGRSRFVSM 400
W +MIDG G+ ++ +F M ++G ++ N T + AC EG S+ +
Sbjct: 242 WTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREG-SQIHGL 300
Query: 401 IEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
+ + + ++ + SK G + +A + + G+ +S W +L++G
Sbjct: 301 VSRMPLEFDLFLGNSLMSMYSKLGYMGEA-KAVFGVMKNKDSVSWNSLITG 350
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 4/178 (2%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
I+ F M + + + A++ V +AL + KML+ V P SY+FSS++ A
Sbjct: 388 ISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAW 179
L D G +HG V K + VQ +LV Y G DA K+F + E + ++
Sbjct: 448 TASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSY 507
Query: 180 TTMISAHVRCGEVDSAARLFDEM----PERNSATWNAMIDGYAKSGNIECAEILFNRM 233
TMIS + G A +LF + E N T+ A++ G ++ F M
Sbjct: 508 NTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 176/568 (30%), Positives = 290/568 (51%), Gaps = 77/568 (13%)
Query: 5 QHCKIHTL--KDKILDQIKRC-SKREKKTLESVYANMIKTNANQDSFLMNQFIAACT--- 58
+H KI T+ ++ IL I +C S RE L + A IK++ SF+ + I CT
Sbjct: 20 KHSKIDTVNTQNPIL-LISKCNSLRE---LMQIQAYAIKSHIEDVSFVA-KLINFCTESP 74
Query: 59 ---TINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSS 115
+++ A H F M P+ +++N++ R + + +V++L +G++P +Y+F S
Sbjct: 75 TESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPS 134
Query: 116 LVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD 175
L+KAC + G+ +H K G D +V+V TL+ Y+
Sbjct: 135 LLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYT------------------- 175
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPC 235
C +VDSA +FD + E PC
Sbjct: 176 ------------ECEDVDSARCVFDRIVE-----------------------------PC 194
Query: 236 KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEV 295
V+ + ++T Y+R R + ++LF EM + L P+E+ + +V+S+CA LG+L LGK +
Sbjct: 195 --VVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI 252
Query: 296 HHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYA 355
H Y + F V + ++LIDM+AKCGS+D ++ +F K++ K+ W++MI A HG A
Sbjct: 253 HKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKA 312
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGC 415
++++ MF M + ++P+ +TF+ +L AC+H G VEEGR F M+ + I P I+HYG
Sbjct: 313 EKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGS 372
Query: 416 MVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSN 475
MVDLLS+ G +EDA E I + P +W LL+ C H NL++A + + L+ S+
Sbjct: 373 MVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSH 432
Query: 476 SGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTS 535
G Y +L N+YA +W+ V +R MKD K PG S +E+N +H F + D ++
Sbjct: 433 GGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKV-PGCSSIEVNNVVHEFFSGDGVKSA 491
Query: 536 YGHVNXXXXXXXXXXXXAGYVPELGSIL 563
++ +GYVP+ ++
Sbjct: 492 TTKLHRALDEMVKELKLSGYVPDTSMVV 519
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 296 bits (758), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 174/544 (31%), Positives = 273/544 (50%), Gaps = 60/544 (11%)
Query: 55 AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFS 114
A C + A F + +N N YNA++ +AL + +++ +G+ S S
Sbjct: 327 AKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLS 386
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
+ +AC L+ + G ++G K V V ++ Y +A +VFDEM R
Sbjct: 387 GVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRR 446
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEM------PER----------------------- 205
DA +W +I+AH + G+ LF M P+
Sbjct: 447 DAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHS 506
Query: 206 ---------NSATWNAMIDGYAKSGNIECAEILFNR----------------MPCKDV-- 238
NS+ ++ID Y+K G IE AE + +R M K +
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 566
Query: 239 --ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVH 296
+SW ++++ Y ++ D LF M+ G+ PD+ TV+ CA+L + GLGK++H
Sbjct: 567 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 626
Query: 297 HYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAK 356
++ DVYI S+L+DMY+KCG + S L+F K ++ WN+MI G A HG +
Sbjct: 627 AQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGE 686
Query: 357 EALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCM 416
EA+++F M + I+PN VTF+S+L AC H G +++G F M DY + P + HY M
Sbjct: 687 EAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNM 746
Query: 417 VDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHR-NLEIANVAVQNLMILEPSN 475
VD+L K G ++ ALE+IR M FE + IW LL C +HR N+E+A A L+ L+P +
Sbjct: 747 VDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQD 806
Query: 476 SGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTS 535
S Y+LL N+YA+ W++VS +R M+ ++K PG SWVE+ ++H+F D H
Sbjct: 807 SSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKE-PGCSWVELKDELHVFLVGDKAHPR 865
Query: 536 YGHV 539
+ +
Sbjct: 866 WEEI 869
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 106/407 (26%), Positives = 197/407 (48%), Gaps = 43/407 (10%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F+ M + + +N++L + S +++ +V M R G+ +F+ ++K C+
Sbjct: 133 ANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSF 192
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
L D++ G +HG V + G D V + L++ Y+ ++ +VF +PE+++ +W+ +
Sbjct: 193 LEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAI 252
Query: 183 ISAHVRCGEVDSAARLFDEMPERNSATWN------------------------------- 211
I+ V+ + A + F EM + N+
Sbjct: 253 IAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDF 312
Query: 212 --------AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHE 263
A +D YAK N++ A+ILF+ + S+ ++T YS+ + + LFH
Sbjct: 313 AADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHR 372
Query: 264 MVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGS 323
++S GL DE++++ V ACA + L G +++ + + LDV + ++ IDMY KC +
Sbjct: 373 LMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQA 432
Query: 324 IDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTA 383
+ + VF +++ ++ WN++I +G E L +F M R I P+ TF S+L A
Sbjct: 433 LAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKA 492
Query: 384 CTHAGFVEEGRSRFVSMIEDYCISPGIEHYGC-MVDLLSKGGLIEDA 429
CT G + G S+++ S GC ++D+ SK G+IE+A
Sbjct: 493 CT-GGSLGYGMEIHSSIVKSGMASNS--SVGCSLIDMYSKCGMIEEA 536
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 129/281 (45%), Gaps = 33/281 (11%)
Query: 104 NGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGD 163
N V T++SF + K C GK H H+ GF FV L++ Y+
Sbjct: 44 NSVSTTNFSF--VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYT------- 94
Query: 164 ARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNI 223
RD SA+ +FD+MP R+ +WN MI+GY+KS ++
Sbjct: 95 --------NSRDFV----------------SASMVFDKMPLRDVVSWNKMINGYSKSNDM 130
Query: 224 ECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISAC 283
A FN MP +DV+SW ++++ Y +N + +F +M G+ D ++ C
Sbjct: 131 FKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVC 190
Query: 284 AHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWN 343
+ L LG ++H ++ G DV S+L+DMYAK SL VF + KN W+
Sbjct: 191 SFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWS 250
Query: 344 SMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
++I G + ALK F EM++ + + SVL +C
Sbjct: 251 AIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSC 291
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 118/248 (47%), Gaps = 47/248 (18%)
Query: 279 VISACAHLGALGLGKEVHHYLMVNGFG---------LDVYIGS----------------- 312
V CA GAL LGK+ H +++++GF L VY S
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 313 -----SLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMER 367
+I+ Y+K + ++ F + V+++ WNSM+ G +G + +++++F +M R
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 368 KGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPG----IEHYGCMVDLLSKG 423
+GI +G TF +L C+ F+E+ + I + G + ++D+ +KG
Sbjct: 174 EGIEFDGRTFAIILKVCS---FLED--TSLGMQIHGIVVRVGCDTDVVAASALLDMYAKG 228
Query: 424 GLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLV 483
++L + +G+ E NS W A+++GC + NL ++A++ ++ N+G
Sbjct: 229 KRFVESLRVFQGIP-EKNSVSWSAIIAGC-VQNNL--LSLALKFFKEMQKVNAGVSQ--- 281
Query: 484 NMYAEVNR 491
++YA V R
Sbjct: 282 SIYASVLR 289
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/502 (32%), Positives = 260/502 (51%), Gaps = 42/502 (8%)
Query: 102 LRNGVVPTSYSF-SSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGL 160
L +P F ++L+K CT+ G+ VH H+ + F + + TL+ Y+ G
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGS 110
Query: 161 AGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------------------ 202
+ARKVF++MP+RD WTT+IS + + A F++M
Sbjct: 111 LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 203 --PER-------------------NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISW 241
ER N +A++D Y + G ++ A+++F+ + ++ +SW
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
L+ ++R + LF M+ G P + ++ AC+ G L GK VH Y++
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 302 NGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKM 361
+G L + G++L+DMYAK GSI + +F +L +++ WNS++ A HG+ KEA+
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 362 FSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLS 421
F EM R GIRPN ++F+SVLTAC+H+G ++EG + M +D I P HY +VDLL
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLG 409
Query: 422 KGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSL 481
+ G + AL I M EP + IW ALL+ C++H+N E+ A +++ L+P + G + +
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469
Query: 482 LVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNX 541
L N+YA RW + +++R MK+ GV+K P SWVEI IH+F A+D H +
Sbjct: 470 LYNIYASGGRWNDAARVRKKMKESGVKKE-PACSWVEIENAIHMFVANDERHPQREEIAR 528
Query: 542 XXXXXXXXXXXAGYVPELGSIL 563
GYVP+ ++
Sbjct: 529 KWEEVLAKIKELGYVPDTSHVI 550
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 168/362 (46%), Gaps = 43/362 (11%)
Query: 34 VYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHR 90
V+A+++++ D + N + A C ++ A F M + + + L+ R
Sbjct: 82 VHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDR 141
Query: 91 SHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTT 150
AL + +MLR G P ++ SS++KA G +HG K GFD++V V +
Sbjct: 142 PCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSA 201
Query: 151 LVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------PE 204
L++ Y+ GL DA+ VFD + R+ +W +I+ H R + A LF M P
Sbjct: 202 LLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPS 261
Query: 205 RNS----------------ATW-----------------NAMIDGYAKSGNIECAEILFN 231
S W N ++D YAKSG+I A +F+
Sbjct: 262 HFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFD 321
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
R+ +DV+SW +L+T Y+++ + V F EM G+ P+E++ +V++AC+H G L
Sbjct: 322 RLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDE 381
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLA 350
G + + +G + + +++D+ + G ++R+L ++ ++ W ++++
Sbjct: 382 GWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACR 441
Query: 351 TH 352
H
Sbjct: 442 MH 443
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 281/548 (51%), Gaps = 41/548 (7%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDNPNALVYNALLRTCVHC 88
+ ++A +IK D ++ N I+ + A A F M + + +N+++ +
Sbjct: 150 KKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLAL 209
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGH-VWKRGFDAHVFV 147
+L + +ML+ G P +S S + AC+ + GK +H H V R V V
Sbjct: 210 GDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMV 269
Query: 148 QTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNS 207
T++++ YS G A ++F+ M +R+ AW MI + R G V A F +M E+N
Sbjct: 270 MTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNG 329
Query: 208 ATWN------------------------------------AMIDGYAKSGNIECAEILFN 231
+ A+ID Y + G ++ AE++F+
Sbjct: 330 LQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFD 389
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
RM K+VISW +++ Y +N + + LF E+ L PD + +++ A A +L
Sbjct: 390 RMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSE 449
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
G+E+H Y++ + + + I +SL+ MYA CG ++ + F + +K++ WNS+I A
Sbjct: 450 GREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAV 509
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIE 411
HG+ + ++ +FSEM + PN TF S+L AC+ +G V+EG F SM +Y I PGIE
Sbjct: 510 HGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIE 569
Query: 412 HYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMIL 471
HYGCM+DL+ + G A + M F P + IWG+LL+ + H+++ IA A + + +
Sbjct: 570 HYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKM 629
Query: 472 EPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDN 531
E N+G Y LL+NMYAE RW++V++I++ M+ G+ +T S+ VE K H+F D
Sbjct: 630 EHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRST-VEAKGKSHVFTNGDR 688
Query: 532 YHTSYGHV 539
H + +
Sbjct: 689 SHVATNKI 696
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 183/373 (49%), Gaps = 45/373 (12%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F M+ +A ++N +++ C +A+ Y +M+ GV ++++ ++K+
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
+ GK +H V K GF + V+V +L+ Y LG A DA KVF+EMPERD +W +M
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 183 ISAHVRCGEVDSAARLFDEM------PERNSA---------------------------- 208
IS ++ G+ S+ LF EM P+R S
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 209 ------TWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFH 262
+++D Y+K G + AE +FN M +++++W ++ CY+RN R D F
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 263 EMVSR-GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKC 321
+M + GL PD + ++ A A L G+ +H Y M GF + + ++LIDMY +C
Sbjct: 323 KMSEQNGLQPDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 322 GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
G + + ++F ++ KN+ WNS+I +G AL++F E+ + P+ T S+L
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 382 TACTHAGFVEEGR 394
A + + EGR
Sbjct: 439 PAYAESLSLSEGR 451
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 115/247 (46%), Gaps = 2/247 (0%)
Query: 206 NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
N + G+A S +E A LF+ M D W ++ ++ + + V + MV
Sbjct: 63 NDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMV 122
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
G+ D VI + A + +L GK++H ++ GF DVY+ +SLI +Y K G
Sbjct: 123 FAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAW 182
Query: 326 RSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACT 385
+ VF ++ +++ WNSMI G G +L +F EM + G +P+ + +S L AC+
Sbjct: 183 DAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS 242
Query: 386 HAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIW 445
H + G+ + + + ++D+ SK G + A + GM + N W
Sbjct: 243 HVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-IQRNIVAW 301
Query: 446 GALLSGC 452
++ GC
Sbjct: 302 NVMI-GC 307
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/509 (32%), Positives = 268/509 (52%), Gaps = 66/509 (12%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
++ + L+R + + + Y+ M +G+ P+S++ +S+++AC + + GK +H
Sbjct: 68 DSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIH 127
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLG-----------------------LAG-------- 162
K G V+VQT LV YS LG L G
Sbjct: 128 AQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELD 187
Query: 163 DARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLF----------------------- 199
+AR+VFD++PE+DA +W +IS++ + G++ +A LF
Sbjct: 188 EARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCRE 247
Query: 200 --------DEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRN 251
D MP++N +W MI GY K G+++ AE LF M KD + + ++ CY++N
Sbjct: 248 MKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQN 307
Query: 252 KRFGDVVTLFHEMVSRG--LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVY 309
+ D + LF +M+ R + PDE+ +++V+SA + LG G V Y+ +G +D
Sbjct: 308 GKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDL 367
Query: 310 IGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG 369
+ +SLID+Y K G ++ +F L K+ +++MI G +G A EA +F+ M K
Sbjct: 368 LSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKK 427
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDA 429
I PN VTF +L+A +H+G V+EG F SM +D+ + P +HYG MVD+L + G +E+A
Sbjct: 428 IPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEA 486
Query: 430 LEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEV 489
E+I+ M +PN+ +WGALL LH N+E +A + + LE +GY S L +Y+ V
Sbjct: 487 YELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSV 546
Query: 490 NRWKEVSKIRIAMKDLGVEKTCPGSSWVE 518
RW + +R ++K+ + KT G SWVE
Sbjct: 547 GRWDDARTVRDSIKEKKLCKTL-GCSWVE 574
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 178/571 (31%), Positives = 294/571 (51%), Gaps = 54/571 (9%)
Query: 20 IKRCSKREKK-TLESVYANMIKTNANQDS-----FLMNQFIAACTTINLATHAFSHMDNP 73
++RC++R+ + + ++ M++ DS L+N + A C + A F +
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMY-AKCGLMRRAVLVFGGSER- 124
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
+ YNAL+ V A+ Y +M NG++P Y+F SL+K M+ + K VH
Sbjct: 125 DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDA-MELSDVKKVH 183
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD-AFAWTTMISAHVRCGEV 192
G +K GFD+ +V + LV YS DA+KVFDE+P+RD + W +++ + +
Sbjct: 184 GLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRF 243
Query: 193 DSAARLFDEMPE------RNSATW---------------------------------NAM 213
+ A +F +M E R++ T NA+
Sbjct: 244 EDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNAL 303
Query: 214 IDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDE 273
ID Y KS +E A +F M +D+ +W +++ + + LF M+ G+ PD
Sbjct: 304 IDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGIRPDI 363
Query: 274 VAMTTVISACAHLGALGLGKEVHHYLMVNGF----GLDVYIGSSLIDMYAKCGSIDRSLL 329
V +TTV+ C L +L G+E+H Y++V+G + +I +SL+DMY KCG + + +
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 330 VFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGF 389
VF ++VK+ WN MI+G + AL MFS M R G++P+ +TFV +L AC+H+GF
Sbjct: 424 VFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGF 483
Query: 390 VEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALL 449
+ EGR+ M Y I P +HY C++D+L + +E+A E+ N +W ++L
Sbjct: 484 LNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSIL 543
Query: 450 SGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEK 509
S C+LH N ++A VA + L LEP + G Y L+ N+Y E +++EV +R AM+ V+K
Sbjct: 544 SSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKK 603
Query: 510 TCPGSSWVEINQKIHLFAASDNYHTSYGHVN 540
T PG SW+ + +H F + H + ++
Sbjct: 604 T-PGCSWIVLKNGVHTFFTGNQTHPEFKSIH 633
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 292 bits (748), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 181/581 (31%), Positives = 271/581 (46%), Gaps = 66/581 (11%)
Query: 34 VYANMIKT-NANQDSFLMNQFIAACTTINLATHAFSHMDNP-------------NALVYN 79
V+A ++KT ++ FL N I + +S +D+P N + +
Sbjct: 28 VHARIVKTLDSPPPPFLANYLI----------NMYSKLDHPESARLVLRLTPARNVVSWT 77
Query: 80 ALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKR 139
+L+ AL + +M R GVVP ++F KA L GK +H K
Sbjct: 78 SLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKC 137
Query: 140 GFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLF 199
G VFV + + Y L DARK+FDE+PER+ W IS V G A F
Sbjct: 138 GRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAF 197
Query: 200 DEMPE----RNSATW-----------------------------------NAMIDGYAKS 220
E NS T+ N +ID Y K
Sbjct: 198 IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKC 257
Query: 221 GNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVI 280
I +EI+F M K+ +SW +L+ Y +N L+ + + +++V+
Sbjct: 258 KQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVL 317
Query: 281 SACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLF 340
SACA + L LG+ +H + + +++GS+L+DMY KCG I+ S F ++ KNL
Sbjct: 318 SACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLV 377
Query: 341 CWNSMIDGLATHGYAKEALKMFSEMERKGI--RPNGVTFVSVLTACTHAGFVEEGRSRFV 398
NS+I G A G AL +F EM +G PN +TFVS+L+AC+ AG VE G F
Sbjct: 378 TRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD 437
Query: 399 SMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNL 458
SM Y I PG EHY C+VD+L + G++E A E I+ M +P +WGAL + C++H
Sbjct: 438 SMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKP 497
Query: 459 EIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVE 518
++ +A +NL L+P +SG + LL N +A RW E + +R +K +G++K G SW+
Sbjct: 498 QLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGA-GYSWIT 556
Query: 519 INQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPEL 559
+ ++H F A D H + AGY P+L
Sbjct: 557 VKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDL 597
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 164/559 (29%), Positives = 274/559 (49%), Gaps = 47/559 (8%)
Query: 49 LMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVP 108
L++ F+ + A F M N + + ++ C+ +A+ ++ M+ +G
Sbjct: 208 LIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFES 267
Query: 109 TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFY---SMLGLAGDAR 165
++ SS+ AC L + + GK +H + G V + +LV+ Y S G D R
Sbjct: 268 DKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDCR 325
Query: 166 KVFDEMPERDAFAWTTMISAHVR-CGEVDSAARLFDEMPER------------------- 205
KVFD M + +WT +I+ +++ C A LF EM +
Sbjct: 326 KVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN 385
Query: 206 ---------------------NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTL 244
NS+ N++I + KS +E A+ F + K+++S+ T
Sbjct: 386 LSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTF 445
Query: 245 MTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGF 304
+ RN F L E+ R L +++S A++G++ G+++H ++ G
Sbjct: 446 LDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGL 505
Query: 305 GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSE 364
+ + ++LI MY+KCGSID + VF ++ +N+ W SMI G A HG+A L+ F++
Sbjct: 506 SCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQ 565
Query: 365 MERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGG 424
M +G++PN VT+V++L+AC+H G V EG F SM ED+ I P +EHY CMVDLL + G
Sbjct: 566 MIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAG 625
Query: 425 LIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVN 484
L+ DA E I M F+ + +W L C++H N E+ +A + ++ L+P+ Y L N
Sbjct: 626 LLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSN 685
Query: 485 MYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXX 544
+YA +W+E +++R MK+ + K G SW+E+ KIH F D H + +
Sbjct: 686 IYACAGKWEESTEMRRKMKERNLVKE-GGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELD 744
Query: 545 XXXXXXXXAGYVPELGSIL 563
GYVP+ +L
Sbjct: 745 RLITEIKRCGYVPDTDLVL 763
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 232/518 (44%), Gaps = 59/518 (11%)
Query: 20 IKRCSK-REKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHA------FSHMDN 72
+K C + R+ + + V+A +I+ + DS L N I+ + + A
Sbjct: 69 LKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGK 128
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
+ + ++A++ + R A+ +V+ L G+VP Y ++++++AC+ G+
Sbjct: 129 RDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVT 188
Query: 133 HGHVWKRG-FDAHVFVQTTLVE-FYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCG 190
G + K G F++ V V +L++ F +A KVFD+M E + WT MI+ ++ G
Sbjct: 189 LGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMG 248
Query: 191 EVDSAARLFDEMP----ERNSATWN---------------------------------AM 213
A R F +M E + T + ++
Sbjct: 249 FPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVECSL 308
Query: 214 IDGYAK---SGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFG-DVVTLFHEMVSRG- 268
+D YAK G+++ +F+RM V+SWT L+T Y +N + + LF EM+++G
Sbjct: 309 VDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGH 368
Query: 269 LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSL 328
+ P+ ++ AC +L +GK+V G + + +S+I M+ K ++ +
Sbjct: 369 VEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQ 428
Query: 329 LVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAG 388
F L KNL +N+ +DG + ++A K+ SE+ + + + TF S+L+ + G
Sbjct: 429 RAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVG 488
Query: 389 FVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGAL 448
+ +G + S + +S ++ + SK G I+ A + M N W ++
Sbjct: 489 SIRKGE-QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME-NRNVISWTSM 546
Query: 449 LSGCKLH----RNLEIANVAVQNLMILEPSNSGYYSLL 482
++G H R LE N ++ ++P+ Y ++L
Sbjct: 547 ITGFAKHGFAIRVLETFNQMIEEG--VKPNEVTYVAIL 582
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 203/463 (43%), Gaps = 55/463 (11%)
Query: 101 MLRNGVVP-TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLG 159
M R+G+ P S +FSSL+K+C D GK VH + + + + +L+ YS G
Sbjct: 52 MARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSG 111
Query: 160 LAGDARKVFDEMP---ERDAFAWTTMISAHVRCGEVDSAARLFDEMPE----RNSATWNA 212
+ A VF+ M +RD +W+ M++ + G A ++F E E N + A
Sbjct: 112 DSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTA 171
Query: 213 ------------------------------------MIDGYAKSGN-IECAEILFNRMPC 235
+ID + K N E A +F++M
Sbjct: 172 VIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSE 231
Query: 236 KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEV 295
+V++WT ++T + + + F +MV G D+ +++V SACA L L LGK++
Sbjct: 232 LNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQL 291
Query: 296 HHYLMVNGFGLDVYIGSSLIDMYAKC---GSIDRSLLVFYKLQVKNLFCWNSMIDG-LAT 351
H + + +G DV SL+DMYAKC GS+D VF +++ ++ W ++I G +
Sbjct: 292 HSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN 349
Query: 352 HGYAKEALKMFSEMERKG-IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGI 410
A EA+ +FSEM +G + PN TF S AC + G+ + + ++
Sbjct: 350 CNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGK-QVLGQAFKRGLASNS 408
Query: 411 EHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMI 470
++ + K +EDA ++ E N + L G + N E A + +
Sbjct: 409 SVANSVISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 471 LEPSNSGY-YSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCP 512
E S + ++ L++ A V ++ +I + LG+ P
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQP 510
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 100/207 (48%), Gaps = 20/207 (9%)
Query: 258 VTLFHEMVSRGLAP-DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLID 316
V+ M G+ P D V ++++ +C LGK VH L+ D + +SLI
Sbjct: 46 VSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLIS 105
Query: 317 MYAKCGSIDRSLLVFYKLQ---VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
+Y+K G ++ VF ++ +++ W++M+ +G +A+K+F E G+ PN
Sbjct: 106 LYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPN 165
Query: 374 GVTFVSVLTACTHAGFVEEGRSRFVSMIE------DYCISPGIEHYGC-MVDLLSKG-GL 425
+ +V+ AC+++ FV GR +++ D C+ GC ++D+ KG
Sbjct: 166 DYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCV-------GCSLIDMFVKGENS 218
Query: 426 IEDALEMIRGMTFEPNSFIWGALLSGC 452
E+A ++ M+ E N W +++ C
Sbjct: 219 FENAYKVFDKMS-ELNVVTWTLMITRC 244
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 129/324 (39%), Gaps = 20/324 (6%)
Query: 28 KKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVH 87
K+ L + + +N++ + +++ F+ + + A AF + N + YN L
Sbjct: 393 KQVLGQAFKRGLASNSSVANSVISMFVKS-DRMEDAQRAFESLSEKNLVSYNTFLDGTCR 451
Query: 88 CHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
QA ++ + ++++F+SL+ + G+ +H V K G + V
Sbjct: 452 NLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPV 511
Query: 148 QTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER-- 205
L+ YS G A +VF+ M R+ +WT+MI+ + G F++M E
Sbjct: 512 CNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGV 571
Query: 206 --NSATWNAMIDGYAKSGNIECAEILFNRM-------PCKDVISWTTLMTCYSRNKRFGD 256
N T+ A++ + G + FN M P + + + C R G
Sbjct: 572 KPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLC-----RAGL 626
Query: 257 VVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK-EVHHYLMVNGFGLDVYIGSSLI 315
+ F + + D + T + AC LGK L ++ YI L
Sbjct: 627 LTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYI--QLS 684
Query: 316 DMYAKCGSIDRSLLVFYKLQVKNL 339
++YA G + S + K++ +NL
Sbjct: 685 NIYACAGKWEESTEMRRKMKERNL 708
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 292 bits (747), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 171/572 (29%), Positives = 286/572 (50%), Gaps = 43/572 (7%)
Query: 34 VYANMIKTNANQDSFLMNQFIAA---CTTINLATHAFSHMDNPNALVYNALLRTCVHCHR 90
+++ ++K + ++F+ I A C +++ A F + + +V+ ++ V
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 91 SHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTT 150
+L M G +P +Y+F + +KA L K VHG + K + V
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 151 LVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER----N 206
L++ Y+ LG DA KVF+EMP+ D W+ MI+ + G + A LF M E N
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 207 SATW-----------------------------------NAMIDGYAKSGNIECAEILFN 231
T NA+ID YAK ++ A LF
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
+ K+ +SW T++ Y G ++F E + ++ EV ++ + ACA L ++ L
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDL 467
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
G +VH + V + +SLIDMYAKCG I + VF +++ ++ WN++I G +T
Sbjct: 468 GVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYST 527
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIE 411
HG ++AL++ M+ + +PNG+TF+ VL+ C++AG +++G+ F SMI D+ I P +E
Sbjct: 528 HGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLE 587
Query: 412 HYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMIL 471
HY CMV LL + G ++ A+++I G+ +EP+ IW A+LS N E A + + ++ +
Sbjct: 588 HYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKI 647
Query: 472 EPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDN 531
P + Y L+ NMYA +W V+ IR +MK++GV+K PG SW+E +H F+ +
Sbjct: 648 NPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKE-PGLSWIEHQGDVHYFSVGLS 706
Query: 532 YHTSYGHVNXXXXXXXXXXXXAGYVPELGSIL 563
H +N AGYVP+ ++L
Sbjct: 707 DHPDMKLINGMLEWLNMKATRAGYVPDRNAVL 738
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 120/483 (24%), Positives = 216/483 (44%), Gaps = 57/483 (11%)
Query: 20 IKRC-SKREKKTLESVYANMIKTNANQDSF----LMNQFIAACTTINLATHAFSHMDNPN 74
++RC K + + ++++ +++K + D F L+N ++ A + A + F M N
Sbjct: 56 LRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKD-ALNLFDEMPERN 114
Query: 75 ALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHG 134
N T + + Y ++ R G + F+S +K L + +H
Sbjct: 115 ----NVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHS 170
Query: 135 HVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVD- 193
+ K G+D++ FV L+ YS+ G AR VF+ + +D W ++S +V G +
Sbjct: 171 PIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFED 230
Query: 194 -----SAARLFDEMPERNSATWN-----------------------------------AM 213
S R+ MP N+ T++ +
Sbjct: 231 SLKLLSCMRMAGFMP--NNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 214 IDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDE 273
+ Y + G++ A +FN MP DV+ W+ ++ + +N + V LF M + P+E
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNE 348
Query: 274 VAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYK 333
++++++ CA GLG+++H ++ GF LD+Y+ ++LID+YAKC +D ++ +F +
Sbjct: 349 FTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAE 408
Query: 334 LQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEG 393
L KN WN++I G G +A MF E R + VTF S L AC ++ G
Sbjct: 409 LSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLG 468
Query: 394 RSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM-TFEPNSFIWGALLSGC 452
I+ + + ++D+ +K G I+ A + M T + S W AL+SG
Sbjct: 469 VQVHGLAIKTNN-AKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVAS--WNALISGY 525
Query: 453 KLH 455
H
Sbjct: 526 STH 528
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 137/319 (42%), Gaps = 37/319 (11%)
Query: 104 NGVVP--TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLA 161
+ ++P S+++ ++++ C D + K +H + K+G +F L+ Y G
Sbjct: 41 DSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFD 100
Query: 162 GDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWN---------- 211
DA +FDEMPER+ ++ T+ + + +RL E E N +
Sbjct: 101 KDALNLFDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLD 160
Query: 212 -------------------------AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMT 246
A+I+ Y+ G+++ A +F + CKD++ W +++
Sbjct: 161 KAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVS 220
Query: 247 CYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL 306
CY N F D + L M G P+ T + A LGA K VH ++ + L
Sbjct: 221 CYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVL 280
Query: 307 DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEME 366
D +G L+ +Y + G + + VF ++ ++ W+ MI +G+ EA+ +F M
Sbjct: 281 DPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMR 340
Query: 367 RKGIRPNGVTFVSVLTACT 385
+ PN T S+L C
Sbjct: 341 EAFVVPNEFTLSSILNGCA 359
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 7/209 (3%)
Query: 32 ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
E ++ ++K + D ++ N I A C ++ A F+ + + N + +N ++ +
Sbjct: 368 EQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENL 427
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
+A + + + LRN V T +FSS + AC L G VHG K V V
Sbjct: 428 GEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVS 487
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER--- 205
+L++ Y+ G A+ VF+EM D +W +IS + G A R+ D M +R
Sbjct: 488 NSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCK 547
Query: 206 -NSATWNAMIDGYAKSGNIECAEILFNRM 233
N T+ ++ G + +G I+ + F M
Sbjct: 548 PNGLTFLGVLSGCSNAGLIDQGQECFESM 576
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 180/559 (32%), Positives = 273/559 (48%), Gaps = 46/559 (8%)
Query: 49 LMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVP 108
L+N + A C +I A F M + +++ +N+++ +A+ Y M R+ ++P
Sbjct: 355 LVNMY-AKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 109 TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF 168
S++ S + +C L + G+ +HG K G D +V V L+ Y+ G + RK+F
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 169 DEMPERDAFAWTTMISAHVRCGEVDSAARL----------------------------FD 200
MPE D +W ++I A R A + F
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG 533
Query: 201 EMPER------------NSATWNAMIDGYAKSGNIECAEILFNRMP-CKDVISWTTLMTC 247
E+ ++ + T NA+I Y K G ++ E +F+RM +D ++W ++++
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 248 YSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLD 307
Y N+ + L M+ G D TV+SA A + L G EVH + D
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 308 VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMER 367
V +GS+L+DMY+KCG +D +L F + V+N + WNSMI G A HG +EALK+F M+
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKL 713
Query: 368 KG-IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLI 426
G P+ VTFV VL+AC+HAG +EEG F SM + Y ++P IEH+ CM D+L + G +
Sbjct: 714 DGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGEL 773
Query: 427 EDALEMIRGMTFEPNSFIWGALLSGC--KLHRNLEIANVAVQNLMILEPSNSGYYSLLVN 484
+ + I M +PN IW +L C R E+ A + L LEP N+ Y LL N
Sbjct: 774 DKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGN 833
Query: 485 MYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXX 544
MYA RW+++ K R MKD V+K G SWV + +H+F A D H +
Sbjct: 834 MYAAGGRWEDLVKARKKMKDADVKKE-AGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLK 892
Query: 545 XXXXXXXXAGYVPELGSIL 563
AGYVP+ G L
Sbjct: 893 ELNRKMRDAGYVPQTGFAL 911
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 180/412 (43%), Gaps = 52/412 (12%)
Query: 35 YANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDNPNALVYNALLRTCVHCHRS 91
++ + K ++D +L N I A + A F M N + + ++
Sbjct: 24 HSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEH 83
Query: 92 HQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAA--GKTVHGHVWKRGFDAHVFVQT 149
+AL M++ G+ Y+F S+++AC + G+ +HG ++K + V
Sbjct: 84 KEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSN 143
Query: 150 TLVEFY-SMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSA 208
L+ Y +G G A F ++ +++ +W ++IS + + G+ SA R+F M S
Sbjct: 144 VLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSR 203
Query: 209 -----------------------------------------TWNAMIDGYAKSGNIECAE 227
+ ++ +AKSG++ A
Sbjct: 204 PTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYAR 263
Query: 228 ILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSR-GLAPDE-VAMTTVISACAH 285
+FN+M ++ ++ LM R K + LF +M S ++P+ V + + +
Sbjct: 264 KVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSL 323
Query: 286 LGALGL--GKEVHHYLMVNGF-GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCW 342
+GL G+EVH +++ G V IG+ L++MYAKCGSI + VFY + K+ W
Sbjct: 324 AEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSW 383
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGR 394
NSMI GL +G EA++ + M R I P T +S L++C + + G+
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQ 435
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 124/235 (52%), Gaps = 13/235 (5%)
Query: 196 ARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFG 255
+RL+ +++ N +I+ Y ++G+ A +F+ MP ++ +SW +++ YSRN
Sbjct: 25 SRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHK 84
Query: 256 DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL--GKEVHHYLMVNGFGLDVYIGSS 313
+ + +MV G+ ++ A +V+ AC +G++G+ G+++H + + +D + +
Sbjct: 85 EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNV 144
Query: 314 LIDMYAKC-GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRP 372
LI MY KC GS+ +L F ++VKN WNS+I + G + A ++FS M+ G RP
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 373 NGVTFVS-VLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLI 426
TF S V TAC+ + E R + I C I+ G + DL GL+
Sbjct: 205 TEYTFGSLVTTACS----LTEPDVRLLEQI--MCT---IQKSGLLTDLFVGSGLV 250
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 211/494 (42%), Gaps = 61/494 (12%)
Query: 23 CSKREK--KTLESVYANMIKTNANQDSFLMNQFIAA---CTTINLATHAFSHMDNPNALV 77
CS E + LE + + K+ D F+ + ++A +++ A F+ M+ NA+
Sbjct: 217 CSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVT 276
Query: 78 YNALLRTCVHCHRSHQALACYVKMLRN-GVVPTSY-----SFS--SLVKACTLLMDSAAG 129
N L+ V +A ++ M V P SY SF SL + L G
Sbjct: 277 LNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGL----KKG 332
Query: 130 KTVHGHVWKRGF-DAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVR 188
+ VHGHV G D V + LV Y+ G DAR+VF M ++D+ +W +MI+ +
Sbjct: 333 REVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQ 392
Query: 189 CG------EVDSAARLFDEMP---------------------------------ERNSAT 209
G E + R D +P + N +
Sbjct: 393 NGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSV 452
Query: 210 WNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKR-FGDVVTLFHEMVSRG 268
NA++ YA++G + +F+ MP D +SW +++ +R++R + V F G
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAG 512
Query: 269 LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSL 328
+ + ++V+SA + L LGK++H + N + ++LI Y KCG +D
Sbjct: 513 QKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCE 572
Query: 329 LVFYKL-QVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHA 387
+F ++ + ++ WNSMI G + +AL + M + G R + + +VL+A
Sbjct: 573 KIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASV 632
Query: 388 GFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGA 447
+E G + C+ + +VD+ SK G ++ AL M NS+ W +
Sbjct: 633 ATLERGMEVHACSVRA-CLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNS 690
Query: 448 LLSGCKLHRNLEIA 461
++SG H E A
Sbjct: 691 MISGYARHGQGEEA 704
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 174/393 (44%), Gaps = 47/393 (11%)
Query: 49 LMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVP 108
L++ + ++ A AF ++ N++ +N+++ A + M +G P
Sbjct: 145 LISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRP 204
Query: 109 TSYSFSSLVK-ACTLLM-DSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARK 166
T Y+F SLV AC+L D + + + K G +FV + LV ++ G ARK
Sbjct: 205 TEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARK 264
Query: 167 VFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------------------PERNSA 208
VF++M R+A ++ VR + A +LF +M PE + A
Sbjct: 265 VFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLA 324
Query: 209 --------------------------TWNAMIDGYAKSGNIECAEILFNRMPCKDVISWT 242
N +++ YAK G+I A +F M KD +SW
Sbjct: 325 EEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWN 384
Query: 243 TLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVN 302
+++T +N F + V + M + P + + +S+CA L LG+++H +
Sbjct: 385 SMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL 444
Query: 303 GFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLA-THGYAKEALKM 361
G L+V + ++L+ +YA+ G ++ +F + + WNS+I LA + EA+
Sbjct: 445 GIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 362 FSEMERKGIRPNGVTFVSVLTACTHAGFVEEGR 394
F +R G + N +TF SVL+A + F E G+
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELGK 537
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 166/386 (43%), Gaps = 53/386 (13%)
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
S V++C + A + H ++K D V++ L+ Y G + ARKVFDEMP R
Sbjct: 8 SFVQSC--VGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLR 65
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPER----------------------------- 205
+ +W ++S + R GE A +M +
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 206 ------------NSATWNAMIDGYAKS-GNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
++ N +I Y K G++ A F + K+ +SW ++++ YS+
Sbjct: 126 IHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG 185
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA--LGLGKEVHHYLMVNGFGLDVYI 310
+F M G P E ++++ L + L +++ + +G D+++
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFV 245
Query: 311 GSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGI 370
GS L+ +AK GS+ + VF +++ +N N ++ GL + +EA K+F +M I
Sbjct: 246 GSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM-I 304
Query: 371 RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHY-----GCMVDLLSKGGL 425
+ ++V +L++ EE + + + I+ G+ + +V++ +K G
Sbjct: 305 DVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGS 364
Query: 426 IEDALEMIRGMTFEPNSFIWGALLSG 451
I DA + MT + +S W ++++G
Sbjct: 365 IADARRVFYFMT-DKDSVSWNSMITG 389
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 160/386 (41%), Gaps = 48/386 (12%)
Query: 39 IKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRS-HQALAC 97
I N + + LM + A +N FS M + + +N+++ RS +A+ C
Sbjct: 446 IDLNVSVSNALMTLY-AETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVC 504
Query: 98 YVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSM 157
++ R G +FSS++ A + L GK +HG K + L+ Y
Sbjct: 505 FLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGK 564
Query: 158 LGLAGDARKVFDEMPE-RDAFAWTTMISAHV----------------RCGE--------- 191
G K+F M E RD W +MIS ++ + G+
Sbjct: 565 CGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYAT 624
Query: 192 ----VDSAARLFDEMP----------ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKD 237
S A L M E + +A++D Y+K G ++ A FN MP ++
Sbjct: 625 VLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRN 684
Query: 238 VISWTTLMTCYSRNKRFGDVVTLFHEMVSRG-LAPDEVAMTTVISACAHLGALGLGKEVH 296
SW ++++ Y+R+ + + + LF M G PD V V+SAC+H G L G + H
Sbjct: 685 SYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFK-H 743
Query: 297 HYLMVNGFGLDVYIG--SSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLA-TH 352
M + +GL I S + D+ + G +D+ K+ +K N+ W +++ +
Sbjct: 744 FESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRAN 803
Query: 353 GYAKEALKMFSEMERKGIRPNGVTFV 378
G E K +EM + N V +V
Sbjct: 804 GRKAELGKKAAEMLFQLEPENAVNYV 829
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 85/175 (48%), Gaps = 4/175 (2%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIA---ACTTINLATHAFSHM-DNPNALVYNALLRTCVH 87
+ ++ +K N ++ N IA C ++ FS M + + + +N+++ +H
Sbjct: 537 KQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIH 596
Query: 88 CHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
+AL ML+ G S+ +++++ A + G VH + ++ V V
Sbjct: 597 NELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVV 656
Query: 148 QTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM 202
+ LV+ YS G A + F+ MP R++++W +MIS + R G+ + A +LF+ M
Sbjct: 657 GSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETM 711
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 274 VAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYK 333
V ++ V S H GA + H L N DVY+ ++LI+ Y + G + VF +
Sbjct: 5 VPLSFVQSCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDE 61
Query: 334 LQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
+ ++N W ++ G + +G KEAL +M ++GI N FVSVL AC G V
Sbjct: 62 MPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 289 bits (740), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 163/476 (34%), Positives = 264/476 (55%), Gaps = 13/476 (2%)
Query: 53 FIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYS 112
F C + A F M + ++ C ++L + +M ++G+ ++
Sbjct: 60 FYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFI 119
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP 172
SL+KA L+D GK +H V K +++ F+ ++L++ YS G G+ARKVF ++
Sbjct: 120 VPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLG 179
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIE-CAE 227
E+D + MIS + + D A L +M + + TWNA+I G++ N E +E
Sbjct: 180 EQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHMRNEEKVSE 239
Query: 228 ILFNRMPC-----KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA 282
IL + C DV+SWT++++ N + F +M++ GL P+ + T++ A
Sbjct: 240 IL--ELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPA 297
Query: 283 CAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCW 342
C L + GKE+H Y +V G ++ S+L+DMY KCG I ++++F K K +
Sbjct: 298 CTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTF 357
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
NSMI A HG A +A+++F +ME G + + +TF ++LTAC+HAG + G++ F+ M
Sbjct: 358 NSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQN 417
Query: 403 DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIAN 462
Y I P +EHY CMVDLL + G + +A EMI+ M EP+ F+WGALL+ C+ H N+E+A
Sbjct: 418 KYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELAR 477
Query: 463 VAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVE 518
+A ++L LEP NSG LL ++YA W+ V +++ +K + GSSWVE
Sbjct: 478 IAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFL-GSSWVE 532
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
Query: 213 MIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPD 272
++ Y + G + A +F+ MP +D+ ++ +RN + + + F EM GL D
Sbjct: 57 LVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKDGLKLD 116
Query: 273 EVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFY 332
+ +++ A +L GK +H ++ + D +I SSLIDMY+K G + + VF
Sbjct: 117 AFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFS 176
Query: 333 KLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEE 392
L ++L +N+MI G A + A EAL + +M+ GI+P+ +T+ ++++ +H
Sbjct: 177 DLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSHM----R 232
Query: 393 GRSRFVSMIEDYCIS---PGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWG 446
+ ++E C+ P + + ++ L E A + + M PNS
Sbjct: 233 NEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGLYPNSATII 292
Query: 447 ALLSGC 452
LL C
Sbjct: 293 TLLPAC 298
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 288 bits (738), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 169/555 (30%), Positives = 276/555 (49%), Gaps = 45/555 (8%)
Query: 28 KKTLESVYANMIKT-NANQDSFLMNQFIAACTTINLATHA---FSHMDNPNALVYNALLR 83
K+ + ++A +I T N S + IA+C I ++A F + VYN+++
Sbjct: 30 KRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIV 89
Query: 84 TCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDA 143
+ L Y +M+ + P S +F+ +KAC + G+ V G+
Sbjct: 90 VYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKN 149
Query: 144 HVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP 203
VFV ++++ Y G +A +F +M +RD WTTM++ + G+ A + EM
Sbjct: 150 DVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQ 209
Query: 204 ER---------------------------------------NSATWNAMIDGYAKSGNIE 224
N +++D YAK G IE
Sbjct: 210 NEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269
Query: 225 CAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACA 284
A +F+RM K +SW +L++ +++N EM S G PD V + V+ AC+
Sbjct: 270 VASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACS 329
Query: 285 HLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNS 344
+G+L G+ VH Y++ LD ++L+DMY+KCG++ S +F + K+L CWN+
Sbjct: 330 QVGSLKTGRLVHCYILKRHV-LDRVTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNT 388
Query: 345 MIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDY 404
MI HG +E + +F +M I P+ TF S+L+A +H+G VE+G+ F MI Y
Sbjct: 389 MISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKY 448
Query: 405 CISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVA 464
I P +HY C++DLL++ G +E+AL+MI + IW ALLSGC HRNL + ++A
Sbjct: 449 KIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSVGDIA 508
Query: 465 VQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIH 524
++ L P + G +L+ N +A N+WKEV+K+R M++ +EK PG S +E+N ++
Sbjct: 509 ANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKV-PGYSAIEVNGELR 567
Query: 525 LFAASDNYHTSYGHV 539
F D H + H+
Sbjct: 568 TFLMEDLSHHEHYHM 582
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 288 bits (737), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 168/544 (30%), Positives = 286/544 (52%), Gaps = 43/544 (7%)
Query: 32 ESVYANMIKTNANQDS-FLMNQFIA---ACTTINLATHAFSHMDNPNALVYNALLRTCVH 87
+ ++A+++K++ + ++ N IA C + A M+N + + +N+L++ V
Sbjct: 304 KEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQ 363
Query: 88 CHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
+AL + M+ G S +S++ A L + AG +H +V K G+D+++ V
Sbjct: 364 NLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQV 423
Query: 148 QTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER-- 205
TL++ YS L + F M ++D +WTT+I+ + + A LF ++ ++
Sbjct: 424 GNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRM 483
Query: 206 ------------------------------------NSATWNAMIDGYAKSGNIECAEIL 229
++ N ++D Y K N+ A +
Sbjct: 484 EIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGYATRV 543
Query: 230 FNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGAL 289
F + KDV+SWT++++ + N + V LF MV GL+ D VA+ ++SA A L AL
Sbjct: 544 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSAL 603
Query: 290 GLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGL 349
G+E+H YL+ GF L+ I +++DMYA CG + + VF +++ K L + SMI+
Sbjct: 604 NKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAY 663
Query: 350 ATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPG 409
HG K A+++F +M + + P+ ++F+++L AC+HAG ++EGR M +Y + P
Sbjct: 664 GMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPW 723
Query: 410 IEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLM 469
EHY C+VD+L + + +A E ++ M EP + +W ALL+ C+ H EI +A Q L+
Sbjct: 724 PEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLL 783
Query: 470 ILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAAS 529
LEP N G L+ N++AE RW +V K+R MK G+EK PG SW+E++ K+H F A
Sbjct: 784 ELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKH-PGCSWIEMDGKVHKFTAR 842
Query: 530 DNYH 533
D H
Sbjct: 843 DKSH 846
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 174/370 (47%), Gaps = 41/370 (11%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSL 116
C +++ A F M + A +N ++ V ALA Y M GV SF +L
Sbjct: 129 CGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPAL 188
Query: 117 VKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER-D 175
+KAC L D +G +H + K G+ + F+ LV Y+ AR++FD E+ D
Sbjct: 189 LKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGD 248
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEM----PERNSATW--------------------- 210
A W +++S++ G+ LF EM P NS T
Sbjct: 249 AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 308
Query: 211 ---------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFG 255
NA+I Y + G + AE + +M DV++W +L+ Y +N +
Sbjct: 309 SVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYK 368
Query: 256 DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLI 315
+ + F +M++ G DEV+MT++I+A L L G E+H Y++ +G+ ++ +G++LI
Sbjct: 369 EALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLI 428
Query: 316 DMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGV 375
DMY+KC F ++ K+L W ++I G A + EAL++F ++ +K + + +
Sbjct: 429 DMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEM 488
Query: 376 TFVSVLTACT 385
S+L A +
Sbjct: 489 ILGSILRASS 498
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 149/315 (47%), Gaps = 44/315 (13%)
Query: 112 SFSSLVKACTLLMDSAAGKTVHGHVWKR--GFDAHVFVQTTLVEFYSMLGLAGDARKVFD 169
+F+ +++ C + G+ +H ++K F+ F+ LV Y G DA KVFD
Sbjct: 82 AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 170 EMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------------PERNSA--------- 208
EMP+R AFAW TMI A+V GE SA L+ M P A
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 209 ------------------TWNAMIDGYAKSGNIECAEILFNRMPCK-DVISWTTLMTCYS 249
NA++ YAK+ ++ A LF+ K D + W ++++ YS
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 250 RNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVH-HYLMVNGFGLDV 308
+ + + + LF EM G AP+ + + ++AC LGKE+H L + ++
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 309 YIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
Y+ ++LI MY +CG + ++ + ++ ++ WNS+I G + KEAL+ FS+M
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 369 GIRPNGVTFVSVLTA 383
G + + V+ S++ A
Sbjct: 381 GHKSDEVSMTSIIAA 395
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 120/257 (46%), Gaps = 14/257 (5%)
Query: 217 YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAM 276
Y K G+++ AE +F+ MP + +W T++ Y N + L+ M G+ +
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 277 TTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV 336
++ ACA L + G E+H L+ G+ +I ++L+ MYAK + + +F Q
Sbjct: 186 PALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 337 K-NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS 395
K + WNS++ +T G + E L++F EM G PN T VS LTAC + + G+
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 396 RFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
S+++ S + ++ + ++ G + A ++R M + W +L+ G
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMN-NADVVTWNSLIKG---- 360
Query: 456 RNLEIANVAVQNLMILE 472
VQNLM E
Sbjct: 361 --------YVQNLMYKE 369
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 39/282 (13%)
Query: 265 VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVN--GFGLDVYIGSSLIDMYAKCG 322
VS +P E A V+ C A+ G+++H + F LD ++ L+ MY KCG
Sbjct: 73 VSENNSPVE-AFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCG 130
Query: 323 SIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLT 382
S+D + VF ++ + F WN+MI ++G AL ++ M +G+ +F ++L
Sbjct: 131 SLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLK 190
Query: 383 ACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLL----SKGGLIEDALEMIRGMTF 438
AC + G S + + G G +V+ L +K + A + G
Sbjct: 191 ACAKLRDIRSG-----SELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQE 245
Query: 439 EPNSFIWGALLSGCKLH-RNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSK 497
+ ++ +W ++LS ++LE + + M NS Y+++ + A
Sbjct: 246 KGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNS--YTIVSALTA---------- 293
Query: 498 IRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHV 539
C G S+ ++ ++IH + H+S +V
Sbjct: 294 -------------CDGFSYAKLGKEIHASVLKSSTHSSELYV 322
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/469 (33%), Positives = 244/469 (52%), Gaps = 33/469 (7%)
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDS 126
F M + + +N ++ H+AL Y + R+G+ +SF+ L+ AC
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 127 AAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAH 186
+ HG V GF ++V + ++++ Y+
Sbjct: 196 QLNRQAHGQVLVAGFLSNVVLSCSIIDAYA------------------------------ 225
Query: 187 VRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMT 246
+CG+++SA R FDEM ++ W +I GYAK G++E AE LF MP K+ +SWT L+
Sbjct: 226 -KCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIA 284
Query: 247 CYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL 306
Y R + LF +M++ G+ P++ ++ + A A + +L GKE+H Y++
Sbjct: 285 GYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRP 344
Query: 307 DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATHGYAKEALKMFSEM 365
+ + SSLIDMY+K GS++ S VF K + WN+MI LA HG +AL+M +M
Sbjct: 345 NAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDM 404
Query: 366 ERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGL 425
+ ++PN T V +L AC+H+G VEEG F SM + I P EHY C++DLL + G
Sbjct: 405 IKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGC 464
Query: 426 IEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNM 485
++ + I M FEP+ IW A+L C++H N E+ A L+ L+P +S Y LL ++
Sbjct: 465 FKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSI 524
Query: 486 YAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHT 534
YA+ +W+ V K+R MK V K SW+EI +K+ F SD H
Sbjct: 525 YADHGKWELVEKLRGVMKKRRVNKE-KAVSWIEIEKKVEAFTVSDGSHA 572
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 144/305 (47%), Gaps = 32/305 (10%)
Query: 182 MISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISW 241
+I +++CG+ A ++FD+M RN +WN M+ GY KSG + A ++F+ MP +DV+SW
Sbjct: 88 LIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSW 147
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
T++ Y+++ + + + E G+ +E + +++AC L L ++ H ++V
Sbjct: 148 NTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV 207
Query: 302 NGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKM 361
GF +V + S+ID YAKCG ++ + F ++ VK++ W ++I G A G + A K+
Sbjct: 208 AGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKL 267
Query: 362 FSEMERK-------------------------------GIRPNGVTFVSVLTACTHAGFV 390
F EM K G++P TF S L A +
Sbjct: 268 FCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASL 327
Query: 391 EEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLS 450
G+ MI + P ++D+ SK G +E + + R + + W ++S
Sbjct: 328 RHGKEIHGYMIRTN-VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMIS 386
Query: 451 GCKLH 455
H
Sbjct: 387 ALAQH 391
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 103/242 (42%), Gaps = 36/242 (14%)
Query: 243 TLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVN 302
+ ++ ++ V+ + +G+ + +++ C +L GK +H +L +
Sbjct: 16 SFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKIT 75
Query: 303 GFGL-DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATH--------- 352
GF + + + LI MY KCG + VF ++ ++NL+ WN+M+ G
Sbjct: 76 GFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVV 135
Query: 353 -----------------GYAK-----EALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
GYA+ EAL + E R GI+ N +F +LTAC + +
Sbjct: 136 FDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQL 195
Query: 391 EEGRSRFVSMIEDYCISPGIEHYGC-MVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALL 449
+ R ++ +S + C ++D +K G +E A MT + + IW L+
Sbjct: 196 QLNRQAHGQVLVAGFLSNVV--LSCSIIDAYAKCGQMESAKRCFDEMTVK-DIHIWTTLI 252
Query: 450 SG 451
SG
Sbjct: 253 SG 254
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 106/248 (42%), Gaps = 13/248 (5%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F M N + + AL+ V ++AL + KM+ GV P ++FSS + A
Sbjct: 264 AEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASAS 323
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER-DAFAWTT 181
+ GK +HG++ + + V ++L++ YS G + +VF ++ D W T
Sbjct: 324 IASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNT 383
Query: 182 MISAHVRCGEVDSAARLFDEM----PERNSATWNAMIDGYAKSGNIECAEILFNRMPCK- 236
MISA + G A R+ D+M + N T +++ + SG +E F M +
Sbjct: 384 MISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQH 443
Query: 237 ----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLG 292
D + L+ R F +++ EM PD+ ++ C G LG
Sbjct: 444 GIVPDQEHYACLIDLLGRAGCFKELMRKIEEM---PFEPDKHIWNAILGVCRIHGNEELG 500
Query: 293 KEVHHYLM 300
K+ L+
Sbjct: 501 KKAADELI 508
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 170/547 (31%), Positives = 275/547 (50%), Gaps = 47/547 (8%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAA---CTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
+ ++A++++ D+ LMN I + C + A F+ M N N + + LL
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
+A+ + M + G+ P Y+ SS++ +C L G VH + K +V
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCG---EVDSAARLFDEM--- 202
+L++ Y+ DARKVFD D + MI + R G E+ A +F +M
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFR 448
Query: 203 ---PE--------RNSATW-------------------------NAMIDGYAKSGNIECA 226
P R SA+ +A+ID Y+ ++ +
Sbjct: 449 LIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDS 508
Query: 227 EILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
++F+ M KD++ W ++ Y + + + LF E+ PDE +++A +L
Sbjct: 509 RLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNL 568
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMI 346
++ LG+E H L+ G + YI ++L+DMYAKCGS + + F +++ CWNS+I
Sbjct: 569 ASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVI 628
Query: 347 DGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCI 406
A HG K+AL+M +M +GI PN +TFV VL+AC+HAG VE+G +F M+ + I
Sbjct: 629 SSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGI 687
Query: 407 SPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQ 466
P EHY CMV LL + G + A E+I M +P + +W +LLSGC N+E+A A +
Sbjct: 688 EPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAE 747
Query: 467 NLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLF 526
++ +P +SG +++L N+YA W E K+R MK GV K PG SW+ IN+++H+F
Sbjct: 748 MAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKE-PGRSWIGINKEVHIF 806
Query: 527 AASDNYH 533
+ D H
Sbjct: 807 LSKDKSH 813
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 221/469 (47%), Gaps = 56/469 (11%)
Query: 34 VYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHR 90
V+ +I D++L N I + + A F M N + ++ ++ C H
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 91 SHQALACYVKMLRNGV-VPTSYSFSSLVKACTLLMDSAAGK----TVHGHVWKRGFDAHV 145
++L +++ R P Y SS ++AC+ L G+ + + K GFD V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL--DGRGRWMVFQLQSFLVKSGFDRDV 183
Query: 146 FVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER 205
+V T L++FY G AR VFD +PE+ WTTMIS V+ G + +LF ++ E
Sbjct: 184 YVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMED 243
Query: 206 N---------------------------------------SATWNAMIDGYAKSGNIECA 226
N ++ N +ID Y K G + A
Sbjct: 244 NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAA 303
Query: 227 EILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
LFN MP K++ISWTTL++ Y +N + + LF M GL PD A ++++++CA L
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMI 346
ALG G +VH Y + G D Y+ +SLIDMYAKC + + VF ++ +N+MI
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMI 423
Query: 347 DG---LATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFV-SMIE 402
+G L T EAL +F +M + IRP+ +TFVS+L A A G S+ + ++
Sbjct: 424 EGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS--ASLTSLGLSKQIHGLMF 481
Query: 403 DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
Y ++ I ++D+ S ++D+ + M + + IW ++ +G
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNSMFAG 529
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 206/438 (47%), Gaps = 48/438 (10%)
Query: 38 MIKTNANQDSF---LMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQA 94
++K+ ++D + L+ F I+ A F + + + + ++ CV RS+ +
Sbjct: 174 LVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVS 233
Query: 95 LACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEF 154
L + +++ + VVP Y S+++ AC++L GK +H H+ + G + + L++
Sbjct: 234 LQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDS 293
Query: 155 YSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE---------- 204
Y G A K+F+ MP ++ +WTT++S + + A LF M +
Sbjct: 294 YVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYAC 353
Query: 205 -----------------------------RNSATWNAMIDGYAKSGNIECAEILFNRMPC 235
+S N++ID YAK + A +F+
Sbjct: 354 SSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAA 413
Query: 236 KDVISWTTLMTCYSR---NKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLG 292
DV+ + ++ YSR + + +F +M R + P + +++ A A L +LGL
Sbjct: 414 ADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLS 473
Query: 293 KEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATH 352
K++H + G LD++ GS+LID+Y+ C + S LVF +++VK+L WNSM G
Sbjct: 474 KQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQ 533
Query: 353 GYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYC-ISPGIE 411
+EAL +F E++ RP+ TF +++TA + V+ G+ +++ +P I
Sbjct: 534 SENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYIT 593
Query: 412 HYGCMVDLLSKGGLIEDA 429
+ ++D+ +K G EDA
Sbjct: 594 N--ALLDMYAKCGSPEDA 609
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 145/296 (48%), Gaps = 42/296 (14%)
Query: 131 TVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISA----- 185
VHG + G + ++ L+ YS G ARKVF++MPER+ +W+TM+SA
Sbjct: 65 VVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHG 124
Query: 186 -------------HVR---------------CGEVDSAAR---------LFDEMPERNSA 208
R C +D R L +R+
Sbjct: 125 IYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVY 184
Query: 209 TWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRG 268
+ID Y K GNI+ A ++F+ +P K ++WTT+++ + R + LF++++
Sbjct: 185 VGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDN 244
Query: 269 LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSL 328
+ PD ++TV+SAC+ L L GK++H +++ G +D + + LID Y KCG + +
Sbjct: 245 VVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAH 304
Query: 329 LVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
+F + KN+ W +++ G + KEA+++F+ M + G++P+ S+LT+C
Sbjct: 305 KLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSC 360
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 135/248 (54%), Gaps = 9/248 (3%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM-VSRGL 269
N +I+ Y+++G + A +F +MP ++++SW+T+++ + + + + + +F E +R
Sbjct: 83 NILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD 142
Query: 270 APDEVAMTTVISACAHLGALG--LGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRS 327
+P+E +++ I AC+ L G + ++ +L+ +GF DVY+G+ LID Y K G+ID +
Sbjct: 143 SPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYA 202
Query: 328 LLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHA 387
LVF L K+ W +MI G G + +L++F ++ + P+G +VL+AC+
Sbjct: 203 RLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSIL 262
Query: 388 GFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFI--W 445
F+E G+ ++ Y + ++D K G + A ++ GM PN I W
Sbjct: 263 PFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGM---PNKNIISW 318
Query: 446 GALLSGCK 453
LLSG K
Sbjct: 319 TTLLSGYK 326
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 11/164 (6%)
Query: 295 VHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGY 354
VH ++V G LD Y+ + LI++Y++ G + + VF K+ +NL W++M+ HG
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 355 AKEALKMFSEMER-KGIRPNGVTFVSVLTACTHAGFVEEGRSRF-VSMIEDYCISPGIE- 411
+E+L +F E R + PN S + AC+ +GR R+ V ++ + + G +
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGL----DGRGRWMVFQLQSFLVKSGFDR 181
Query: 412 --HYGC-MVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGC 452
+ G ++D K G I+ A + + E ++ W ++SGC
Sbjct: 182 DVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMISGC 224
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 168/547 (30%), Positives = 276/547 (50%), Gaps = 47/547 (8%)
Query: 38 MIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQA 94
+IK ++ F+ N + A C + A F M + + + +N ++ + V +A
Sbjct: 454 IIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEA 513
Query: 95 LACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEF 154
+ +M G+V +S +KACT + GK VH K G D + ++L++
Sbjct: 514 FDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDM 573
Query: 155 YSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER--------- 205
YS G+ DARKVF +PE + +I+ + + ++ A LF EM R
Sbjct: 574 YSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITF 632
Query: 206 ----------NSATWNAMIDG---------------------YAKSGNIECAEILFNRMP 234
S T G Y S + A LF+ +
Sbjct: 633 ATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELS 692
Query: 235 C-KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK 293
K ++ WT +M+ +S+N + + + + EM G+ PD+ TV+ C+ L +L G+
Sbjct: 693 SPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR 752
Query: 294 EVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATH 352
+H + LD ++LIDMYAKCG + S VF +++ + N+ WNS+I+G A +
Sbjct: 753 AIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKN 812
Query: 353 GYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH 412
GYA++ALK+F M + I P+ +TF+ VLTAC+HAG V +GR F MI Y I ++H
Sbjct: 813 GYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDH 872
Query: 413 YGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILE 472
CMVDLL + G +++A + I +P++ +W +LL C++H + ++ + L+ LE
Sbjct: 873 VACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELE 932
Query: 473 PSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNY 532
P NS Y LL N+YA W++ + +R M+D GV+K PG SW+++ Q+ H+FAA D
Sbjct: 933 PQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKV-PGYSWIDVEQRTHIFAAGDKS 991
Query: 533 HTSYGHV 539
H+ G +
Sbjct: 992 HSEIGKI 998
Score = 179 bits (455), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 216/462 (46%), Gaps = 46/462 (9%)
Query: 34 VYANMIKTNANQDSFLMNQFIA---ACTTINLATHAFSHMDNPNALVYNALLRTCVHCHR 90
V+A IK + ++ + ++ C + A F ++ N + +NA++R H
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 91 SHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTT 150
SH+ + ++ M +G ++F+SL+ C D G H + K+ ++FV
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 151 LVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVR----------------CGEVDS 194
LV+ Y+ G DAR++F+ M +RD W T+I ++V+ CG V
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Query: 195 AARLFDEMP-----------------------ERNSATWNAMIDGYAKSGNIECAEILFN 231
A L + +R+ T +++ID Y+K G I+ A +F+
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
+P V+S L+ YS+N + V LF EM++RG+ P E+ T++ AC +L L
Sbjct: 589 SLPEWSVVSMNALIAGYSQNN-LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTL 647
Query: 292 GKEVHHYLMVNGFGLD-VYIGSSLIDMYAKCGSIDRSLLVFYKLQV-KNLFCWNSMIDGL 349
G + H + GF + Y+G SL+ MY + + +F +L K++ W M+ G
Sbjct: 648 GTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGH 707
Query: 350 ATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPG 409
+ +G+ +EALK + EM G+ P+ TFV+VL C+ + EGR+ S+I
Sbjct: 708 SQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA-IHSLIFHLAHDLD 766
Query: 410 IEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
++D+ +K G ++ + ++ M N W +L++G
Sbjct: 767 ELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 219/451 (48%), Gaps = 11/451 (2%)
Query: 6 HCKIHTLKDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFI---AACTTINL 62
CK+ + K+ D++ + + ++V++ + + + L N + A C ++
Sbjct: 55 QCKLFKSR-KVFDEMPQRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSY 113
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F ++ + +N++L + + L +V + N + P ++FS ++ C
Sbjct: 114 AEKQFDFLEK-DVTAWNSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCAR 172
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
+ G+ +H + K G + + + LV+ Y+ DAR+VF+ + + + WT +
Sbjct: 173 ETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCL 232
Query: 183 ISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKDV 238
S +V+ G + A +F+ M + + + +I+ Y + G ++ A +LF M DV
Sbjct: 233 FSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDV 292
Query: 239 ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHY 298
++W +++ + + + F M + + +V+SA + L LG VH
Sbjct: 293 VAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAE 352
Query: 299 LMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEA 358
+ G ++Y+GSSL+ MY+KC ++ + VF L+ KN WN+MI G A +G + +
Sbjct: 353 AIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKV 412
Query: 359 LKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVD 418
+++F +M+ G + TF S+L+ C + +E G S+F S+I ++ + +VD
Sbjct: 413 MELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSIIIKKKLAKNLFVGNALVD 471
Query: 419 LLSKGGLIEDALEMIRGMTFEPNSFIWGALL 449
+ +K G +EDA ++ M + ++ W ++
Sbjct: 472 MYAKCGALEDARQIFERMC-DRDNVTWNTII 501
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 125/515 (24%), Positives = 222/515 (43%), Gaps = 82/515 (15%)
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALAC--YVKMLRNGVVPTSYSFSSLVKACTLLM 124
F M +P+ + +N ++ H R + +A + M ++ V T + S++ A ++
Sbjct: 284 FGEMSSPDVVAWNVMISG--HGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 125 DSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMIS 184
+ G VH K G ++++V ++LV YS A KVF+ + E++ W MI
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 185 AHVRCGEVDSAARLFDEMPE---------------------------------------R 205
+ GE LF +M +
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAK 461
Query: 206 NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
N NA++D YAK G +E A +F RM +D ++W T++ Y +++ + LF M
Sbjct: 462 NLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMN 521
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
G+ D + + + AC H+ L GK+VH + G D++ GSSLIDMY+KCG I
Sbjct: 522 LCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIK 581
Query: 326 RSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC- 384
+ VF L ++ N++I G + + +EA+ +F EM +G+ P+ +TF +++ AC
Sbjct: 582 DARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACH 640
Query: 385 ---------------THAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLL--------- 420
T GF EG +S++ Y S G+ + L
Sbjct: 641 KPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700
Query: 421 -------SKGGLIEDALEMIRGMTFE---PNSFIWGALLSGCKLHRNLEIANVAVQNLM- 469
S+ G E+AL+ + M + P+ + +L C + +L A+ +L+
Sbjct: 701 TGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGR-AIHSLIF 759
Query: 470 -ILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMK 503
+ + + L++MYA+ K S++ M+
Sbjct: 760 HLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMR 794
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 285 bits (730), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 161/562 (28%), Positives = 268/562 (47%), Gaps = 41/562 (7%)
Query: 41 TNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVK 100
+N + L+N + A C I A F + N +++N +L + + +
Sbjct: 422 SNNKIEGALLNLY-AKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQ 480
Query: 101 MLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGL 160
M +VP Y++ S++K C L D G+ +H + K F + +V + L++ Y+ LG
Sbjct: 481 MQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGK 540
Query: 161 AGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSAT----------- 209
A + +D +WTTMI+ + + D A F +M +R +
Sbjct: 541 LDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSA 600
Query: 210 ----------------------------WNAMIDGYAKSGNIECAEILFNRMPCKDVISW 241
NA++ Y++ G IE + + F + D I+W
Sbjct: 601 CAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAW 660
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
L++ + ++ + + +F M G+ + + + A + + GK+VH +
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 302 NGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKM 361
G+ + + ++LI MYAKCGSI + F ++ KN WN++I+ + HG+ EAL
Sbjct: 721 TGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDS 780
Query: 362 FSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLS 421
F +M +RPN VT V VL+AC+H G V++G + F SM +Y +SP EHY C+VD+L+
Sbjct: 781 FDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLT 840
Query: 422 KGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSL 481
+ GL+ A E I+ M +P++ +W LLS C +H+N+EI A +L+ LEP +S Y L
Sbjct: 841 RAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVL 900
Query: 482 LVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNX 541
L N+YA +W R MK+ GV+K PG SW+E+ IH F D H ++
Sbjct: 901 LSNLYAVSKKWDARDLTRQKMKEKGVKKE-PGQSWIEVKNSIHSFYVGDQNHPLADEIHE 959
Query: 542 XXXXXXXXXXXAGYVPELGSIL 563
GYV + S+L
Sbjct: 960 YFQDLTKRASEIGYVQDCFSLL 981
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 189/411 (45%), Gaps = 47/411 (11%)
Query: 93 QALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLV 152
+A+ + M G++PT Y+FSS++ AC + G+ +HG V K GF + +V LV
Sbjct: 271 EAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALV 330
Query: 153 EFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------PERN 206
Y LG A +F M +RDA + T+I+ +CG + A LF M P+ N
Sbjct: 331 SLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Query: 207 S-----------------------------ATWN----AMIDGYAKSGNIECAEILFNRM 233
+ A+ N A+++ YAK +IE A F
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK 293
++V+ W ++ Y + +F +M + P++ +++ C LG L LG+
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 294 EVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHG 353
++H ++ F L+ Y+ S LIDMYAK G +D + + + K++ W +MI G +
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 354 YAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCI---SPGI 410
+ +AL F +M +GIR + V + ++AC ++EG+ + C+ S +
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ----QIHAQACVSGFSSDL 626
Query: 411 EHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIA 461
+V L S+ G IE++ + T ++ W AL+SG + N E A
Sbjct: 627 PFQNALVTLYSRCGKIEESY-LAFEQTEAGDNIAWNALVSGFQQSGNNEEA 676
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 216/480 (45%), Gaps = 81/480 (16%)
Query: 105 GVVPTSYSFSSLVKACTLLMDSA-AGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGD 163
G+ P + L++ C S G+ +H + K G D++ + L +FY G
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 164 ARKVFDEMPERDAFAWTTMI---SAHVRCGEVDSA-ARLFDEMPERNSATW--------- 210
A KVFDEMPER F W MI ++ GEV R+ E N T+
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 211 ---------------------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTT 243
N +ID Y+++G ++ A +F+ + KD SW
Sbjct: 199 GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 244 LMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNG 303
+++ S+N+ + + LF +M G+ P A ++V+SAC + +L +G+++H ++ G
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 304 FGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFS 363
F D Y+ ++L+ +Y G++ + +F + ++ +N++I+GL+ GY ++A+++F
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 364 EMERKGIRPNGVTFVSVLTACTHAGFVEEGRSR--------FVS--MIE----------- 402
M G+ P+ T S++ AC+ G + G+ F S IE
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA 438
Query: 403 ------DYCISPGIEHYGCMVDLLSKGGLIED---ALEMIRGMTFE---PNSFIWGALLS 450
DY + +E+ +L GL++D + + R M E PN + + ++L
Sbjct: 439 DIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILK 498
Query: 451 GCKLHRNLEIANVAVQNLMILEPSNSGYY-SLLVNMYAEVNR----WKEVSKIRIAMKDL 505
C +LE+ ++ + Y S+L++MYA++ + W + IR A KD+
Sbjct: 499 TCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDIL--IRFAGKDV 556
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/434 (23%), Positives = 190/434 (43%), Gaps = 52/434 (11%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKAC-- 120
A F M +N +++ + + +V+M+ V P +FS +++AC
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRG 198
Query: 121 -TLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAW 179
++ D + +H + +G V L++ YS G AR+VFD + +D +W
Sbjct: 199 GSVAFDVV--EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSW 256
Query: 180 TTMISAHVRCGEVDSAARLFDE------MP------------------------------ 203
MIS + A RLF + MP
Sbjct: 257 VAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 204 ---ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTL 260
++ NA++ Y GN+ AE +F+ M +D +++ TL+ S+ + L
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 261 FHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAK 320
F M GL PD + +++ AC+ G L G+++H Y GF + I +L+++YAK
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAK 436
Query: 321 CGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSV 380
C I+ +L F + +V+N+ WN M+ + + ++F +M+ + I PN T+ S+
Sbjct: 437 CADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSI 496
Query: 381 LTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGC--MVDLLSKGGLIEDALEMIRGMTF 438
L C G +E G +I+ + + Y C ++D+ +K G ++ A +++ + F
Sbjct: 497 LKTCIRLGDLELGEQIHSQIIK---TNFQLNAYVCSVLIDMYAKLGKLDTAWDIL--IRF 551
Query: 439 EPNSFI-WGALLSG 451
+ W +++G
Sbjct: 552 AGKDVVSWTTMIAG 565
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 285 bits (729), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 166/552 (30%), Positives = 277/552 (50%), Gaps = 39/552 (7%)
Query: 49 LMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVP 108
L+N ++ C + A F + + + +N+++ +AL + M N V
Sbjct: 235 LINLYLK-CGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRL 293
Query: 109 TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF 168
+ SF+S++K C L + + +H V K GF ++T L+ YS DA ++F
Sbjct: 294 SESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLF 353
Query: 169 DEMP-ERDAFAWTTMISAHVRCGEVDSAARLFDEMP------------------------ 203
E+ + +WT MIS ++ + A LF EM
Sbjct: 354 KEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS 413
Query: 204 -----------ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
ER+S A++D Y K G +E A +F+ + KD+++W+ ++ Y++
Sbjct: 414 EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTG 473
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA-LGLGKEVHHYLMVNGFGLDVYIG 311
+ +F E+ G+ P+E +++++ CA A +G GK+ H + + + + +
Sbjct: 474 ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVS 533
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
S+L+ MYAK G+I+ + VF + + K+L WNSMI G A HG A +AL +F EM+++ ++
Sbjct: 534 SALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVK 593
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALE 431
+GVTF+ V ACTHAG VEEG F M+ D I+P EH CMVDL S+ G +E A++
Sbjct: 594 MDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMK 653
Query: 432 MIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNR 491
+I M S IW +L+ C++H+ E+ +A + ++ ++P +S Y LL NMYAE
Sbjct: 654 VIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGD 713
Query: 492 WKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXX 551
W+E +K+R M + V+K PG SW+E+ K + F A D H +
Sbjct: 714 WQERAKVRKLMNERNVKKE-PGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 772
Query: 552 XAGYVPELGSIL 563
GY P+ +L
Sbjct: 773 DLGYEPDTSYVL 784
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 193/409 (47%), Gaps = 60/409 (14%)
Query: 90 RSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQT 149
R+ +A ++ + R G+ FSS++K L D G+ +H K GF V V T
Sbjct: 73 RTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGT 132
Query: 150 TLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLF----DEMPER 205
+LV+ Y D RKVFDEM ER+ WTT+IS + R D LF +E +
Sbjct: 133 SLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQP 192
Query: 206 NSATW-----------------------------------NAMIDGYAKSGNIECAEILF 230
NS T+ N++I+ Y K GN+ A ILF
Sbjct: 193 NSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILF 252
Query: 231 NRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALG 290
++ K V++W ++++ Y+ N + + +F+ M + E + +VI CA+L L
Sbjct: 253 DKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELR 312
Query: 291 LGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ-VKNLFCWNSMIDGL 349
+++H ++ GF D I ++L+ Y+KC ++ +L +F ++ V N+ W +MI G
Sbjct: 313 FTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGF 372
Query: 350 ATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC-------THAGFVEEGRSRFVSMIE 402
+ +EA+ +FSEM+RKG+RPN T+ +LTA HA V+ R ++
Sbjct: 373 LQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTV-- 430
Query: 403 DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
++D K G +E+A ++ G+ + + W A+L+G
Sbjct: 431 ----------GTALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAG 468
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 184/433 (42%), Gaps = 53/433 (12%)
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDS 126
F M N + + L+ + + L +++M G P S++F++ +
Sbjct: 151 FDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG 210
Query: 127 AAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISA- 185
G VH V K G D + V +L+ Y G AR +FD+ + W +MIS
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 270
Query: 186 -------------------HVRCGEVDSAARL----------FDEMPERNSATWNAMID- 215
+VR E A+ + F E + + + D
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 216 --------GYAKSGNIECAEILFNRMPC-KDVISWTTLMTCYSRNKRFGDVVTLFHEMVS 266
Y+K + A LF + C +V+SWT +++ + +N + V LF EM
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 267 RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDR 326
+G+ P+E + +++A + EVH ++ + +G++L+D Y K G ++
Sbjct: 391 KGVRPNEFTYSVILTALPVISP----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEE 446
Query: 327 SLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
+ VF + K++ W++M+ G A G + A+KMF E+ + GI+PN TF S+L C
Sbjct: 447 AAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA- 505
Query: 387 AGFVEEGRSRFVSMIEDYCISPGIEHYGC----MVDLLSKGGLIEDALEMIRGMTFEPNS 442
A G+ + + I ++ C ++ + +K G IE A E+ + E +
Sbjct: 506 ATNASMGQGK---QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDL 561
Query: 443 FIWGALLSGCKLH 455
W +++SG H
Sbjct: 562 VSWNSMISGYAQH 574
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 153/337 (45%), Gaps = 58/337 (17%)
Query: 163 DARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLF----------------------- 199
+A +FD+ P RD ++ +++ R G A RLF
Sbjct: 45 NAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSA 104
Query: 200 ---DEMPER-------------NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTT 243
DE+ R + + +++D Y K N + +F+ M ++V++WTT
Sbjct: 105 TLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTT 164
Query: 244 LMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNG 303
L++ Y+RN +V+TLF M + G P+ + A G G G +VH ++ NG
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 304 FGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFS 363
+ + +SLI++Y KCG++ ++ ++F K +VK++ WNSMI G A +G EAL MF
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 364 EMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVD----- 418
M +R + +F SV+ C + + RF + +C + YG + D
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKEL-----RFTEQL--HC---SVVKYGFLFDQNIRT 334
Query: 419 ----LLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
SK + DAL + + + N W A++SG
Sbjct: 335 ALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISG 371
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 168/367 (45%), Gaps = 70/367 (19%)
Query: 20 IKRCSK-REKKTLESVYANMIKTNANQDSFLMNQFI--------AACTTINLATHAFSHM 70
IK C+ +E + E ++ +++K FL +Q I + CT + A F +
Sbjct: 302 IKLCANLKELRFTEQLHCSVVKYG-----FLFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 71 D-NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAG 129
N + + A++ + +A+ + +M R GV P +++S ++ A ++ S
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS--- 413
Query: 130 KTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRC 189
VH V K ++ V T L++ Y LG +A KVF + ++D AW+ M++ + +
Sbjct: 414 -EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQT 472
Query: 190 GEVDSAARLFDEMP----ERNSATW----------------------------------- 210
GE ++A ++F E+ + N T+
Sbjct: 473 GETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 211 -NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGL 269
+A++ YAK GNIE AE +F R KD++SW ++++ Y+++ + + +F EM R +
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 270 APDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG------SSLIDMYAKCGS 323
D V V +AC H G + G E + +MV D I S ++D+Y++ G
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEG-EKYFDIMVR----DCKIAPTKEHNSCMVDLYSRAGQ 647
Query: 324 IDRSLLV 330
+++++ V
Sbjct: 648 LEKAMKV 654
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 110/236 (46%), Gaps = 2/236 (0%)
Query: 216 GYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVA 275
G S + A LF++ P +D S+ +L+ +SR+ R + LF + G+ D
Sbjct: 36 GTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSI 95
Query: 276 MTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ 335
++V+ A L G+++H + GF DV +G+SL+D Y K + VF +++
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 336 VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS 395
+N+ W ++I G A + E L +F M+ +G +PN TF + L G G
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 396 RFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
++++ + I +++L K G + A ++ T + W +++SG
Sbjct: 216 VHTVVVKN-GLDKTIPVSNSLINLYLKCGNVRKA-RILFDKTEVKSVVTWNSMISG 269
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/486 (30%), Positives = 252/486 (51%), Gaps = 28/486 (5%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
N + +N +L +A+ + K+ G P + SS++ + G+ +H
Sbjct: 216 NIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIH 275
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVD 193
G+V K+G V + +++ Y G +F++ +A I+ R G VD
Sbjct: 276 GYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVD 335
Query: 194 SAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKR 253
A +F+ E+ +V+SWT+++ ++N +
Sbjct: 336 KALEMFELFKEQTMEL---------------------------NVVSWTSIIAGCAQNGK 368
Query: 254 FGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSS 313
+ + LF EM G+ P+ V + +++ AC ++ ALG G+ H + + +V++GS+
Sbjct: 369 DIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSA 428
Query: 314 LIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
LIDMYAKCG I+ S +VF + KNL CWNS+++G + HG AKE + +F + R ++P+
Sbjct: 429 LIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPD 488
Query: 374 GVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMI 433
++F S+L+AC G +EG F M E+Y I P +EHY CMV+LL + G +++A ++I
Sbjct: 489 FISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLI 548
Query: 434 RGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWK 493
+ M FEP+S +WGALL+ C+L N+++A +A + L LEP N G Y LL N+YA W
Sbjct: 549 KEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWT 608
Query: 494 EVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXA 553
EV IR M+ LG++K PG SW+++ +++ A D H + +
Sbjct: 609 EVDSIRNKMESLGLKKN-PGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKS 667
Query: 554 GYVPEL 559
G+ P L
Sbjct: 668 GHRPNL 673
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 120/492 (24%), Positives = 217/492 (44%), Gaps = 77/492 (15%)
Query: 35 YANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDNPNALVYNALLRTCVHCHRS 91
+A ++K+ A D ++ + IA+ + N A + +P +++L+
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 92 HQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTL 151
Q++ + +M +G++P S+ +L K C L GK +H G D FVQ ++
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 152 VEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNS 207
Y G GDARKVFD M ++D + ++ A+ R G ++ R+ EM E N
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 208 ATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSR 267
+WN ++ G+ +SG Y + + V +F ++
Sbjct: 218 VSWNGILSGFNRSG--------------------------YHK-----EAVVMFQKIHHL 246
Query: 268 GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGS---- 323
G PD+V +++V+ + L +G+ +H Y++ G D + S++IDMY K G
Sbjct: 247 GFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGI 306
Query: 324 ---------------------------IDRSLLVF--YKLQVK--NLFCWNSMIDGLATH 352
+D++L +F +K Q N+ W S+I G A +
Sbjct: 307 ISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQN 366
Query: 353 GYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH 412
G EAL++F EM+ G++PN VT S+L AC + + GRS + + + +
Sbjct: 367 GKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLD-NVHV 425
Query: 413 YGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLM--I 470
++D+ +K G I + +++ M N W +L++G +H + ++LM
Sbjct: 426 GSALIDMYAKCGRI-NLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTR 484
Query: 471 LEPSNSGYYSLL 482
L+P + SLL
Sbjct: 485 LKPDFISFTSLL 496
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 100/233 (42%), Gaps = 37/233 (15%)
Query: 42 NANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKM 101
N + S L++ + A C INL+ F+ M N + +N+L+ ++ + ++ + +
Sbjct: 422 NVHVGSALIDMY-AKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESL 480
Query: 102 LRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLA 161
+R + P SF+SL+ AC G T G + + ++ L + M+ L
Sbjct: 481 MRTRLKPDFISFTSLLSAC-----GQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 162 GDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP-ERNSATWNAMIDGYAKS 220
G R G++ A L EMP E +S W A+++
Sbjct: 536 G-------------------------RAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQ 570
Query: 221 GNIECAEI----LFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGL 269
N++ AEI LF+ P ++ ++ L Y+ + +V ++ ++M S GL
Sbjct: 571 NNVDLAEIAAEKLFHLEP-ENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGL 622
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 281 bits (720), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 179/648 (27%), Positives = 300/648 (46%), Gaps = 109/648 (16%)
Query: 19 QIKRC----SKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMD 71
QIK+C ++ + + ++ ++ N+I+ ++FL N + A + +T+A F +
Sbjct: 9 QIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIP 68
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKML-RNGV----VPTSYSFSSLVKAC-----T 121
PN +N LL + + + K+ R+GV + YS S LV A T
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 122 LLMDSAA----------------------GKTVHGHVWKRGFDAHVFVQTTLVEFYSMLG 159
++ D +A GK +HG V K GF++++ V + L+ Y+ +G
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 160 LAGDARKVFDEMPER------------------------------DAFAWTTMISAHVRC 189
DA+KVF + +R D+ +W MI +
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN 248
Query: 190 GEVDSAARLFDEMP---------------------------------------ERNSATW 210
G A F EM + +
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
+A+ID Y K + A+ +F+RM K+V+SWT ++ Y + R + V +F +M G+
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID 368
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
PD + ISACA++ +L G + H + +G V + +SL+ +Y KCG ID S +
Sbjct: 369 PDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRL 428
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
F ++ V++ W +M+ A G A E +++F +M + G++P+GVT V++AC+ AG V
Sbjct: 429 FNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLV 488
Query: 391 EEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLS 450
E+G+ F M +Y I P I HY CM+DL S+ G +E+A+ I GM F P++ W LLS
Sbjct: 489 EKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLS 548
Query: 451 GCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKT 510
C+ NLEI A ++L+ L+P + Y+LL ++YA +W V+++R M++ V+K
Sbjct: 549 ACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKE 608
Query: 511 CPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPE 558
PG SW++ K+H F+A D + GY P+
Sbjct: 609 -PGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPD 655
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 281 bits (720), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 160/519 (30%), Positives = 273/519 (52%), Gaps = 43/519 (8%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKM-LRNGVVPTSYSFSS 115
C + A F ++ P+ + +++++ +QA+ + +M + + V P + +
Sbjct: 109 CGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLIT 168
Query: 116 LVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD 175
LV ACT L +S G+ VHG V +RGF + + +L+ Y+ +A +F + E+D
Sbjct: 169 LVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKD 228
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEM----PERNSATW--------------------- 210
+W+T+I+ +V+ G A +F++M E N AT
Sbjct: 229 VISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE 288
Query: 211 --------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGD 256
A++D Y K + E A +F+R+P KDV+SW L++ ++ N
Sbjct: 289 LAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHR 348
Query: 257 VVTLFHEMV-SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLI 315
+ F M+ PD + M V+ +C+ LG L K H Y++ GF + +IG+SL+
Sbjct: 349 SIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLV 408
Query: 316 DMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG-IRPNG 374
++Y++CGS+ + VF + +K+ W S+I G HG +AL+ F+ M + ++PN
Sbjct: 409 ELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNE 468
Query: 375 VTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIR 434
VTF+S+L+AC+HAG + EG F M+ DY ++P +EHY +VDLL + G ++ A+E+ +
Sbjct: 469 VTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITK 528
Query: 435 GMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKE 494
M F P I G LL C++H+N E+A + L LE +++GYY L+ N+Y W+
Sbjct: 529 RMPFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWEN 588
Query: 495 VSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYH 533
V K+R ++K G++K S +EI +K+H F A D H
Sbjct: 589 VEKLRNSVKQRGIKKGL-AESLIEIRRKVHRFVADDELH 626
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 219/466 (46%), Gaps = 49/466 (10%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F M + +N LL++ + + L + M R+ P +++ +KAC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGE 72
Query: 123 LMDSAAGKTVHGHVWKR-GFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTT 181
L + G+ +HG V K + ++V ++L+ Y G +A ++FDE+ + D W++
Sbjct: 73 LREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSS 132
Query: 182 MISAHVRCGEVDSAARLFDEM-------PER----------------------------- 205
M+S + G A F M P+R
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 206 ----NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLF 261
+ + N++++ YAKS + A LF + KDVISW+T++ CY +N + + +F
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 262 HEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKC 321
++M+ G P+ + V+ ACA L G++ H + G +V + ++L+DMY KC
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKC 312
Query: 322 GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM-ERKGIRPNGVTFVSV 380
S + + VF ++ K++ W ++I G +G A +++ FS M RP+ + V V
Sbjct: 313 FSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKV 372
Query: 381 LTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEP 440
L +C+ GF+E+ + F S + Y +V+L S+ G + +A ++ G+ +
Sbjct: 373 LGSCSELGFLEQAKC-FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALK- 430
Query: 441 NSFIWGALLSGCKLH----RNLEIANVAVQNLMILEPSNSGYYSLL 482
++ +W +L++G +H + LE N V++ + +P+ + S+L
Sbjct: 431 DTVVWTSLITGYGIHGKGTKALETFNHMVKSSEV-KPNEVTFLSIL 475
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 157/346 (45%), Gaps = 55/346 (15%)
Query: 163 DARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLF------DEMP------------- 203
DAR++F EM +R + W T++ + R + + F +E P
Sbjct: 12 DARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG 71
Query: 204 ERNSATWNAMIDGYAKSG----------------NIECAEI-----LFNRMPCKDVISWT 242
E + MI G+ K I+C + +F+ + D+++W+
Sbjct: 72 ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWS 131
Query: 243 TLMTCYSRNKRFGDVVTLFHEMV-SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
++++ + +N V F MV + + PD V + T++SAC L LG+ VH +++
Sbjct: 132 SMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR 191
Query: 302 NGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKM 361
GF D+ + +SL++ YAK + ++ +F + K++ W+++I +G A EAL +
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLV 251
Query: 362 FSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH----YGCMV 417
F++M G PN T + VL AC A +E+GR + I G+E +V
Sbjct: 252 FNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRK-----THELAIRKGLETEVKVSTALV 306
Query: 418 DLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKL----HRNLE 459
D+ K E+A + + + W AL+SG L HR++E
Sbjct: 307 DMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIE 351
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 117/267 (43%), Gaps = 15/267 (5%)
Query: 28 KKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVH 87
+KT E ++T + L++ ++ C + A FS + + + + AL+
Sbjct: 284 RKTHELAIRKGLETEVKVSTALVDMYMK-CFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342
Query: 88 CHRSHQALACY-VKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVF 146
+H+++ + + +L N P + ++ +C+ L K H +V K GFD++ F
Sbjct: 343 NGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPF 402
Query: 147 VQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER- 205
+ +LVE YS G G+A KVF+ + +D WT++I+ + G+ A F+ M +
Sbjct: 403 IGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSS 462
Query: 206 ----NSATWNAMIDGYAKSGNIECAEILFNRMP-----CKDVISWTTLMTCYSRNKRFGD 256
N T+ +++ + +G I +F M ++ + L+ R GD
Sbjct: 463 EVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLG---RVGD 519
Query: 257 VVTLFHEMVSRGLAPDEVAMTTVISAC 283
+ T +P + T++ AC
Sbjct: 520 LDTAIEITKRMPFSPTPQILGTLLGAC 546
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 173/548 (31%), Positives = 278/548 (50%), Gaps = 48/548 (8%)
Query: 32 ESVYANMIKTNANQDSFL----MNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVH 87
E V+A++IK+ D F+ ++ F+ C +++ A F M +A +NA+L
Sbjct: 72 EMVHAHLIKSPFWSDVFVGTATVDMFVK-CNSVDYAAKVFERMPERDATTWNAMLSGFCQ 130
Query: 88 CHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
+ +A + + +M N + P S + +L+++ + + +H + G D V V
Sbjct: 131 SGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTV 190
Query: 148 QTTLVEFYSMLGLAGDARKVFDEMP--ERDAFAWTTMISAHVRCGEVDSAARLFDEM--- 202
T + Y G A+ VF+ + +R +W +M A+ GE A L+ M
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 250
Query: 203 ------------------PE------------------RNSATWNAMIDGYAKSGNIECA 226
PE ++ N I Y+KS + A
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA 310
Query: 227 EILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
+LF+ M + +SWT +++ Y+ + + LFH M+ G PD V + ++IS C
Sbjct: 311 RLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKF 370
Query: 287 GALGLGKEVHHYLMVNGFGLD-VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSM 345
G+L GK + + G D V I ++LIDMY+KCGSI + +F K + W +M
Sbjct: 371 GSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTM 430
Query: 346 IDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYC 405
I G A +G EALK+FS+M +PN +TF++VL AC H+G +E+G F M + Y
Sbjct: 431 IAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYN 490
Query: 406 ISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAV 465
ISPG++HY CMVDLL + G +E+ALE+IR M+ +P++ IWGALL+ CK+HRN++IA A
Sbjct: 491 ISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQAA 550
Query: 466 QNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHL 525
++L LEP + Y + N+YA W ++IR MK ++K PG S +++N K H
Sbjct: 551 ESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKY-PGESVIQVNGKNHS 609
Query: 526 FAASDNYH 533
F ++ H
Sbjct: 610 FTVGEHGH 617
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 184/429 (42%), Gaps = 62/429 (14%)
Query: 78 YNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVW 137
+N +R V+ + ++L + +M R G P +++F + KAC L D + VH H+
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 138 KRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAAR 197
K F + VFV T V+ + A KVF+ MPERDA W M+S + G D A
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 198 LFDEM------PER-------NSATW--------------------------NAMIDGYA 218
LF EM P+ SA++ N I Y
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYG 199
Query: 219 KSGNIECAEILFNRMPCKD--VISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAM 276
K G+++ A+++F + D V+SW ++ YS D L+ M+ PD
Sbjct: 200 KCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTF 259
Query: 277 TTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV 336
+ ++C + L G+ +H + + G D+ ++ I MY+K + L+F +
Sbjct: 260 INLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTS 319
Query: 337 KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSR 396
+ W MI G A G EAL +F M + G +P+ VT +S+++ C G +E G+
Sbjct: 320 RTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK-- 377
Query: 397 FVSMIEDYCISPGIEHYGC----------MVDLLSKGGLIEDALEMIRGMTFEPNSFIWG 446
I + YGC ++D+ SK G I +A ++ T E W
Sbjct: 378 --------WIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDN-TPEKTVVTWT 428
Query: 447 ALLSGCKLH 455
+++G L+
Sbjct: 429 TMIAGYALN 437
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 162/384 (42%), Gaps = 53/384 (13%)
Query: 25 KREKKTLESVYANMIKTNANQDSFLMNQFIAA---CTTINLATHAFSHMDNPNALV--YN 79
++ K LE+++A I+ + + N +I+ C ++ A F +D + V +N
Sbjct: 166 EKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWN 225
Query: 80 ALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKR 139
++ + + A Y MLR P +F +L +C G+ +H H
Sbjct: 226 SMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHL 285
Query: 140 GFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLF 199
G D + T + YS AR +FD M R +WT MIS + G++D A LF
Sbjct: 286 GTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALF 345
Query: 200 DEMPER----------------------NSATW------------------NAMIDGYAK 219
M + + W NA+ID Y+K
Sbjct: 346 HAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSK 405
Query: 220 SGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTV 279
G+I A +F+ P K V++WTT++ Y+ N F + + LF +M+ P+ + V
Sbjct: 406 CGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAV 465
Query: 280 ISACAHLGALGLGKEVHHYLMVNGF----GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ 335
+ ACAH G+L G E H +M + GLD Y S ++D+ + G ++ +L + +
Sbjct: 466 LQACAHSGSLEKGWEYFH-IMKQVYNISPGLDHY--SCMVDLLGRKGKLEEALELIRNMS 522
Query: 336 VK-NLFCWNSMIDGLATHGYAKEA 358
K + W ++++ H K A
Sbjct: 523 AKPDAGIWGALLNACKIHRNVKIA 546
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 152/433 (35%), Positives = 245/433 (56%), Gaps = 19/433 (4%)
Query: 144 HVFVQTTLVEFYSMLGLAGDARKVFDEMP-----ERDAFAWTTMISA-----HVRCGEVD 193
+VF+ TL+ Y+ +G + A ++ EM E D + +I A VR GE
Sbjct: 84 NVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETI 143
Query: 194 SAARL---FDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSR 250
+ + F + N+++ YA G++ A +F++MP KD+++W +++ ++
Sbjct: 144 HSVVIRSGFGSL----IYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 199
Query: 251 NKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI 310
N + + + L+ EM S+G+ PD + +++SACA +GAL LGK VH Y++ G +++
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259
Query: 311 GSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMER-KG 369
+ L+D+YA+CG ++ + +F ++ KN W S+I GLA +G+ KEA+++F ME +G
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 319
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDA 429
+ P +TFV +L AC+H G V+EG F M E+Y I P IEH+GCMVDLL++ G ++ A
Sbjct: 320 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 379
Query: 430 LEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEV 489
E I+ M +PN IW LL C +H + ++A A ++ LEP++SG Y LL NMYA
Sbjct: 380 YEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASE 439
Query: 490 NRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXX 549
RW +V KIR M GV+K PG S VE+ ++H F D H +
Sbjct: 440 QRWSDVQKIRKQMLRDGVKKV-PGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGR 498
Query: 550 XXXAGYVPELGSI 562
GYVP++ ++
Sbjct: 499 LRSEGYVPQISNV 511
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 172/365 (47%), Gaps = 48/365 (13%)
Query: 54 IAACTTINLATHAFSHMDNP-NALVYNALLRTCVHCHRSHQALACYVKMLRNGVV-PTSY 111
+ + ++ A FS ++ P N ++N L+R S A + Y +M +G+V P ++
Sbjct: 63 LPSPPPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTH 122
Query: 112 SFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEM 171
++ L+KA T + D G+T+H V + GF + ++VQ +L+ Y+ G A KVFD+M
Sbjct: 123 TYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKM 182
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLFDEM------PE--------------------- 204
PE+D AW ++I+ G+ + A L+ EM P+
Sbjct: 183 PEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGK 242
Query: 205 ------------RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
RN + N ++D YA+ G +E A+ LF+ M K+ +SWT+L+ + N
Sbjct: 243 RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302
Query: 253 RFGDVVTLFHEMVS-RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG 311
+ + LF M S GL P E+ ++ AC+H G + G E + M + ++ I
Sbjct: 303 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIE 361
Query: 312 --SSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
++D+ A+ G + ++ + ++ N+ W +++ HG L F+ ++
Sbjct: 362 HFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG--DSDLAEFARIQIL 419
Query: 369 GIRPN 373
+ PN
Sbjct: 420 QLEPN 424
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 45/259 (17%)
Query: 32 ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
E++++ +I++ ++ N + A C + A F M + + +N+++
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
+ +ALA Y +M G+ P ++ SL+ AC + GK VH ++ K G ++
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 260
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMIS------------------------ 184
L++ Y+ G +A+ +FDEM ++++ +WT++I
Sbjct: 261 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 320
Query: 185 ------------AHVRCGEVDSAARLFDEMPERNSAT-----WNAMIDGYAKSGNIECAE 227
A CG V F M E + M+D A++G ++ A
Sbjct: 321 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 380
Query: 228 ILFNRMPCK-DVISWTTLM 245
MP + +V+ W TL+
Sbjct: 381 EYIKSMPMQPNVVIWRTLL 399
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 162/544 (29%), Positives = 291/544 (53%), Gaps = 45/544 (8%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTC 85
+ SV+ + + + D L N + + C + + F + NA+ + A++ +
Sbjct: 219 RIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSY 278
Query: 86 VHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDA-H 144
S +AL + +M+++G+ P + S++ +C L+ GK+VHG +R D +
Sbjct: 279 NRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNY 338
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM-- 202
+ LVE Y+ G D V + +R+ AW ++IS + G V A LF +M
Sbjct: 339 ESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVT 398
Query: 203 ----PE--------------------------------RNSATWNAMIDGYAKSGNIECA 226
P+ + N++ID Y+KSG+++ A
Sbjct: 399 QRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSA 458
Query: 227 EILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
+FN++ + V++W +++ +S+N + ++LF M L +EV VI AC+ +
Sbjct: 459 STVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSI 518
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMI 346
G+L GK VHH L+++G D++ ++LIDMYAKCG ++ + VF + +++ W+SMI
Sbjct: 519 GSLEKGKWVHHKLIISGLK-DLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMI 577
Query: 347 DGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCI 406
+ HG A+ F++M G +PN V F++VL+AC H+G VEEG+ F ++++ + +
Sbjct: 578 NAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF-NLMKSFGV 636
Query: 407 SPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQ 466
SP EH+ C +DLLS+ G +++A I+ M F ++ +WG+L++GC++H+ ++I
Sbjct: 637 SPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKN 696
Query: 467 NLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLF 526
+L + ++GYY+LL N+YAE W+E ++R AMK ++K PG S +EI+QK+ F
Sbjct: 697 DLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKV-PGYSAIEIDQKVFRF 755
Query: 527 AASD 530
A +
Sbjct: 756 GAGE 759
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 212/440 (48%), Gaps = 47/440 (10%)
Query: 53 FIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYS 112
F+ + + L AF + P++ +Y L++ V CH A+ Y +++ + +
Sbjct: 46 FMGSPDSSRLVFEAFPY---PDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFV 102
Query: 113 FSSLVKACTLLMDS-AAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEM 171
F S+++AC + + G VHG + K G D ++T+L+ Y G DA KVFD M
Sbjct: 103 FPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGM 162
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLF----DEMPERNSATWNAMIDG----------- 216
P RD AW+T++S+ + GEV A R+F D+ E ++ T ++++G
Sbjct: 163 PVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIAR 222
Query: 217 ------------------------YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
Y+K G++ +E +F ++ K+ +SWT +++ Y+R +
Sbjct: 223 SVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGE 282
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDV-YIG 311
+ F EM+ G+ P+ V + +V+S+C +G + GK VH + + + +
Sbjct: 283 FSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLS 342
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
+L+++YA+CG + V + +N+ WNS+I A G +AL +F +M + I+
Sbjct: 343 LALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIK 402
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALE 431
P+ T S ++AC +AG V G+ +I +++ ++D+ SK G ++ A
Sbjct: 403 PDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDSAST 460
Query: 432 MIRGMTFEPNSFIWGALLSG 451
+ + + W ++L G
Sbjct: 461 VFNQIKHR-SVVTWNSMLCG 479
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 107/451 (23%), Positives = 217/451 (48%), Gaps = 56/451 (12%)
Query: 34 VYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHR 90
V+ +IK + D+ + + ++ A F M + + ++ L+ +C+
Sbjct: 123 VHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGE 182
Query: 91 SHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTT 150
+AL + M+ +GV P + + S+V+ C L ++VHG + ++ FD + +
Sbjct: 183 VVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNS 242
Query: 151 LVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM-------- 202
L+ YS G + ++F+++ +++A +WT MIS++ R + A R F EM
Sbjct: 243 LLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPN 302
Query: 203 ---------------------------------PERNSATWNAMIDGYAKSGNIECAEIL 229
P S + A+++ YA+ G + E +
Sbjct: 303 LVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL-ALVELYAECGKLSDCETV 361
Query: 230 FNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGAL 289
+ +++++W +L++ Y+ + LF +MV++ + PD + + ISAC + G +
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Query: 290 GLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGL 349
LGK++H +++ D ++ +SLIDMY+K GS+D + VF +++ +++ WNSM+ G
Sbjct: 422 PLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGF 480
Query: 350 ATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGR----SRFVSMIEDYC 405
+ +G + EA+ +F M + N VTF++V+ AC+ G +E+G+ +S ++D
Sbjct: 481 SQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLF 540
Query: 406 ISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
++D+ +K G + A + R M
Sbjct: 541 TDTA------LIDMYAKCGDLNAAETVFRAM 565
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 182/382 (47%), Gaps = 48/382 (12%)
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP----- 203
T L+E Y+ +G +R VF+ P D+F + +I +V C +D+A L+ +
Sbjct: 38 TKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQ 97
Query: 204 -----------------------------------ERNSATWNAMIDGYAKSGNIECAEI 228
+ ++ +++ Y ++GN+ AE
Sbjct: 98 ISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEK 157
Query: 229 LFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA 288
+F+ MP +D+++W+TL++ N + +F MV G+ PD V M +V+ CA LG
Sbjct: 158 VFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGC 217
Query: 289 LGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDG 348
L + + VH + F LD + +SL+ MY+KCG + S +F K+ KN W +MI
Sbjct: 218 LRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISS 277
Query: 349 LATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS--RFVSMIEDYCI 406
++++AL+ FSEM + GI PN VT SVL++C G + EG+S F E +
Sbjct: 278 YNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE---L 334
Query: 407 SPGIEHYG-CMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAV 465
P E +V+L ++ G + D ++R ++ + N W +L+S HR + I + +
Sbjct: 335 DPNYESLSLALVELYAECGKLSDCETVLRVVS-DRNIVAWNSLIS-LYAHRGMVIQALGL 392
Query: 466 QNLMILEPSNSGYYSLLVNMYA 487
M+ + ++L ++ A
Sbjct: 393 FRQMVTQRIKPDAFTLASSISA 414
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 140/341 (41%), Gaps = 40/341 (11%)
Query: 205 RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM 264
R+ +I+ YA G+ + + ++F P D + L+ C + L+H +
Sbjct: 32 RDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNVWCHLLDAAIDLYHRL 91
Query: 265 VSRGLAPDEVAMTTVISACA-HLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGS 323
VS + +V+ ACA L +G +VH ++ G D I +SL+ MY + G+
Sbjct: 92 VSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGN 151
Query: 324 IDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTA 383
+ + VF + V++L W++++ +G +AL+MF M G+ P+ VT +SV+
Sbjct: 152 LSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEG 211
Query: 384 CTHAGFVEEGRS-------RFVSMIEDYCISPGIEHYGC--------------------- 415
C G + RS + + E C S + C
Sbjct: 212 CAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSW 271
Query: 416 --MVDLLSKGGLIEDAL----EMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLM 469
M+ ++G E AL EMI+ EPN ++LS C L L +V
Sbjct: 272 TAMISSYNRGEFSEKALRSFSEMIKS-GIEPNLVTLYSVLSSCGL-IGLIREGKSVHGFA 329
Query: 470 ILEPSNSGYYSL---LVNMYAEVNRWKEVSKIRIAMKDLGV 507
+ + Y SL LV +YAE + + + + D +
Sbjct: 330 VRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNI 370
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 163/537 (30%), Positives = 255/537 (47%), Gaps = 46/537 (8%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPT-----SYSFSSLV 117
A F M + +++N T + +R ++ +++ R+ + + + + ++
Sbjct: 173 ARKVFDRMPEKDTILWN----TMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDIL 228
Query: 118 KACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAF 177
A L + G +H K G +H +V T + YS G +F E + D
Sbjct: 229 PAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIV 288
Query: 178 AWTTMISAHVRCGEVDSAARLFDEM----PERNSATW----------------------- 210
A+ MI + GE + + LF E+ S+T
Sbjct: 289 AYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKS 348
Query: 211 ---------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLF 261
A+ Y+K IE A LF+ P K + SW +++ Y++N D ++LF
Sbjct: 349 NFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLF 408
Query: 262 HEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKC 321
EM +P+ V +T ++SACA LGAL LGK VH + F +Y+ ++LI MYAKC
Sbjct: 409 REMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC 468
Query: 322 GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
GSI + +F + KN WN+MI G HG +EAL +F EM GI P VTF+ VL
Sbjct: 469 GSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVL 528
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPN 441
AC+HAG V+EG F SMI Y P ++HY CMVD+L + G ++ AL+ I M+ EP
Sbjct: 529 YACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPG 588
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIA 501
S +W LL C++H++ +A + L L+P N GY+ LL N+++ + + + +R
Sbjct: 589 SSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQT 648
Query: 502 MKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPE 558
K + K PG + +EI + H+F + D H + AGY PE
Sbjct: 649 AKKRKLAK-APGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPE 704
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 208/492 (42%), Gaps = 61/492 (12%)
Query: 13 KDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMN---QFIAACTTINLATHAFSH 69
K+ LD KR + L +A +I D L+ Q ++ I A F
Sbjct: 20 KNTYLDFFKRSTSISH--LAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLS 77
Query: 70 MDNPNALVYNALLRTCVHCHRSHQALACYVKMLRN-GVVPTSYSFSSLVKACTLLMDSAA 128
+ P+ ++N L+R H +L+ + + ++ + P S +++ + A + D A
Sbjct: 78 VQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 129 GKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVR 188
G+ +HG G D+ + + + +V+ Y DARKVFD MPE+D W TMIS + +
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 189 ------------------CGEVDSAARLFDEMPE-----------------------RNS 207
C +D+ L D +P +
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTT-LLDILPAVAELQELRLGMQIHSLATKTGCYSHD 256
Query: 208 ATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSR 267
I Y+K G I+ LF D++++ ++ Y+ N ++LF E++
Sbjct: 257 YVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELM-- 314
Query: 268 GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRS 327
L+ + +T++S G L L +H Y + + F + ++L +Y+K I+ +
Sbjct: 315 -LSGARLRSSTLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESA 373
Query: 328 LLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHA 387
+F + K+L WN+MI G +G ++A+ +F EM++ PN VT +L+AC
Sbjct: 374 RKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQL 433
Query: 388 GFVEEGRSRFVSMIEDYCISPGIEH----YGCMVDLLSKGGLIEDALEMIRGMTFEPNSF 443
G + G+ + D S E ++ + +K G I +A + MT + N
Sbjct: 434 GALSLGK-----WVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMT-KKNEV 487
Query: 444 IWGALLSGCKLH 455
W ++SG LH
Sbjct: 488 TWNTMISGYGLH 499
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 164/486 (33%), Positives = 268/486 (55%), Gaps = 40/486 (8%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
K ++ M + N + ++N + A I A F + + + + ++ C+
Sbjct: 225 KDARKLFDEMPERNLVTWNVMLNGYSKA-GLIEQAEELFDQITEKDIVSWGTMIDGCLRK 283
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
++ +AL Y +MLR G+ P+ L+ A + S+ G +HG + KRGFD + F+Q
Sbjct: 284 NQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQ 343
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSA 208
T++ FY++ ++ A + F+ + + A
Sbjct: 344 ATIIHFYAV-------------------------------SNDIKLALQQFEASVKDHIA 372
Query: 209 TWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRG 268
+ NA+I G+ K+G +E A +F++ KD+ SW +++ Y+++ + LF EM+S
Sbjct: 373 SRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSS 432
Query: 269 -LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRS 327
+ PD + M +V SA + LG+L GK H YL + + + +++IDMYAKCGSI+ +
Sbjct: 433 QVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETA 492
Query: 328 LLVFYKLQVKNLFC-----WNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLT 382
L +F+ Q KN+ WN++I G ATHG+AK AL ++S+++ I+PN +TFV VL+
Sbjct: 493 LNIFH--QTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLS 550
Query: 383 ACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNS 442
AC HAG VE G++ F SM D+ I P I+HYGCMVDLL K G +E+A EMI+ M + +
Sbjct: 551 ACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADV 610
Query: 443 FIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAM 502
IWG LLS + H N+EIA +A L ++PS+ G +L N+YA+ RW++V+ +R M
Sbjct: 611 MIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEM 670
Query: 503 KDLGVE 508
+ VE
Sbjct: 671 RTRDVE 676
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/482 (24%), Positives = 216/482 (44%), Gaps = 69/482 (14%)
Query: 14 DKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNP 73
+ +L+ +C R ESV+ + K ++ + +++ ++ + + A F M
Sbjct: 80 NSVLNMYAKC--RLLADAESVFRDHAKLDSASFNIMVDGYVRSRRLWD-ALKLFDVMPER 136
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
+ + Y L++ ++ +A+ + +M G++ + ++++ AC+ L + +
Sbjct: 137 SCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQ 196
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVD 193
K + VFV T L+ Y + DARK
Sbjct: 197 SLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARK--------------------------- 229
Query: 194 SAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKR 253
LFDEMPERN TWN M++GY+K+G IE AE LF+++ KD++SW T++ R +
Sbjct: 230 ----LFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQ 285
Query: 254 FGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSS 313
+ + + EM+ G+ P EV M ++SA A G ++H ++ GF ++ ++
Sbjct: 286 LDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQAT 345
Query: 314 LIDMYA-------------------------------KCGSIDRSLLVFYKLQVKNLFCW 342
+I YA K G ++++ VF + K++F W
Sbjct: 346 IIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSW 405
Query: 343 NSMIDGLATHGYAKEALKMFSEM-ERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMI 401
N+MI G A + AL +F EM ++P+ +T VSV +A + G +EEG+ R +
Sbjct: 406 NAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGK-RAHDYL 464
Query: 402 EDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFI--WGALLSGCKLHRNLE 459
I P ++D+ +K G IE AL + +S I W A++ G H + +
Sbjct: 465 NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAK 524
Query: 460 IA 461
+A
Sbjct: 525 LA 526
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 172/404 (42%), Gaps = 93/404 (23%)
Query: 109 TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF 168
T + S + +C D G+ +H V K G D++ ++ +++ Y+ L DA VF
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 169 DEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEI 228
+ + D+ ++ M+ +VR + A +LFD MPER+ ++ +I GYA+
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQ--------- 150
Query: 229 LFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA 288
N ++ + + LF EM + G+ +EV + TVISAC+HLG
Sbjct: 151 ----------------------NNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGG 188
Query: 289 LGLGKEVHHYLMVNGFGLDVYIGSSLIDM------------------------------- 317
+ + + + V++ ++L+ M
Sbjct: 189 IWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNG 248
Query: 318 YAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTF 377
Y+K G I+++ +F ++ K++ W +MIDG EAL ++EM R G++P+ V
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 378 VSVLTACT-----------HAGFVEEGRSRF----VSMIEDYCISPGI------------ 410
V +L+A H V+ G + ++I Y +S I
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 411 EHYGCMVDLLS---KGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
+H L++ K G++E A E+ T + + F W A++SG
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVF-DQTHDKDIFSWNAMISG 411
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/543 (29%), Positives = 281/543 (51%), Gaps = 44/543 (8%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F M + + + + A++ + + +A C+ +M++ G P ++ SS++K+C
Sbjct: 64 ARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRN 123
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDAR-KVFDEMPERDAFAWTT 181
+ A G VHG V K G + ++V ++ Y+ + +A +F ++ ++ WTT
Sbjct: 124 MKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTT 183
Query: 182 MISAHVRCGEVDSAARLFDEM--------P------------------------------ 203
+I+ G+ +++ +M P
Sbjct: 184 LITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIKRG 243
Query: 204 -ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFH 262
+ N N+++D Y + G + A+ F+ M KD+I+W TL++ R+ + + +F
Sbjct: 244 FQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISELERSDS-SEALLMFQ 302
Query: 263 EMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG 322
S+G P+ T++++ACA++ AL G+++H + GF +V + ++LIDMYAKCG
Sbjct: 303 RFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCG 362
Query: 323 SIDRSLLVFYKL-QVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
+I S VF ++ +NL W SM+ G +HGY EA+++F +M GIRP+ + F++VL
Sbjct: 363 NIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVL 422
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPN 441
+AC HAG VE+G F M +Y I+P + Y C+VDLL + G I +A E++ M F+P+
Sbjct: 423 SACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPD 482
Query: 442 SFIWGALLSGCKLHR-NLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRI 500
WGA+L CK H+ N I+ +A + +M L+P G Y +L +YA +W + +++R
Sbjct: 483 ESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVRK 542
Query: 501 AMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELG 560
M+ +G +K G SW+ + ++ FA SD + V AGYVPEL
Sbjct: 543 MMRMMGNKKEA-GMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELD 601
Query: 561 SIL 563
S++
Sbjct: 602 SLV 604
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 162/355 (45%), Gaps = 48/355 (13%)
Query: 144 HVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP 203
H + T L+ Y GL +AR +FDEMP+RD AWT MI+ + A F EM
Sbjct: 44 HHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMV 103
Query: 204 ERNSA---------------------------------------TWNAMIDGYAK-SGNI 223
++ ++ NAM++ YA S +
Sbjct: 104 KQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTM 163
Query: 224 ECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVV---TLFHEMVSRGLAPDEVAMTTVI 280
E A ++F + K+ ++WTTL+T ++ GD + ++ +M+ +T +
Sbjct: 164 EAACLIFRDIKVKNDVTWTTLITGFT---HLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220
Query: 281 SACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLF 340
A A + ++ GK++H ++ GF ++ + +S++D+Y +CG + + F++++ K+L
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLI 280
Query: 341 CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSM 400
WN++I L + EAL MF E +G PN TF S++ AC + + G+ +
Sbjct: 281 TWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQ-QLHGR 338
Query: 401 IEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
I + +E ++D+ +K G I D+ + + N W +++ G H
Sbjct: 339 IFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSH 393
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 164/396 (41%), Gaps = 77/396 (19%)
Query: 46 DSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNG 105
D+ +MN + T+ A F + N + + L+ H L Y +ML
Sbjct: 149 DNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLEN 208
Query: 106 VVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDAR 165
T Y + V+A + GK +H V KRGF +++ V ++++ Y G +A+
Sbjct: 209 AEVTPYCITIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAK 268
Query: 166 KVFDEMPERDAFAWTTMIS---------------------------------------AH 186
F EM ++D W T+IS A
Sbjct: 269 HYFHEMEDKDLITWNTLISELERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAA 328
Query: 187 VRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRM-PCKDVISWTTLM 245
+ CG+ R+F +N NA+ID YAK GNI ++ +F + ++++SWT++M
Sbjct: 329 LNCGQ-QLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMM 387
Query: 246 TCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFG 305
Y + + V LF +MVS G+ PD + V+SAC H G + G + + +M + +G
Sbjct: 388 IGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLK-YFNVMESEYG 446
Query: 306 LDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM 365
++ DR + +N ++D L G EA ++ +
Sbjct: 447 INP----------------DRDI-------------YNCVVDLLGRAGKIGEAYEL---V 474
Query: 366 ERKGIRPNGVTFVSVLTAC---THAGFVEEGRSRFV 398
ER +P+ T+ ++L AC H G + +R V
Sbjct: 475 ERMPFKPDESTWGAILGACKAHKHNGLISRLAARKV 510
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 125/251 (49%), Gaps = 7/251 (2%)
Query: 203 PERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFH 262
P+++ +I Y + G +E A LF+ MP +DV++WT ++T Y+ + FH
Sbjct: 41 PKKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFH 100
Query: 263 EMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG 322
EMV +G +P+E +++V+ +C ++ L G VH ++ G +Y+ +++++MYA C
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 323 -SIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM--ERKGIRPNGVTFVS 379
+++ + L+F ++VKN W ++I G G LKM+ +M E + P +T
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAV 220
Query: 380 VLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE 439
+A + V G+ S+I+ + ++DL + G + +A M +
Sbjct: 221 RASASIDS--VTTGKQIHASVIKR-GFQSNLPVMNSILDLYCRCGYLSEAKHYFHEME-D 276
Query: 440 PNSFIWGALLS 450
+ W L+S
Sbjct: 277 KDLITWNTLIS 287
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/495 (31%), Positives = 253/495 (51%), Gaps = 40/495 (8%)
Query: 55 AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFS 114
A C I A F+ + N + + +++ V + L + +M N V+ Y++
Sbjct: 187 AKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYG 246
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
+L+ ACT L GK HG + K G + + T+L++ Y G +AR+VF+E
Sbjct: 247 TLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHV 306
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSAT--------------------- 209
D WT MI + G V+ A LF +M + N T
Sbjct: 307 DLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVH 366
Query: 210 --------W-----NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGD 256
W NA++ YAK A+ +F KD+++W ++++ +S+N +
Sbjct: 367 GLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHE 426
Query: 257 VVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGF--GLDVYIGSSL 314
+ LFH M S + P+ V + ++ SACA LG+L +G +H Y + GF V++G++L
Sbjct: 427 ALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTAL 486
Query: 315 IDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNG 374
+D YAKCG + L+F ++ KN W++MI G G +L++F EM +K +PN
Sbjct: 487 LDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNE 546
Query: 375 VTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIR 434
TF S+L+AC H G V EG+ F SM +DY +P +HY CMVD+L++ G +E AL++I
Sbjct: 547 STFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIE 606
Query: 435 GMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKE 494
M +P+ +GA L GC +H ++ + ++ ++ L P ++ YY L+ N+YA RW +
Sbjct: 607 KMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRWNQ 666
Query: 495 VSKIRIAMKDLGVEK 509
++R MK G+ K
Sbjct: 667 AKEVRNLMKQRGLSK 681
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 190/426 (44%), Gaps = 45/426 (10%)
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDS 126
F + P+ ++ +LR S + + Y ++++G FS +KACT L D
Sbjct: 99 FDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDL 158
Query: 127 AAGKTVHGHVWK-RGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISA 185
GK +H + K FD V T L++ Y+ G A KVF+++ R+ WT+MI+
Sbjct: 159 DNGKKIHCQLVKVPSFDNVVL--TGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAG 216
Query: 186 HVRCGEVDSAARLFDEMPERN----------------------SATW------------- 210
+V+ + LF+ M E N W
Sbjct: 217 YVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 276
Query: 211 ----NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVS 266
+++D Y K G+I A +FN D++ WT ++ Y+ N + ++LF +M
Sbjct: 277 SCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKG 336
Query: 267 RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDR 326
+ P+ V + +V+S C + L LG+ VH + G D + ++L+ MYAKC
Sbjct: 337 VEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI-WDTNVANALVHMYAKCYQNRD 395
Query: 327 SLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
+ VF K++ WNS+I G + +G EAL +F M + + PNGVT S+ +AC
Sbjct: 396 AKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACAS 455
Query: 387 AGFVEEGRSRFVSMIEDYCISPGIEHYG-CMVDLLSKGGLIEDALEMIRGMTFEPNSFIW 445
G + G S ++ ++ H G ++D +K G + A +I E N+ W
Sbjct: 456 LGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA-RLIFDTIEEKNTITW 514
Query: 446 GALLSG 451
A++ G
Sbjct: 515 SAMIGG 520
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 138/304 (45%), Gaps = 38/304 (12%)
Query: 130 KTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRC 189
+ HG + G + + T LV Y G DAR VFD++PE D + W M+ +
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 190 GEVDSAARLFD--------------------------------------EMPERNSATWN 211
E +L+D ++P ++
Sbjct: 121 KESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLT 180
Query: 212 AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAP 271
++D YAK G I+ A +FN + ++V+ WT+++ Y +N + + LF+ M +
Sbjct: 181 GLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLG 240
Query: 272 DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVF 331
+E T+I AC L AL GK H L+ +G L + +SL+DMY KCG I + VF
Sbjct: 241 NEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVF 300
Query: 332 YKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVE 391
+ +L W +MI G +G EAL +F +M+ I+PN VT SVL+ C +E
Sbjct: 301 NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLE 360
Query: 392 EGRS 395
GRS
Sbjct: 361 LGRS 364
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 142/315 (45%), Gaps = 46/315 (14%)
Query: 213 MIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPD 272
++ Y G + A ++F+++P D W ++ CY NK +VV L+ ++ G D
Sbjct: 82 LVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYD 141
Query: 273 EVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFY 332
++ + + AC L L GK++H L V D + + L+DMYAKCG I + VF
Sbjct: 142 DIVFSKALKACTELQDLDNGKKIHCQL-VKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFN 200
Query: 333 KLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEE 392
+ ++N+ CW SMI G + +E L +F+ M + N T+ +++ ACT + +
Sbjct: 201 DITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQ 260
Query: 393 GRSRFVSMIEDYCISPGIEHYGCMV----DLLSKGGLIEDA------------------- 429
G+ + GIE C+V D+ K G I +A
Sbjct: 261 GK-----WFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMI 315
Query: 430 ---------------LEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMI-LEP 473
+ ++G+ +PN ++LSGC L NLE+ +V L I +
Sbjct: 316 VGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGR-SVHGLSIKVGI 374
Query: 474 SNSGYYSLLVNMYAE 488
++ + LV+MYA+
Sbjct: 375 WDTNVANALVHMYAK 389
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 158/349 (45%), Gaps = 49/349 (14%)
Query: 49 LMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVP 108
L++ ++ C I+ A F+ + + +++ A++ H ++AL+ + KM + P
Sbjct: 283 LLDMYVK-CGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKP 341
Query: 109 TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRG-FDAHVFVQTTLVEFYSMLGLAGDARKV 167
+ +S++ C L+ + G++VHG K G +D + V LV Y+ DA+ V
Sbjct: 342 NCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYAKCYQNRDAKYV 399
Query: 168 FDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWN---------------- 211
F+ E+D AW ++IS + G + A LF M S T N
Sbjct: 400 FEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVASLFSACASLGS 458
Query: 212 --------------------------AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLM 245
A++D YAK G+ + A ++F+ + K+ I+W+ ++
Sbjct: 459 LAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMI 518
Query: 246 TCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVN-GF 304
Y + + LF EM+ + P+E T+++SAC H G + GK+ + + F
Sbjct: 519 GGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNF 578
Query: 305 GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATH 352
+ ++DM A+ G ++++L + K+ ++ ++ C+ + + G H
Sbjct: 579 TPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMH 627
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 83/177 (46%), Gaps = 14/177 (7%)
Query: 279 VISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKN 338
++S C ++ +L ++ H L NG D+ I + L+ +Y G + LVF ++ +
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 339 LFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFV 398
+ W M+ + + E +K++ + + G R + + F L ACT ++ G+
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 399 SMIE----DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
+++ D + G ++D+ +K G I+ A ++ +T N W ++++G
Sbjct: 167 QLVKVPSFDNVVLTG------LLDMYAKCGEIKSAHKVFNDITLR-NVVCWTSMIAG 216
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 172/572 (30%), Positives = 281/572 (49%), Gaps = 52/572 (9%)
Query: 13 KDKILDQ------IKRCSKREKKTL-ESVYANMIKTNANQDSFLMNQFIAACTTINL--- 62
+D + DQ IK C+ L + ++A +IK ++ N IA N
Sbjct: 162 EDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSD 221
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVV-PTSYSFSSLVKACT 121
A+ F + + + +++++ +AL+ +ML GV P Y F S +KAC+
Sbjct: 222 ASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACS 281
Query: 122 LLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTT 181
L+ G +HG K + +L + Y+ G AR+VFD++ D +W
Sbjct: 282 SLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNV 341
Query: 182 MISAHVRCGEVDSAARLFDEM------PERNS------------------------ATW- 210
+I+ G D A +F +M P+ S W
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG 401
Query: 211 --------NAMIDGYAKSGNIECAEILFNRMPCK-DVISWTTLMTCYSRNKRFGDVVTLF 261
N+++ Y ++ C LF D +SW T++T ++++ +++ LF
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF 461
Query: 262 HEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKC 321
M+ PD + M ++ C + +L LG +VH Y + G + +I + LIDMYAKC
Sbjct: 462 KLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKC 521
Query: 322 GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
GS+ ++ +F + +++ W+++I G A G+ +EAL +F EM+ GI PN VTFV VL
Sbjct: 522 GSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVL 581
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPN 441
TAC+H G VEEG + +M ++ ISP EH C+VDLL++ G + +A I M EP+
Sbjct: 582 TACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPD 641
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIA 501
+W LLS CK N+ +A A +N++ ++P NS + LL +M+A W+ + +R +
Sbjct: 642 VVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSS 701
Query: 502 MKDLGVEKTCPGSSWVEINQKIHLFAASDNYH 533
MK V+K PG SW+EI KIH+F A D +H
Sbjct: 702 MKKHDVKKI-PGQSWIEIEDKIHIFFAEDIFH 732
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 200/476 (42%), Gaps = 54/476 (11%)
Query: 24 SKREKKTLESVYANMIKTNANQDSFLMNQFIA---ACTTINLATHAFSHMDNPNALVYNA 80
S R ++ +++ +N D+ L N ++ C ++ A F M N + Y +
Sbjct: 79 SSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTS 138
Query: 81 LLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRG 140
++ + +A+ Y+KML+ +VP ++F S++KAC D GK +H V K
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198
Query: 141 FDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFD 200
+H+ Q L+ Y DA +VF +P +D +W+++I+ + G A
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258
Query: 201 EM-------------------------PER---------------NSATWNAMIDGYAKS 220
EM P+ N+ ++ D YA+
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARC 318
Query: 221 GNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVI 280
G + A +F+++ D SW ++ + N + V++F +M S G PD +++ +++
Sbjct: 319 GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLL 378
Query: 281 SACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK-NL 339
A AL G ++H Y++ GF D+ + +SL+ MY C + +F + +
Sbjct: 379 CAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADS 438
Query: 340 FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVS 399
WN+++ H E L++F M P+ +T ++L C VE + S
Sbjct: 439 VSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC-----VEISSLKLGS 493
Query: 400 MIEDYCISPGI--EHY--GCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
+ Y + G+ E + ++D+ +K G + A + M + W L+ G
Sbjct: 494 QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMD-NRDVVSWSTLIVG 548
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 154/322 (47%), Gaps = 40/322 (12%)
Query: 112 SFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEM 171
++ SL+ AC+ A G+ +H H+ + ++ Y G DAR+VFD M
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLF------DEMPERNS------------------ 207
PER+ ++T++I+ + + G+ A RL+ D +P++ +
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 208 ---------------ATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
NA+I Y + + A +F +P KD+ISW++++ +S+
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 253 RFGDVVTLFHEMVSRGL-APDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG 311
+ ++ EM+S G+ P+E + + AC+ L G ++H + + + G
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
SL DMYA+CG ++ + VF +++ + WN +I GLA +GYA EA+ +FS+M G
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 372 PNGVTFVSVLTACTHAGFVEEG 393
P+ ++ S+L A T + +G
Sbjct: 369 PDAISLRSLLCAQTKPMALSQG 390
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 34/209 (16%)
Query: 278 TVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK 337
++I AC+ +L G+++H +++ + D + + ++ MY KCGS+ + VF + +
Sbjct: 72 SLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPER 131
Query: 338 NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRF 397
NL + S+I G + +G EA++++ +M ++ + P+ F S++ AC + V G+
Sbjct: 132 NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLH 191
Query: 398 VSMIEDYCISPGIEH--------------------YGC-MVDLLSKGGLIE--------- 427
+I+ S I YG M DL+S +I
Sbjct: 192 AQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEF 251
Query: 428 DAL----EMIRGMTFEPNSFIWGALLSGC 452
+AL EM+ F PN +I+G+ L C
Sbjct: 252 EALSHLKEMLSFGVFHPNEYIFGSSLKAC 280
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 161/537 (29%), Positives = 267/537 (49%), Gaps = 42/537 (7%)
Query: 62 LATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACT 121
A F +M + + +N+++ +A+ ++++LR G+ P Y+ +S++KA +
Sbjct: 368 FARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAAS 427
Query: 122 LLMDSAA-GKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWT 180
L + + K VH H K + FV T L++ YS +A +F E D AW
Sbjct: 428 SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF-ERHNFDLVAWN 486
Query: 181 TMISAHVRCGEVDSAARLFDEMPERNSAT------------------------------- 209
M++ + + + +LF M ++ +
Sbjct: 487 AMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS 546
Query: 210 ------W--NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLF 261
W + ++D Y K G++ A+ F+ +P D ++WTT+++ N +F
Sbjct: 547 GYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVF 606
Query: 262 HEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKC 321
+M G+ PDE + T+ A + L AL G+++H + D ++G+SL+DMYAKC
Sbjct: 607 SQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKC 666
Query: 322 GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
GSID + +F ++++ N+ WN+M+ GLA HG KE L++F +M+ GI+P+ VTF+ VL
Sbjct: 667 GSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVL 726
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPN 441
+AC+H+G V E SM DY I P IEHY C+ D L + GL++ A +I M+ E +
Sbjct: 727 SACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEAS 786
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIA 501
+ ++ LL+ C++ + E L+ LEP +S Y LL NMYA ++W E+ R
Sbjct: 787 ASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTM 846
Query: 502 MKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPE 558
MK V+K PG SW+E+ KIH+F D + + GYVPE
Sbjct: 847 MKGHKVKKD-PGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPE 902
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 171/368 (46%), Gaps = 19/368 (5%)
Query: 35 YANMIKTNANQDSFLMNQFIA---ACTTINLATHAFSHMDNPNALVYNALL------RTC 85
+A ++ N + FL+N I+ C ++ A F M + + + +N++L C
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 86 VHCHRSHQALACYVKMLRNGVVPTS-YSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
V QA + ++LR VV TS + S ++K C A ++ HG+ K G D
Sbjct: 122 V-VENIQQAFLLF-RILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGD 179
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM-- 202
FV LV Y G + + +F+EMP RD W M+ A++ G + A L
Sbjct: 180 EFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHS 239
Query: 203 ----PERNSATWNAMIDGY-AKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDV 257
P + A I G + +G ++ + ++I ++ Y + ++ +
Sbjct: 240 SGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSAL 299
Query: 258 VTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDM 317
+ F +MV + D+V +++ + +L LG++VH + G L + + +SLI+M
Sbjct: 300 LKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINM 359
Query: 318 YAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTF 377
Y K + VF + ++L WNS+I G+A +G EA+ +F ++ R G++P+ T
Sbjct: 360 YCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTM 419
Query: 378 VSVLTACT 385
SVL A +
Sbjct: 420 TSVLKAAS 427
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 168/412 (40%), Gaps = 74/412 (17%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAACTTINLATHA--FSHMDNPNALVYNALLRTCVHCH 89
+ V+ + IK N DSF+ I A + A N + + +NA++ H
Sbjct: 437 KQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNFDLVAWNAMMAGYTQSH 496
Query: 90 RSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQT 149
H+ L + M + G ++ +++ K C L GK VH + K G+D ++V +
Sbjct: 497 DGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSS 556
Query: 150 TLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------P 203
+++ Y G A+ FD +P D AWTTMIS + GE + A +F +M P
Sbjct: 557 GILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLP 616
Query: 204 ER------------------------NSATWN---------AMIDGYAKSGNIECAEILF 230
+ N+ N +++D YAK G+I+ A LF
Sbjct: 617 DEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLF 676
Query: 231 NRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALG 290
R+ ++ +W ++ +++ + + LF +M S G+ PD+V V+SAC+H G +
Sbjct: 677 KRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVS 736
Query: 291 LGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLA 350
+ H M +G+ K ++++ C + D L
Sbjct: 737 EAYK-HMRSMHGDYGI--------------------------KPEIEHYSC---LADALG 766
Query: 351 THGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
G K+A + M + + + ++L AC G E G+ ++E
Sbjct: 767 RAGLVKQAENLIESM---SMEASASMYRTLLAACRVQGDTETGKRVATKLLE 815
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 15/172 (8%)
Query: 289 LGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDG 348
L LGK H ++ + ++ ++LI MY+KCGS+ + VF K+ ++L WNS++
Sbjct: 55 LMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAA 114
Query: 349 LATHGYA-----KEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
A ++A +F + + + + +T +L C H+G+V S
Sbjct: 115 YAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASES-----FHG 169
Query: 404 YCISPGIEH----YGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
Y G++ G +V++ K G +++ + M + + +W +L
Sbjct: 170 YACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYR-DVVLWNLMLKA 220
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 172/558 (30%), Positives = 294/558 (52%), Gaps = 46/558 (8%)
Query: 17 LDQIKRCSK-REKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDN 72
L Q++ C++ R T ++++A+++K Q L N + A+HA F M +
Sbjct: 7 LHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH 66
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVV-PTSYSFSSLVKACTLLMDSAAGKT 131
+ + + ++L + S + L+ + + + + P + FS+LVKAC L G+
Sbjct: 67 RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGE 191
VH H + V+++LV+ Y+ +CG
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYA-------------------------------KCGL 155
Query: 192 VDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRN 251
++SA +FD + +N+ +W AM+ GYAKSG E A LF +P K++ SWT L++ + ++
Sbjct: 156 LNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQS 215
Query: 252 KRFGDVVTLFHEMV-SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI 310
+ + ++F EM R D + +++++ ACA+L A G++VH ++ GF V+I
Sbjct: 216 GKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFI 275
Query: 311 GSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGI 370
++LIDMYAKC + + +F +++ +++ W S+I G+A HG A++AL ++ +M G+
Sbjct: 276 SNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGV 335
Query: 371 RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL 430
+PN VTFV ++ AC+H GFVE+GR F SM +DY I P ++HY C++DLL + GL+++A
Sbjct: 336 KPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAE 395
Query: 431 EMIRGMTFEPNSFIWGALLSGCKL----HRNLEIANVAVQNLMILEPSNSGYYSLLVNMY 486
+I M F P+ W ALLS CK + IA+ V + + +PS Y LL N+Y
Sbjct: 396 NLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPST---YILLSNIY 452
Query: 487 AEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHV-NXXXXX 545
A + W +VS+ R + ++ V K PG S VE+ ++ +F A + H +
Sbjct: 453 ASASLWGKVSEARRKLGEMEVRKD-PGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKL 511
Query: 546 XXXXXXXAGYVPELGSIL 563
GYVP+ IL
Sbjct: 512 EEEMRIRNGYVPDTSWIL 529
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/482 (31%), Positives = 270/482 (56%), Gaps = 16/482 (3%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
+++A F M N + +N ++ R +AL + +M +V S++S+VKA
Sbjct: 125 LSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKA 180
Query: 120 CTLL--MDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAF 177
+D A ++++R V T +V+ + G +AR++FD MPER+
Sbjct: 181 LVQRGRIDEAM------NLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNII 234
Query: 178 AWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKD 237
+W MI+ + + +D A +LF MPER+ A+WN MI G+ ++ + A LF+RMP K+
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 238 VISWTTLMTCYSRNKRFGDVVTLFHEMVSRG-LAPDEVAMTTVISACAHLGALGLGKEVH 296
VISWTT++T Y NK + + +F +M+ G + P+ +++SAC+ L L G+++H
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH 354
Query: 297 HYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV--KNLFCWNSMIDGLATHGY 354
+ + + + S+L++MY+K G + + +F V ++L WNSMI A HG+
Sbjct: 355 QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Query: 355 AKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYG 414
KEA++M+++M + G +P+ VT++++L AC+HAG VE+G F ++ D + EHY
Sbjct: 415 GKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYT 474
Query: 415 CMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPS 474
C+VDL + G ++D I + +GA+LS C +H + IA V+ ++
Sbjct: 475 CLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSD 534
Query: 475 NSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHT 534
++G Y L+ N+YA + +E +++R+ MK+ G++K PG SWV++ ++ HLF D H
Sbjct: 535 DAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQ-PGCSWVKVGKQNHLFVVGDKSHP 593
Query: 535 SY 536
+
Sbjct: 594 QF 595
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 186/393 (47%), Gaps = 50/393 (12%)
Query: 144 HVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP 203
+V T +V Y A +F EMPER+ +W TMI + + G +D A LFDEMP
Sbjct: 108 NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP 167
Query: 204 ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHE 263
ERN +WN+M+ + G I+ A LF RMP +DV+SWT ++ ++N + + LF
Sbjct: 168 ERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDC 227
Query: 264 MVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGS 323
M R + ++ +I+ A + ++ + F +++I + +
Sbjct: 228 MPERNI----ISWNAMITGYAQNNRIDEADQLFQVMPERDFA----SWNTMITGFIRNRE 279
Query: 324 IDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG-IRPNGVTFVSVLT 382
++++ +F ++ KN+ W +MI G + +EAL +FS+M R G ++PN T+VS+L+
Sbjct: 280 MNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Query: 383 ACTH-AGFVEEGR-----SRFVSMIEDYCISPGIEHYG-----------------CMVDL 419
AC+ AG VE + S+ V + S + Y C DL
Sbjct: 340 ACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDL 399
Query: 420 LSKGGLI---------EDALEM---IRGMTFEPNSFIWGALLSGCK----LHRNLEIANV 463
+S +I ++A+EM +R F+P++ + LL C + + +E
Sbjct: 400 ISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKD 459
Query: 464 AVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVS 496
V++ + P +Y+ LV++ R K+V+
Sbjct: 460 LVRDESL--PLREEHYTCLVDLCGRAGRLKDVT 490
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 150/324 (46%), Gaps = 39/324 (12%)
Query: 158 LGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER-NSATWNAMIDG 216
+G +ARK+FD +PERD WT +I+ +++ G++ A LFD + R N TW AM+ G
Sbjct: 59 VGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVTWTAMVSG 118
Query: 217 YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAM 276
Y +S + AE+LF MP ++V+SW T++ Y+++ R + LF EM R + V+
Sbjct: 119 YLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSW 174
Query: 277 TTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV 336
+++ A G + + + DV ++++D AK G +D + +F +
Sbjct: 175 NSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPE 230
Query: 337 KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGI-------------------------- 370
+N+ WN+MI G A + EA ++F M +
Sbjct: 231 RNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRM 290
Query: 371 -RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSK-GGLIED 428
N +++ +++T EE + F M+ D + P + Y ++ S GL+E
Sbjct: 291 PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEG 350
Query: 429 AL--EMIRGMTFEPNSFIWGALLS 450
++I + N + ALL+
Sbjct: 351 QQIHQLISKSVHQKNEIVTSALLN 374
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 50/281 (17%)
Query: 182 MISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPC-KDVIS 240
+I + G++ A +LFD +PER+ TW +I GY K G++ A LF+R+ K+V++
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRKNVVT 111
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
WT +++ Y R+K+ LF EM R
Sbjct: 112 WTAMVSGYLRSKQLSIAEMLFQEMPER--------------------------------- 138
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALK 360
+V +++ID YA+ G ID++L +F ++ +N+ WNSM+ L G EA+
Sbjct: 139 ------NVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMN 192
Query: 361 MFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLL 420
+F M R+ + V++ +++ G V+E R F M E IS + M+
Sbjct: 193 LFERMPRRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPERNIIS-----WNAMITGY 243
Query: 421 SKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIA 461
++ I++A ++ + M E + W +++G +R + A
Sbjct: 244 AQNNRIDEADQLFQVMP-ERDFASWNTMITGFIRNREMNKA 283
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 276 bits (706), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 166/546 (30%), Positives = 273/546 (50%), Gaps = 47/546 (8%)
Query: 32 ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
ES++A +KT+ ++ + + I+ + FS M NA+ + A++ VH
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHA 187
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
R + L + +M R+ + +Y+F+ +KAC L GK +H HV RGF + V
Sbjct: 188 GRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVA 247
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSA 208
+L Y+ G D +F+ M ERD +WT++I A+ R G+ A F +M RNS
Sbjct: 248 NSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKM--RNSQ 305
Query: 209 T---------------------W--------------------NAMIDGYAKSGNIECAE 227
W N+M+ Y+ GN+ A
Sbjct: 306 VPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSAS 365
Query: 228 ILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLG 287
+LF M C+D+ISW+T++ Y + + F M G P + A+ +++S ++
Sbjct: 366 VLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMA 425
Query: 288 ALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMID 347
+ G++VH + G + + SSLI+MY+KCGSI + ++F + ++ +MI+
Sbjct: 426 VIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMIN 485
Query: 348 GLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCIS 407
G A HG +KEA+ +F + + G RP+ VTF+SVLTACTH+G ++ G F M E Y +
Sbjct: 486 GYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMR 545
Query: 408 PGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQN 467
P EHYGCMVDLL + G + DA +MI M+++ + +W LL CK ++E A +
Sbjct: 546 PAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAKGDIERGRRAAER 605
Query: 468 LMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFA 527
++ L+P+ + L N+Y+ +E + +R MK GV K PG S ++I + F
Sbjct: 606 ILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKE-PGWSSIKIKDCVSAFV 664
Query: 528 ASDNYH 533
+ D +H
Sbjct: 665 SGDRFH 670
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 217/467 (46%), Gaps = 53/467 (11%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACY--VKMLRNGVVPTSYSFSSLVKAC 120
A F M + + + + ++++ V + S +AL + ++++ + V P + S ++KAC
Sbjct: 59 ARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKAC 118
Query: 121 TLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWT 180
+ A G+++H + K + V+V ++L++ Y +G + +VF EMP R+A WT
Sbjct: 119 GQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWT 178
Query: 181 TMISAHVRCGEVDSAARLFDEM--PERNSATW---------------------------- 210
+I+ V G F EM E S T+
Sbjct: 179 AIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVR 238
Query: 211 ---------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLF 261
N++ Y + G ++ LF M +DV+SWT+L+ Y R + V F
Sbjct: 239 GFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETF 298
Query: 262 HEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKC 321
+M + + P+E ++ SACA L L G+++H ++ G + + +S++ MY+ C
Sbjct: 299 IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTC 358
Query: 322 GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
G++ + ++F ++ +++ W+++I G G+ +E K FS M + G +P S+L
Sbjct: 359 GNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLL 418
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEH----YGCMVDLLSKGGLIEDALEMIRGMT 437
+ + +E GR + + G+E ++++ SK G I++A MI G T
Sbjct: 419 SVSGNMAVIEGGRQ-----VHALALCFGLEQNSTVRSSLINMYSKCGSIKEA-SMIFGET 472
Query: 438 FEPNSFIWGALLSGCKLH-RNLEIANVAVQNLMI-LEPSNSGYYSLL 482
+ A+++G H ++ E ++ ++L + P + + S+L
Sbjct: 473 DRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVL 519
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 120/245 (48%), Gaps = 12/245 (4%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM--VSRG 268
N+ + +GN+ A +F++MP D++SWT+++ Y + + LF M V
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 269 LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSL 328
++PD ++ V+ AC + G+ +H Y + VY+GSSL+DMY + G ID+S
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSC 163
Query: 329 LVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAG 388
VF ++ +N W ++I GL G KE L FSEM R + TF L AC
Sbjct: 164 RVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLR 223
Query: 389 FVEEGRSRFVSMIEDYCISPGIEHYGCMVDLL----SKGGLIEDALEMIRGMTFEPNSFI 444
V+ G++ I + I G C+ + L ++ G ++D L + M+ E +
Sbjct: 224 QVKYGKA-----IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS-ERDVVS 277
Query: 445 WGALL 449
W +L+
Sbjct: 278 WTSLI 282
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 276 bits (705), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 134/353 (37%), Positives = 214/353 (60%), Gaps = 2/353 (0%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
N+++ YA G++ A +F++MP KD+++W +++ ++ N + + + L+ EM S+G+
Sbjct: 27 NSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSKGIK 86
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
PD + +++SACA +GAL LGK VH Y++ G +++ + L+D+YA+CG ++ + +
Sbjct: 87 PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTL 146
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMER-KGIRPNGVTFVSVLTACTHAGF 389
F ++ KN W S+I GLA +G+ KEA+++F ME +G+ P +TFV +L AC+H G
Sbjct: 147 FDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGM 206
Query: 390 VEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALL 449
V+EG F M E+Y I P IEH+GCMVDLL++ G ++ A E I+ M +PN IW LL
Sbjct: 207 VKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLL 266
Query: 450 SGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEK 509
C +H + ++A A ++ LEP++SG Y LL NMYA RW +V KIR M GV+K
Sbjct: 267 GACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKK 326
Query: 510 TCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELGSI 562
PG S VE+ ++H F D H + GYVP++ ++
Sbjct: 327 V-PGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNV 378
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 98/161 (60%), Gaps = 2/161 (1%)
Query: 291 LGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLA 350
LG+ +H ++ +GFG +Y+ +SL+ +YA CG + + VF K+ K+L WNS+I+G A
Sbjct: 6 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 351 THGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGI 410
+G +EAL +++EM KGI+P+G T VS+L+AC G + G+ V MI+ ++ +
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIK-VGLTRNL 124
Query: 411 EHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
++DL ++ G +E+A + M + NS W +L+ G
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMV-DKNSVSWTSLIVG 164
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 136/294 (46%), Gaps = 46/294 (15%)
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
+ D G+T+H V + GF + ++VQ +L+ Y+ G A KVFD+MPE+D AW ++
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSV 60
Query: 183 ISAHVRCGEVDSAARLFDEM------PE-------------------------------- 204
I+ G+ + A L+ EM P+
Sbjct: 61 INGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGL 120
Query: 205 -RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHE 263
RN + N ++D YA+ G +E A+ LF+ M K+ +SWT+L+ + N + + LF
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKY 180
Query: 264 MVS-RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG--SSLIDMYAK 320
M S GL P E+ ++ AC+H G + G E + M + ++ I ++D+ A+
Sbjct: 181 MESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 321 CGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
G + ++ + ++ N+ W +++ HG + L F+ ++ + PN
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD--LAEFARIQILQLEPN 291
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 107/259 (41%), Gaps = 45/259 (17%)
Query: 32 ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
E++++ +I++ ++ N + A C + A F M + + +N+++
Sbjct: 8 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 67
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
+ +ALA Y +M G+ P ++ SL+ AC + GK VH ++ K G ++
Sbjct: 68 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSS 127
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMIS------------------------ 184
L++ Y+ G +A+ +FDEM ++++ +WT++I
Sbjct: 128 NVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGL 187
Query: 185 ------------AHVRCGEVDSAARLFDEMPERNSAT-----WNAMIDGYAKSGNIECAE 227
A CG V F M E + M+D A++G ++ A
Sbjct: 188 LPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAY 247
Query: 228 ILFNRMPCK-DVISWTTLM 245
MP + +V+ W TL+
Sbjct: 248 EYIKSMPMQPNVVIWRTLL 266
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 150/494 (30%), Positives = 254/494 (51%), Gaps = 42/494 (8%)
Query: 111 YSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDE 170
+ + +L+ AC G+ VH H+ K + +++T L+ FY DARKV DE
Sbjct: 53 HGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDE 112
Query: 171 MPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNS----------------------- 207
MPE++ +WT MIS + + G A +F EM +
Sbjct: 113 MPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 208 -------ATWN---------AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRN 251
WN +++D YAK+G I+ A +F +P +DV+S T ++ Y++
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 252 KRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG 311
+ + +FH + S G++P+ V ++++A + L L GK+ H +++ +
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM-ERKGI 370
+SLIDMY+KCG++ + +F + + WN+M+ G + HG +E L++F M + K +
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 371 RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE-DYCISPGIEHYGCMVDLLSKGGLIEDA 429
+P+ VT ++VL+ C+H + G + F M+ +Y PG EHYGC+VD+L + G I++A
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 430 LEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEV 489
E I+ M +P + + G+LL C++H +++I + L+ +EP N+G Y +L N+YA
Sbjct: 413 FEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASA 472
Query: 490 NRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXX 549
RW +V+ +R M V K PG SW++ Q +H F A+D H V
Sbjct: 473 GRWADVNNVRAMMMQKAVTKE-PGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIK 531
Query: 550 XXXAGYVPELGSIL 563
AGYVP+L +L
Sbjct: 532 MKQAGYVPDLSCVL 545
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 160/358 (44%), Gaps = 45/358 (12%)
Query: 25 KREKKTLESVYANMIKTNANQDSFLMNQ---FIAACTTINLATHAFSHMDNPNALVYNAL 81
KR + + V+A+MIKT ++L + F C + A M N + + A+
Sbjct: 65 KRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAM 124
Query: 82 LRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGF 141
+ S +AL + +M+R+ P ++F++++ +C GK +HG + K +
Sbjct: 125 ISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY 184
Query: 142 DAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDE 201
D+H+FV ++L++ Y+ G +AR++F+ +PERD + T +I+ + + G + A +F
Sbjct: 185 DSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHR 244
Query: 202 MPER----NSATW-----------------------------------NAMIDGYAKSGN 222
+ N T+ N++ID Y+K GN
Sbjct: 245 LHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 223 IECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV-SRGLAPDEVAMTTVIS 281
+ A LF+ MP + ISW ++ YS++ +V+ LF M + + PD V + V+S
Sbjct: 305 LSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLS 364
Query: 282 ACAHLGALGLGKEVHHYLMVNGFGLDVYIG--SSLIDMYAKCGSIDRSLLVFYKLQVK 337
C+H G + ++ +G ++DM + G ID + ++ K
Sbjct: 365 GCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 422
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 153/535 (28%), Positives = 272/535 (50%), Gaps = 41/535 (7%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F MD +++ YN ++ + +++ +++ L + P + SS+++AC
Sbjct: 261 ARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGH 319
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
L D + K ++ ++ K GF V+ L++ Y+ G AR VF+ M +D +W ++
Sbjct: 320 LRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSI 379
Query: 183 ISAHVRCGEVDSAARLFDEM----PERNSATW---------------------------- 210
IS +++ G++ A +LF M + + T+
Sbjct: 380 ISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGI 439
Query: 211 -------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHE 263
NA+ID YAK G + + +F+ M D ++W T+++ R F + + +
Sbjct: 440 CIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQ 499
Query: 264 MVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGS 323
M + PD + CA L A LGKE+H L+ G+ ++ IG++LI+MY+KCG
Sbjct: 500 MRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGC 559
Query: 324 IDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTA 383
++ S VF ++ +++ W MI +G ++AL+ F++ME+ GI P+ V F++++ A
Sbjct: 560 LENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 619
Query: 384 CTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSF 443
C+H+G V+EG + F M Y I P IEHY C+VDLLS+ I A E I+ M +P++
Sbjct: 620 CSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDAS 679
Query: 444 IWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMK 503
IW ++L C+ ++E A + ++ L P + GY L N YA + +W +VS IR ++K
Sbjct: 680 IWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLK 739
Query: 504 DLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPE 558
D + K PG SW+E+ + +H+F++ D+ + GY+P+
Sbjct: 740 DKHITKN-PGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPD 793
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 205/419 (48%), Gaps = 44/419 (10%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
N ++N+++R +AL Y K+ + V P Y+F S++KAC L D+ G V+
Sbjct: 70 NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVY 129
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVD 193
+ GF++ +FV LV+ YS +GL AR+VFDEMP RD +W ++IS + G +
Sbjct: 130 EQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYE 189
Query: 194 SAARLFDEMPER----NSATWNAMIDG--------------------------------- 216
A ++ E+ +S T ++++
Sbjct: 190 EALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLV 249
Query: 217 --YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEV 274
Y K A +F+ M +D +S+ T++ Y + + + V +F E + + PD +
Sbjct: 250 AMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ-FKPDLL 308
Query: 275 AMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL 334
+++V+ AC HL L L K +++Y++ GF L+ + + LID+YAKCG + + VF +
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSM 368
Query: 335 QVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGR 394
+ K+ WNS+I G G EA+K+F M + + +T++ +++ T ++ G+
Sbjct: 369 ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGK 428
Query: 395 SRFVSMIED-YCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGC 452
+ I+ CI + + ++D+ +K G + D+L++ M ++ W ++S C
Sbjct: 429 GLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSSMG-TGDTVTWNTVISAC 484
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 109/183 (59%), Gaps = 1/183 (0%)
Query: 213 MIDGYAKSGNIECAEILFNRM-PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAP 271
+ID Y+ + +F R+ P K+V W +++ +S+N F + + + ++ ++P
Sbjct: 45 LIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSP 104
Query: 272 DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVF 331
D+ +VI ACA L +G V+ ++ GF D+++G++L+DMY++ G + R+ VF
Sbjct: 105 DKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVF 164
Query: 332 YKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVE 391
++ V++L WNS+I G ++HGY +EAL+++ E++ I P+ T SVL A + V+
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVK 224
Query: 392 EGR 394
+G+
Sbjct: 225 QGQ 227
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/426 (21%), Positives = 165/426 (38%), Gaps = 75/426 (17%)
Query: 26 REKKTLESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALL 82
R+ + +Y M+K +S + N I A C + A F+ M+ + + +N+++
Sbjct: 321 RDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSII 380
Query: 83 RTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFD 142
+ +A+ + M+ ++ L+ T L D GK +H + K G
Sbjct: 381 SGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGIC 440
Query: 143 AHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM 202
+ V L++ Y+ G GD+ K+F M D W T+ISA VR G+ + ++ +M
Sbjct: 441 IDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQM 500
Query: 203 PER----NSATW-----------------------------------NAMIDGYAKSGNI 223
+ + AT+ NA+I+ Y+K G +
Sbjct: 501 RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCL 560
Query: 224 ECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISAC 283
E + +F RM +DV++WT ++ Y + F +M G+ PD V +I AC
Sbjct: 561 ENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYAC 620
Query: 284 AHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWN 343
+H G + G + + Y +I+ YA
Sbjct: 621 SHSGLVDEGLACFEKMKTH------YKIDPMIEHYA------------------------ 650
Query: 344 SMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
++D L+ +A + M I+P+ + SVL AC +G +E +IE
Sbjct: 651 CVVDLLSRSQKISKAEEFIQAMP---IKPDASIWASVLRACRTSGDMETAERVSRRIIEL 707
Query: 404 YCISPG 409
PG
Sbjct: 708 NPDDPG 713
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 167/581 (28%), Positives = 280/581 (48%), Gaps = 84/581 (14%)
Query: 34 VYANMIKTNANQDSFLMNQFIAACTT---INLATHAFSHMDNPNALVYNALLRTCVHCHR 90
++A ++ + D+FL ++ I+ T A H F + NA YNALL
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 91 SHQALACYVKML------RNGVVPTSYSFSSLVKA---CTLLMDSAAGKTVHGHVWKRGF 141
A + ++ + + P S S S ++KA C + + VHG V + GF
Sbjct: 104 YFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGF 163
Query: 142 DAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDE 201
D+ VFV ++ +Y+ ARKVFDEM ERD +W +MIS + + G + +++
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 202 M-------P---------------------------------ERNSATWNAMIDGYAKSG 221
M P + + + NA+I YAK G
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG 283
Query: 222 NIECAEILFNRMPCKDVI-------------------------------SWTTLMTCYSR 250
+++ A LF+ M KD + +W +++ +
Sbjct: 284 SLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQ 343
Query: 251 NKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI 310
N +V+ F EM+ G P+ V +++++ + + L GKE+H + + NG ++Y+
Sbjct: 344 NNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYV 403
Query: 311 GSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGI 370
+S+ID YAK G + + VF + ++L W ++I A HG + A +F +M+ G
Sbjct: 404 TTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGT 463
Query: 371 RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL 430
+P+ VT +VL+A H+G + + F SM+ Y I PG+EHY CMV +LS+ G + DA+
Sbjct: 464 KPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAM 523
Query: 431 EMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVN 490
E I M +P + +WGALL+G + +LEIA A L +EP N+G Y+++ N+Y +
Sbjct: 524 EFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAG 583
Query: 491 RWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDN 531
RW+E +R MK +G++K PG+SW+E + + F A D+
Sbjct: 584 RWEEAEMVRNKMKRIGLKKI-PGTSWIETEKGLRSFIAKDS 623
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 180/628 (28%), Positives = 296/628 (47%), Gaps = 85/628 (13%)
Query: 8 KIHTLKDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFI---AACTTINLAT 64
K T +D +L K ++R+ T +S++A +K+ ++L N F+ + C ++ A
Sbjct: 7 KFKTFRDLLL---KSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYAR 63
Query: 65 HAFSHMDNPNALVYNALLR-----TCVHCHR--------------------------SHQ 93
AF + PN YN +++ + +H R +
Sbjct: 64 AAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFA 123
Query: 94 ALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVE 153
A+ + +M + G ++ S L+ AC +D K +H GFD++ V V
Sbjct: 124 AMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVT 181
Query: 154 FYSMLGLAGDARKVFDEMPE-RDAFAWTTMISAHVRCGEVDSAARLFDEMP--------- 203
+YS GL +A VF M E RD +W +MI A+ + E A L+ EM
Sbjct: 182 YYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMF 241
Query: 204 ------------------------------ERNSATWNAMIDGYAKSGNIEC---AEILF 230
+NS + +ID Y+K G + +E +F
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301
Query: 231 NRMPCKDVISWTTLMTCYSRNKRFGD-VVTLFHEMVSRGLAPDEVAMTTVISACAHLGAL 289
+ D++ W T+++ YS N+ + V F +M G PD+ + V SAC++L +
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP 361
Query: 290 GLGKEVHHYLMVNGFGLD-VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDG 348
K++H + + + + + ++LI +Y K G++ + VF ++ N +N MI G
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKG 421
Query: 349 LATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISP 408
A HG+ EAL ++ M GI PN +TFV+VL+AC H G V+EG+ F +M E + I P
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP 481
Query: 409 GIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNL 468
EHY CM+DLL + G +E+A I M ++P S W ALL C+ H+N+ +A A L
Sbjct: 482 EAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANEL 541
Query: 469 MILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAA 528
M+++P + Y +L NMYA+ +W+E++ +R +M+ + K PG SW+E+ +K H+F A
Sbjct: 542 MVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKK-PGCSWIEVKKKKHVFVA 600
Query: 529 SDNYHTSYGHVNXXXXXXXXXXXXAGYV 556
D H VN GYV
Sbjct: 601 EDWSHPMIREVNEYLEEMMKKMKKVGYV 628
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/526 (31%), Positives = 265/526 (50%), Gaps = 46/526 (8%)
Query: 34 VYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQ 93
V + ++T+ N + L++ + + F +A+ + +++ V +
Sbjct: 87 VVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVK 146
Query: 94 ALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVE 153
AL +V+M+ G+ ++ SS VKAC+ L + G+ HG V GF+ + F+ +TL
Sbjct: 147 ALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAY 206
Query: 154 FYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM-------PE-- 204
Y + DAR+VFDEMPE D WT ++SA + + A LF M P+
Sbjct: 207 LYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGS 266
Query: 205 -------------------------------RNSATWNAMIDGYAKSGNIECAEILFNRM 233
N ++++D Y K G++ A +FN M
Sbjct: 267 TFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGM 326
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK 293
K+ +SW+ L+ Y +N + +F EM + D TV+ ACA L A+ LGK
Sbjct: 327 SKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGK 382
Query: 294 EVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHG 353
E+H + G +V + S+LID+Y K G ID + V+ K+ ++N+ WN+M+ LA +G
Sbjct: 383 EIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNG 442
Query: 354 YAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHY 413
+EA+ F++M +KGI+P+ ++F+++LTAC H G V+EGR+ FV M + Y I PG EHY
Sbjct: 443 RGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHY 502
Query: 414 GCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNL-EIANVAVQNLMILE 472
CM+DLL + GL E+A ++ ++ +WG LL C + + +A + +M LE
Sbjct: 503 SCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELE 562
Query: 473 PSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVE 518
P Y LL NMY + R + IR M GV KT G SW++
Sbjct: 563 PKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTV-GQSWID 607
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 119/423 (28%), Positives = 192/423 (45%), Gaps = 48/423 (11%)
Query: 106 VVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLA-GDA 164
+ T ++SL++ C + G H HV K G + V +L+ Y LG +
Sbjct: 57 IPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRET 116
Query: 165 RKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKS 220
R+VFD +DA +WT+M+S +V E A +F EM + N T ++ + ++
Sbjct: 117 RRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSEL 176
Query: 221 GNIEC-----------------------------------AEILFNRMPCKDVISWTTLM 245
G + A +F+ MP DVI WT ++
Sbjct: 177 GEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVL 236
Query: 246 TCYSRNKRFGDVVTLFHEM-VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGF 304
+ +S+N + + + LF+ M +GL PD TV++AC +L L GKE+H L+ NG
Sbjct: 237 SAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGI 296
Query: 305 GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSE 364
G +V + SSL+DMY KCGS+ + VF + KN W++++ G +G ++A+++F E
Sbjct: 297 GSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFRE 356
Query: 365 MERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGG 424
ME K + F +VL AC V G+ + C I ++DL K G
Sbjct: 357 MEEKDL----YCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE-SALIDLYGKSG 411
Query: 425 LIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVN 484
I+ A + M+ N W A+LS + E A V+ N M+ + Y S +
Sbjct: 412 CIDSASRVYSKMSIR-NMITWNAMLSALAQNGRGEEA-VSFFNDMVKKGIKPDYISFIAI 469
Query: 485 MYA 487
+ A
Sbjct: 470 LTA 472
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 172/361 (47%), Gaps = 43/361 (11%)
Query: 20 IKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINL----ATHAFSHMDNPNA 75
+K CS+ + L + ++ T+ + + ++ +A +N A F M P+
Sbjct: 170 VKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDV 229
Query: 76 LVYNALLRTCVHCHRSHQALACYVKMLR-NGVVPTSYSFSSLVKACTLLMDSAAGKTVHG 134
+ + A+L +AL + M R G+VP +F +++ AC L GK +HG
Sbjct: 230 ICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHG 289
Query: 135 HVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDS 194
+ G ++V V+++L++ Y G +AR+VF+ M ++++ +W+ ++ + + GE +
Sbjct: 290 KLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEK 349
Query: 195 AARLFDEMPER-----------------------------------NSATWNAMIDGYAK 219
A +F EM E+ N +A+ID Y K
Sbjct: 350 AIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGK 409
Query: 220 SGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTV 279
SG I+ A ++++M +++I+W +++ ++N R + V+ F++MV +G+ PD ++ +
Sbjct: 410 SGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAI 469
Query: 280 ISACAHLGALGLGKEVHHYLMVNGFGLDVYIG--SSLIDMYAKCGSIDRSLLVFYKLQVK 337
++AC H G + G+ + LM +G+ S +ID+ + G + + + + + +
Sbjct: 470 LTACGHTGMVDEGRN-YFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECR 528
Query: 338 N 338
N
Sbjct: 529 N 529
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 272 bits (695), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 167/594 (28%), Positives = 292/594 (49%), Gaps = 48/594 (8%)
Query: 14 DKILDQIKRCSKREKKTL-ESVYANMIKTNAN---QDSFLMNQFI---AACTTINLATHA 66
D++ + +K C+ + ES++A++I TN + +D++ +N I C A
Sbjct: 32 DRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKL 91
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNG-VVPTSYSFSSLVKACTLLMD 125
F M N + + A+++ + + L + M +G P + + + K+C+
Sbjct: 92 FDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGR 151
Query: 126 SAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISA 185
GK HG K G +H FV+ TLV YS+ G+A +V D++P D +++ +S
Sbjct: 152 IEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSG 211
Query: 186 HVRCGEVD----------------------SAARLFDEMPERNSATW------------- 210
++ CG S+ RLF + + N A
Sbjct: 212 YLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNAE 271
Query: 211 ----NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVS 266
A+I+ Y K G + A+ +F+ +++ TT+M Y ++K F + + LF +M +
Sbjct: 272 VEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDT 331
Query: 267 RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDR 326
+ + P+E ++++ A L L G +H ++ +G+ V +G++L++MYAK GSI+
Sbjct: 332 KEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIED 391
Query: 327 SLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
+ F + +++ WN+MI G + HG +EAL+ F M G PN +TF+ VL AC+H
Sbjct: 392 ARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSH 451
Query: 387 AGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWG 446
GFVE+G F +++ + + P I+HY C+V LLSK G+ +DA + +R E + W
Sbjct: 452 IGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWR 511
Query: 447 ALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLG 506
LL+ C + RN + + + P++SG Y LL N++A+ W+ V+K+R M + G
Sbjct: 512 TLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMNNRG 571
Query: 507 VEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELG 560
V+K PG SW+ I + H+F A DN H + GY P++
Sbjct: 572 VKKE-PGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVA 624
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/498 (31%), Positives = 255/498 (51%), Gaps = 44/498 (8%)
Query: 60 INLATHAFSHMDN-PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVK 118
I+L+ F +D+ + N ++ + + +A+ + +ML+ G+ +S SL+
Sbjct: 402 IDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLS 461
Query: 119 ACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA 178
L GK VHG+ K G + V ++L YS G ++ K+F +P +D
Sbjct: 462 VLDCL---NLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNAC 518
Query: 179 WTTMISAHVRCGEVDSAARLFDEM------PERNSAT----------------------- 209
W +MIS G + A LF EM P+ ++
Sbjct: 519 WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTL 578
Query: 210 ----------WNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVT 259
+A+++ Y+K G+++ A +++R+P D +S ++L++ YS++ D
Sbjct: 579 RAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFL 638
Query: 260 LFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYA 319
LF +MV G D A+++++ A A LG +VH Y+ G + +GSSL+ MY+
Sbjct: 639 LFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYS 698
Query: 320 KCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVS 379
K GSID F ++ +L W ++I A HG A EAL++++ M+ KG +P+ VTFV
Sbjct: 699 KFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVG 758
Query: 380 VLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE 439
VL+AC+H G VEE SM++DY I P HY CMVD L + G + +A I M +
Sbjct: 759 VLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIK 818
Query: 440 PNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIR 499
P++ +WG LL+ CK+H +E+ VA + + LEPS++G Y L N+ AEV W EV + R
Sbjct: 819 PDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETR 878
Query: 500 IAMKDLGVEKTCPGSSWV 517
MK GV+K PG S V
Sbjct: 879 KLMKGTGVQKE-PGWSSV 895
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/394 (29%), Positives = 194/394 (49%), Gaps = 58/394 (14%)
Query: 108 PTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKV 167
P SY++SS++ AC L GK V V K G + VFV T +V+ Y+ G +A +V
Sbjct: 249 PDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEV 307
Query: 168 FDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER---------------------- 205
F +P +WT M+S + + + SA +F EM
Sbjct: 308 FSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMV 367
Query: 206 -----------------NSATWNAMIDGYAKSGNIECAEILF---NRMPCKDVISWTTLM 245
+S+ A+I Y+KSG+I+ +E +F + + +++++ ++
Sbjct: 368 CEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMI 425
Query: 246 TCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFG 305
T +S++K+ G + LF M+ GL DE ++ +++S L L LGK+VH Y + +G
Sbjct: 426 TSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLV 482
Query: 306 LDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM 365
LD+ +GSSL +Y+KCGS++ S +F + K+ CW SMI G +GY +EA+ +FSEM
Sbjct: 483 LDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEM 542
Query: 366 ERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH----YGCMVDLLS 421
G P+ T +VLT C+ + G+ I Y + GI+ +V++ S
Sbjct: 543 LDDGTSPDESTLAAVLTVCSSHPSLPRGKE-----IHGYTLRAGIDKGMDLGSALVNMYS 597
Query: 422 KGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
K G ++ A ++ + E + +L+SG H
Sbjct: 598 KCGSLKLARQVYDRLP-ELDPVSCSSLISGYSQH 630
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 198/432 (45%), Gaps = 52/432 (12%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F + P+ + N ++ ++L + KM G S+ S++ AC+
Sbjct: 103 AAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSA 162
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
L + V H K G+ + V++ L++ +S DA KVF + + + W T+
Sbjct: 163 LQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTI 222
Query: 183 ISAHVRCGEVDSAARLFDEM----PERNSATWN--------------------------- 211
I+ +R + LF EM + +S T++
Sbjct: 223 IAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGA 282
Query: 212 -------AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM 264
A++D YAK G++ A +F+R+P V+SWT +++ Y+++ + +F EM
Sbjct: 283 EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEM 342
Query: 265 VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSI 324
G+ + +T+VISAC + +VH ++ +GF LD + ++LI MY+K G I
Sbjct: 343 RHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDI 402
Query: 325 DRSLLVFYKL---QVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
D S VF L Q +N+ N MI + +A+++F+ M ++G+R + + S+L
Sbjct: 403 DLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL 460
Query: 382 TA--CTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE 439
+ C + G G + ++ D + + L SK G +E++ ++ +G+ F+
Sbjct: 461 SVLDCLNLGKQVHGYTLKSGLVLDLTVGSS------LFTLYSKCGSLEESYKLFQGIPFK 514
Query: 440 PNSFIWGALLSG 451
N+ W +++SG
Sbjct: 515 DNA-CWASMISG 525
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 214/495 (43%), Gaps = 59/495 (11%)
Query: 23 CSKREKKTL-ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVY 78
C+ EK + V A +IK A +D F+ + A C + A FS + NP+ + +
Sbjct: 261 CASLEKLRFGKVVQARVIKCGA-EDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSW 319
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWK 138
+L + + AL + +M +GV + + +S++ AC VH V+K
Sbjct: 320 TVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFK 379
Query: 139 RGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE-RDAFAWTTMISAHVRCGEVDSAAR 197
GF V L+ YS G + +VF+++ + + MI++ + + A R
Sbjct: 380 SGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIR 439
Query: 198 LFDEMPERNSAT------------------------------------WNAMIDGYAKSG 221
LF M + T +++ Y+K G
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCG 499
Query: 222 NIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVIS 281
++E + LF +P KD W ++++ ++ + + LF EM+ G +PDE + V++
Sbjct: 500 SLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLT 559
Query: 282 ACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFC 341
C+ +L GKE+H Y + G + +GS+L++MY+KCGS+ + V+ +L +
Sbjct: 560 VCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVS 619
Query: 342 WNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS--RFVS 399
+S+I G + HG ++ +F +M G + S+L A + G +++
Sbjct: 620 CSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYIT 679
Query: 400 MIEDYCISPGIEHYGCMVDLLSKGGLIED---ALEMIRGMTFEPNSFIWGALLSGCKLHR 456
I C P + ++ + SK G I+D A I G P+ W AL++ H
Sbjct: 680 KI-GLCTEPSVG--SSLLTMYSKFGSIDDCCKAFSQING----PDLIAWTALIASYAQHG 732
Query: 457 NLEIANVAVQ--NLM 469
AN A+Q NLM
Sbjct: 733 K---ANEALQVYNLM 744
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 140/306 (45%), Gaps = 45/306 (14%)
Query: 130 KTVHGHVWKR---GFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAH 186
K + H+ +R FD VF+ +L+ +YS G DA K+FD +P+ D + MIS +
Sbjct: 68 KILQAHLLRRYLLPFD--VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGY 125
Query: 187 VRCGEVDSAARLFDEMP----ERNSATW-------------------------------- 210
+ + + R F +M E N ++
Sbjct: 126 KQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYE 185
Query: 211 ---NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSR 267
+A+ID ++K+ E A +F +V W T++ RN+ +G V LFHEM
Sbjct: 186 VVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVG 245
Query: 268 GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRS 327
PD ++V++ACA L L GK V ++ G DV++ ++++D+YAKCG + +
Sbjct: 246 FQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAKCGHMAEA 304
Query: 328 LLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHA 387
+ VF ++ ++ W M+ G A AL++F EM G+ N T SV++AC
Sbjct: 305 MEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRP 364
Query: 388 GFVEEG 393
V E
Sbjct: 365 SMVCEA 370
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 123/243 (50%), Gaps = 9/243 (3%)
Query: 212 AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAP 271
+++ Y+ SG++ A LF+ +P DV+S +++ Y +++ F + + F +M G
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFLGFEA 148
Query: 272 DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVF 331
+E++ +VISAC+ L A + V + + G+ + S+LID+++K + + VF
Sbjct: 149 NEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVF 208
Query: 332 YKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVE 391
N++CWN++I G + +F EM +P+ T+ SVL AC
Sbjct: 209 RDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASL---- 264
Query: 392 EGRSRFVSMIEDYCISPGIEH-YGC--MVDLLSKGGLIEDALEMIRGMTFEPNSFIWGAL 448
+ RF +++ I G E + C +VDL +K G + +A+E+ + P+ W +
Sbjct: 265 -EKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-NPSVVSWTVM 322
Query: 449 LSG 451
LSG
Sbjct: 323 LSG 325
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 116/256 (45%), Gaps = 13/256 (5%)
Query: 47 SFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGV 106
S L+N + + C ++ LA + + + + ++L+ + M+ +G
Sbjct: 590 SALVNMY-SKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGF 648
Query: 107 VPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARK 166
S++ SS++KA L +S+ G VH ++ K G V ++L+ YS G D K
Sbjct: 649 TMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCK 708
Query: 167 VFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGN 222
F ++ D AWT +I+++ + G+ + A ++++ M E+ + T+ ++ + G
Sbjct: 709 AFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGL 768
Query: 223 IECAEILFNRMPCKDVIS-----WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMT 277
+E + N M I + ++ R+ R + + + M + PD +
Sbjct: 769 VEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNM---HIKPDALVWG 825
Query: 278 TVISACAHLGALGLGK 293
T+++AC G + LGK
Sbjct: 826 TLLAACKIHGEVELGK 841
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 274/531 (51%), Gaps = 80/531 (15%)
Query: 21 KRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTI-NLATH------AFSHMDNP 73
+RC+ K ++S ++ I +++++ +++ + A + NL H F ++ P
Sbjct: 19 QRCNT--VKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIP 76
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRN---GVVPTSYSFSSLVKACTLLMDSAAGK 130
N+ VY+ ++R C + H L ++ M++ + P+ +F L+ AC + GK
Sbjct: 77 NSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGK 136
Query: 131 TVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCG 190
+H V K G VF+ D+ T ++ +V
Sbjct: 137 QIHCWVVKNG----VFLS--------------------------DSHVQTGVLRIYVEDK 166
Query: 191 EVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSR 250
+ A ++FDE+P+ DV+ W LM Y R
Sbjct: 167 LLLDARKVFDEIPQ-------------------------------PDVVKWDVLMNGYVR 195
Query: 251 NKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGF-GLDVY 309
+ + +F EM+ +GL PDE ++TT ++ACA +GAL GK +H ++ + DV+
Sbjct: 196 CGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVF 255
Query: 310 IGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK- 368
+G++L+DMYAKCG I+ ++ VF KL +N+F W ++I G A +GYAK+A+ +ER+
Sbjct: 256 VGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERED 315
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIED 428
GI+P+ V + VL AC H GF+EEGRS +M Y I+P EHY C+VDL+ + G ++D
Sbjct: 316 GIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDD 375
Query: 429 ALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSN----SGYYSLLVN 484
AL +I M +P + +WGALL+GC+ H+N+E+ +AV+NL+ LE N L N
Sbjct: 376 ALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSN 435
Query: 485 MYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTS 535
+Y V R E SK+R ++ GV KT PG S +E++ + F + D H +
Sbjct: 436 IYFSVQRNPEASKVRGMIEQRGVRKT-PGWSVLEVDGNVTKFVSGDVSHPN 485
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 134/286 (46%), Gaps = 13/286 (4%)
Query: 178 AWTTMISAHVRCG---EVDSAARLFD-EMPERNSATWNAMIDGYAKSGNIE----CAEIL 229
+W ++I A RC ++ S LF RN+ + ++ + N+ A +
Sbjct: 10 SWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSI 69
Query: 230 FNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV---SRGLAPDEVAMTTVISACAHL 286
F+ + + + T++ SR+ + + F MV +AP + +I AC
Sbjct: 70 FDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKA 129
Query: 287 GALGLGKEVHHYLMVNGFGL-DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSM 345
+GK++H +++ NG L D ++ + ++ +Y + + + VF ++ ++ W+ +
Sbjct: 130 CFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVL 189
Query: 346 IDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYC 405
++G G E L++F EM KG+ P+ + + LTAC G + +G+ + +
Sbjct: 190 MNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSW 249
Query: 406 ISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
I + +VD+ +K G IE A+E+ + +T N F W AL+ G
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFKKLT-RRNVFSWAALIGG 294
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 144/435 (33%), Positives = 241/435 (55%), Gaps = 11/435 (2%)
Query: 139 RGFDAH-VFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVD 193
RG D F T++ Y + +A ++EM +R D F + ++ A R +
Sbjct: 90 RGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIR 149
Query: 194 SAARL----FDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYS 249
++ F E + N++I+ Y + G +E + +F ++ K SW+++++ +
Sbjct: 150 EGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARA 209
Query: 250 RNKRFGDVVTLFHEMVSR-GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDV 308
+ + + LF M S L +E M + + ACA+ GAL LG +H +L+ N L++
Sbjct: 210 GMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNI 269
Query: 309 YIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
+ +SL+DMY KCG +D++L +F K++ +N +++MI GLA HG + AL+MFS+M ++
Sbjct: 270 IVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKE 329
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIED 428
G+ P+ V +VSVL AC+H+G V+EGR F M+++ + P EHYGC+VDLL + GL+E+
Sbjct: 330 GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEE 389
Query: 429 ALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAE 488
ALE I+ + E N IW LS C++ +N+E+ +A Q L+ L N G Y L+ N+Y++
Sbjct: 390 ALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQ 449
Query: 489 VNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXX 548
W +V++ R + G+++T PG S VE+ K H F + D H +
Sbjct: 450 GQMWDDVARTRTEIAIKGLKQT-PGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEW 508
Query: 549 XXXXAGYVPELGSIL 563
GY P+L IL
Sbjct: 509 QLKFEGYSPDLTQIL 523
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 150/331 (45%), Gaps = 42/331 (12%)
Query: 58 TTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLV 117
++N A F +D+P +N ++R V+ +AL Y +M++ G P ++++ L+
Sbjct: 80 NSMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLL 139
Query: 118 KACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAF 177
KACT L GK +HG V+K G +A VFVQ +L+ Y G + VF+++ + A
Sbjct: 140 KACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAA 199
Query: 178 AWTTMISAHV--------------RCGEVDSAAR-------------------------- 197
+W++M+SA C E + A
Sbjct: 200 SWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGF 259
Query: 198 LFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDV 257
L + E N +++D Y K G ++ A +F +M ++ ++++ +++ + +
Sbjct: 260 LLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESA 319
Query: 258 VTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNG-FGLDVYIGSSLID 316
+ +F +M+ GL PD V +V++AC+H G + G+ V ++ G L+D
Sbjct: 320 LRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVD 379
Query: 317 MYAKCGSIDRSLLVFYKLQV-KNLFCWNSMI 346
+ + G ++ +L + + KN W + +
Sbjct: 380 LLGRAGLLEEALETIQSIPIEKNDVIWRTFL 410
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 157/551 (28%), Positives = 282/551 (51%), Gaps = 46/551 (8%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIA---ACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
+ V+ ++++ D ++N I C + A F M + + +NA++
Sbjct: 216 KEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFEN 275
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
H+ L + M V P + +S++ AC LL D G+ +H +V GF + V
Sbjct: 276 GMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVC 335
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAH---------------------- 186
+L + Y G +A K+F M +D +WTTMIS +
Sbjct: 336 NSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVK 395
Query: 187 -------------VRCGEVDSAARLFDEMPERNSATW----NAMIDGYAKSGNIECAEIL 229
G++D+ L + ++ N +I+ Y+K I+ A +
Sbjct: 396 PDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDI 455
Query: 230 FNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGAL 289
F+ +P K+VISWT+++ N R + + +M L P+ + +T ++ACA +GAL
Sbjct: 456 FHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPNAITLTAALAACARIGAL 514
Query: 290 GLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGL 349
GKE+H +++ G GLD ++ ++L+DMY +CG ++ + F Q K++ WN ++ G
Sbjct: 515 MCGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNS-QKKDVTSWNILLTGY 573
Query: 350 ATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPG 409
+ G +++F M + +RP+ +TF+S+L C+ + V +G F S +EDY ++P
Sbjct: 574 SERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYF-SKMEDYGVTPN 632
Query: 410 IEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLM 469
++HY C+VDLL + G +++A + I+ M P+ +WGALL+ C++H +++ ++ Q++
Sbjct: 633 LKHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIF 692
Query: 470 ILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAAS 529
L+ + GYY LL N+YA+ +W+EV+K+R MK+ G+ G SWVE+ K+H F +
Sbjct: 693 ELDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVD-AGCSWVEVKGKVHAFLSD 751
Query: 530 DNYHTSYGHVN 540
D YH +N
Sbjct: 752 DKYHPQTKEIN 762
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 116/415 (27%), Positives = 187/415 (45%), Gaps = 45/415 (10%)
Query: 3 NFQHCKIHTLKDKILDQIKRCS-KREKKTLESVYANMIKTNANQDSFLMNQFIAACTTI- 60
+ Q ++ +D + ++ C KR ++ VY+ + + ++ L N F+A
Sbjct: 84 SMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFG 143
Query: 61 NL--ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLR-NGVVPTSYSFSSLV 117
NL A + F M N +N L+ +A+ Y +ML GV P Y+F ++
Sbjct: 144 NLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVL 203
Query: 118 KACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAF 177
+ C + D A GK VH HV + G++ + V L+ Y G AR +FD MP RD
Sbjct: 204 RTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDII 263
Query: 178 AWTTMISAHVRCGEVDSAARLFDEM------PERNSAT---------------------- 209
+W MIS + G LF M P+ + T
Sbjct: 264 SWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYV 323
Query: 210 -----------WNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVV 258
N++ Y +G+ AE LF+RM KD++SWTT+++ Y N +
Sbjct: 324 ITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAI 383
Query: 259 TLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMY 318
+ M + PDE+ + V+SACA LG L G E+H + V + ++LI+MY
Sbjct: 384 DTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMY 443
Query: 319 AKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
+KC ID++L +F+ + KN+ W S+I GL + EAL +M + ++PN
Sbjct: 444 SKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTLQPN 497
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 106/200 (53%), Gaps = 6/200 (3%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV-SRGL 269
NA + + + GN+ A +F +M +++ SW L+ Y++ F + + L+H M+ G+
Sbjct: 133 NAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGV 192
Query: 270 APDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLL 329
PD V+ C + L GKEVH +++ G+ LD+ + ++LI MY KCG + + L
Sbjct: 193 KPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARL 252
Query: 330 VFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGF 389
+F ++ +++ WN+MI G +G E L++F M + P+ +T SV++AC G
Sbjct: 253 LFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 390 VEEGRSRFVSMIEDYCISPG 409
GR I Y I+ G
Sbjct: 313 RRLGRD-----IHAYVITTG 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 121/297 (40%), Gaps = 47/297 (15%)
Query: 251 NKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI 310
N + + + L + M +A DE ++ C A G +V+ + + L V +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 311 GSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM-ERKG 369
G++ + M+ + G++ + VF K+ +NLF WN ++ G A GY EA+ ++ M G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGG 191
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE--------------------------- 402
++P+ TF VL C + G+ V ++
Sbjct: 192 VKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSAR 251
Query: 403 ---DYCISPGIEHYGCMVDLLSKGGLIEDALEM---IRGMTFEPNSFIWGALLSGC---- 452
D I + M+ + G+ + LE+ +RG++ +P+ +++S C
Sbjct: 252 LLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLG 311
Query: 453 --KLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKI--RIAMKDL 505
+L R++ + + + NS L MY W+E K+ R+ KD+
Sbjct: 312 DRRLGRDIHAYVITTGFAVDISVCNS-----LTQMYLNAGSWREAEKLFSRMERKDI 363
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 165/536 (30%), Positives = 269/536 (50%), Gaps = 46/536 (8%)
Query: 7 CKIHTLKDKILDQIKRCSKREKKTLESVYANMIKTNANQDSF--LMNQFIAACTTINLAT 64
C + + ++D +CS + + V+ +M + N+ ++ L+ ++ A A
Sbjct: 102 CASLPVNNSLIDMYGKCS--DTLSANKVFRDMCCDSRNEVTWCSLLFAYMNA-EQFEAAL 158
Query: 65 HAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLM 124
F M A +N ++ HC + L+ + +ML + P Y+FSSL+ AC+
Sbjct: 159 DVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS--A 216
Query: 125 DSAA---GKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTT 181
DS+ G+ VH + K G+ + V + +++ FY+ LG DA M E ++ T
Sbjct: 217 DSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDA------MRELESIEVLT 270
Query: 182 MISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISW 241
+S WN++ID K G E A +F+ P K++++W
Sbjct: 271 QVS-------------------------WNSIIDACMKIGETEKALEVFHLAPEKNIVTW 305
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
TT++T Y RN + F EM+ G+ D A V+ AC+ L LG GK +H L+
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIH 365
Query: 302 NGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKM 361
GF Y+G++L+++YAKCG I + F + K+L WN+M+ HG A +ALK+
Sbjct: 366 CGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKL 425
Query: 362 FSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLS 421
+ M GI+P+ VTF+ +LT C+H+G VEEG F SM++DY I ++H CM+D+
Sbjct: 426 YDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFG 485
Query: 422 KGGLIEDALEMIRG----MTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSG 477
+GG + +A ++ +T N+ W LL C H + E+ + L I EPS
Sbjct: 486 RGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEM 545
Query: 478 YYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYH 533
+ LL N+Y RWKE +R M + G++KT PG SW+E+ ++ F D+ H
Sbjct: 546 SFVLLSNLYCSTGRWKEGEDVRREMVERGMKKT-PGCSWIEVGNQVSTFVVGDSSH 600
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/447 (25%), Positives = 200/447 (44%), Gaps = 31/447 (6%)
Query: 54 IAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSF 113
+A I A F M + + +N +L + +A+A + ++ + P YSF
Sbjct: 14 LAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSF 73
Query: 114 SSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEM-- 171
++++ C L + G+ + V + GF A + V +L++ Y A KVF +M
Sbjct: 74 TAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFN 231
R+ W +++ A++ + ++A +F EMP+R + WN MI G+A G +E LF
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 232 RM------PCKDVISWTTLM---TCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA 282
M P D ++++LM + S N +G +V M+ G + A +V+S
Sbjct: 194 EMLESEFKP--DCYTFSSLMNACSADSSNVVYGRMVHAV--MLKNGWSSAVEAKNSVLSF 249
Query: 283 CAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCW 342
LG+ + V L +S+ID K G +++L VF+ KN+ W
Sbjct: 250 YTKLGSRDDAMRELESIEV----LTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTW 305
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
+MI G +G ++AL+ F EM + G+ + + +VL AC+ + G+ MI
Sbjct: 306 TTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGK-----MIH 360
Query: 403 DYCISPGIEHYG----CMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNL 458
I G + Y +V+L +K G I++A + G + W +L +H
Sbjct: 361 GCLIHCGFQGYAYVGNALVNLYAKCGDIKEA-DRAFGDIANKDLVSWNTMLFAFGVHGLA 419
Query: 459 EIANVAVQNLMI--LEPSNSGYYSLLV 483
+ A N++ ++P N + LL
Sbjct: 420 DQALKLYDNMIASGIKPDNVTFIGLLT 446
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 139/307 (45%), Gaps = 47/307 (15%)
Query: 214 IDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDE 273
I AKSG I A +F+ MP D ++W T++T YSR + + LF ++ PD+
Sbjct: 11 IASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDD 70
Query: 274 VAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG----------- 322
+ T ++S CA LG + G+++ ++ +GF + + +SLIDMY KC
Sbjct: 71 YSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRD 130
Query: 323 ----------------------SIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALK 360
+ +L VF ++ + F WN MI G A G + L
Sbjct: 131 MCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLS 190
Query: 361 MFSEMERKGIRPNGVTFVSVLTACT-HAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDL 419
+F EM +P+ TF S++ AC+ + V GR M+++ S +E ++
Sbjct: 191 LFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN-GWSSAVEAKNSVLSF 249
Query: 420 LSKGGLIEDA---LEMIRGMTFEPNSFIWGALLSGC----KLHRNLEIANVAVQ-NLMIL 471
+K G +DA LE I +T W +++ C + + LE+ ++A + N++
Sbjct: 250 YTKLGSRDDAMRELESIEVLT----QVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTW 305
Query: 472 EPSNSGY 478
+GY
Sbjct: 306 TTMITGY 312
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 268 bits (685), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 247/464 (53%), Gaps = 24/464 (5%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ + + ++L C + L + M +G + + + C L + + V
Sbjct: 257 PDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKV 316
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEV 192
HG+V K GF+ ++ + L+ Y G DA +F ++ + +W ++I++ V G++
Sbjct: 317 HGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKL 376
Query: 193 DSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
D A LF E+ E N N++ +V++WT+++ +
Sbjct: 377 DEALSLFSELEEMNHVC------------NVKA-----------NVVTWTSVIKGCNVQG 413
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
R D + F +M + + V + ++S CA L AL LG+E+H +++ ++ + +
Sbjct: 414 RGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQN 473
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRP 372
+L++MYAKCG + LVF ++ K+L WNS+I G HG+A++AL MF M G P
Sbjct: 474 ALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHP 533
Query: 373 NGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM 432
+G+ V+VL+AC+HAG VE+GR F SM + + + P EHY C+VDLL + G +++A E+
Sbjct: 534 DGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEI 593
Query: 433 IRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRW 492
++ M EP + GALL+ C++H+N++IA L +LEP +G Y LL N+Y+ RW
Sbjct: 594 VKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRW 653
Query: 493 KEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSY 536
+E + +R K K GSSW+E+ +K + F++ + +
Sbjct: 654 EESANVRALAKKK-DLKKVSGSSWIEVKKKKYKFSSGSIVQSEF 696
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 147/328 (44%), Gaps = 31/328 (9%)
Query: 77 VYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHV 136
++N++L+ V AL Y M + G+ Y +++AC L + H V
Sbjct: 125 LWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQV 184
Query: 137 WKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAA 196
+ G ++ V L+ Y G GDA +F EMP R+ +W MI + + +SA
Sbjct: 185 IQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAV 244
Query: 197 RLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGD 256
++F+ M D ++WT++++C+S+ +F D
Sbjct: 245 KIFEWMQREEFKP---------------------------DEVTWTSVLSCHSQCGKFED 277
Query: 257 VVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLID 316
V+ FH M G A A+ S CA L AL + ++VH Y++ GF + ++LI
Sbjct: 278 VLKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIH 337
Query: 317 MYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK----GIRP 372
+Y K G + + +F +++ K + WNS+I G EAL +FSE+E ++
Sbjct: 338 VYGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKA 397
Query: 373 NGVTFVSVLTACTHAGFVEEGRSRFVSM 400
N VT+ SV+ C G ++ F M
Sbjct: 398 NVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 103/208 (49%), Gaps = 4/208 (1%)
Query: 188 RCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPC---KDVISWTTL 244
+C +V + L D + S N +I YA+ G + A +F + D+ W ++
Sbjct: 71 QCRQVHAQVLLSDFIFRSGSLAAN-LISVYARLGLLLDARNVFETVSLVLLSDLRLWNSI 129
Query: 245 MTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGF 304
+ + + + + L+ M RGL D + ++ AC +LG GL + H ++ G
Sbjct: 130 LKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGL 189
Query: 305 GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSE 364
++++ + L+ +Y K G + + +F ++ V+N WN MI G + + A+K+F
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 365 MERKGIRPNGVTFVSVLTACTHAGFVEE 392
M+R+ +P+ VT+ SVL+ + G E+
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFED 277
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 275/534 (51%), Gaps = 86/534 (16%)
Query: 21 KRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTI-NLATH------AFSHMDNP 73
+RC+ K ++S ++ I +++++ +++ + A + NL H F ++ P
Sbjct: 19 QRCNT--VKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIP 76
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRN---GVVPTSYSFSSLVKACTLLMDSAAGK 130
N+ VY+ ++R C + H L ++ M++ + P+ +F L+ AC + GK
Sbjct: 77 NSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGK 136
Query: 131 TVHGHVWKRGF---DAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHV 187
+H V K G D H VQT +L + + + +FD
Sbjct: 137 QIHCWVVKNGVFLSDGH--VQT------GVLRIYVEDKLLFD------------------ 170
Query: 188 RCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTC 247
A ++FDE+P+ DV+ W LM
Sbjct: 171 -------ARKVFDEIPQ-------------------------------PDVVKWDVLMNG 192
Query: 248 YSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGF-GL 306
Y R + + +F EM+ RG+ PDE ++TT ++ACA +GAL GK +H ++ +
Sbjct: 193 YVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIES 252
Query: 307 DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEME 366
DV++G++L+DMYAKCG I+ ++ VF KL +N+F W ++I G A +GYAK+A +E
Sbjct: 253 DVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIE 312
Query: 367 RK-GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGL 425
R+ GI+P+ V + VL AC H GF+EEGR+ +M Y I+P EHY C+VDL+ + G
Sbjct: 313 REDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGR 372
Query: 426 IEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSN----SGYYSL 481
++DAL++I M +P + +WGALL+GC+ H+N+E+ +AVQNL+ LE N
Sbjct: 373 LDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQ 432
Query: 482 LVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTS 535
L N+Y V R E K+R ++ G+ KT PG S +E++ + F + D H +
Sbjct: 433 LSNIYFSVQRNPEAFKVRGMIEQRGIRKT-PGWSLLEVDGIVTKFVSGDVSHPN 485
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 132/286 (46%), Gaps = 13/286 (4%)
Query: 178 AWTTMISAHVRCG---EVDSAARLFD-EMPERNSATWNAMIDGYAKSGNIE----CAEIL 229
+W ++I A RC ++ S LF RN+ + ++ + N+ A +
Sbjct: 10 SWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSI 69
Query: 230 FNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV---SRGLAPDEVAMTTVISACAHL 286
F+ + + + T++ SR+ + + F MV + P + +I AC
Sbjct: 70 FDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKA 129
Query: 287 GALGLGKEVHHYLMVNGFGL-DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSM 345
+GK++H +++ NG L D ++ + ++ +Y + + + VF ++ ++ W+ +
Sbjct: 130 CFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVL 189
Query: 346 IDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYC 405
++G G E L++F EM +GI P+ + + LTAC G + +G+ + +
Sbjct: 190 MNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRW 249
Query: 406 ISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
I + +VD+ +K G IE A+E+ +T N F W AL+ G
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFEKLT-RRNVFSWAALIGG 294
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 266 bits (680), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 160/511 (31%), Positives = 259/511 (50%), Gaps = 53/511 (10%)
Query: 47 SFLMNQFIAACTTINLATHAFSHMD--NPNALVYNALL------RTCVHCHRSHQALACY 98
S L N +I + ++ AT +F+ + N +N +L +TC + L Y
Sbjct: 43 SSLTNAYIQS-NRLDFATSSFNRIPCWKRNRHSWNTILSGYSKSKTCCY----SDVLLLY 97
Query: 99 VKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSML 158
+M R+ S++ +KAC L G +HG K G D +V +LVE Y+ L
Sbjct: 98 NRMRRHCDGVDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQL 157
Query: 159 GLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSAT--------- 209
G A+KVFDE+P R++ W ++ +++ + RLF M + A
Sbjct: 158 GTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLV 217
Query: 210 -------------------------------WNAMIDGYAKSGNIECAEILFNRMPCKDV 238
++ID Y K ++ A LF ++V
Sbjct: 218 KACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNV 277
Query: 239 ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHY 298
+ WTTL++ +++ +R + LF +M+ + P++ + ++ +C+ LG+L GK VH Y
Sbjct: 278 VMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGY 337
Query: 299 LMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEA 358
++ NG +D +S IDMYA+CG+I + VF + +N+ W+SMI+ +G +EA
Sbjct: 338 MIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEA 397
Query: 359 LKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVD 418
L F +M+ + + PN VTFVS+L+AC+H+G V+EG +F SM DY + P EHY CMVD
Sbjct: 398 LDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVD 457
Query: 419 LLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGY 478
LL + G I +A I M +P + WGALLS C++H+ +++A + L+ +EP S
Sbjct: 458 LLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSV 517
Query: 479 YSLLVNMYAEVNRWKEVSKIRIAMKDLGVEK 509
Y LL N+YA+ W+ V+ +R M G K
Sbjct: 518 YVLLSNIYADAGMWEMVNCVRRKMGIKGYRK 548
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 157/359 (43%), Gaps = 45/359 (12%)
Query: 39 IKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQAL 95
+K ++D ++ + A T+ A F + N++++ L++ + + +
Sbjct: 136 MKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVF 195
Query: 96 ACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGF-DAHVFVQTTLVEF 154
+ M G+ + + LVKAC + GK VHG +R F D ++Q ++++
Sbjct: 196 RLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDM 255
Query: 155 YSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------P----- 203
Y L +ARK+F+ +R+ WTT+IS +C A LF +M P
Sbjct: 256 YVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTL 315
Query: 204 ----------------------------ERNSATWNAMIDGYAKSGNIECAEILFNRMPC 235
E ++ + + ID YA+ GNI+ A +F+ MP
Sbjct: 316 AAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPE 375
Query: 236 KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLG-KE 294
++VISW++++ + N F + + FH+M S+ + P+ V +++SAC+H G + G K+
Sbjct: 376 RNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQ 435
Query: 295 VHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLF-CWNSMIDGLATH 352
G + + ++D+ + G I + + VK + W +++ H
Sbjct: 436 FESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIH 494
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 85/185 (45%), Gaps = 17/185 (9%)
Query: 275 AMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL 334
A+ T++S L ++VH ++++GF +V +GSSL + Y + +D + F ++
Sbjct: 9 ALLTILSQAKTLNHT---QQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRI 65
Query: 335 QV--KNLFCWNSMIDGLATHGYA--KEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
+N WN+++ G + + L +++ M R + V + AC G +
Sbjct: 66 PCWKRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLL 125
Query: 391 EEGRSRFVSMIEDYCISPGIEH----YGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWG 446
E G +I + G++ +V++ ++ G +E A ++ + NS +WG
Sbjct: 126 ENG-----ILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR-NSVLWG 179
Query: 447 ALLSG 451
L+ G
Sbjct: 180 VLMKG 184
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 156/508 (30%), Positives = 256/508 (50%), Gaps = 42/508 (8%)
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGV--VPTSYSFSSLVKACTLLM 124
F++M N ++ ++ R +A+ + LR + Y F++++ + +
Sbjct: 176 FAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATI 235
Query: 125 DSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMIS 184
G+ +H K G V + LV YS +A K+FD +R++ W+ M++
Sbjct: 236 YVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT 295
Query: 185 AHVRCGEVDSAARLFDEM------P---------------------------------ER 205
+ + GE A +LF M P ER
Sbjct: 296 GYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFER 355
Query: 206 NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
+ A++D YAK+G + A F+ + +DV WT+L++ Y +N + + L+ M
Sbjct: 356 HLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMK 415
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
+ G+ P++ M +V+ AC+ L L LGK+VH + + +GFGL+V IGS+L MY+KCGS++
Sbjct: 416 TAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLE 475
Query: 326 RSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACT 385
LVF + K++ WN+MI GL+ +G EAL++F EM +G+ P+ VTFV++++AC+
Sbjct: 476 DGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACS 535
Query: 386 HAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIW 445
H GFVE G F M + + P ++HY CMVDLLS+ G +++A E I + +W
Sbjct: 536 HKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLW 595
Query: 446 GALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDL 505
LLS CK H E+ A + LM L S Y L +Y + R ++V ++ M+
Sbjct: 596 RILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRAN 655
Query: 506 GVEKTCPGSSWVEINQKIHLFAASDNYH 533
GV K G SW+E+ + H+F D H
Sbjct: 656 GVSKEV-GCSWIELKNQYHVFVVGDTMH 682
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 163/360 (45%), Gaps = 49/360 (13%)
Query: 55 AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFS 114
+ C ++N A F + N++ ++A++ S +A+ + +M G+ P+ Y+
Sbjct: 267 SKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIV 326
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
++ AC+ + GK +H + K GF+ H+F T LV+ Y+ G DARK FD + ER
Sbjct: 327 GVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQER 386
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDG-------------- 216
D WT++IS +V+ + + A L+ M N T +++
Sbjct: 387 DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVH 446
Query: 217 ---------------------YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFG 255
Y+K G++E ++F R P KDV+SW +++ S N +
Sbjct: 447 GHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGD 506
Query: 256 DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG--SS 313
+ + LF EM++ G+ PD+V +ISAC+H G + G + +M + GLD + +
Sbjct: 507 EALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGW-FYFNMMSDQIGLDPKVDHYAC 565
Query: 314 LIDMYAKCGSIDRSLLVFYKLQVKNLFC-WNSMIDGLATHG------YAKEALKMFSEME 366
++D+ ++ G + + + + C W ++ HG YA E L E
Sbjct: 566 MVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRE 625
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 193/429 (44%), Gaps = 76/429 (17%)
Query: 33 SVYANMIKTNAN---QDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVH-- 87
+V+ +I+T A+ Q + ++ F A C + A F+ + + + +N+L+
Sbjct: 35 AVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNG 94
Query: 88 -CHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVF 146
S+ + + +M ++P +Y+ + + KA + L S G+ H V K ++
Sbjct: 95 GISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDIY 154
Query: 147 VQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERN 206
V T+LV Y GL V+ ++F MPERN
Sbjct: 155 VDTSLVGMYCKAGL-------------------------------VEDGLKVFAYMPERN 183
Query: 207 SATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVS 266
+ TW+ M+ GYA G +E A +FN + R K G
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFN---------------LFLREKEEG----------- 217
Query: 267 RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDR 326
+ + T V+S+ A +GLG+++H + NG V + ++L+ MY+KC S++
Sbjct: 218 ---SDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNE 274
Query: 327 SLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
+ +F +N W++M+ G + +G + EA+K+FS M GI+P+ T V VL AC+
Sbjct: 275 ACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSD 334
Query: 387 AGFVEEGRSRFVSMIEDYCISPGIEHY----GCMVDLLSKGGLIEDALEMIRGMTFEPNS 442
++EEG+ + + + G E + +VD+ +K G + DA + + E +
Sbjct: 335 ICYLEEGKQ-----LHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ-ERDV 388
Query: 443 FIWGALLSG 451
+W +L+SG
Sbjct: 389 ALWTSLISG 397
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
G+ VH ++ G + + L++ YAKCG + ++ +F + K++ WNS+I G +
Sbjct: 33 GRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQ 92
Query: 352 HGYAKEA---LKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISP 408
+G + +++F EM + I PN T + A + GR +++
Sbjct: 93 NGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGD 152
Query: 409 GIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNL 468
I +V + K GL+ED L++ M E N++ W ++SG +E A + V NL
Sbjct: 153 -IYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEA-IKVFNL 209
Query: 469 MILEP---SNSGYY------SLLVNMYAEVNR 491
+ E S+S Y SL +Y + R
Sbjct: 210 FLREKEEGSDSDYVFTAVLSSLAATIYVGLGR 241
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 265 bits (677), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 155/512 (30%), Positives = 261/512 (50%), Gaps = 47/512 (9%)
Query: 52 QFIAACTTINLATHAFSHMDNPNALVYNALLRT-CVHCHRSHQALACYVKMLR-NGVVPT 109
F A C + +A F M + + +NA++ +HC + + ++ M R +G+ P
Sbjct: 146 DFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLT-DVIGLFLDMRRIDGLSPN 204
Query: 110 SYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFD 169
+ + A GK VHG+ + GF + V+T +++ Y+ AR+VFD
Sbjct: 205 LSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFD 264
Query: 170 EMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNS---------------------- 207
+++ W+ MI +V + A +F +M ++
Sbjct: 265 LDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCARFGDL 324
Query: 208 -------------------ATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCY 248
N +I YAK G++ A F+ + KDVIS+ +L+T
Sbjct: 325 SGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGC 384
Query: 249 SRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDV 308
N R + LFHEM + G+ PD + V++AC+HL ALG G H Y +V+G+ ++
Sbjct: 385 VVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNT 444
Query: 309 YIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
I ++L+DMY KCG +D + VF + +++ WN+M+ G HG KEAL +F+ M+
Sbjct: 445 SICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQET 504
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE-DYCISPGIEHYGCMVDLLSKGGLIE 427
G+ P+ VT +++L+AC+H+G V+EG+ F SM D+ + P I+HY CM DLL++ G ++
Sbjct: 505 GVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLD 564
Query: 428 DALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYA 487
+A + + M FEP+ + G LLS C ++N E+ N + + L + LL N Y+
Sbjct: 565 EAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESLV-LLSNTYS 623
Query: 488 EVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEI 519
RW++ ++IR+ K G+ KT PG SWV++
Sbjct: 624 AAERWEDAARIRMIQKKRGLLKT-PGYSWVDV 654
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 130/456 (28%), Positives = 215/456 (47%), Gaps = 58/456 (12%)
Query: 50 MNQFIAACTTINLATHAFSHMDNP--NALVYNALLRTCVHCHRSHQALACYVKMLRNGVV 107
+ + A+C + LA H F + +P N + ++ ++R + +AL Y KML +GV
Sbjct: 41 LTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVR 100
Query: 108 PTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKV 167
PT Y++ ++KAC L GK +H HV F ++V T LV+FY+ G A KV
Sbjct: 101 PTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKV 160
Query: 168 FDEMPERDAFAWTTMISA-HVRCGEVDSAARLFDEMPERNSATWN--------------- 211
FDEMP+RD AW MIS + C D LF +M + + N
Sbjct: 161 FDEMPKRDMVAWNAMISGFSLHCCLTDVIG-LFLDMRRIDGLSPNLSTIVGMFPALGRAG 219
Query: 212 -------------------------AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMT 246
++D YAKS I A +F+ K+ ++W+ ++
Sbjct: 220 ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIG 279
Query: 247 CYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTT------VISACAHLGALGLGKEVHHYLM 300
Y N+ + +F +M L D VAM T ++ CA G L G+ VH Y +
Sbjct: 280 GYVENEMIKEAGEVFFQM----LVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAV 335
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALK 360
GF LD+ + +++I YAK GS+ + F ++ +K++ +NS+I G + +E+ +
Sbjct: 336 KAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFR 395
Query: 361 MFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS-RFVSMIEDYCISPGIEHYGCMVDL 419
+F EM GIRP+ T + VLTAC+H + G S ++ Y ++ I + ++D+
Sbjct: 396 LFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDM 453
Query: 420 LSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
+K G ++ A + M + + W +L G +H
Sbjct: 454 YTKCGKLDVAKRVFDTM-HKRDIVSWNTMLFGFGIH 488
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 139/279 (49%), Gaps = 34/279 (12%)
Query: 217 YAKSGNIECAEILFNRMPCKDV--ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEV 274
YA +E A +F+ +P + I+W ++ Y+ N + L+++M++ G+ P +
Sbjct: 45 YASCNEVELARHVFDEIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKY 104
Query: 275 AMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL 334
V+ ACA L A+ GK +H ++ + F D+Y+ ++L+D YAKCG ++ ++ VF ++
Sbjct: 105 TYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEM 164
Query: 335 QVKNLFCWNSMIDGLATHGYAKEALKMFSEMER-KGIRPNGVTFVSVLTACTHAGFVEEG 393
+++ WN+MI G + H + + +F +M R G+ PN T V + A AG + EG
Sbjct: 165 PKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Query: 394 RSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALE--------MIRGMTFEPNSFIW 445
++ + YC G + DL+ K G+++ + + + F+ N W
Sbjct: 225 KA-----VHGYCTRMGFSN-----DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTW 274
Query: 446 GALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVN 484
A++ G V+N MI E + ++ +LVN
Sbjct: 275 SAMIGG------------YVENEMIKE-AGEVFFQMLVN 300
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 153/357 (42%), Gaps = 51/357 (14%)
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFD-AHVFVQTTLVEFYSMLGLAGDARKVFDEM 171
F SL++ C + G+ +H H+ KR + V L Y+ AR VFDE+
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEI 61
Query: 172 PER--DAFAWTTMISAHVRCGEVDSAARLFDEM------PERNSATW------------- 210
P + AW MI A+ + A L+ +M P + + +
Sbjct: 62 PHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDD 121
Query: 211 --------------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSR 250
A++D YAK G +E A +F+ MP +D+++W +++ +S
Sbjct: 122 GKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSL 181
Query: 251 NKRFGDVVTLFHEMVS-RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVY 309
+ DV+ LF +M GL+P+ + + A GAL GK VH Y GF D+
Sbjct: 182 HCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLV 241
Query: 310 IGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG 369
+ + ++D+YAK I + VF KN W++MI G + KEA ++F +M
Sbjct: 242 VKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQM---- 297
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLI 426
+ + V V+ + G + G +RF + C+ G ++DL + +I
Sbjct: 298 LVNDNVAMVTPVA----IGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTII 350
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 156/537 (29%), Positives = 262/537 (48%), Gaps = 67/537 (12%)
Query: 30 TLESVYANMIKTNANQDSFLMNQFIAA---CTTINLATHAFSHMDNPNALVYNALLRTCV 86
+L+ ++ +K + + N F+A+ C +++ A F + + +NAL+
Sbjct: 413 SLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHA 472
Query: 87 HCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVF 146
+ +L +++M +G++P S++ SL+ AC+ L GK VHG + +
Sbjct: 473 QSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWL----- 527
Query: 147 VQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERN 206
ERD F + +++S ++ CGE+ + LFD M +
Sbjct: 528 --------------------------ERDLFVYLSVLSLYIHCGELCTVQALFDAMED-- 559
Query: 207 SATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVS 266
K ++SW T++T Y +N + +F +MV
Sbjct: 560 -----------------------------KSLVSWNTVITGYLQNGFPDRALGVFRQMVL 590
Query: 267 RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDR 326
G+ ++M V AC+ L +L LG+E H Y + + D +I SLIDMYAK GSI +
Sbjct: 591 YGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQ 650
Query: 327 SLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
S VF L+ K+ WN+MI G HG AKEA+K+F EM+R G P+ +TF+ VLTAC H
Sbjct: 651 SSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNH 710
Query: 387 AGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMI-RGMTFEPNSFIW 445
+G + EG M + + P ++HY C++D+L + G ++ AL ++ M+ E + IW
Sbjct: 711 SGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIW 770
Query: 446 GALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDL 505
+LLS C++H+NLE+ L LEP Y LL N+YA + +W++V K+R M ++
Sbjct: 771 KSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEM 830
Query: 506 GVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELGSI 562
+ K G SW+E+N+K+ F + + + + GY P+ S+
Sbjct: 831 SLRKDA-GCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSV 886
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 178/403 (44%), Gaps = 49/403 (12%)
Query: 41 TNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALAC 97
T D L + I A C + + + F + + N +NA++ + + L
Sbjct: 114 TRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLET 173
Query: 98 YVKMLRN-GVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYS 156
+++M+ ++P +++ ++KAC + D G VHG V K G VFV LV FY
Sbjct: 174 FIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYG 233
Query: 157 MLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNS--------A 208
G DA ++FD MPER+ +W +MI G + + L EM E N A
Sbjct: 234 THGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVA 293
Query: 209 T----------------------W-------------NAMIDGYAKSGNIECAEILFNRM 233
T W NA++D Y+K G I A+++F
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRG--LAPDEVAMTTVISACAHLGALGL 291
K+V+SW T++ +S + +M++ G + DEV + + C H L
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
KE+H Y + F + + ++ + YAKCGS+ + VF+ ++ K + WN++I G A
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGR 394
+ +L +M+ G+ P+ T S+L+AC+ + G+
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/476 (22%), Positives = 206/476 (43%), Gaps = 60/476 (12%)
Query: 33 SVYANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDNPNALVYNALLRTCVHCH 89
+V+ ++KT +D F+ N ++ T T A F M N + +N+++R
Sbjct: 208 AVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNG 267
Query: 90 RSHQALACYVKMLR-NG---VVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHV 145
S ++ +M+ NG +P + +++ C + GK VHG K D +
Sbjct: 268 FSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKEL 327
Query: 146 FVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM--- 202
+ L++ YS G +A+ +F ++ +W TM+ G+ + +M
Sbjct: 328 VLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAG 387
Query: 203 ------------------------PE--------------RNSATWNAMIDGYAKSGNIE 224
P N NA + YAK G++
Sbjct: 388 GEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLS 447
Query: 225 CAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACA 284
A+ +F+ + K V SW L+ ++++ + +M GL PD + +++SAC+
Sbjct: 448 YAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACS 507
Query: 285 HLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNS 344
L +L LGKEVH +++ N D+++ S++ +Y CG + +F ++ K+L WN+
Sbjct: 508 KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNT 567
Query: 345 MIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS----RFVSM 400
+I G +G+ AL +F +M GI+ G++ + V AC+ + GR +
Sbjct: 568 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL 627
Query: 401 IEDYCISPGIEHYGC-MVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
+ED C ++D+ +K G I + ++ G+ E ++ W A++ G +H
Sbjct: 628 LEDDAF------IACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYGIH 676
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 124/248 (50%), Gaps = 15/248 (6%)
Query: 213 MIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSR-GLAP 271
+I YA G+ + + +F+ + K++ W +++ YSRN+ + +V+ F EM+S L P
Sbjct: 126 IITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLP 185
Query: 272 DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVF 331
D VI ACA + +G+G VH ++ G DV++G++L+ Y G + +L +F
Sbjct: 186 DHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLF 245
Query: 332 YKLQVKNLFCWNSMIDGLATHGYAKEALKMFSE-MERKG---IRPNGVTFVSVLTACTHA 387
+ +NL WNSMI + +G+++E+ + E ME G P+ T V+VL C
Sbjct: 246 DIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCARE 305
Query: 388 GFVEEGRSRFVSMIEDYCISPGIEHY----GCMVDLLSKGGLIEDALEMIRGMTFEPNSF 443
+ G+ + + + ++ ++D+ SK G I +A +MI M N
Sbjct: 306 REIGLGKG-----VHGWAVKLRLDKELVLNNALMDMYSKCGCITNA-QMIFKMNNNKNVV 359
Query: 444 IWGALLSG 451
W ++ G
Sbjct: 360 SWNTMVGG 367
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 18/184 (9%)
Query: 275 AMTTVISACAHLGALGLGKEVHHYLMVNG---FGLDVYIGSSLIDMYAKCGSIDRSLLVF 331
A+ ++ A + +G+++H +V+G D + + +I MYA CGS D S VF
Sbjct: 86 ALGLLLQASGKRKDIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVF 143
Query: 332 YKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM-ERKGIRPNGVTFVSVLTAC-----T 385
L+ KNLF WN++I + + E L+ F EM + P+ T+ V+ AC
Sbjct: 144 DALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 386 HAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIW 445
G G ++ED + +V G + DAL++ M E N W
Sbjct: 204 GIGLAVHGLVVKTGLVEDVFVG------NALVSFYGTHGFVTDALQLFDIMP-ERNLVSW 256
Query: 446 GALL 449
+++
Sbjct: 257 NSMI 260
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 82/184 (44%), Gaps = 4/184 (2%)
Query: 23 CSKREKKTL-ESVYANMIKTNANQDSFLMNQFIAA---CTTINLATHAFSHMDNPNALVY 78
CSK + L + V+ +I+ +D F+ ++ C + F M++ + + +
Sbjct: 506 CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSW 565
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWK 138
N ++ + +AL + +M+ G+ S + AC+LL G+ H + K
Sbjct: 566 NTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK 625
Query: 139 RGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARL 198
+ F+ +L++ Y+ G + KVF+ + E+ +W MI + G A +L
Sbjct: 626 HLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKL 685
Query: 199 FDEM 202
F+EM
Sbjct: 686 FEEM 689
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 265 bits (677), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 159/544 (29%), Positives = 265/544 (48%), Gaps = 46/544 (8%)
Query: 34 VYANMIKTNANQDSFLMNQFIAACTTINL---ATHAFSHMDNPNALVYNALLRTCVHCHR 90
++ ++K+ D + + + NL + F M + +N ++
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 91 SHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTT 150
+ +AL + +M +G P S S + + AC+ L+ GK +H K+GF+ +V +
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 151 LVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------PE 204
LV+ Y AR+VF +MP + AW +MI +V G+ S + + M P
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 205 RNSAT--------------------------WNA-------MIDGYAKSGNIECAEILFN 231
+ + T NA +ID Y K G AE +F+
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 232 RMPCKDVI-SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALG 290
+ KDV SW +++ Y + V ++ +MVS G+ PD V T+V+ AC+ L AL
Sbjct: 369 KTQ-KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALE 427
Query: 291 LGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLA 350
GK++H + + D + S+L+DMY+KCG+ + +F + K++ W MI
Sbjct: 428 KGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYG 487
Query: 351 THGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGI 410
+HG +EAL F EM++ G++P+GVT ++VL+AC HAG ++EG F M Y I P I
Sbjct: 488 SHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPII 547
Query: 411 EHYGCMVDLLSKGGLIEDALEMIRGMT-FEPNSFIWGALLSGCKLHRNLEIANVAVQNLM 469
EHY CM+D+L + G + +A E+I+ N+ + L S C LH + + + L+
Sbjct: 548 EHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLV 607
Query: 470 ILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAAS 529
P ++ Y +L N+YA W ++R+ MK++G+ K PG SW+E++ K+ F A
Sbjct: 608 ENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKK-PGCSWIEMSDKVCHFFAE 666
Query: 530 DNYH 533
D H
Sbjct: 667 DRSH 670
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 165/328 (50%), Gaps = 19/328 (5%)
Query: 80 ALLRTCVHCHRSHQALA-CYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWK 138
+LLR C + +S + + + ++L G+ SL+ D + + HV++
Sbjct: 8 SLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSAR----HVFE 63
Query: 139 RGFD--AHVFVQTTLVEFYSMLGLAGDARKVFDEMPE-----RDAFAWTTMISAHVRCGE 191
FD + V++ +L+ YS + D +VF + D+F + +I A+ G
Sbjct: 64 -NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGR 122
Query: 192 VDSAARLFDEMPERNS-----ATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMT 246
+ R+ + ++ ++++ YAK E + +F+ MP +DV SW T+++
Sbjct: 123 -EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVIS 181
Query: 247 CYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL 306
C+ ++ + LF M S G P+ V++T ISAC+ L L GKE+H + GF L
Sbjct: 182 CFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFEL 241
Query: 307 DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEME 366
D Y+ S+L+DMY KC ++ + VF K+ K+L WNSMI G G +K +++ + M
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 367 RKGIRPNGVTFVSVLTACTHAGFVEEGR 394
+G RP+ T S+L AC+ + + G+
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGK 329
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 165/564 (29%), Positives = 278/564 (49%), Gaps = 52/564 (9%)
Query: 23 CSKREKKTLESVYANMIKTNA-NQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVY 78
C +R L + ++ N +Q FL+N I + C ++ A F D + + +
Sbjct: 158 CGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSW 217
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSA---AGKTVHGH 135
N+L+ V + + L KM R+G+ T+Y+ S++KAC + ++ G +H +
Sbjct: 218 NSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 136 VWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSA 195
K G + + V+T L++ Y+ G +A K+F MP ++ + MIS ++ E+
Sbjct: 278 TAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDE 337
Query: 196 A-----RLFDEMPER----NSATWN----------------------------------- 211
A +LF +M R + +T++
Sbjct: 338 ASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGS 397
Query: 212 AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAP 271
A+I+ YA G+ E F +D+ SWT+++ C+ +N++ LF ++ S + P
Sbjct: 398 ALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRP 457
Query: 272 DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVF 331
+E ++ ++SACA AL G+++ Y + +G + +S I MYAK G++ + VF
Sbjct: 458 EEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVF 517
Query: 332 YKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVE 391
++Q ++ +++MI LA HG A EAL +F M+ GI+PN F+ VL AC H G V
Sbjct: 518 IEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVT 577
Query: 392 EGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
+G F M DY I+P +H+ C+VDLL + G + DA +I F+ + W ALLS
Sbjct: 578 QGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSS 637
Query: 452 CKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTC 511
C+++++ I + LM LEP SG Y LL N+Y + ++R M+D GV+K
Sbjct: 638 CRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKE- 696
Query: 512 PGSSWVEINQKIHLFAASDNYHTS 535
P SW+ I + H FA +D H S
Sbjct: 697 PALSWIVIGNQTHSFAVADLSHPS 720
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 170/404 (42%), Gaps = 52/404 (12%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSL 116
C + A F M N + +N+L+ QA+ +++ + ++++
Sbjct: 95 CRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGA 154
Query: 117 VKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDA 176
+ C D G+ +HG V G VF+ L++ YS G A +FD ERD
Sbjct: 155 LGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQ 214
Query: 177 FAWTTMISAHVRCGEVDSAARLFDEMP--------------------------------- 203
+W ++IS +VR G + L +M
Sbjct: 215 VSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Query: 204 ---------ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRF 254
E + A++D YAK+G+++ A LF+ MP K+V+++ +++ + +
Sbjct: 275 HCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEI 334
Query: 255 GDVVT-----LFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVY 309
D + LF +M RGL P + V+ AC+ L G+++H + N F D +
Sbjct: 335 TDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEF 394
Query: 310 IGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG 369
IGS+LI++YA GS + + F +++ W SMID + + A +F ++
Sbjct: 395 IGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSH 454
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHY 413
IRP T +++AC + G I+ Y I GI+ +
Sbjct: 455 IRPEEYTVSLMMSACADFAALSSGEQ-----IQGYAIKSGIDAF 493
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 149/313 (47%), Gaps = 47/313 (15%)
Query: 129 GKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVR 188
GK HGH+ K + +++ L+ Y G AR++FD MPER+ ++ ++IS + +
Sbjct: 66 GKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQ 125
Query: 189 CGEVDSAARLFDEMPERN----SATW---------------------------------- 210
G + A LF E E N T+
Sbjct: 126 MGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFL 185
Query: 211 -NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGL 269
N +ID Y+K G ++ A LF+R +D +SW +L++ Y R + + L +M GL
Sbjct: 186 INVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGL 245
Query: 270 APDEVAMTTVISACA---HLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDR 326
A+ +V+ AC + G + G +H Y G D+ + ++L+DMYAK GS+
Sbjct: 246 NLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKE 305
Query: 327 SLLVFYKLQVKNLFCWNSMIDGL-----ATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
++ +F + KN+ +N+MI G T + EA K+F +M+R+G+ P+ TF VL
Sbjct: 306 AIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVL 365
Query: 382 TACTHAGFVEEGR 394
AC+ A +E GR
Sbjct: 366 KACSAAKTLEYGR 378
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 156/325 (48%), Gaps = 32/325 (9%)
Query: 217 YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAM 276
Y K + A LF+RMP +++IS+ +L++ Y++ + + LF E L D+
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTY 151
Query: 277 TTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV 336
+ C L LG+ +H ++VNG V++ + LIDMY+KCG +D+++ +F +
Sbjct: 152 AGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDE 211
Query: 337 KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC---THAGFVEEG 393
++ WNS+I G G A+E L + ++M R G+ SVL AC + GF+E+G
Sbjct: 212 RDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKG 271
Query: 394 RSRFVSMIEDYCISPGIEH----YGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALL 449
+ I Y G+E ++D+ +K G +++A+++ M N + A++
Sbjct: 272 MA-----IHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMI 325
Query: 450 SGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEK 509
SG +Q I + ++S + L ++M R E S ++ V K
Sbjct: 326 SG------------FLQMDEITDEASSEAFKLFMDMQ---RRGLEPSPSTFSV----VLK 366
Query: 510 TCPGSSWVEINQKIHLFAASDNYHT 534
C + +E ++IH +N+ +
Sbjct: 367 ACSAAKTLEYGRQIHALICKNNFQS 391
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 24/196 (12%)
Query: 267 RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDR 326
+ A D + A G++ LGK H +++ + +Y+ ++L++MY KC +
Sbjct: 41 KNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGF 100
Query: 327 SLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC-- 384
+ +F ++ +N+ +NS+I G G+ ++A+++F E ++ + T+ L C
Sbjct: 101 ARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGE 160
Query: 385 ---------THAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRG 435
H V G S+ V +I ++D+ SK G ++ A+ +
Sbjct: 161 RCDLDLGELLHGLVVVNGLSQQVFLI------------NVLIDMYSKCGKLDQAMSLFDR 208
Query: 436 MTFEPNSFIWGALLSG 451
E + W +L+SG
Sbjct: 209 CD-ERDQVSWNSLISG 223
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/361 (35%), Positives = 220/361 (60%), Gaps = 14/361 (3%)
Query: 164 ARKVFDEMP--ERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSG 221
AR++F+ MP ++ AW+ M+ +V +++ A + F+++PE+N+ W+ M+ GY + G
Sbjct: 163 ARELFERMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIG 222
Query: 222 NIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVIS 281
++ A +F R+ +D++ W TL+ Y++N D + F M G PD V +++++S
Sbjct: 223 DVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILS 282
Query: 282 ACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFC 341
ACA G L +G+EVH + G L+ ++ ++LIDMYAKCG ++ + VF + V+++ C
Sbjct: 283 ACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVAC 342
Query: 342 WNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMI 401
NSMI LA HG KEAL+MFS ME ++P+ +TF++VLTAC H GF+ EG F M
Sbjct: 343 CNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM- 401
Query: 402 EDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIA 461
+ + P ++H+GC++ LL + G +++A +++ M +PN + GALL CK+H + E+A
Sbjct: 402 KTQDVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMA 461
Query: 462 NVAVQNLMILEPSNS-------GYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGS 514
Q + I+E + S + + + N+YA RW+ +R+ M+ G+EK+ PG
Sbjct: 462 E---QVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKS-PGL 517
Query: 515 S 515
S
Sbjct: 518 S 518
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/362 (19%), Positives = 144/362 (39%), Gaps = 48/362 (13%)
Query: 24 SKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLR 83
+ R+ + + ++ + NA S +M+ + ++ A F + + +++N L+
Sbjct: 189 NNRKMEDARKFFEDIPEKNAFVWSLMMSGYFR-IGDVHEARAIFYRVFARDLVIWNTLIA 247
Query: 84 TCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDA 143
S A+ + M G P + + SS++ AC G+ VH + RG +
Sbjct: 248 GYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIEL 307
Query: 144 HVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP 203
+ FV L++ Y+ G +A VF+ + R +MIS G+ A +F M
Sbjct: 308 NQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTME 367
Query: 204 ----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVIS----WTTLMTCYSRNKRFG 255
+ + T+ A++ G + +F+ M +DV + L+ R+ +
Sbjct: 368 SLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKLK 427
Query: 256 DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLI 315
+ L EM + P++ + ++ AC +VH +D + ++
Sbjct: 428 EAYRLVKEM---HVKPNDTVLGALLGAC----------KVH---------MDTEMAEQVM 465
Query: 316 DMYAKCGSIDRSLLVFYKLQVKNLFC----WNSMIDGLATHGYAKEALKMFSEMERKGIR 371
+ GSI S + + NL+ W + EAL++ EME++G+
Sbjct: 466 KIIETAGSITNSYSENHLASISNLYAHTERWQT-----------AEALRV--EMEKRGLE 512
Query: 372 PN 373
+
Sbjct: 513 KS 514
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 264 bits (675), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 236/438 (53%), Gaps = 36/438 (8%)
Query: 77 VYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHV 136
VYN L+R+ + +LA + ML + V P + +F SL+KA + G +HG
Sbjct: 53 VYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQA 112
Query: 137 WKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAA 196
KRGF FVQT+ V FY G+++S+
Sbjct: 113 LKRGFLWDPFVQTSFVRFYG-------------------------------EVGDLESSR 141
Query: 197 RLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGD 256
++FD++ N+++D ++G ++ A F RMP DV+SWTT++ +S+
Sbjct: 142 KMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAK 201
Query: 257 VVTLFHEMVSRGLA---PDEVAMTTVISACAHL--GALGLGKEVHHYLMVNGFGLDVYIG 311
+ +F EM+ A P+E +V+S+CA+ G + LGK++H Y+M L +G
Sbjct: 202 ALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLG 261
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
++L+DMY K G ++ +L +F +++ K + WN++I LA++G K+AL+MF M+ +
Sbjct: 262 TALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVH 321
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALE 431
PNG+T +++LTAC + V+ G F S+ +Y I P EHYGC+VDL+ + GL+ DA
Sbjct: 322 PNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAAN 381
Query: 432 MIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNR 491
I+ + FEP++ + GALL CK+H N E+ N + L+ L+P + G Y L A +
Sbjct: 382 FIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSN 441
Query: 492 WKEVSKIRIAMKDLGVEK 509
W E K+R AM + G+ K
Sbjct: 442 WSEAEKMRKAMIEAGIRK 459
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 156/540 (28%), Positives = 267/540 (49%), Gaps = 50/540 (9%)
Query: 37 NMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALA 96
N+I +N +L++ + C +A F M N + ++AL+ V +L+
Sbjct: 40 NLITSN-----YLIDMY-CKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLS 93
Query: 97 CYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYS 156
+ +M R G+ P ++FS+ +KAC LL G +HG K GF+ V V +LV+ YS
Sbjct: 94 LFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYS 153
Query: 157 MLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERN---------- 206
G +A KVF + +R +W MI+ V G A F M E N
Sbjct: 154 KCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTL 213
Query: 207 --------------------------------SATWN-AMIDGYAKSGNIECAEILFNRM 233
SAT +++D Y K G + A F+++
Sbjct: 214 TSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQI 273
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK 293
K +ISW++L+ Y++ F + + LF + D A++++I A L GK
Sbjct: 274 KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGK 333
Query: 294 EVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHG 353
++ + GL+ + +S++DMY KCG +D + F ++Q+K++ W +I G HG
Sbjct: 334 QMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHG 393
Query: 354 YAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHY 413
K+++++F EM R I P+ V +++VL+AC+H+G ++EG F ++E + I P +EHY
Sbjct: 394 LGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHY 453
Query: 414 GCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEP 473
C+VDLL + G +++A +I M +PN IW LLS C++H ++E+ + L+ ++
Sbjct: 454 ACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDA 513
Query: 474 SNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYH 533
N Y ++ N+Y + W E R G++K G SWVEI +++H F + ++ H
Sbjct: 514 KNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKE-AGMSWVEIEREVHFFRSGEDSH 572
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/386 (23%), Positives = 171/386 (44%), Gaps = 49/386 (12%)
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
S+++ CT S G VH ++ K G ++ L++ Y A KVFD MPER
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPER 70
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATW-------------------- 210
+ +W+ ++S HV G++ + LF EM + N T+
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 211 ---------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFG 255
N+++D Y+K G I AE +F R+ + +ISW ++ +
Sbjct: 131 GFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGS 190
Query: 256 DVVTLFHEMVSRGLA--PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL--DVYIG 311
+ F M + PDE +T+++ AC+ G + GK++H +L+ +GF I
Sbjct: 191 KALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATIT 250
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
SL+D+Y KCG + + F +++ K + W+S+I G A G EA+ +F ++ +
Sbjct: 251 GSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQ 310
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH--YGCMVDLLSKGGLIEDA 429
+ S++ + +G+ ++ + G+E +VD+ K GL+++A
Sbjct: 311 IDSFALSSIIGVFADFALLRQGKQMQALAVK---LPSGLETSVLNSVVDMYLKCGLVDEA 367
Query: 430 LEMIRGMTFEPNSFIWGALLSGCKLH 455
+ M + + W +++G H
Sbjct: 368 EKCFAEMQLK-DVISWTVVITGYGKH 392
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 276 MTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ 335
+ +++ C G G +VH YL+ +G GL++ + LIDMY KC + VF +
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 336 VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS 395
+N+ W++++ G +G K +L +FSEM R+GI PN TF + L AC +E+G
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 396 RFVSMIEDYCISPGIEHY----GCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
I +C+ G E +VD+ SK G I +A ++ R + + + W A+++G
Sbjct: 129 -----IHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIV-DRSLISWNAMIAG 182
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 263 bits (673), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 158/499 (31%), Positives = 250/499 (50%), Gaps = 42/499 (8%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFIA---ACTTINLATHAFSHMDNPNALVYNALLRTC 85
K + ++A++IKT D + + + C ++ A F + P YN ++
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY 110
Query: 86 VHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKAC-----TLLMDSAAGKTVHGHVWKRG 140
+ + L +M +G Y+ S ++KA T+++ + + VH + K
Sbjct: 111 LKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCD 170
Query: 141 FDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFD 200
E D T ++ +V+ G+++SA +F+
Sbjct: 171 V-------------------------------ELDDVLITALVDTYVKSGKLESARTVFE 199
Query: 201 EMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGD-VVT 259
M + N +MI GY G +E AE +FN KD++ + ++ +SR+ V
Sbjct: 200 TMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVD 259
Query: 260 LFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYA 319
++ M G P+ +VI AC+ L + +G++VH +M +G + +GSSL+DMYA
Sbjct: 260 MYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYA 319
Query: 320 KCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVS 379
KCG I+ + VF ++Q KN+F W SMIDG +G +EAL++F+ M+ I PN VTF+
Sbjct: 320 KCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLG 379
Query: 380 VLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE 439
L+AC+H+G V++G F SM DY + P +EHY C+VDL+ + G + A E R M
Sbjct: 380 ALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPER 439
Query: 440 PNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSN-SGYYSLLVNMYAEVNRWKEVSKI 498
P+S IW ALLS C LH N+E+A++A L L G Y L N+YA ++W VSKI
Sbjct: 440 PDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKI 499
Query: 499 RIAMKDLGVEKTCPGSSWV 517
R MK + KT G SW
Sbjct: 500 REVMKRRRISKTI-GRSWT 517
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 153/492 (31%), Positives = 254/492 (51%), Gaps = 12/492 (2%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
I A F M + + +N ++ V A+ M + + ++L+ A
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSA 384
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAW 179
+ GK V + + F++ + + +T+++ Y+ G DA+KVFD E+D W
Sbjct: 385 AARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILW 444
Query: 180 TTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPC 235
T+++A+ G A RLF M N TWN +I ++G ++ A+ +F +M
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQS 504
Query: 236 K----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
++ISWTT+M +N + + +M GL P+ ++T +SACAHL +L +
Sbjct: 505 SGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHI 564
Query: 292 GKEVHHYLMVN-GFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLA 350
G+ +H Y++ N V I +SL+DMYAKCG I+++ VF L N+MI A
Sbjct: 565 GRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYA 624
Query: 351 THGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGI 410
+G KEA+ ++ +E G++P+ +T +VL+AC HAG + + F ++ + P +
Sbjct: 625 LYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCL 684
Query: 411 EHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMI 470
EHYG MVDLL+ G E AL +I M F+P++ + +L++ C R E+ + + L+
Sbjct: 685 EHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLE 744
Query: 471 LEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEIN--QKIHLFAA 528
EP NSG Y + N YA W EV K+R MK G++K PG SW++I + +H+F A
Sbjct: 745 SEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKK-PGCSWIQITGEEGVHVFVA 803
Query: 529 SDNYHTSYGHVN 540
+D HT +
Sbjct: 804 NDKTHTRINEIQ 815
Score = 219 bits (557), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 155/528 (29%), Positives = 259/528 (49%), Gaps = 60/528 (11%)
Query: 25 KREKKTLESVYANMIKTNANQDSFLMNQFI--------AACTTINLATHAFSHMDNPNAL 76
+R+ T + ++A ++K N D + N++I A C + +A FS + N
Sbjct: 83 ERDLSTGKQIHARILK---NGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVF 139
Query: 77 VYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHV 136
+ A++ AL +V+ML N + P ++ ++ KAC L S G+ VHG+V
Sbjct: 140 SWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYV 199
Query: 137 WKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAA 196
K G + VFV ++L + Y G+ DA KVFDE+P+R+A AW ++ +V+ G+ + A
Sbjct: 200 VKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAI 259
Query: 197 RLFDEMPERN------------SATWN-------------AMIDG--------------Y 217
RLF +M ++ SA+ N A+++G Y
Sbjct: 260 RLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFY 319
Query: 218 AKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMT 277
K G IE AE++F+RM KDV++W +++ Y + D + + M L D V +
Sbjct: 320 CKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLA 379
Query: 278 TVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK 337
T++SA A L LGKEV Y + + F D+ + S+++DMYAKCGSI + VF K
Sbjct: 380 TLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK 439
Query: 338 NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRF 397
+L WN+++ A G + EAL++F M+ +G+ PN +T+ ++ + G V+E + F
Sbjct: 440 DLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMF 499
Query: 398 VSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSGC-- 452
+ M + I P + + M++ + + G E+A+ +R M PN+F LS C
Sbjct: 500 LQM-QSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAH 558
Query: 453 --KLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKI 498
LH I ++NL S + LV+MYA+ + K+
Sbjct: 559 LASLHIGRTIHGYIIRNLQ--HSSLVSIETSLVDMYAKCGDINKAEKV 604
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 179/384 (46%), Gaps = 51/384 (13%)
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRG--FDAHVFVQTTLVEFYSMLGLAGDARKVFDE 170
+ +++ C D + GK +H + K G + + +++T LV FY+ A +F +
Sbjct: 73 YGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSK 132
Query: 171 MPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERN----------------SATW---- 210
+ R+ F+W +I R G + A F EM E + W
Sbjct: 133 LRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFG 192
Query: 211 -------------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRN 251
+++ D Y K G ++ A +F+ +P ++ ++W LM Y +N
Sbjct: 193 RGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQN 252
Query: 252 KRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG 311
+ + + LF +M +G+ P V ++T +SA A++G + GK+ H +VNG LD +G
Sbjct: 253 GKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILG 312
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
+SL++ Y K G I+ + +VF ++ K++ WN +I G G ++A+ M M + ++
Sbjct: 313 TSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLK 372
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH----YGCMVDLLSKGGLIE 427
+ VT ++++A ++ G+ ++ YCI E ++D+ +K G I
Sbjct: 373 YDCVTLATLMSAAARTENLKLGKE-----VQCYCIRHSFESDIVLASTVMDMYAKCGSIV 427
Query: 428 DALEMIRGMTFEPNSFIWGALLSG 451
DA ++ T E + +W LL+
Sbjct: 428 DAKKVFDS-TVEKDLILWNTLLAA 450
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 12/208 (5%)
Query: 250 RNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNG--FGLD 307
+N + ++L EM R L ++ C + L GK++H ++ NG + +
Sbjct: 47 KNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGDFYARN 106
Query: 308 VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMER 367
YI + L+ YAKC +++ + ++F KL+V+N+F W ++I G + AL F EM
Sbjct: 107 EYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLE 166
Query: 368 KGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH----YGCMVDLLSKG 423
I P+ +V AC + SRF + Y + G+E + D+ K
Sbjct: 167 NEIFPDNFVVPNVCKACGALKW-----SRFGRGVHGYVVKSGLEDCVFVASSLADMYGKC 221
Query: 424 GLIEDALEMIRGMTFEPNSFIWGALLSG 451
G+++DA ++ + + N+ W AL+ G
Sbjct: 222 GVLDDASKVFDEIP-DRNAVAWNALMVG 248
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 153/470 (32%), Positives = 245/470 (52%), Gaps = 16/470 (3%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
+ + A++ +H +QAL + KM GVVP + + S V AC+ L G VH
Sbjct: 316 DVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVH 375
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVD 193
K GF V V +LV+ YS G DARKVFD + +D + W +MI+ + + G
Sbjct: 376 SIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCG 435
Query: 194 SAARLFDEMPERNSA----TWNAMIDGYAKSGNIECAEILFNRMP-----CKDVISWTTL 244
A LF M + N TWN MI GY K+G+ A LF RM ++ +W +
Sbjct: 436 KAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLI 495
Query: 245 MTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGF 304
+ Y +N + + + LF +M P+ V + +++ ACA+L + +E+H ++
Sbjct: 496 IAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNL 555
Query: 305 GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSE 364
+ ++L D YAK G I+ S +F ++ K++ WNS+I G HG AL +F++
Sbjct: 556 DAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFNQ 615
Query: 365 MERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGG 424
M+ +GI PN T S++ A G V+EG+ F S+ DY I P +EH MV L +
Sbjct: 616 MKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRAN 675
Query: 425 LIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVN 484
+E+AL+ I+ M + + IW + L+GC++H ++++A A +NL LEP N+ S++
Sbjct: 676 RLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESIVSQ 735
Query: 485 MY---AEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDN 531
+Y A++ R E +K R +D ++K G SW+E+ IH F D
Sbjct: 736 IYALGAKLGRSLEGNKPR---RDNLLKKPL-GQSWIEVRNLIHTFTTGDQ 781
Score = 199 bits (507), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 128/449 (28%), Positives = 217/449 (48%), Gaps = 27/449 (6%)
Query: 55 AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFS 114
A C I A F M N ++A++ +R + + M+++GV+P + F
Sbjct: 126 AKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFP 185
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
+++ C D AGK +H V K G + + V +++ Y+ G A K F M ER
Sbjct: 186 KILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER 245
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPERNSA----TWNAMIDGYAKSGNIECAEILF 230
D AW +++ A+ + G+ + A L EM + + TWN +I GY + G + A L
Sbjct: 246 DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLM 305
Query: 231 NRMP----CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
+M DV +WT +++ N + +F +M G+ P+ V + + +SAC+ L
Sbjct: 306 QKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCL 365
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMI 346
+ G EVH + GF DV +G+SL+DMY+KCG ++ + VF ++ K+++ WNSMI
Sbjct: 366 KVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMI 425
Query: 347 DGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCI 406
G GY +A ++F+ M+ +RPN +T+ ++++ G E F M +D +
Sbjct: 426 TGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKV 485
Query: 407 SPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE---PNSFIWGALLS------------- 450
+ ++ + G ++ALE+ R M F PNS +LL
Sbjct: 486 QRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVRE 545
Query: 451 --GCKLHRNLEIANVAVQNLMILEPSNSG 477
GC L RNL+ + AV+N + + SG
Sbjct: 546 IHGCVLRRNLDAIH-AVKNALTDTYAKSG 573
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 165/349 (47%), Gaps = 46/349 (13%)
Query: 168 FDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAE 227
F E D F T ++S + +CG + A ++FD M ERN TW+AMI
Sbjct: 107 FGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGA----------- 155
Query: 228 ILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLG 287
YSR R+ +V LF M+ G+ PD+ ++ CA+ G
Sbjct: 156 --------------------YSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCG 195
Query: 288 ALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMID 347
+ GK +H ++ G + + +S++ +YAKCG +D + F +++ +++ WNS++
Sbjct: 196 DVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLL 255
Query: 348 GLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCIS 407
+G +EA+++ EME++GI P VT+ ++ G + + +E + I+
Sbjct: 256 AYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMD-LMQKMETFGIT 314
Query: 408 PGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE---PNSFIWGALLSGCK----LHRNLEI 460
+ + M+ L G+ AL+M R M PN+ + +S C +++ E+
Sbjct: 315 ADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEV 374
Query: 461 ANVAVQNLMILE--PSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGV 507
++AV+ I + NS LV+MY++ + ++ K+ ++K+ V
Sbjct: 375 HSIAVKMGFIDDVLVGNS-----LVDMYSKCGKLEDARKVFDSVKNKDV 418
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 149/354 (42%), Gaps = 82/354 (23%)
Query: 142 DAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVR------------- 188
+ VFV+T L+ Y+ G DARKVFD M ER+ F W+ MI A+ R
Sbjct: 112 EPDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRL 171
Query: 189 ----------------------CGEVDSAARLFDEMPERNSATW----NAMIDGYAKSGN 222
CG+V++ + + + ++ N+++ YAK G
Sbjct: 172 MMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 223 IECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA 282
++ A F RM +DVI+W +++ Y +N + + V L EM G++P V +I
Sbjct: 232 LDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGG 291
Query: 283 CAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCW 342
LG ++ + G DV F W
Sbjct: 292 YNQLGKCDAAMDLMQKMETFGITADV-------------------------------FTW 320
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEG---RSRFVS 399
+MI GL +G +AL MF +M G+ PN VT +S ++AC+ + +G S V
Sbjct: 321 TAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVK 380
Query: 400 M--IEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
M I+D + +VD+ SK G +EDA ++ + + + W ++++G
Sbjct: 381 MGFIDDVLVG------NSLVDMYSKCGKLEDARKVFDSVK-NKDVYTWNSMITG 427
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 11/204 (5%)
Query: 250 RNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL--- 306
RN + + +G ++ +C G++ LG+ +H FGL
Sbjct: 58 RNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHAR-----FGLFTE 112
Query: 307 -DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM 365
DV++ + L+ MYAKCG I + VF ++ +NLF W++MI + +E K+F M
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 366 ERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGL 425
+ G+ P+ F +L C + G VE G+ S++ +S + ++ + +K G
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAGKV-IHSVVIKLGMSSCLRVSNSILAVYAKCGE 231
Query: 426 IEDALEMIRGMTFEPNSFIWGALL 449
++ A + R M E + W ++L
Sbjct: 232 LDFATKFFRRMR-ERDVIAWNSVL 254
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 165/534 (30%), Positives = 263/534 (49%), Gaps = 78/534 (14%)
Query: 13 KDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATH-AFS--- 68
K + L +K CS K L ++ + ++ DSF++++ + ++++LA AF+
Sbjct: 13 KHQCLIFLKLCS--SIKHLLQIHGQIHLSSLQNDSFIISELVRV-SSLSLAKDLAFARTL 69
Query: 69 --HMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDS 126
H + +N L R +++ Y +M R G+ P +F L+KAC +
Sbjct: 70 LLHSSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGL 129
Query: 127 AAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAH 186
AG+ + V K GFD V+V L+ Y DARKV
Sbjct: 130 TAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKV------------------- 170
Query: 187 VRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMT 246
FDEM ERN V+SW ++MT
Sbjct: 171 ------------FDEMTERN-------------------------------VVSWNSIMT 187
Query: 247 CYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL 306
N + V F EM+ + PDE M ++SAC G L LGK VH +MV L
Sbjct: 188 ALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRELEL 245
Query: 307 DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEME 366
+ +G++L+DMYAK G ++ + LVF ++ KN++ W++MI GLA +G+A+EAL++FS+M
Sbjct: 246 NCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMM 305
Query: 367 RKG-IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGL 425
++ +RPN VTF+ VL AC+H G V++G F M + + I P + HYG MVD+L + G
Sbjct: 306 KESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGR 365
Query: 426 IEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLE---IANVAVQNLMILEPSNSGYYSLL 482
+ +A + I+ M FEP++ +W LLS C +H + + I + L+ LEP SG ++
Sbjct: 366 LNEAYDFIKKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIV 425
Query: 483 VNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSY 536
N +AE W E +++R MK+ ++K G S +E+ H F + + + Y
Sbjct: 426 ANRFAEARMWAEAAEVRRVMKETKMKKI-AGESCLELGGSFHRFFSGYDPRSEY 478
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 158/501 (31%), Positives = 245/501 (48%), Gaps = 62/501 (12%)
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFD---AHVFVQTTLVEFYSMLGLAGDARKVFDEM 171
SL + C+ D + K +H + + A +F+ +++ S A +VFD +
Sbjct: 53 SLAETCS---DMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSI 109
Query: 172 PERDAFAWTTMISAHVR-CGEVDSAARLFDEMPERNSATW-------------------- 210
+F W T+I A + A L+ +M ER ++
Sbjct: 110 ENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSE 169
Query: 211 --------------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSR 250
N +I Y G ++ A +F+ MP + ++SW +++ R
Sbjct: 170 GKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVR 229
Query: 251 NKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVN---GFGLD 307
+ + LF EM R PD M +V+SACA LG+L LG H +L+ +D
Sbjct: 230 FGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMD 288
Query: 308 VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM-- 365
V + +SLI+MY KCGS+ + VF +Q ++L WN+MI G ATHG A+EA+ F M
Sbjct: 289 VLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVD 348
Query: 366 ERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGL 425
+R+ +RPN VTFV +L AC H GFV +GR F M+ DYCI P +EHYGC+VDL+++ G
Sbjct: 349 KRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGY 408
Query: 426 IEDALEMIRGMTFEPNSFIWGALLSG-CKLHRNLEIANVAVQNLMILEPSN-------SG 477
I +A++M+ M +P++ IW +LL CK ++E++ +N++ + N SG
Sbjct: 409 ITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSG 468
Query: 478 YYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYG 537
Y LL +YA +RW +V +R M + G+ K PG S +EIN H F A D H
Sbjct: 469 AYVLLSRVYASASRWNDVGIVRKLMSEHGIRKE-PGCSSIEINGISHEFFAGDTSHPQTK 527
Query: 538 HVNXXXXXXXXXXXXAGYVPE 558
+ GY+P+
Sbjct: 528 QIYQQLKVIDDRLRSIGYLPD 548
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/354 (27%), Positives = 166/354 (46%), Gaps = 49/354 (13%)
Query: 52 QFIAACTTINLATHAFSHMDNPNALVYNALLRTCVH-CHRSHQALACYVKMLRNG-VVPT 109
Q ++ + +N A F ++N ++ ++N L+R C H R +A Y KML G P
Sbjct: 91 QLSSSFSDVNYAFRVFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPD 150
Query: 110 SYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFD 169
++F ++KAC + + GK VH + K GF V+V L+ Y G ARKVFD
Sbjct: 151 KHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFD 210
Query: 170 EMPERDAFAWTTMISAHVRCGEVDSAARLFDEM-----PERNS----------------A 208
EMPER +W +MI A VR GE DSA +LF EM P+ +
Sbjct: 211 EMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLG 270
Query: 209 TW--------------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCY 248
TW N++I+ Y K G++ AE +F M +D+ SW ++ +
Sbjct: 271 TWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGF 330
Query: 249 SRNKRFGDVVTLFHEMVSR--GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL 306
+ + R + + F MV + + P+ V ++ AC H G + G++ + +MV + +
Sbjct: 331 ATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQ-YFDMMVRDYCI 389
Query: 307 DVYIG--SSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATHGYAKE 357
+ + ++D+ A+ G I ++ + + +K + W S++D G + E
Sbjct: 390 EPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVE 443
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 114/280 (40%), Gaps = 18/280 (6%)
Query: 32 ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
+ V+ ++K D ++ N I +C ++LA F M + + +N+++ V
Sbjct: 171 KQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRF 230
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKR---GFDAHV 145
AL + +M R+ P Y+ S++ AC L + G H + ++ V
Sbjct: 231 GEYDSALQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDV 289
Query: 146 FVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER 205
V+ +L+E Y G A +VF M +RD +W MI G + A FD M ++
Sbjct: 290 LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDK 349
Query: 206 ------NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLM---TCYSRNKRFGD 256
NS T+ ++ G + F+ M +D L R G
Sbjct: 350 RENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMM-VRDYCIEPALEHYGCIVDLIARAGY 408
Query: 257 VVTLFHEMVSRGLAPDEVAMTTVISACAHLGA-LGLGKEV 295
+ ++S + PD V +++ AC GA + L +E+
Sbjct: 409 ITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEI 448
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/352 (35%), Positives = 206/352 (58%), Gaps = 9/352 (2%)
Query: 212 AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAP 271
A++ Y+K G++E A +F+RMP K +++W +L++ + +N + + +F++M G P
Sbjct: 147 ALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEP 206
Query: 272 DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVF 331
D +++SACA GA+ LG VH Y++ G L+V +G++LI++Y++CG + ++ VF
Sbjct: 207 DSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVF 266
Query: 332 YKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK-GIRPNGVTFVSVLTACTHAGFV 390
K++ N+ W +MI THGY ++A+++F++ME G PN VTFV+VL+AC HAG V
Sbjct: 267 DKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLV 326
Query: 391 EEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIR-----GMTFEPNSFIW 445
EEGRS + M + Y + PG+EH+ CMVD+L + G +++A + I G P +W
Sbjct: 327 EEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPA--LW 384
Query: 446 GALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDL 505
A+L CK+HRN ++ + L+ LEP N G++ +L N+YA + EVS IR M
Sbjct: 385 TAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRN 444
Query: 506 GVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVP 557
+ K G S +E+ K ++F+ D H G + GY P
Sbjct: 445 NLRKQV-GYSVIEVENKTYMFSMGDESHQETGEIYRYLETLISRCKEIGYAP 495
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/387 (26%), Positives = 179/387 (46%), Gaps = 57/387 (14%)
Query: 18 DQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIA-ACTTINLA-THA-FSHMDNPN 74
+ I R R K+ L+ V+A++I T + L+ + I AC+ +A TH F + P+
Sbjct: 13 EAIVRAGPRVKQ-LQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPD 71
Query: 75 ALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHG 134
++N+++++ +A Y +ML + V P++Y+F+S++K+C L GK VH
Sbjct: 72 DFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHC 131
Query: 135 HVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDS 194
H GF +VQ LV FYS G AR+VFD MPE+ AW +++S + G D
Sbjct: 132 HAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADE 191
Query: 195 AARLFDEMPER----NSATW-----------------------------------NAMID 215
A ++F +M E +SAT+ A+I+
Sbjct: 192 AIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALIN 251
Query: 216 GYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSR-GLAPDEV 274
Y++ G++ A +F++M +V +WT +++ Y + V LF++M G P+ V
Sbjct: 252 LYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNV 311
Query: 275 AMTTVISACAHLGALGLGKEVHH-----YLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLL 329
V+SACAH G + G+ V+ Y ++ G V ++DM + G +D +
Sbjct: 312 TFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHV----CMVDMLGRAGFLDEAYK 367
Query: 330 VFYKLQVKNLFC----WNSMIDGLATH 352
++L W +M+ H
Sbjct: 368 FIHQLDATGKATAPALWTAMLGACKMH 394
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 128/237 (54%), Gaps = 10/237 (4%)
Query: 223 IECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA 282
I +LF +P D + +++ S+ + V + M+S ++P T+VI +
Sbjct: 57 IAYTHLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKS 116
Query: 283 CAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCW 342
CA L AL +GK VH + +V+GFGLD Y+ ++L+ Y+KCG ++ + VF ++ K++ W
Sbjct: 117 CADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAW 176
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
NS++ G +G A EA+++F +M G P+ TFVS+L+AC G V G S +
Sbjct: 177 NSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLG-----SWVH 231
Query: 403 DYCISPGIE---HYG-CMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
Y IS G++ G +++L S+ G + A E+ M E N W A++S H
Sbjct: 232 QYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK-ETNVAAWTAMISAYGTH 287
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 119/277 (42%), Gaps = 23/277 (8%)
Query: 53 FIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYS 112
F + C + A F M + + +N+L+ + +A+ + +M +G P S +
Sbjct: 151 FYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSAT 210
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP 172
F SL+ AC + G VH ++ G D +V + T L+ YS G G AR+VFD+M
Sbjct: 211 FVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMK 270
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFDEM-----PERNSATWNAMIDGYAKSGNIECAE 227
E + AWT MISA+ G A LF++M P N+ T+ A++ A +G +E
Sbjct: 271 ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEGR 330
Query: 228 ILFNRMP-----CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA 282
++ RM V ++ R + H++ + G A T ++ A
Sbjct: 331 SVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLGA 390
Query: 283 CAHLGALGLGKEV-------------HHYLMVNGFGL 306
C LG E+ HH ++ N + L
Sbjct: 391 CKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYAL 427
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 100/220 (45%), Gaps = 15/220 (6%)
Query: 269 LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSL 328
+A + A ++ A + L ++VH +L+V G+G + + LI + +I +
Sbjct: 5 VAANSAAYEAIVRAGPRVKQL---QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTH 61
Query: 329 LVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAG 388
L+F + + + F +NS+I + + + M + P+ TF SV+ +C
Sbjct: 62 LLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLS 121
Query: 389 FVEEGRSRFV-SMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGA 447
+ G+ +++ + + ++ +V SK G +E A ++ M E + W +
Sbjct: 122 ALRIGKGVHCHAVVSGFGLDTYVQ--AALVTFYSKCGDMEGARQVFDRMP-EKSIVAWNS 178
Query: 448 LLSGCKLHRNLEIANVAVQNLMIL-----EPSNSGYYSLL 482
L+SG + + +A+ A+Q + EP ++ + SLL
Sbjct: 179 LVSGFEQN---GLADEAIQVFYQMRESGFEPDSATFVSLL 215
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 158/547 (28%), Positives = 262/547 (47%), Gaps = 74/547 (13%)
Query: 28 KKTLESVYANMIKTNANQDSFLMNQFIAACT------TINLATHAFSHMDNPNALVYNAL 81
K L ++A +++T+ ++S + + F++ IN + FS NP N +
Sbjct: 24 KLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTM 83
Query: 82 LRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSL-VKACTLLMDSAAGKTVHGHVWKRG 140
+R + + + RN +P + SS +K C D G +HG
Sbjct: 84 IRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHG------ 137
Query: 141 FDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFD 200
K+F + D+ TT++ + C A ++FD
Sbjct: 138 -------------------------KIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFD 172
Query: 201 EMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTL 260
E+ P +D +SW L +CY RNKR DV+ L
Sbjct: 173 EI-------------------------------PKRDTVSWNVLFSCYLRNKRTRDVLVL 201
Query: 261 FHEM---VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDM 317
F +M V + PD V + ACA+LGAL GK+VH ++ NG + + ++L+ M
Sbjct: 202 FDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSM 261
Query: 318 YAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTF 377
Y++CGS+D++ VFY ++ +N+ W ++I GLA +G+ KEA++ F+EM + GI P T
Sbjct: 262 YSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTL 321
Query: 378 VSVLTACTHAGFVEEGRSRFVSMIE-DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
+L+AC+H+G V EG F M ++ I P + HYGC+VDLL + L++ A +I+ M
Sbjct: 322 TGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSM 381
Query: 437 TFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVS 496
+P+S IW LL C++H ++E+ + +L+ L+ +G Y LL+N Y+ V +W++V+
Sbjct: 382 EMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVT 441
Query: 497 KIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYV 556
++R MK+ + T PG S +E+ +H F D H + AGYV
Sbjct: 442 ELRSLMKEKRIH-TKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYV 500
Query: 557 PELGSIL 563
E+ S L
Sbjct: 501 AEITSEL 507
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 161/555 (29%), Positives = 277/555 (49%), Gaps = 48/555 (8%)
Query: 20 IKRC-SKREKKTLESVYANMIKTNANQD---SFLMNQFIAACTTINLATHAFSHMDNPNA 75
+++C +R ++++ A+M+K+ + S L++ + C I+ A F M +
Sbjct: 72 LRQCIDERSISGIKTIQAHMLKSGFPAEISGSKLVDASLK-CGDIDYARQVFDGMSERHI 130
Query: 76 LVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGH 135
+ +N+L+ + RS +A+ Y M+ N V+P Y+ SS+ KA + L + HG
Sbjct: 131 VTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGL 190
Query: 136 VWKRGFD-AHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDS 194
G + ++VFV + LV+ Y G +A+ V D + E+D T +I + + GE
Sbjct: 191 AVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTE 250
Query: 195 AARLFDEM------P---------------------------------ERNSATWNAMID 215
A + F M P E A+ +++
Sbjct: 251 AVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLT 310
Query: 216 GYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVA 275
Y + ++ + +F + + +SWT+L++ +N R + F +M+ + P+
Sbjct: 311 MYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFT 370
Query: 276 MTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ 335
+++ + C++L G+++H + GF D Y GS LID+Y KCG D + LVF L
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS 430
Query: 336 VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS 395
++ N+MI A +G+ +EAL +F M G++PN VT +SVL AC ++ VEEG
Sbjct: 431 EVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCE 490
Query: 396 RFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
F S +D + +HY CMVDLL + G +E+A EM+ P+ +W LLS CK+H
Sbjct: 491 LFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVH 548
Query: 456 RNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSS 515
R +E+A + ++ +EP + G L+ N+YA +W V +++ MKD+ ++K P S
Sbjct: 549 RKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKN-PAMS 607
Query: 516 WVEINQKIHLFAASD 530
WVEIN++ H F A D
Sbjct: 608 WVEINKETHTFMAGD 622
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 160/361 (44%), Gaps = 51/361 (14%)
Query: 107 VPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARK 166
+ T+++FS L++ C + KT+ H+ K GF A + + LV+ G AR+
Sbjct: 62 LTTTHNFSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQ 120
Query: 167 VFDEMPERDAFAWTTMIS---AHVRCGEVDSAARLF---DEMPER--------------- 205
VFD M ER W ++I+ H R E RL + +P+
Sbjct: 121 VFDGMSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSL 180
Query: 206 -------------------NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMT 246
N +A++D Y K G A+++ +R+ KDV+ T L+
Sbjct: 181 EKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIV 240
Query: 247 CYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL 306
YS+ + V F M+ + P+E +V+ +C +L +G GK +H ++ +GF
Sbjct: 241 GYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFES 300
Query: 307 DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEME 366
+ +SL+ MY +C +D SL VF ++ N W S+I GL +G + AL F +M
Sbjct: 301 ALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMM 360
Query: 367 RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLI 426
R I+PN T S L C++ EEGR I + YG D + GLI
Sbjct: 361 RDSIKPNSFTLSSALRGCSNLAMFEEGRQ----------IHGIVTKYGFDRDKYAGSGLI 410
Query: 427 E 427
+
Sbjct: 411 D 411
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 257 bits (657), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/427 (32%), Positives = 227/427 (53%), Gaps = 38/427 (8%)
Query: 20 IKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDNPNAL 76
++ CS + L+ ++ +IK N D L+ Q I+ ++ +A F+ + +P+
Sbjct: 27 LRTCSNFSQ--LKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTF 84
Query: 77 VYNALLRTCVHCHRSHQALACYV-KMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGH 135
+N ++R+ H+ +AL ++ M+ + ++F ++KAC G VHG
Sbjct: 85 TWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGL 144
Query: 136 VWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSA 195
K GF VF Q TL++ Y +CG+ DS
Sbjct: 145 AIKAGFFNDVFFQNTLMDLY-------------------------------FKCGKPDSG 173
Query: 196 ARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFG 255
++FD+MP R+ +W M+ G + ++ AEI+FN+MP ++V+SWT ++T Y +N+R
Sbjct: 174 RKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPD 233
Query: 256 DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLI 315
+ LF M + P+E + ++ A LG+L +G+ VH Y NGF LD ++G++LI
Sbjct: 234 EAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALI 293
Query: 316 DMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG-IRPNG 374
DMY+KCGS+ + VF +Q K+L WNSMI L HG +EAL +F EME + + P+
Sbjct: 294 DMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDA 353
Query: 375 VTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIR 434
+TFV VL+AC + G V++G F MI+ Y ISP EH CM+ LL + +E A ++
Sbjct: 354 ITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLVE 413
Query: 435 GMTFEPN 441
M +P+
Sbjct: 414 SMDSDPD 420
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/557 (28%), Positives = 260/557 (46%), Gaps = 46/557 (8%)
Query: 49 LMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVP 108
L+ + A ++ A F M + + +N+L+ + V+ RS AL M+ +G
Sbjct: 285 LLRMYAGAGRSVE-ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 343
Query: 109 TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF 168
+F+S + AC G+ +HG V G + + LV Y +G ++R+V
Sbjct: 344 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 403
Query: 169 DEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP------------------------- 203
+MP RD AW +I + + D A F M
Sbjct: 404 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 463
Query: 204 ---------------ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCY 248
E + N++I YAK G++ ++ LFN + +++I+W ++
Sbjct: 464 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 523
Query: 249 SRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDV 308
+ + +V+ L +M S G++ D+ + + +SA A L L G+++H + GF D
Sbjct: 524 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 583
Query: 309 YIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
+I ++ DMY+KCG I + + ++L WN +I L HGY +E F EM
Sbjct: 584 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 643
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIED 428
GI+P VTFVS+LTAC+H G V++G + + + D+ + P IEH C++DLL + G + +
Sbjct: 644 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 703
Query: 429 ALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAE 488
A I M +PN +W +LL+ CK+H NL+ A +NL LEP + Y L NM+A
Sbjct: 704 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 763
Query: 489 VNRWKEVSKIRIAM--KDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXX 546
RW++V +R M K++ ++ C SWV++ K+ F D H +
Sbjct: 764 TGRWEDVENVRKQMGFKNIKKKQAC---SWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 820
Query: 547 XXXXXXAGYVPELGSIL 563
+GYV + L
Sbjct: 821 KKLIKESGYVADTSQAL 837
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 200/440 (45%), Gaps = 50/440 (11%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
++ + F M + N + + +L+ + + Y M GV S S ++ +
Sbjct: 93 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 152
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAW 179
C LL D + G+ + G V K G ++ + V+ +L+ +G A +FD+M ERD +W
Sbjct: 153 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 212
Query: 180 TTMISAHVRCGEVDSAARLFDEM----PERNSAT---------------W---------- 210
++ +A+ + G ++ + R+F M E NS T W
Sbjct: 213 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 272
Query: 211 ----------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTL 260
N ++ YA +G A ++F +MP KD+ISW +LM + + R D + L
Sbjct: 273 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 332
Query: 261 FHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAK 320
M+S G + + V T+ ++AC G+ +H ++V+G + IG++L+ MY K
Sbjct: 333 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK 392
Query: 321 CGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSV 380
G + S V ++ +++ WN++I G A +AL F M +G+ N +T VSV
Sbjct: 393 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 452
Query: 381 LTACTHAG-FVEEGRSRFVSMIEDYCISPGIEH----YGCMVDLLSKGGLIEDALEMIRG 435
L+AC G +E G+ + Y +S G E ++ + +K G + + ++ G
Sbjct: 453 LSACLLPGDLLERGKP-----LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 507
Query: 436 MTFEPNSFIWGALLSGCKLH 455
+ N W A+L+ H
Sbjct: 508 LD-NRNIITWNAMLAANAHH 526
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 201/455 (44%), Gaps = 55/455 (12%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKAC----TLLMDSAAG 129
N + +N ++ V + + + KM G+ P+S+ +SLV AC ++ + G
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE---G 61
Query: 130 KTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRC 189
VHG V K G + V+V T ++ Y + GL +RKVF+EMP+R+ +WT+++ +
Sbjct: 62 VQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDK 121
Query: 190 GEVDSAARLFDEMP---------------------------------------ERNSATW 210
GE + ++ M E A
Sbjct: 122 GEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVE 181
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
N++I GN++ A +F++M +D ISW ++ Y++N + +F M
Sbjct: 182 NSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDE 241
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
+ ++T++S H+ G+ +H ++ GF V + ++L+ MYA G + LV
Sbjct: 242 VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLV 301
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
F ++ K+L WNS++ G + +AL + M G N VTF S L AC F
Sbjct: 302 FKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFF 361
Query: 391 EEGRSRFVSMIEDYCISPGIEHYGCMVD-LLSKGGLIEDALEMIRGMTFEPNSFI--WGA 447
E+GR ++ + G+ + + + L+S G I + E R + P + W A
Sbjct: 362 EKGR-----ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNA 416
Query: 448 LLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLL 482
L+ G + + A A Q M +E +S Y +++
Sbjct: 417 LIGGYAEDEDPDKALAAFQT-MRVEGVSSNYITVV 450
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
Query: 233 MPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGAL-GL 291
MP ++ +SW T+M+ R + + + F +M G+ P + ++++AC G++
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
G +VH ++ +G DVY+ ++++ +Y G + S VF ++ +N+ W S++ G +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
G +E + ++ M +G+ N + V+++C
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 153
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 154/368 (41%), Gaps = 31/368 (8%)
Query: 32 ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
+ ++A ++ D + N I A C ++ + F+ +DN N + +NA+L H
Sbjct: 467 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 526
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
+ L KM GV +SFS + A L G+ +HG K GF+ F+
Sbjct: 527 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIF 586
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE---- 204
+ YS G G+ K+ R +W +ISA R G + F EM E
Sbjct: 587 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 646
Query: 205 RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTC------YSRNKRFGDVV 258
T+ +++ + G ++ + + M +D + C R+ R +
Sbjct: 647 PGHVTFVSLLTACSHGGLVDKG-LAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 705
Query: 259 TLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL-MVNGFGLDVYIGSSLIDM 317
T +M + P+++ +++++C G L G++ L + VY+ SS +M
Sbjct: 706 TFISKMP---MKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS--NM 760
Query: 318 YAKCGSID-----RSLLVFYKLQVKNLFCWNSMIDGLATHGYAK----EALKMFSEME-- 366
+A G + R + F ++ K W + D +++ G + +++++++E
Sbjct: 761 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 820
Query: 367 RKGIRPNG 374
+K I+ +G
Sbjct: 821 KKLIKESG 828
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 257 bits (656), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 156/557 (28%), Positives = 260/557 (46%), Gaps = 46/557 (8%)
Query: 49 LMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVP 108
L+ + A ++ A F M + + +N+L+ + V+ RS AL M+ +G
Sbjct: 302 LLRMYAGAGRSVE-ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSV 360
Query: 109 TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF 168
+F+S + AC G+ +HG V G + + LV Y +G ++R+V
Sbjct: 361 NYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVL 420
Query: 169 DEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP------------------------- 203
+MP RD AW +I + + D A F M
Sbjct: 421 LQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLL 480
Query: 204 ---------------ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCY 248
E + N++I YAK G++ ++ LFN + +++I+W ++
Sbjct: 481 ERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAAN 540
Query: 249 SRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDV 308
+ + +V+ L +M S G++ D+ + + +SA A L L G+++H + GF D
Sbjct: 541 AHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDS 600
Query: 309 YIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
+I ++ DMY+KCG I + + ++L WN +I L HGY +E F EM
Sbjct: 601 FIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEM 660
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIED 428
GI+P VTFVS+LTAC+H G V++G + + + D+ + P IEH C++DLL + G + +
Sbjct: 661 GIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAE 720
Query: 429 ALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAE 488
A I M +PN +W +LL+ CK+H NL+ A +NL LEP + Y L NM+A
Sbjct: 721 AETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFAT 780
Query: 489 VNRWKEVSKIRIAM--KDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXX 546
RW++V +R M K++ ++ C SWV++ K+ F D H +
Sbjct: 781 TGRWEDVENVRKQMGFKNIKKKQAC---SWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 837
Query: 547 XXXXXXAGYVPELGSIL 563
+GYV + L
Sbjct: 838 KKLIKESGYVADTSQAL 854
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 200/440 (45%), Gaps = 50/440 (11%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
++ + F M + N + + +L+ + + Y M GV S S ++ +
Sbjct: 110 VSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISS 169
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAW 179
C LL D + G+ + G V K G ++ + V+ +L+ +G A +FD+M ERD +W
Sbjct: 170 CGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISW 229
Query: 180 TTMISAHVRCGEVDSAARLFDEM----PERNSAT---------------W---------- 210
++ +A+ + G ++ + R+F M E NS T W
Sbjct: 230 NSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVK 289
Query: 211 ----------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTL 260
N ++ YA +G A ++F +MP KD+ISW +LM + + R D + L
Sbjct: 290 MGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGL 349
Query: 261 FHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAK 320
M+S G + + V T+ ++AC G+ +H ++V+G + IG++L+ MY K
Sbjct: 350 LCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGK 409
Query: 321 CGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSV 380
G + S V ++ +++ WN++I G A +AL F M +G+ N +T VSV
Sbjct: 410 IGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSV 469
Query: 381 LTACTHAG-FVEEGRSRFVSMIEDYCISPGIEH----YGCMVDLLSKGGLIEDALEMIRG 435
L+AC G +E G+ + Y +S G E ++ + +K G + + ++ G
Sbjct: 470 LSACLLPGDLLERGKP-----LHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNG 524
Query: 436 MTFEPNSFIWGALLSGCKLH 455
+ N W A+L+ H
Sbjct: 525 LD-NRNIITWNAMLAANAHH 543
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 206/469 (43%), Gaps = 55/469 (11%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
+ A H F M N + +N ++ V + + + KM G+ P+S+ +SLV A
Sbjct: 8 VKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTA 67
Query: 120 C----TLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD 175
C ++ + G VHG V K G + V+V T ++ Y + GL +RKVF+EMP+R+
Sbjct: 68 CGRSGSMFRE---GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRN 124
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEMP-------------------------------- 203
+WT+++ + GE + ++ M
Sbjct: 125 VVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIG 184
Query: 204 -------ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGD 256
E A N++I GN++ A +F++M +D ISW ++ Y++N +
Sbjct: 185 QVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEE 244
Query: 257 VVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLID 316
+F M + ++T++S H+ G+ +H ++ GF V + ++L+
Sbjct: 245 SFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 304
Query: 317 MYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVT 376
MYA G + LVF ++ K+L WNS++ G + +AL + M G N VT
Sbjct: 305 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 364
Query: 377 FVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVD-LLSKGGLIEDALEMIRG 435
F S L AC F E+GR ++ + G+ + + + L+S G I + E R
Sbjct: 365 FTSALAACFTPDFFEKGR-----ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRV 419
Query: 436 MTFEPNSFI--WGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLL 482
+ P + W AL+ G + + A A Q M +E +S Y +++
Sbjct: 420 LLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQT-MRVEGVSSNYITVV 467
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 91/169 (53%), Gaps = 1/169 (0%)
Query: 217 YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAM 276
Y K G ++ A LF+ MP ++ +SW T+M+ R + + + F +M G+ P +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 277 TTVISACAHLGAL-GLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ 335
++++AC G++ G +VH ++ +G DVY+ ++++ +Y G + S VF ++
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 336 VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
+N+ W S++ G + G +E + ++ M +G+ N + V+++C
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 170
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/368 (21%), Positives = 154/368 (41%), Gaps = 31/368 (8%)
Query: 32 ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
+ ++A ++ D + N I A C ++ + F+ +DN N + +NA+L H
Sbjct: 484 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 543
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
+ L KM GV +SFS + A L G+ +HG K GF+ F+
Sbjct: 544 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIF 603
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE---- 204
+ YS G G+ K+ R +W +ISA R G + F EM E
Sbjct: 604 NAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIK 663
Query: 205 RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTC------YSRNKRFGDVV 258
T+ +++ + G ++ + + M +D + C R+ R +
Sbjct: 664 PGHVTFVSLLTACSHGGLVDKG-LAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 722
Query: 259 TLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL-MVNGFGLDVYIGSSLIDM 317
T +M + P+++ +++++C G L G++ L + VY+ SS +M
Sbjct: 723 TFISKMP---MKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSS--NM 777
Query: 318 YAKCGSID-----RSLLVFYKLQVKNLFCWNSMIDGLATHGYA----KEALKMFSEME-- 366
+A G + R + F ++ K W + D +++ G + +++++++E
Sbjct: 778 FATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDI 837
Query: 367 RKGIRPNG 374
+K I+ +G
Sbjct: 838 KKLIKESG 845
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 317 MYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVT 376
MY K G + + +F + V+N WN+M+ G+ G E ++ F +M GI+P+
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 377 FVSVLTACTHAG 388
S++TAC +G
Sbjct: 61 IASLVTACGRSG 72
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 255 bits (651), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 156/508 (30%), Positives = 253/508 (49%), Gaps = 45/508 (8%)
Query: 23 CSKREKKTLESVYAN---------MIKTNANQDSFLMNQFI---AACTTINLATHAFSHM 70
C + +L +VYA M++ D ++ I A C +N + F
Sbjct: 220 CDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRK 279
Query: 71 DNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGK 130
N +++N+++ + + +AL + +M RN S + ++++ AC L GK
Sbjct: 280 SNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAVINACIGLGFLETGK 338
Query: 131 TVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCG 190
+H H K G + V +TL++ YS +CG
Sbjct: 339 QMHCHACKFGLIDDIVVASTLLDMYS-------------------------------KCG 367
Query: 191 EVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSR 250
A +LF E+ ++ N+MI Y G I+ A+ +F R+ K +ISW ++ +S+
Sbjct: 368 SPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQ 427
Query: 251 NKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI 310
N + + FH+M L DEV++++VISACA + +L LG++V + G D +
Sbjct: 428 NGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVV 487
Query: 311 GSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGI 370
SSLID+Y KCG ++ VF + + WNSMI G AT+G EA+ +F +M GI
Sbjct: 488 SSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGI 547
Query: 371 RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL 430
RP +TF+ VLTAC + G VEEGR F SM D+ P EH+ CMVDLL++ G +E+A+
Sbjct: 548 RPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAI 607
Query: 431 EMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVN 490
++ M F+ + +W ++L GC + + A + ++ LEP NS Y L ++A
Sbjct: 608 NLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSG 667
Query: 491 RWKEVSKIRIAMKDLGVEKTCPGSSWVE 518
W+ + +R M++ V K PGSSW +
Sbjct: 668 DWESSALVRKLMRENNVTKN-PGSSWTD 694
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 164/314 (52%), Gaps = 36/314 (11%)
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGF-DAHVFVQTTLVEFYSMLGLAGDARKVFDEM 171
+ L+++C+ + +G + K+GF + V V L++ YS G G AR +FDEM
Sbjct: 29 YVRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEM 88
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFN 231
P+R+ F+W TMI ++ GE ++ R FD MPER+ +WN ++ G+AK+G + A LFN
Sbjct: 89 PDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFN 148
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
MP KDV++ +L+ Y N + + LF E+ + D + +TTV+ ACA L AL
Sbjct: 149 AMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLKACAELEALKC 205
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGS---------------------------- 323
GK++H +++ G D + SSL+++YAKCG
Sbjct: 206 GKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYAN 265
Query: 324 ---IDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSV 380
++ S +F + + + WNSMI G + EAL +F+EM R R + T +V
Sbjct: 266 CGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM-RNETREDSRTLAAV 324
Query: 381 LTACTHAGFVEEGR 394
+ AC GF+E G+
Sbjct: 325 INACIGLGFLETGK 338
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 186/433 (42%), Gaps = 78/433 (18%)
Query: 55 AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFS 114
A +++A F+ M + + N+LL + + +AL + ++ + + +
Sbjct: 135 AKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLT 191
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
+++KAC L GK +H + G + + ++LV Y+ G A + +++ E
Sbjct: 192 TVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREP 251
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMP 234
D + + +IS + CG V+ + LFD R WN+MI GY + A +LFN M
Sbjct: 252 DDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEM- 310
Query: 235 CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKE 294
RN+ D SR LA VI+AC LG L GK+
Sbjct: 311 ---------------RNETRED---------SRTLA-------AVINACIGLGFLETGKQ 339
Query: 295 VHHYLMVNGFGLDVYIGSSLIDMYAKCGS------------------------------- 323
+H + G D+ + S+L+DMY+KCGS
Sbjct: 340 MHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGR 399
Query: 324 IDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTA 383
ID + VF +++ K+L WNSM +G + +G E L+ F +M + + + V+ SV++A
Sbjct: 400 IDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISA 459
Query: 384 CTHAGFVEEG-----RSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF 438
C +E G R+ V + D +S ++DL K G +E + M
Sbjct: 460 CASISSLELGEQVFARATIVGLDSDQVVSSS------LIDLYCKCGFVEHGRRVFDTMV- 512
Query: 439 EPNSFIWGALLSG 451
+ + W +++SG
Sbjct: 513 KSDEVPWNSMISG 525
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 254 bits (650), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 172/622 (27%), Positives = 274/622 (44%), Gaps = 91/622 (14%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAA---CTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
ES +A + T + F+ N +A C +++ A F M + + +N+++ +
Sbjct: 147 ESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKL 206
Query: 89 HRSHQALACYVKMLRN-GVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
+ AL + +M G P + + +++ C L + GK +H ++FV
Sbjct: 207 GKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFV 266
Query: 148 QTTLVEFY-------------------------------SMLGLAGDARKVFDEMPER-- 174
LV+ Y S +G DA ++F++M E
Sbjct: 267 GNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKI 326
Query: 175 --DAFAWTTMISAH---------------------------------------------- 186
D W+ IS +
Sbjct: 327 KMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKE 386
Query: 187 VRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCK--DVISWTTL 244
+ C + L + N +ID YAK ++ A +F+ + K DV++WT +
Sbjct: 387 IHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVM 446
Query: 245 MTCYSRNKRFGDVVTLFHEMVSRGLA--PDEVAMTTVISACAHLGALGLGKEVHHYLMVN 302
+ YS++ + L EM P+ ++ + ACA L AL +GK++H Y + N
Sbjct: 447 IGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN 506
Query: 303 GF-GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKM 361
+ +++ + LIDMYAKCGSI + LVF + KN W S++ G HGY +EAL +
Sbjct: 507 QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGI 566
Query: 362 FSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLS 421
F EM R G + +GVT + VL AC+H+G +++G F M + +SPG EHY C+VDLL
Sbjct: 567 FDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLG 626
Query: 422 KGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSL 481
+ G + AL +I M EP +W A LS C++H +E+ A + + L ++ G Y+L
Sbjct: 627 RAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTL 686
Query: 482 LVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNX 541
L N+YA RWK+V++IR M+ GV+K PG SWVE + F D H +
Sbjct: 687 LSNLYANAGRWKDVTRIRSLMRHKGVKKR-PGCSWVEGIKGTTTFFVGDKTHPHAKEIYQ 745
Query: 542 XXXXXXXXXXXAGYVPELGSIL 563
GYVPE G L
Sbjct: 746 VLLDHMQRIKDIGYVPETGFAL 767
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 138/498 (27%), Positives = 215/498 (43%), Gaps = 92/498 (18%)
Query: 49 LMNQFIAACTTINLATHAFS---HMDNPNALVY--NALLRTCVHCHRSHQALACYVKMLR 103
L + I+ ++ +HA S +A VY N+L+R+ +++ L + M
Sbjct: 61 LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHS 120
Query: 104 NGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGD 163
P +Y+F + KAC + G++ H GF ++VFV LV YS D
Sbjct: 121 LSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSD 180
Query: 164 ARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM-------PE------------ 204
ARKVFDEM D +W ++I ++ + G+ A +F M P+
Sbjct: 181 ARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCA 240
Query: 205 ---------------------RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTT 243
+N N ++D YAK G ++ A +F+ M KDV+SW
Sbjct: 241 SLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNA 300
Query: 244 LMTCYSRNKRFGDVVTLFH-----------------------------------EMVSRG 268
++ YS+ RF D V LF +M+S G
Sbjct: 301 MVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSG 360
Query: 269 LAPDEVAMTTVISACAHLGALGLGKEVHHY-------LMVNGFGLDVYIGSSLIDMYAKC 321
+ P+EV + +V+S CA +GAL GKE+H Y L NG G + + + LIDMYAKC
Sbjct: 361 IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKC 420
Query: 322 GSIDRSLLVFYKLQVK--NLFCWNSMIDGLATHGYAKEALKMFSEM--ERKGIRPNGVTF 377
+D + +F L K ++ W MI G + HG A +AL++ SEM E RPN T
Sbjct: 421 KKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTI 480
Query: 378 VSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT 437
L AC + G+ + + + + C++D+ +K G I DA + M
Sbjct: 481 SCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNM- 539
Query: 438 FEPNSFIWGALLSGCKLH 455
N W +L++G +H
Sbjct: 540 MAKNEVTWTSLMTGYGMH 557
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 169/368 (45%), Gaps = 52/368 (14%)
Query: 142 DAHVFVQTTLVEFYSMLGLAGDARKVFDEM------PERDAFAWTTMISAH---VRCGEV 192
DA V+ +L+ Y G A +F M P+ F + VRCGE
Sbjct: 89 DAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGES 148
Query: 193 DSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
A L N NA++ Y++ ++ A +F+ M DV+SW +++ Y++
Sbjct: 149 AHALSLVTGFIS-NVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 253 RFGDVVTLFHEMVSR-GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG 311
+ + +F M + G PD + + V+ CA LG LGK++H + + + ++++G
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVG 267
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
+ L+DMYAKCG +D + VF + VK++ WN+M+ G + G ++A+++F +M+ + I+
Sbjct: 268 NCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIK 327
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALE 431
+ VT+ + ++ G+ + G G E G +LS G
Sbjct: 328 MDVVTWSAAIS-----GYAQRGL--------------GYEALGVCRQMLSSG-------- 360
Query: 432 MIRGMTFEPNSFIWGALLSGC----KLHRNLEIANVAVQNLMILEPSNSGYYSLLVN--- 484
+PN ++LSGC L EI A++ + L + G ++++N
Sbjct: 361 ------IKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLI 414
Query: 485 -MYAEVNR 491
MYA+ +
Sbjct: 415 DMYAKCKK 422
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 143/517 (27%), Positives = 268/517 (51%), Gaps = 46/517 (8%)
Query: 15 KILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINL--ATHAFSHMDN 72
K+++ ++ C R+ + ++ M+KT ++D F +++ +A + +++ A+ F H+ N
Sbjct: 30 KLINDLRSC--RDTVEVSRIHGYMVKTGLDKDDFAVSKLLAFSSVLDIRYASSIFEHVSN 87
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
N ++N ++R +A + + ++ G+ +SF + +K+C+ + + G+ +
Sbjct: 88 TNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGL 147
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER-DAFAWTTMISAHVRCGE 191
HG + GF ++ L+ FY + G DARKVFDEMP+ DA ++T+++ +++ +
Sbjct: 148 HGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSK 207
Query: 192 VDSAARLFDEMPER----NSATW-----------------------------------NA 212
A LF M + N +T A
Sbjct: 208 KALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITA 267
Query: 213 MIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPD 272
+I Y K+G I A +F+ KDV++W ++ Y++ + V L +M + P+
Sbjct: 268 LIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPN 327
Query: 273 EVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFY 332
++S+CA+ A +G+ V L LD +G++L+DMYAK G +++++ +F
Sbjct: 328 SSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFN 387
Query: 333 KLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG--IRPNGVTFVSVLTACTHAGFV 390
+++ K++ W +MI G HG A+EA+ +F++ME + +RPN +TF+ VL AC+H G V
Sbjct: 388 RMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLV 447
Query: 391 EEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLS 450
EG F M+E Y +P +EHYGC+VDLL + G +E+A E+IR + +S W ALL+
Sbjct: 448 MEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLA 507
Query: 451 GCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYA 487
C+++ N ++ + L + ++ LL +A
Sbjct: 508 ACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHA 544
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 253 bits (645), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 146/461 (31%), Positives = 235/461 (50%), Gaps = 42/461 (9%)
Query: 114 SSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE 173
SSL+ A + + +H V K H F+ LV Y LG A K+FDEMPE
Sbjct: 35 SSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPE 94
Query: 174 RDAFAWTTMISAHV------RCGEVDSAARLFDEMPERNSATW----------------- 210
RD +W ++IS + +C EV S + + N T+
Sbjct: 95 RDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGR 154
Query: 211 ------------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
NA I+ Y K+G++ + LF + K+++SW T++ + +N
Sbjct: 155 CIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNG 214
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
+ F+ G PD+ V+ +C +G + L + +H +M GF + I +
Sbjct: 215 LAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITT 274
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRP 372
+L+D+Y+K G ++ S VF+++ + W +M+ ATHG+ ++A+K F M GI P
Sbjct: 275 ALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISP 334
Query: 373 NGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM 432
+ VTF +L AC+H+G VEEG+ F +M + Y I P ++HY CMVDLL + GL++DA +
Sbjct: 335 DHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGL 394
Query: 433 IRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRW 492
I+ M EP+S +WGALL C+++++ ++ A + L LEP + Y +L N+Y+ W
Sbjct: 395 IKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLW 454
Query: 493 KEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYH 533
K+ S+IR MK G+ + G S++E KIH F D H
Sbjct: 455 KDASRIRNLMKQKGLVRA-SGCSYIEHGNKIHKFVVGDWSH 494
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 141/340 (41%), Gaps = 57/340 (16%)
Query: 34 VYANMIKTNANQDSFLMNQFIAACTTIN---LATHAFSHMDNPNALVYNALLRTCVHCHR 90
++ ++K+ + + F+ +Q + + A F M + + +N+L+ + R
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISG--YSGR 110
Query: 91 SHQALACYVKMLRN-----GVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHV 145
+ C+ + R G P +F S++ AC G+ +HG V K G V
Sbjct: 111 GYLG-KCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEV 169
Query: 146 FVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFD----- 200
V + +Y G + K+F+++ ++ +W TMI H++ G + F+
Sbjct: 170 KVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRV 229
Query: 201 -EMPER---------------------------------NSATWNAMIDGYAKSGNIECA 226
P++ N A++D Y+K G +E +
Sbjct: 230 GHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDS 289
Query: 227 EILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
+F+ + D ++WT ++ Y+ + D + F MV G++PD V T +++AC+H
Sbjct: 290 STVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHS 349
Query: 287 GALGLGKEVHHYL--MVNGFGLDVYIG--SSLIDMYAKCG 322
G + GK HY M + +D + S ++D+ + G
Sbjct: 350 GLVEEGK---HYFETMSKRYRIDPRLDHYSCMVDLLGRSG 386
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 251 bits (642), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 151/525 (28%), Positives = 255/525 (48%), Gaps = 46/525 (8%)
Query: 38 MIKTNANQDSFLMNQFIAACTTI---NLATHAFSHMDNPNALVYNALLRTCVH-----CH 89
M+K FL N+ + A T I + A F M N + +N L+ + H
Sbjct: 62 MVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGDTNH 121
Query: 90 RSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQT 149
R+H ++L V SF L++ CT + AG +H + K+G ++ F T
Sbjct: 122 RAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPST 181
Query: 150 TLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSA-------------- 195
+LV FY GL +AR+VF+ + +RD W ++S++V G +D A
Sbjct: 182 SLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRF 241
Query: 196 -----------------------ARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNR 232
A LF + + A+++ YAKS ++ A F
Sbjct: 242 RGDYFTFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFES 301
Query: 233 MPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLG 292
M ++V+SW ++ +++N + + LF +M+ L PDE+ +V+S+CA A+
Sbjct: 302 MVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEI 361
Query: 293 KEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATH 352
K+V + G + + +SLI Y++ G++ +LL F+ ++ +L W S+I LA+H
Sbjct: 362 KQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASH 421
Query: 353 GYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH 412
G+A+E+L+MF M +K ++P+ +TF+ VL+AC+H G V+EG F M E Y I EH
Sbjct: 422 GFAEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEH 480
Query: 413 YGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILE 472
Y C++DLL + G I++A +++ M EP++ A GC +H E + L+ +E
Sbjct: 481 YTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIE 540
Query: 473 PSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWV 517
P+ YS+L N Y W + + +R + PG SW+
Sbjct: 541 PTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 156/512 (30%), Positives = 257/512 (50%), Gaps = 76/512 (14%)
Query: 15 KILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINL--ATHAFSHMDN 72
+ L+ I +C + + L+ ++A +I + ++ +++ + +T+ L A + N
Sbjct: 11 RCLNLISKC--KSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPN 68
Query: 73 PNALVYNALLRTCVHCHRS---HQALACYVKMLR---NGVVPTSYSFSSLVKACTLLMDS 126
P+ +YN L+ + V H S H A + Y ++L N V P +++ SL KA
Sbjct: 69 PSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKA------- 121
Query: 127 AAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAH 186
+G H R AHV F E D F
Sbjct: 122 -SGFDAQWHRHGRALHAHVLK--------------------FLEPVNHDRFVQA------ 154
Query: 187 VRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMT 246
A++ YA G + A LF R+ D+ +W TL+
Sbjct: 155 -------------------------ALVGFYANCGKLREARSLFERIREPDLATWNTLLA 189
Query: 247 CYSRNKRFG---DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNG 303
Y+ ++ +V+ LF M R P+E+++ +I +CA+LG G H Y++ N
Sbjct: 190 AYANSEEIDSDEEVLLLFMRMQVR---PNELSLVALIKSCANLGEFVRGVWAHVYVLKNN 246
Query: 304 FGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFS 363
L+ ++G+SLID+Y+KCG + + VF ++ +++ C+N+MI GLA HG+ +E ++++
Sbjct: 247 LTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYK 306
Query: 364 EMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKG 423
+ +G+ P+ TFV ++AC+H+G V+EG F SM Y I P +EHYGC+VDLL +
Sbjct: 307 SLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRS 366
Query: 424 GLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLV 483
G +E+A E I+ M +PN+ +W + L + H + E +A+++L+ LE NSG Y LL
Sbjct: 367 GRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVLLS 426
Query: 484 NMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSS 515
N+YA VNRW +V K R MKD V K+ PG S
Sbjct: 427 NIYAGVNRWTDVEKTRELMKDHRVNKS-PGIS 457
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/475 (30%), Positives = 235/475 (49%), Gaps = 42/475 (8%)
Query: 130 KTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRC 189
K +H V + GF + T L+E ++G AR+VFDEM + F W T+ +VR
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 190 GEVDSAARLFDEM------PERNSATW--------------------------------- 210
+ L+ +M P+ + +
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVA 147
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
++ Y K G + AE LF M KD+++W + + + F++M + +
Sbjct: 148 TELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQ 207
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
D + +++SAC LG+L +G+E++ ++ + ++ +DM+ KCG+ + + ++
Sbjct: 208 FDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVL 267
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
F +++ +N+ W++MI G A +G ++EAL +F+ M+ +G+RPN VTF+ VL+AC+HAG V
Sbjct: 268 FEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLV 327
Query: 391 EEGRSRFVSMIE--DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGAL 448
EG+ F M++ D + P EHY CMVDLL + GL+E+A E I+ M EP++ IWGAL
Sbjct: 328 NEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGAL 387
Query: 449 LSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVE 508
L C +HR++ + L+ P Y+ LL N+YA +W V K+R M+ LG +
Sbjct: 388 LGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTK 447
Query: 509 KTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELGSIL 563
K SS VE KIH F D H + GYVP+ S+
Sbjct: 448 KVAAYSS-VEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVF 501
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 171/388 (44%), Gaps = 48/388 (12%)
Query: 12 LKDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTIN---LATHAFS 68
L ++L ++ R S + K L+ ++A +++T ++ + L+ Q + I A F
Sbjct: 8 LTKQMLSELLRASSSKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFD 67
Query: 69 HMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAA 128
M P ++N L + V ++L Y KM GV P +++ +VKA + L D +
Sbjct: 68 EMHKPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSC 127
Query: 129 GKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAW--------- 179
G +H HV K GF V T LV Y G A +F+ M +D AW
Sbjct: 128 GFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQ 187
Query: 180 --------------------------TTMISAHVRCGEVDSAARLFD----EMPERNSAT 209
+M+SA + G ++ ++D E + N
Sbjct: 188 TGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIV 247
Query: 210 WNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGL 269
NA +D + K GN E A +LF M ++V+SW+T++ Y+ N + +TLF M + GL
Sbjct: 248 ENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGL 307
Query: 270 APDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSS----LIDMYAKCGSID 325
P+ V V+SAC+H G + GK + LMV ++ ++D+ + G ++
Sbjct: 308 RPNYVTFLGVLSACSHAGLVNEGKR-YFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLE 366
Query: 326 RSLLVFYKLQVK-NLFCWNSMIDGLATH 352
+ K+ V+ + W +++ A H
Sbjct: 367 EAYEFIKKMPVEPDTGIWGALLGACAVH 394
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 124/299 (41%), Gaps = 22/299 (7%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F M + + +NA L CV S AL + KM + V S++ S++ AC
Sbjct: 163 AEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQ 222
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
L G+ ++ K D ++ V+ ++ + G AR +F+EM +R+ +W+TM
Sbjct: 223 LGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTM 282
Query: 183 ISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRM----- 233
I + G+ A LF M N T+ ++ + +G + + F+ M
Sbjct: 283 IVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSND 342
Query: 234 ----PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGAL 289
P K+ + ++ R+ + +M + PD ++ ACA +
Sbjct: 343 KNLEPRKE--HYACMVDLLGRSGLLEEAYEFIKKM---PVEPDTGIWGALLGACAVHRDM 397
Query: 290 GLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGS---IDRSLLVFYKLQVKNLFCWNSM 345
LG++V L+ + Y L ++YA G +D+ KL K + ++S+
Sbjct: 398 ILGQKVADVLVETAPDIGSY-HVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSV 455
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 141/385 (36%), Positives = 208/385 (54%), Gaps = 37/385 (9%)
Query: 138 KRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAAR 197
K GF++HV+VQT LV Y + G MI AH +
Sbjct: 151 KLGFESHVYVQTALVGMYLVGG---------------------NMIDAH----------K 179
Query: 198 LFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDV 257
+FDEMPERN TWN MI G G+ E A +MP + V+SWTT++ Y+R + +
Sbjct: 180 VFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEA 239
Query: 258 VTLFHEMVS-RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGF-GLDVYIGSSLI 315
+ LF MV+ + P+E+ + ++ A +LG L + VH Y+ GF D+ + +SLI
Sbjct: 240 ILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLI 299
Query: 316 DMYAKCGSIDRSLLVFYKLQ--VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
D YAKCG I + F ++ KNL W +MI A HG KEA+ MF +MER G++PN
Sbjct: 300 DAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPN 359
Query: 374 GVTFVSVLTACTHAGFVEEGRSRFV-SMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM 432
VT +SVL AC+H G EE F +M+ +Y I+P ++HYGC+VD+L + G +E+A ++
Sbjct: 360 RVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKI 419
Query: 433 IRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRW 492
+ E + +W LL C ++ + E+A + LM LE S+ G Y L+ N++ R+
Sbjct: 420 ALEIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRF 479
Query: 493 KEVSKIRIAMKDLGVEKTCPGSSWV 517
+ + R M GV K PG S V
Sbjct: 480 LDAQRFRKQMDVRGVAK-LPGHSQV 503
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Query: 70 MDNPNALVYNALLRTCVHCHRSHQALACYVKMLR-NGVVPTSYSFSSLVKACTLLMDSAA 128
M N + + ++ + +A+ + +M+ + + P + +++ A L D
Sbjct: 215 MPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKM 274
Query: 129 GKTVHGHVWKRGF-DAHVFVQTTLVEFYSMLGLAGDARKVFDEMP--ERDAFAWTTMISA 185
+VH +V KRGF + V +L++ Y+ G A K F E+P ++ +WTTMISA
Sbjct: 275 CGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISA 334
Query: 186 HVRCGEVDSAARLFDEM 202
G A +F +M
Sbjct: 335 FAIHGMGKEAVSMFKDM 351
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 150/479 (31%), Positives = 244/479 (50%), Gaps = 41/479 (8%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
I A F + + + A++ V R +A + ++L G+ P ++F +++ +
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGS 102
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAW 179
T D GK +H + K G ++VFV + ++ Y L DAR
Sbjct: 103 STTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDAR-------------- 148
Query: 180 TTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVI 239
R FD+ + N + +I GY K E A LF MP + V+
Sbjct: 149 -----------------RCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVV 191
Query: 240 SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA-PDEVAMTTVISACAHLGALGLGKEVHH- 297
+W ++ +S+ R + V F +M+ G+ P+E I+A +++ + G GK +H
Sbjct: 192 TWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHAC 251
Query: 298 YLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ--VKNLFCWNSMIDGLATHGYA 355
+ G +V++ +SLI Y+KCG+++ SLL F KL+ +N+ WNSMI G A +G
Sbjct: 252 AIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRG 311
Query: 356 KEALKMFSEMERK-GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGI---E 411
+EA+ MF +M + +RPN VT + VL AC HAG ++EG F + DY P + E
Sbjct: 312 EEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELE 370
Query: 412 HYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMIL 471
HY CMVD+LS+ G ++A E+I+ M +P W ALL GC++H N +A +A ++ L
Sbjct: 371 HYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNKRLAKLAASKILEL 430
Query: 472 EPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASD 530
+P + Y +L N Y+ + W+ VS IR MK+ G+ K G SW+E+ +I +F +D
Sbjct: 431 DPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGL-KRFTGCSWIEVRDQIRVFVNAD 488
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 113/271 (41%), Gaps = 43/271 (15%)
Query: 186 HVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLM 245
H+ + +A ++FDE+PE DVIS T ++
Sbjct: 37 HIDSDLIRNAHKVFDEIPEL-------------------------------DVISATAVI 65
Query: 246 TCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFG 305
+ + R + F ++ G+ P+E TVI + + LGK++H Y + G
Sbjct: 66 GRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLA 125
Query: 306 LDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM 365
+V++GS++++ Y K ++ + F + N+ ++I G +EAL +F M
Sbjct: 126 SNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAM 185
Query: 366 ERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSK--- 422
+ + VT+ +V+ + G EE + FV M+ + + P + C + +S
Sbjct: 186 PERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIAS 241
Query: 423 ---GGLIEDALEMIRGMTFEPNSFIWGALLS 450
G I G F N F+W +L+S
Sbjct: 242 HGAGKSIHACAIKFLGKRF--NVFVWNSLIS 270
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 249 bits (637), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 144/524 (27%), Positives = 255/524 (48%), Gaps = 45/524 (8%)
Query: 52 QFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSY 111
Q C ++ A F M NA+ ++ +A+ + ML +G P S
Sbjct: 126 QMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSS 185
Query: 112 SFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEM 171
+++L+K+ G+ +H HV + G ++ ++T +V Y G A++VFD+M
Sbjct: 186 MYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQM 245
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLFDEMP---------------------------- 203
+ A T ++ + + G A +LF ++
Sbjct: 246 AVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGK 305
Query: 204 -----------ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
E + ++D Y K + E A F + + +SW+ +++ Y +
Sbjct: 306 QIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMS 365
Query: 253 RFGDVVTLFHEMVSRGLAP-DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG 311
+F + V F + S+ + + T++ AC+ L +G +VH + Y
Sbjct: 366 QFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE 425
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
S+LI MY+KCG +D + VF + ++ W + I G A +G A EAL++F +M G++
Sbjct: 426 SALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMK 485
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALE 431
PN VTF++VLTAC+HAG VE+G+ +M+ Y ++P I+HY CM+D+ ++ GL+++AL+
Sbjct: 486 PNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALK 545
Query: 432 MIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNR 491
++ M FEP++ W LSGC H+NLE+ +A + L L+P ++ Y L N+Y +
Sbjct: 546 FMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGK 605
Query: 492 WKEVSKIRIAMKD--LGVEKTCPGSSWVEINQKIHLFAASDNYH 533
W+E +++ M + L E +C SW++ KIH F D +H
Sbjct: 606 WEEAAEMMKLMNERMLKKELSC---SWIQEKGKIHRFIVGDKHH 646
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 183/406 (45%), Gaps = 47/406 (11%)
Query: 89 HRS-HQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
HR ++A +M + GV +SYS+ L +AC L + G+ +H + + V +
Sbjct: 61 HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLL 120
Query: 148 QTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLF-------D 200
Q +++ Y DA K+FDEM E +A + TTMISA+ G +D A LF D
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGD 180
Query: 201 EMPE--------------------------------RNSATWNAMIDGYAKSGNIECAEI 228
+ P N++ +++ Y K G + A+
Sbjct: 181 KPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKR 240
Query: 229 LFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA 288
+F++M K ++ T LM Y++ R D + LF ++V+ G+ D + V+ ACA L
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEE 300
Query: 289 LGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDG 348
L LGK++H + G +V +G+ L+D Y KC S + + F +++ N W+++I G
Sbjct: 301 LNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISG 360
Query: 349 LATHGYAKEALKMFSEMERKGIRP-NGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCIS 407
+EA+K F + K N T+ S+ AC+ G I+ I
Sbjct: 361 YCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIG 420
Query: 408 PGIEHYG--CMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
YG ++ + SK G ++DA E+ M P+ W A +SG
Sbjct: 421 ---SQYGESALITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISG 462
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 127/267 (47%), Gaps = 7/267 (2%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
N ++ Y + ++E A+ LF+ M + +S TT+++ Y+ V LF M++ G
Sbjct: 122 NCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
P TT++ + + AL G+++H +++ G + I + +++MY KCG + + V
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRV 241
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
F ++ VK ++ G G A++ALK+F ++ +G+ + F VL AC +
Sbjct: 242 FDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEEL 301
Query: 391 EEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLS 450
G+ + + + + + +VD K E A + + EPN W A++S
Sbjct: 302 NLGK-QIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSAIIS 359
Query: 451 G-CKLHRNLEIANVAVQNLMILEPSNS 476
G C++ + E AV+ L N+
Sbjct: 360 GYCQMSQFEE----AVKTFKSLRSKNA 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 67/146 (45%)
Query: 249 SRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDV 308
S++++ + EM G++ + + AC L +L G+ +H + + V
Sbjct: 59 SKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSV 118
Query: 309 YIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
+ + ++ MY +C S++ + +F ++ N +MI A G +A+ +FS M
Sbjct: 119 LLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLAS 178
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGR 394
G +P + ++L + + ++ GR
Sbjct: 179 GDKPPSSMYTTLLKSLVNPRALDFGR 204
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 249 bits (636), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 116/347 (33%), Positives = 199/347 (57%), Gaps = 1/347 (0%)
Query: 212 AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAP 271
+++ Y+ +G++E A +F+ MP +D++SW ++ C+S ++++ M + G+
Sbjct: 147 SLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCG 206
Query: 272 DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVF 331
D + ++S+CAH+ AL +G +H V++ ++LIDMYAKCGS++ ++ VF
Sbjct: 207 DSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVF 266
Query: 332 YKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVE 391
++ +++ WNSMI G HG+ EA+ F +M G+RPN +TF+ +L C+H G V+
Sbjct: 267 NGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVK 326
Query: 392 EGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
EG F M + ++P ++HYGCMVDL + G +E++LEMI + + +W LL
Sbjct: 327 EGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGS 386
Query: 452 CKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTC 511
CK+HRNLE+ VA++ L+ LE N+G Y L+ ++Y+ N + + +R ++ ++ T
Sbjct: 387 CKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQ-TV 445
Query: 512 PGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPE 558
PG SW+EI ++H F D H + AGY PE
Sbjct: 446 PGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPE 492
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 49/352 (13%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFIAACT-----TINLATHAFSHMD-NPNALVYNALL 82
K L +++++I + N + C +++ A F H D +P+ +N L+
Sbjct: 19 KKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTSDWNYLI 78
Query: 83 RTCVHCHRSHQALACYVKMLRNGVV-PTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGF 141
R + ++ Y +ML + V P ++F+ +K+C + +HG V + GF
Sbjct: 79 RGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGF 138
Query: 142 DAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDE 201
V T+LV YS G A KVFDEMP RD +W MI G + A ++
Sbjct: 139 LDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKR 198
Query: 202 MPER----NSATW-----------------------------------NAMIDGYAKSGN 222
M +S T NA+ID YAK G+
Sbjct: 199 MGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGS 258
Query: 223 IECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA 282
+E A +FN M +DV++W +++ Y + + ++ F +MV+ G+ P+ + ++
Sbjct: 259 LENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLG 318
Query: 283 CAHLGALGLGKEVHHYLMVNGFGL--DVYIGSSLIDMYAKCGSIDRSLLVFY 332
C+H G + G E H +M + F L +V ++D+Y + G ++ SL + Y
Sbjct: 319 CSHQGLVKEGVE-HFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIY 369
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 124/273 (45%), Gaps = 45/273 (16%)
Query: 190 GEVDSAARLFDEM-PERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCY 248
G + A LFD + +++ WN +I G++ S + + + +NRM L++
Sbjct: 53 GSLSHAQLLFDHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRM----------LLSSV 102
Query: 249 SRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDV 308
SR PD + +C + ++ E+H ++ +GF D
Sbjct: 103 SR--------------------PDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDA 142
Query: 309 YIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
+ +SL+ Y+ GS++ + VF ++ V++L WN MI + G +AL M+ M +
Sbjct: 143 IVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNE 202
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGC------MVDLLSK 422
G+ + T V++L++C H + G + + I+ I C ++D+ +K
Sbjct: 203 GVCGDSYTLVALLSSCAHVSALNMG-------VMLHRIACDIRCESCVFVSNALIDMYAK 255
Query: 423 GGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
G +E+A+ + GM + + W +++ G +H
Sbjct: 256 CGSLENAIGVFNGMR-KRDVLTWNSMIIGYGVH 287
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 131/311 (42%), Gaps = 49/311 (15%)
Query: 20 IKRCS--KREKKTLESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPN 74
+K C K K LE ++ ++I++ D+ + + +A ++ +A+ F M +
Sbjct: 114 LKSCERIKSIPKCLE-IHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRD 172
Query: 75 ALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHG 134
+ +N ++ H +QAL+ Y +M GV SY+ +L+ +C + G +H
Sbjct: 173 LVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHR 232
Query: 135 HVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMI----------- 183
++ VFV L++ Y+ G +A VF+ M +RD W +MI
Sbjct: 233 IACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVE 292
Query: 184 ---------SAHVR------------C---GEVDSAARLFDEMPER-----NSATWNAMI 214
++ VR C G V F+ M + N + M+
Sbjct: 293 AISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMV 352
Query: 215 DGYAKSGNIECA-EILFNRMPCKDVISWTTLM-TC-YSRNKRFGDVVTLFHEMVSRGLAP 271
D Y ++G +E + E+++ +D + W TL+ +C RN G+V + A
Sbjct: 353 DLYGRAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAG 412
Query: 272 DEVAMTTVISA 282
D V MT++ SA
Sbjct: 413 DYVLMTSIYSA 423
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 249 bits (635), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 201/338 (59%), Gaps = 1/338 (0%)
Query: 196 ARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFG 255
A++ + + +N ++ Y +SG + A +F+ M ++V++W +L++ S+ R
Sbjct: 260 AQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVH 319
Query: 256 DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLI 315
++ LF +M + +TT++ AC+ + AL GKE+H ++ + DV + +SL+
Sbjct: 320 EMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLM 379
Query: 316 DMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGV 375
DMY KCG ++ S VF + K+L WN M++ A +G +E + +F M G+ P+G+
Sbjct: 380 DMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGI 439
Query: 376 TFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRG 435
TFV++L+ C+ G E G S F M ++ +SP +EHY C+VD+L + G I++A+++I
Sbjct: 440 TFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIET 499
Query: 436 MTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEV 495
M F+P++ IWG+LL+ C+LH N+ + +A + L +LEP N G Y ++ N+YA+ W V
Sbjct: 500 MPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNV 559
Query: 496 SKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYH 533
KIR MK GV+K G SWV++ KI +F A Y
Sbjct: 560 DKIREMMKQRGVKKEA-GCSWVQVKDKIQIFVAGGGYE 596
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 120/315 (38%), Positives = 194/315 (61%), Gaps = 3/315 (0%)
Query: 217 YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAM 276
Y SG +E A +F MP ++V+SWT +++ +++ R + L+ +M P++
Sbjct: 165 YRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTF 224
Query: 277 TTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV 336
T ++SAC GALG G+ VH + G ++I +SLI MY KCG + + +F +
Sbjct: 225 TALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN 284
Query: 337 KNLFCWNSMIDGLATHGYAKEALKMFS-EMERKGIRPNGVTFVSVLTACTHAGFVEEGRS 395
K++ WNSMI G A HG A +A+++F M + G +P+ +T++ VL++C HAG V+EGR
Sbjct: 285 KDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGR- 343
Query: 396 RFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
+F +++ ++ + P + HY C+VDLL + GL+++ALE+I M +PNS IWG+LL C++H
Sbjct: 344 KFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVH 403
Query: 456 RNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSS 515
++ A + ++LEP + + L N+YA V WKE + +R MKD G+ KT PG S
Sbjct: 404 GDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGL-KTNPGCS 462
Query: 516 WVEINQKIHLFAASD 530
W+EIN + +F A D
Sbjct: 463 WIEINNYVFMFKAED 477
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 149/332 (44%), Gaps = 44/332 (13%)
Query: 103 RNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAG 162
R+G +Y SS V++C L D G H K GF + V++ ++LV Y G
Sbjct: 113 RDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVE 172
Query: 163 DARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM----PERNSATW-------- 210
+A KVF+EMPER+ +WT MIS + VD +L+ +M + N T+
Sbjct: 173 NAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACT 232
Query: 211 ---------------------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTT 243
N++I Y K G+++ A +F++ KDV+SW +
Sbjct: 233 GSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNS 292
Query: 244 LMTCYSRNKRFGDVVTLFHEMVSR-GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVN 302
++ Y+++ + LF M+ + G PD + V+S+C H G + G++ + + +
Sbjct: 293 MIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEH 352
Query: 303 GFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATHGYAKEALKM 361
G ++ S L+D+ + G + +L + + +K N W S++ HG ++
Sbjct: 353 GLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIR- 411
Query: 362 FSEMERKGIRPN-GVTFVSVLTACTHAGFVEE 392
+ ER + P+ T V + G+ +E
Sbjct: 412 -AAEERLMLEPDCAATHVQLANLYASVGYWKE 442
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 100/207 (48%), Gaps = 11/207 (5%)
Query: 268 GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRS 327
G + D +++ + +C G H + GF DVY+GSSL+ +Y G ++ +
Sbjct: 115 GWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENA 174
Query: 328 LLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHA 387
VF ++ +N+ W +MI G A LK++S+M + PN TF ++L+ACT +
Sbjct: 175 YKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGS 234
Query: 388 GFVEEGRSRFVSMIEDYCISPGIEHY----GCMVDLLSKGGLIEDALEMIRGMTFEPNSF 443
G + +GRS + + G++ Y ++ + K G ++DA + + +
Sbjct: 235 GALGQGRS-----VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFS-NKDVV 288
Query: 444 IWGALLSGCKLHRNLEIANVAVQNLMI 470
W ++++G H L + + + LM+
Sbjct: 289 SWNSMIAGYAQH-GLAMQAIELFELMM 314
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 132/326 (40%), Gaps = 41/326 (12%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F M N + + A++ R L Y KM ++ P Y+F++L+ ACT
Sbjct: 174 AYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTG 233
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
G++VH G +++ + +L+ Y G DA ++FD+ +D +W +M
Sbjct: 234 SGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSM 293
Query: 183 ISAHVRCGEVDSAARLFDEMPER-----NSATWNAMIDGYAKSGNIECAEILFNRMPCKD 237
I+ + + G A LF+ M + ++ T+ ++ +G ++ FN M
Sbjct: 294 IAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHG 353
Query: 238 VISWTTLMTCY-SRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLG-KEV 295
+ +C RFG + + + + P+ V +++ +C G + G +
Sbjct: 354 LKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAA 413
Query: 296 HHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYA 355
LM+ C + +Q+ NL+ A+ GY
Sbjct: 414 EERLMLE----------------PDCAAT--------HVQLANLY---------ASVGYW 440
Query: 356 KEALKMFSEMERKGIRPN-GVTFVSV 380
KEA + M+ KG++ N G +++ +
Sbjct: 441 KEAATVRKLMKDKGLKTNPGCSWIEI 466
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 248 bits (634), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 153/532 (28%), Positives = 253/532 (47%), Gaps = 47/532 (8%)
Query: 34 VYANMIKTNANQDSFLMNQFIAACTT---INLATHAFSHMDNPNALVYNALLRTCVHCHR 90
V+ ++++ +D ++ N +A + +A F M N + + +N ++
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGY 198
Query: 91 SHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTT 150
+ AL + M+ V + S++ C L D G+ VH V ++ + V+
Sbjct: 199 MNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNA 258
Query: 151 LVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP----ERN 206
LV Y G +AR VFD M RD WT MI+ + G+V++A L M N
Sbjct: 259 LVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPN 318
Query: 207 SAT----------------------W-------------NAMIDGYAKSGNIECAEILFN 231
+ T W ++I YAK ++ +F+
Sbjct: 319 AVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFS 378
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
W+ ++ +N+ D + LF M + P+ + +++ A A L L
Sbjct: 379 GASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQ 438
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ----VKNLFCWNSMID 347
+H YL GF + + L+ +Y+KCG+++ + +F +Q K++ W ++I
Sbjct: 439 AMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALIS 498
Query: 348 GLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCIS 407
G HG AL++F EM R G+ PN +TF S L AC+H+G VEEG + F M+E Y
Sbjct: 499 GYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTL 558
Query: 408 PGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQN 467
HY C+VDLL + G +++A +I + FEP S +WGALL+ C H N+++ +A
Sbjct: 559 ARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANK 618
Query: 468 LMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEI 519
L LEP N+G Y LL N+YA + RWK++ K+R M+++G+ K PG S +EI
Sbjct: 619 LFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKK-PGHSTIEI 669
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/445 (27%), Positives = 200/445 (44%), Gaps = 45/445 (10%)
Query: 55 AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGV--VPTSYS 112
A C I A F M + L YN ++R V H A++ +++M+ GV VP Y+
Sbjct: 60 ALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYT 119
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP 172
+ + KA L G VHG + + F +VQ L+ Y G AR VFD M
Sbjct: 120 YPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMK 179
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFD----EMPERNSATW------------------ 210
RD +W TMIS + R G ++ A +FD E + + AT
Sbjct: 180 NRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRN 239
Query: 211 -----------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKR 253
NA+++ Y K G ++ A +F+RM +DVI+WT ++ Y+ +
Sbjct: 240 VHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGD 299
Query: 254 FGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSS 313
+ + L M G+ P+ V + +++S C + GK +H + + D+ I +S
Sbjct: 300 VENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETS 359
Query: 314 LIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
LI MYAKC +D VF + W+++I G + +AL +F M R+ + PN
Sbjct: 360 LISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPN 419
Query: 374 GVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMI 433
T S+L A + + + + + +S ++ +V + SK G +E A ++
Sbjct: 420 IATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSS-LDAATGLVHVYSKCGTLESAHKIF 478
Query: 434 RGMTFEPNS---FIWGALLSGCKLH 455
G+ + S +WGAL+SG +H
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMH 503
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 153/333 (45%), Gaps = 44/333 (13%)
Query: 104 NGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRG-FDAHVFVQTTLVEFYSMLGLAG 162
N + + + SL+ + K +H HV G H+ +TL Y++ G
Sbjct: 9 NNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHIL--STLSVTYALCGHIT 66
Query: 163 DARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM--------PE---------- 204
ARK+F+EMP+ ++ +I +VR G A +F M P+
Sbjct: 67 YARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKA 126
Query: 205 -----------------------RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISW 241
R+ NA++ Y G +E A +F+ M +DVISW
Sbjct: 127 AGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISW 186
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
T+++ Y RN D + +F MV+ + D + +++ C HL L +G+ VH +
Sbjct: 187 NTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEE 246
Query: 302 NGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKM 361
G + + ++L++MY KCG +D + VF +++ +++ W MI+G G + AL++
Sbjct: 247 KRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALEL 306
Query: 362 FSEMERKGIRPNGVTFVSVLTACTHAGFVEEGR 394
M+ +G+RPN VT S+++ C A V +G+
Sbjct: 307 CRLMQFEGVRPNAVTIASLVSVCGDALKVNDGK 339
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 129/272 (47%), Gaps = 37/272 (13%)
Query: 217 YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGL--APDEV 274
YA G+I A LF MP ++S+ ++ Y R + D +++F MVS G+ PD
Sbjct: 59 YALCGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGY 118
Query: 275 AMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL 334
V A L ++ LG VH ++ + FG D Y+ ++L+ MY G ++ + VF +
Sbjct: 119 TYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM 178
Query: 335 QVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGR 394
+ +++ WN+MI G +GY +AL MF M + + + T VS+L C H +E GR
Sbjct: 179 KNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGR 238
Query: 395 SRFVSMIEDYCISPGIE-------------------------------HYGCMVDLLSKG 423
+ ++E+ + IE + CM++ ++
Sbjct: 239 NVH-KLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTED 297
Query: 424 GLIEDALEMIRGMTFE---PNSFIWGALLSGC 452
G +E+ALE+ R M FE PN+ +L+S C
Sbjct: 298 GDVENALELCRLMQFEGVRPNAVTIASLVSVC 329
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 161/572 (28%), Positives = 262/572 (45%), Gaps = 80/572 (13%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIA---ACTTINLATHAFSHMD-NPNALVYNALLRTCVH 87
E ++ + IKT + D ++N +A C I+ A + F M+ N + + ++L
Sbjct: 145 EQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQ 204
Query: 88 CHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
+ +A+ C+ + R G Y+F S++ AC + G VH + K GF +++V
Sbjct: 205 NGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYV 264
Query: 148 QTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNS 207
Q+ L++ Y+ AR + + M D +W +MI VR G + A +F M ER+
Sbjct: 265 QSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDM 324
Query: 208 ------------------------------------ATW----NAMIDGYAKSGNIECAE 227
AT+ NA++D YAK G ++ A
Sbjct: 325 KIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSAL 384
Query: 228 ILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLG 287
+F M KDVISWT L+T + N + + + LF M G+ PD++ +V+SA A L
Sbjct: 385 KVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELT 444
Query: 288 ALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMID 347
L G++VH + +GF + + +SL+ MY KCGS++ + ++F +++++L W +I
Sbjct: 445 LLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLI- 503
Query: 348 GLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCIS 407
GYAK G +E+ + F SM Y I+
Sbjct: 504 ----VGYAKN------------------------------GLLEDAQRYFDSMRTVYGIT 529
Query: 408 PGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQN 467
PG EHY CM+DL + G +++ M EP++ +W A+L+ + H N+E A +
Sbjct: 530 PGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKT 589
Query: 468 LMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFA 527
LM LEP+N+ Y L NMY+ R E + +R MK + K PG SWVE K+H F
Sbjct: 590 LMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKE-PGCSWVEEKGKVHSFM 648
Query: 528 ASDNYHTSYGHVNXXXXXXXXXXXXAGYVPEL 559
+ D H + AGY ++
Sbjct: 649 SEDRRHPRMVEIYSKVDEMMLLIKEAGYFADM 680
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 143/266 (53%), Gaps = 3/266 (1%)
Query: 188 RCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTC 247
+ G VD A ++FD+MPER+ TWN MI Y+ S + AE LF P K+ ISW L++
Sbjct: 40 KSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISG 99
Query: 248 YSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLD 307
Y ++ + LF EM S G+ P+E + +V+ C L L G+++H + + GF LD
Sbjct: 100 YCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLD 159
Query: 308 VYIGSSLIDMYAKCGSIDRSLLVFYKLQ-VKNLFCWNSMIDGLATHGYAKEALKMFSEME 366
V + + L+ MYA+C I + +F ++ KN W SM+ G + +G+A +A++ F ++
Sbjct: 160 VNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLR 219
Query: 367 RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLI 426
R+G + N TF SVLTAC G +++ I ++D+ +K +
Sbjct: 220 REGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS-GFKTNIYVQSALIDMYAKCREM 278
Query: 427 EDALEMIRGMTFEPNSFIWGALLSGC 452
E A ++ GM + + W +++ GC
Sbjct: 279 ESARALLEGMEVD-DVVSWNSMIVGC 303
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/458 (31%), Positives = 238/458 (51%), Gaps = 44/458 (9%)
Query: 119 ACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA 178
A + L G+ HG V K + + + +L+ YS G + VF M ERD +
Sbjct: 327 AVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVS 386
Query: 179 WTTMISAHVRCGEVDSAARLFDEMPERN------------SATWNA-------------- 212
W TMISA V+ G D L EM ++ SA N
Sbjct: 387 WNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLI 446
Query: 213 ------------MIDGYAKSGNIECAEILF--NRMPCKDVISWTTLMTCYSRNKRFGDVV 258
+ID Y+KSG I ++ LF + +D +W ++++ Y++N
Sbjct: 447 RQGIQFEGMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTF 506
Query: 259 TLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMY 318
+F +M+ + + P+ V + +++ AC+ +G++ LGK++H + + +V++ S+L+DMY
Sbjct: 507 LVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMY 566
Query: 319 AKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFV 378
+K G+I + +F + + +N + +MI G HG + A+ +F M+ GI+P+ +TFV
Sbjct: 567 SKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFV 626
Query: 379 SVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF 438
+VL+AC+++G ++EG F M E Y I P EHY C+ D+L + G + +A E ++G+
Sbjct: 627 AVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGE 686
Query: 439 EPN-SFIWGALLSGCKLHRNLEIANVAVQNLMILEPSN--SGYYSLLVNMYAEVNRWKEV 495
E N + +WG+LL CKLH LE+A + L + SGY LL NMYAE +WK V
Sbjct: 687 EGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSV 746
Query: 496 SKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYH 533
K+R M++ G++K G S +EI ++ F + D H
Sbjct: 747 DKVRRGMREKGLKKEV-GRSGIEIAGYVNCFVSRDQEH 783
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 204/442 (46%), Gaps = 53/442 (11%)
Query: 61 NLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPT--SYSFSSLVK 118
LA F + P +++N ++ + + H+AL Y +M + +Y++SS +K
Sbjct: 56 QLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLK 115
Query: 119 ACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGD------ARKVFDEMP 172
AC + AGK VH H+ + ++ V +L+ Y A D RKVFD M
Sbjct: 116 ACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMR 175
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFDEM------PE---------------------- 204
++ AW T+IS +V+ G A R F M P
Sbjct: 176 RKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANV 235
Query: 205 -------------RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRN 251
++ ++ I YA+ G+IE + +F+ +++ W T++ Y +N
Sbjct: 236 FYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN 295
Query: 252 KRFGDVVTLFHEMV-SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI 310
+ + LF E + S+ + DEV SA + L + LG++ H ++ N L + I
Sbjct: 296 DCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVI 355
Query: 311 GSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGI 370
+SL+ MY++CGS+ +S VF ++ +++ WN+MI +G E L + EM+++G
Sbjct: 356 VNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 415
Query: 371 RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL 430
+ + +T ++L+A ++ E G+ +I G+ Y ++D+ SK GLI +
Sbjct: 416 KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY--LIDMYSKSGLIRISQ 473
Query: 431 EMIRGMTF-EPNSFIWGALLSG 451
++ G + E + W +++SG
Sbjct: 474 KLFEGSGYAERDQATWNSMISG 495
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 122/280 (43%), Gaps = 42/280 (15%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSL 116
C +++ + F M + + +N ++ V + L +M + G + ++L
Sbjct: 366 CGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTAL 425
Query: 117 VKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDE--MPER 174
+ A + L + GK H + ++G + + L++ YS GL ++K+F+ ER
Sbjct: 426 LSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAER 484
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPERNSA-------------------------- 208
D W +MIS + + G + +F +M E+N
Sbjct: 485 DQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLH 544
Query: 209 -------------TWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFG 255
+A++D Y+K+G I+ AE +F++ ++ +++TT++ Y ++
Sbjct: 545 GFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGE 604
Query: 256 DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEV 295
++LF M G+ PD + V+SAC++ G + G ++
Sbjct: 605 RAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKI 644
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 4/160 (2%)
Query: 78 YNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVW 137
+N+++ + + + KML + P + + +S++ AC+ + GK +HG
Sbjct: 489 WNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSI 548
Query: 138 KRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAAR 197
++ D +VFV + LV+ YS G A +F + ER++ +TTMI + + G + A
Sbjct: 549 RQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAIS 608
Query: 198 LFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRM 233
LF M E ++ T+ A++ + SG I+ +F M
Sbjct: 609 LFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEM 648
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 12/177 (6%)
Query: 219 KSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAP----DEV 274
+ GN + A LF+ +P + W T++ + N + + + M + AP D
Sbjct: 51 QDGNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM--KKTAPFTNCDAY 108
Query: 275 AMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAK------CGSIDRSL 328
++ + ACA L GK VH +L+ + +SL++MY C D
Sbjct: 109 TYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 329 LVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACT 385
VF ++ KN+ WN++I G EA + F M R ++P+ V+FV+V A +
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVS 225
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 146/478 (30%), Positives = 239/478 (50%), Gaps = 42/478 (8%)
Query: 94 ALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVE 153
++ +V+M R V S L C L D + HG K G V V L++
Sbjct: 95 SMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMD 154
Query: 154 FYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAM 213
Y +CG V R+F+E+ E++ +W +
Sbjct: 155 MYG-------------------------------KCGLVSEVKRIFEELEEKSVVSWTVV 183
Query: 214 IDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSR-GLAPD 272
+D K +E +F+ MP ++ ++WT ++ Y +V+ L EMV R G +
Sbjct: 184 LDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLN 243
Query: 273 EVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL-------DVYIGSSLIDMYAKCGSID 325
V + +++SACA G L +G+ VH Y + + DV +G++L+DMYAKCG+ID
Sbjct: 244 FVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNID 303
Query: 326 RSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACT 385
S+ VF ++ +N+ WN++ GLA HG + + MF +M R+ ++P+ +TF +VL+AC+
Sbjct: 304 SSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACS 362
Query: 386 HAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIW 445
H+G V+EG F S+ Y + P ++HY CMVDLL + GLIE+A ++R M PN +
Sbjct: 363 HSGIVDEGWRCFHSL-RFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVL 421
Query: 446 GALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDL 505
G+LL C +H +EIA + L+ + P N+ Y L+ NMY R +R +++
Sbjct: 422 GSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKR 481
Query: 506 GVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELGSIL 563
G+ K PG S + +N +H F++ D H + AGYVP++ ++
Sbjct: 482 GIRKI-PGLSSIYVNDSVHRFSSGDRSHPRTKEIYLKLNEVIERIRSAGYVPDVSGLV 538
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 145/313 (46%), Gaps = 42/313 (13%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPC--KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRG 268
NA+ YA SG + A+ LF+ +P KD + WTTL++ +SR + + LF EM +
Sbjct: 47 NALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKR 106
Query: 269 LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG------ 322
+ D+V++ + CA L LG ++ H + G V + ++L+DMY KCG
Sbjct: 107 VEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVK 166
Query: 323 -------------------------SIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKE 357
++R VF+++ +N W M+ G G+ +E
Sbjct: 167 RIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTRE 226
Query: 358 ALKMFSEME-RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYG-- 414
L++ +EM R G N VT S+L+AC +G + GR V ++ + Y
Sbjct: 227 VLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDV 286
Query: 415 ----CMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH-RNLEIANVAVQNLM 469
+VD+ +K G I+ ++ + R M + N W AL SG +H + + ++ Q +
Sbjct: 287 MVGTALVDMYAKCGNIDSSMNVFRLMR-KRNVVTWNALFSGLAMHGKGRMVIDMFPQMIR 345
Query: 470 ILEPSNSGYYSLL 482
++P + + ++L
Sbjct: 346 EVKPDDLTFTAVL 358
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 133/333 (39%), Gaps = 64/333 (19%)
Query: 65 HAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKML-RNGVVPTSYSFSSLVKACTLL 123
F M NA+ + ++ + + + L +M+ R G + S++ AC
Sbjct: 198 EVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQS 257
Query: 124 MDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMI 183
+ G+ VH + K+ M+G +E D T ++
Sbjct: 258 GNLVVGRWVHVYALKKEM---------------MMG---------EEASYDDVMVGTALV 293
Query: 184 SAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTT 243
+ +CG +DS+ +F M +RN TWNA+ G A G RM
Sbjct: 294 DMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGK--------GRM---------- 335
Query: 244 LMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNG 303
V+ +F +M+ R + PD++ T V+SAC+H G + G H L G
Sbjct: 336 -------------VIDMFPQMI-REVKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYG 381
Query: 304 FGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV-KNLFCWNSMIDGLATHGYAKEALKMF 362
V + ++D+ + G I+ + ++ ++ V N S++ + HG + A ++
Sbjct: 382 LEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIK 441
Query: 363 SEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS 395
E+ + + P + +++ +V EGRS
Sbjct: 442 RELIQ--MSPGNTEYQILMSNM----YVAEGRS 468
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 151/489 (30%), Positives = 248/489 (50%), Gaps = 47/489 (9%)
Query: 120 CTLLMDSA------AGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE 173
C LL+ SA G +HG+V K G V L+ FYS L D+R+ F++ P+
Sbjct: 19 CDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQ 78
Query: 174 R--------------DAFAWTTM------------ISAHVRCGEVDSAARL--------- 198
+ + W ++ HV S A L
Sbjct: 79 KSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSV 138
Query: 199 ----FDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRF 254
+ + ++++D YAK G I A +F+ MP ++V++W+ +M Y++
Sbjct: 139 HCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGEN 198
Query: 255 GDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSL 314
+ + LF E + LA ++ + ++VIS CA+ L LG+++H + + F ++GSSL
Sbjct: 199 EEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSL 258
Query: 315 IDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNG 374
+ +Y+KCG + + VF ++ VKNL WN+M+ A H + ++ +++F M+ G++PN
Sbjct: 259 VSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNF 318
Query: 375 VTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIR 434
+TF++VL AC+HAG V+EGR F M E I P +HY +VD+L + G +++ALE+I
Sbjct: 319 ITFLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVIT 377
Query: 435 GMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKE 494
M +P +WGALL+ C +H+N E+A A + L P +SG + L N YA R+++
Sbjct: 378 NMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFED 437
Query: 495 VSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAG 554
+K R ++D G EK G SWVE K+H FAA + H + AG
Sbjct: 438 AAKARKLLRDRG-EKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAG 496
Query: 555 YVPELGSIL 563
Y+ + +L
Sbjct: 497 YIADTSYVL 505
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 127/293 (43%), Gaps = 40/293 (13%)
Query: 100 KMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLG 159
KM+ + P + S K+C +L G++VH K G+DA VFV ++LV+ Y+ G
Sbjct: 106 KMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCG 165
Query: 160 LAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWN-------- 211
ARK+FDEMP+R+ W+ M+ + + GE + A LF E N A +
Sbjct: 166 EIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVIS 225
Query: 212 -------------------------------AMIDGYAKSGNIECAEILFNRMPCKDVIS 240
+++ Y+K G E A +FN +P K++
Sbjct: 226 VCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGI 285
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
W ++ Y+++ V+ LF M G+ P+ + V++AC+H G + G+ +
Sbjct: 286 WNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMK 345
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL-FCWNSMIDGLATH 352
+ +SL+DM + G + +L V + + W +++ H
Sbjct: 346 ESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVH 398
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 14/262 (5%)
Query: 33 SVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHCH 89
SV+ +KT + D F+ + + A C I A F M N + ++ ++
Sbjct: 137 SVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMG 196
Query: 90 RSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQT 149
+ +AL + + L + YSFSS++ C G+ +HG K FD+ FV +
Sbjct: 197 ENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGS 256
Query: 150 TLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP----ER 205
+LV YS G+ A +VF+E+P ++ W M+ A+ + LF M +
Sbjct: 257 SLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKP 316
Query: 206 NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVIS----WTTLMTCYSRNKRFGDVVTLF 261
N T+ +++ + +G ++ F++M + + +L+ R R + + +
Sbjct: 317 NFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVI 376
Query: 262 HEMVSRGLAPDEVAMTTVISAC 283
M + P E ++++C
Sbjct: 377 TNM---PIDPTESVWGALLTSC 395
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/497 (30%), Positives = 250/497 (50%), Gaps = 45/497 (9%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F M PN + +N L+ V S +AL V+M R G+V ++ +KAC+
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVD-KGSPRALEFLVRMQREGLVLDGFALPCGLKACSF 250
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF--DEMPERDAFA-W 179
GK +H V K G ++ F + L++ YS G A VF +++ + A W
Sbjct: 251 GGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVW 310
Query: 180 TTMISAHVRCGEVDSAARL----------FDEMP-------------------------- 203
+M+S + E ++A L FD
Sbjct: 311 NSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVV 370
Query: 204 ---ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTL 260
E + + ++D +A GNI+ A LF+R+P KD+I+++ L+ ++ L
Sbjct: 371 SGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYL 430
Query: 261 FHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAK 320
F E++ GL D+ ++ ++ C+ L +LG GK++H + G+ + ++L+DMY K
Sbjct: 431 FRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVK 490
Query: 321 CGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSV 380
CG ID +++F + +++ W +I G +G +EA + F +M GI PN VTF+ +
Sbjct: 491 CGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGL 550
Query: 381 LTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEP 440
L+AC H+G +EE RS +M +Y + P +EHY C+VDLL + GL ++A E+I M EP
Sbjct: 551 LSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEP 610
Query: 441 NSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRI 500
+ IW +LL+ C H+N + V + L+ P + Y+ L N YA + W ++SK+R
Sbjct: 611 DKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVRE 670
Query: 501 AMKDLGVEKTCPGSSWV 517
A K LG +++ G SW+
Sbjct: 671 AAKKLGAKES--GMSWI 685
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 195/448 (43%), Gaps = 56/448 (12%)
Query: 20 IKRCSKREK-KTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDNPNA 75
++ C K + K ES+ A++IK +Q+ F+ N I+ L + A F M N
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 76 LVYNALLRTCVHCHRSHQALACYVKMLRNGV-VPTSYSFSSLVKACTLLMDSAAGKTVHG 134
+ + ++ + ++A+ Y +ML + + +S+++KAC L+ D G V+
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 135 HVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDS 194
+ K V + ++V+ Y G +A F E+ + +W T+IS + + G +D
Sbjct: 132 RIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDE 191
Query: 195 AARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRF 254
A LF MP+ N +WN +I G+ G+ E L
Sbjct: 192 AVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLV------------------------ 227
Query: 255 GDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSL 314
M GL D A+ + AC+ G L +GK++H ++ +G + S+L
Sbjct: 228 --------RMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISAL 279
Query: 315 IDMYAKCGSIDRSLLVFY--KLQVK-NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
IDMY+ CGS+ + VF+ KL V ++ WNSM+ G + + AL + ++ + +
Sbjct: 280 IDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLC 339
Query: 372 PNGVTFVSVLTACTHAGFVEEGRS----RFVSMIE-DYCISPGIEHYGCMVDLLSKGGLI 426
+ T L C + + G VS E DY + +VDL + G I
Sbjct: 340 FDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGS------ILVDLHANVGNI 393
Query: 427 EDALEMIRGMTFEPNSFI--WGALLSGC 452
+DA ++ + PN I + L+ GC
Sbjct: 394 QDAHKLFHRL---PNKDIIAFSGLIRGC 418
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 172/403 (42%), Gaps = 85/403 (21%)
Query: 38 MIKTNANQDSFLMNQFI---AACTTINLATHAFSHMD---NPNALVYNALLRTCVHCHRS 91
++K+ F ++ I + C ++ A F N + V+N++L + +
Sbjct: 264 VVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEEN 323
Query: 92 HQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTL 151
AL +++ ++ + SY+ S +K C ++ G VH V G++ V + L
Sbjct: 324 EAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSIL 383
Query: 152 VEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP-------- 203
V+ ++ +G DA K+F +P +D A++ +I V+ G A LF E+
Sbjct: 384 VDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQ 443
Query: 204 -------------------------------ERNSATWNAMIDGYAKSGNIECAEILFNR 232
E T A++D Y K G I+ +LF+
Sbjct: 444 FIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDG 503
Query: 233 MPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLG 292
M +DV+SWT ++ + +N R + FH+M++ G+ P++V ++SAC H G L
Sbjct: 504 MLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLL--- 560
Query: 293 KEVHHYL--MVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLA 350
+E L M + +GL+ Y+ ++ +C ++D L
Sbjct: 561 EEARSTLETMKSEYGLEPYL--------------------------EHYYC---VVDLLG 591
Query: 351 THGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC-TH--AGFV 390
G +EA ++ ++M + P+ + S+LTAC TH AG V
Sbjct: 592 QAGLFQEANELINKMP---LEPDKTIWTSLLTACGTHKNAGLV 631
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 141/326 (43%), Gaps = 52/326 (15%)
Query: 182 MISAHVR-CGEVDSAAR-------LFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRM 233
+I+A +R CG+V + R + + +N N +I Y + A +F+ M
Sbjct: 7 LIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEM 66
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV-SRGLAPDEVAMTTVISACAHLGALGLG 292
+++++WTT+++ Y+ + + + L+ M+ S A +E + V+ AC +G + LG
Sbjct: 67 SERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLG 126
Query: 293 KEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSI---------------------------- 324
V+ + DV + +S++DMY K G +
Sbjct: 127 ILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKA 186
Query: 325 ---DRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
D ++ +F+++ N+ WN +I G G + AL+ M+R+G+ +G L
Sbjct: 187 GLMDEAVTLFHRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGL 245
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEH----YGCMVDLLSKGGLIEDALEMIRGMT 437
AC+ G + G+ +++ G+E ++D+ S G + A ++
Sbjct: 246 KACSFGGLLTMGKQLHCCVVKS-----GLESSPFAISALIDMYSNCGSLIYAADVFHQEK 300
Query: 438 FEPNS--FIWGALLSGCKLHRNLEIA 461
NS +W ++LSG ++ E A
Sbjct: 301 LAVNSSVAVWNSMLSGFLINEENEAA 326
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 246 bits (628), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 154/482 (31%), Positives = 258/482 (53%), Gaps = 17/482 (3%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRN--GVVPTSYSFSSLVKAC 120
A F M N + + A++ +AL +++M ++ V P + SL AC
Sbjct: 250 AYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Query: 121 TLLMDS--AAGKTVHGHVWKRGF---DAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD 175
L G+ +H V G+ D + +LV Y+ GL A+ + +E D
Sbjct: 310 GGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNE--SFD 367
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEMPE-RNSATWNAMIDGYAKSGNIECAEILFNRMP 234
+ +I+ +++ G+++ A LF+ + + +W +MIDGY ++G++ A LF ++
Sbjct: 368 LQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLH 427
Query: 235 CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKE 294
KD ++WT +++ +N+ F + +L +MV GL P + ++S+ L GK
Sbjct: 428 DKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKH 487
Query: 295 VHHYLMVNG--FGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATH 352
+H + + D+ + +SL+ MYAKCG+I+ + +F K+ K+ WNSMI GL+ H
Sbjct: 488 IHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHH 547
Query: 353 GYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH 412
G A +AL +F EM G +PN VTF+ VL+AC+H+G + G F +M E Y I PGI+H
Sbjct: 548 GLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDH 607
Query: 413 YGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH---RNLE-IANVAVQNL 468
Y M+DLL + G +++A E I + F P+ ++GALL C L+ ++ E IA A L
Sbjct: 608 YISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRL 667
Query: 469 MILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAA 528
+ L+P N+ + L N+YA + R ++R M GV+KT PG SWV +N + ++F +
Sbjct: 668 LELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKT-PGCSWVVVNGRANVFLS 726
Query: 529 SD 530
D
Sbjct: 727 GD 728
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 111/458 (24%), Positives = 196/458 (42%), Gaps = 79/458 (17%)
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDS 126
F M N + NA+L V C R ++A + +M +N V T V L D
Sbjct: 100 FEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVVSWT-------VMLTALCDDG 152
Query: 127 AAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAH 186
+ V ++ + +V TLV G A++VFD MP RD +W MI +
Sbjct: 153 RSEDAVE--LFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGY 210
Query: 187 VRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMT 246
+ ++ A LF +M E+N TW +M+ GY + G++ A LF MP ++++SWT +++
Sbjct: 211 IENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMIS 270
Query: 247 CYSRNKRFGDVVTLFHEMVS--RGLAPDEVAMTTVISACAHLGA--LGLGKEVHHYLMVN 302
++ N+ + + + LF EM ++P+ + ++ AC LG LG+++H ++ N
Sbjct: 271 GFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISN 330
Query: 303 GFGL---DVYIGSSLIDMYA-----------------------------KCGSIDRSLLV 330
G+ D + SL+ MYA K G ++R+ +
Sbjct: 331 GWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETL 390
Query: 331 FYKLQ-VKNLFCWNSMIDGLATHGYAKEALKMF--------------------------- 362
F +++ + + W SMIDG G A +F
Sbjct: 391 FERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEA 450
Query: 363 ----SEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS-RFVSMIEDYCISPGIEHYGCMV 417
S+M R G++P T+ +L++ +++G+ V C P + +V
Sbjct: 451 ASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLV 510
Query: 418 DLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
+ +K G IEDA E+ M + ++ W +++ G H
Sbjct: 511 SMYAKCGAIEDAYEIFAKMV-QKDTVSWNSMIMGLSHH 547
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 160/337 (47%), Gaps = 52/337 (15%)
Query: 137 WKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA----WTTMISAHVRCGEV 192
++RGF + ++ S GL AR + D++P+R + WT+++S + + G +
Sbjct: 38 YRRGFSNE---EALILRRLSEGGLV-HARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYL 93
Query: 193 DSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
D A LF+ MPERN T NAM+ GY K + A LF MP K+V+SWT ++T +
Sbjct: 94 DEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLFREMP-KNVVSWTVMLTALCDDG 152
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL----------MVN 302
R D V LF EM R + V+ T+++ G + K+V + M+
Sbjct: 153 RSEDAVELFDEMPERNV----VSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIK 208
Query: 303 GF----GLD-------------VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSM 345
G+ G++ V +S++ Y + G + + +F ++ +N+ W +M
Sbjct: 209 GYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAM 268
Query: 346 IDGLATHGYAKEALKMFSEMER--KGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
I G A + +EAL +F EM++ + PNG T +S+ AC G E R R +
Sbjct: 269 ISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC--GGLGVEFR-RLGEQLHA 325
Query: 404 YCISPG---IEHYG----CMVDLLSKGGLIEDALEMI 433
IS G ++H G +V + + GLI A ++
Sbjct: 326 QVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLL 362
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 139/489 (28%), Positives = 243/489 (49%), Gaps = 41/489 (8%)
Query: 86 VHCHRSHQALACY-VKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
V C+R +A + + +R ++ +LV+AC L K V+G + GF+
Sbjct: 98 VLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPE 157
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE 204
++ ++ + G+ DAR++FDE+PER+ +++ ++IS V G A LF M E
Sbjct: 158 QYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWE 217
Query: 205 R---------------------------------------NSATWNAMIDGYAKSGNIEC 225
N+ +ID Y+K G+IE
Sbjct: 218 ELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIED 277
Query: 226 AEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAH 285
A F MP K ++W ++ Y+ + + + L ++M G++ D+ ++ +I
Sbjct: 278 ARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTK 337
Query: 286 LGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSM 345
L L L K+ H L+ NGF ++ ++L+D Y+K G +D + VF KL KN+ WN++
Sbjct: 338 LAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNAL 397
Query: 346 IDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYC 405
+ G A HG +A+K+F +M + PN VTF++VL+AC ++G E+G F+SM E +
Sbjct: 398 MGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHG 457
Query: 406 ISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAV 465
I P HY CM++LL + GL+++A+ IR + +W ALL+ C++ NLE+ V
Sbjct: 458 IKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVA 517
Query: 466 QNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHL 525
+ L + P G Y ++ NMY + + E + + ++ G+ P +WVE+ + H
Sbjct: 518 EKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLESKGL-SMMPACTWVEVGDQTHS 576
Query: 526 FAASDNYHT 534
F + D + +
Sbjct: 577 FLSGDRFDS 585
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 151/359 (42%), Gaps = 50/359 (13%)
Query: 22 RCSKREKKTLESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVY 78
RC KR VY M+ + ++MN+ + C I A F + N Y
Sbjct: 140 RCVKR-------VYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSY 192
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWK 138
+++ V+ +A + M +++F+ +++A L GK +H K
Sbjct: 193 YSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALK 252
Query: 139 RGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARL 198
G + FV L++ YS G DAR F+ MPE+ AW +I+ + G + A L
Sbjct: 253 LGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCL 312
Query: 199 FDEMPE----------------------------------RNS-----ATWNAMIDGYAK 219
+M + RN A++D Y+K
Sbjct: 313 LYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSK 372
Query: 220 SGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTV 279
G ++ A +F+++P K++ISW LM Y+ + R D V LF +M++ +AP+ V V
Sbjct: 373 WGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAV 432
Query: 280 ISACAHLGALGLGKEVHHYLM-VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK 337
+SACA+ G G E+ + V+G + +I++ + G +D ++ + +K
Sbjct: 433 LSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLK 491
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 167/548 (30%), Positives = 264/548 (48%), Gaps = 65/548 (11%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A + F M + + +N+++ CV C + A+ + +M VV S++++V C
Sbjct: 85 ALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERSVV----SWTAMVNGCF- 139
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQT----TLVEFYSMLGLAGDARKVFDEMPERDAFA 178
+GK +R F T ++V Y G DA K+F +MP ++ +
Sbjct: 140 ----RSGKVDQA---ERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVIS 192
Query: 179 WTTMI---SAHVRCGE------------VDSAARLFD-------EMP------------- 203
WTTMI + R GE + S +R F P
Sbjct: 193 WTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII 252
Query: 204 -------ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGD 256
E SA+ +I YA I + +F+ + V WT L++ YS NK+ D
Sbjct: 253 KLGFLYEEYVSAS---LITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHED 309
Query: 257 VVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLID 316
+++F M+ + P++ + +++C+ LG L GKE+H + G D ++G+SL+
Sbjct: 310 ALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVV 369
Query: 317 MYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVT 376
MY+ G+++ ++ VF K+ K++ WNS+I G A HG K A +F +M R P+ +T
Sbjct: 370 MYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEIT 429
Query: 377 FVSVLTACTHAGFVEEGRSRFVSMIEDYC-ISPGIEHYGCMVDLLSKGGLIEDALEMIRG 435
F +L+AC+H GF+E+GR F M I I+HY CMVD+L + G +++A E+I
Sbjct: 430 FTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIER 489
Query: 436 MTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEV 495
M +PN +W ALLS C++H +++ A + L+ +S Y LL N+YA RW V
Sbjct: 490 MVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNV 549
Query: 496 SKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGY 555
SK+R+ MK G+ K PGSSWV I K H F + D H S + GY
Sbjct: 550 SKLRVKMKKNGIMKK-PGSSWVVIRGKKHEFFSGDQPHCS--RIYEKLEFLREKLKELGY 606
Query: 556 VPELGSIL 563
P+ S L
Sbjct: 607 APDYRSAL 614
Score = 178 bits (452), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 186/376 (49%), Gaps = 43/376 (11%)
Query: 144 HVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP 203
HV + T ++ Y+ DA +FDEMP RD +W +MIS V CG++++A +LFDEMP
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 204 ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKD-------------------------- 237
ER+ +W AM++G +SG ++ AE LF +MP KD
Sbjct: 125 ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQ 184
Query: 238 -----VISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLG 292
VISWTT++ +N+R G+ + LF M+ + T VI+ACA+ A +G
Sbjct: 185 MPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMG 244
Query: 293 KEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATH 352
+VH ++ GF + Y+ +SLI YA C I S VF + + + W +++ G + +
Sbjct: 245 IQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLN 304
Query: 353 GYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH 412
++AL +FS M R I PN TF S L +C+ G ++ G+ + + G+E
Sbjct: 305 KKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKE-----MHGVAVKLGLET 359
Query: 413 YG----CMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNL 468
+V + S G + DA+ + + F+ + W +++ GC H + A V +
Sbjct: 360 DAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418
Query: 469 MIL--EPSNSGYYSLL 482
+ L EP + LL
Sbjct: 419 IRLNKEPDEITFTGLL 434
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 132/285 (46%), Gaps = 18/285 (6%)
Query: 181 TMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVIS 240
+I H+ +D A +F+++P + + + MI GY +S + A LF+ MP +DV+S
Sbjct: 40 VLICNHLLSRRIDEAREVFNQVPSPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVS 99
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
W ++++ V LF EM R + V+ T +++ C G + + + + +
Sbjct: 100 WNSMISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAERLFYQMP 155
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALK 360
V D +S++ Y + G +D +L +F ++ KN+ W +MI GL + + EAL
Sbjct: 156 VK----DTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALD 211
Query: 361 MFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGI--EHY--GCM 416
+F M R I+ F V+TAC +A G + I G E Y +
Sbjct: 212 LFKNMLRCCIKSTSRPFTCVITACANAPAFHMG-----IQVHGLIIKLGFLYEEYVSASL 266
Query: 417 VDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIA 461
+ + I D+ ++ E + +W ALLSG L++ E A
Sbjct: 267 ITFYANCKRIGDSRKVFDEKVHEQVA-VWTALLSGYSLNKKHEDA 310
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 104/241 (43%), Gaps = 13/241 (5%)
Query: 53 FIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYS 112
F A C I + F + V+ ALL + AL+ + MLRN ++P +
Sbjct: 269 FYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQST 328
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP 172
F+S + +C+ L GK +HG K G + FV +LV YS G DA VF ++
Sbjct: 329 FASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIF 388
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFDEM----PERNSATWNAMIDGYAKSGNIECAEI 228
++ +W ++I + G A +F +M E + T+ ++ + G +E
Sbjct: 389 KKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRK 448
Query: 229 LFNRMPC------KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA 282
LF M + + +T ++ R + + L MV + P+E+ ++SA
Sbjct: 449 LFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKPNEMVWLALLSA 505
Query: 283 C 283
C
Sbjct: 506 C 506
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/476 (29%), Positives = 253/476 (53%), Gaps = 6/476 (1%)
Query: 52 QFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSY 111
+F ++ A F M +P+ + +N+L+ V R + + ++++ R+ V P +
Sbjct: 98 RFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEF 157
Query: 112 SFSSLVKACTLLMDSAAGKTVHGHVWKRGFD-AHVFVQTTLVEFYSMLGLAGDARKVFDE 170
SF++ + AC L S G +H + K G + +V V L++ Y G DA VF
Sbjct: 158 SFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQH 217
Query: 171 MPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILF 230
M E+D +W ++++ R G+++ F +MP ++ T+N +ID + KSG+ A +
Sbjct: 218 MEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVL 277
Query: 231 NRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALG 290
+ MP + SW T++T Y +++ G+ F +M S G+ DE +++ V++A A L +
Sbjct: 278 SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVP 337
Query: 291 LGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLA 350
G +H G V + S+LIDMY+KCG + + L+F+ + KNL WN MI G A
Sbjct: 338 WGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYA 397
Query: 351 THGYAKEALKMFSEM-ERKGIRPNGVTFVSVLTACTHAGF-VEEGRSRFVSMIEDYCISP 408
+G + EA+K+F+++ + + ++P+ TF+++L C+H +E F MI +Y I P
Sbjct: 398 RNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKP 457
Query: 409 GIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNL 468
+EH ++ + + G + A ++I+ F + W ALL C ++L+ A +
Sbjct: 458 SVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKM 517
Query: 469 MILEPSNSGYYSLLV--NMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQK 522
+ L ++ Y +V N+YA RW+EV +IR M++ GV K GSSW++ K
Sbjct: 518 IELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEV-GSSWIDSRTK 572
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 153/412 (37%), Gaps = 111/412 (26%)
Query: 95 LACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEF 154
L V+++ +G P + L++ + + +HG+V K GF ++ + +L+ F
Sbjct: 40 LRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRF 99
Query: 155 YSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDE------------- 201
Y DA KVFDEMP+ D +W +++S +V+ G LF E
Sbjct: 100 YKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSF 159
Query: 202 ---------------------------MPERNSATWNAMIDGYAKSGNIECAEILFNRMP 234
+ + N N +ID Y K G ++ A ++F M
Sbjct: 160 TAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHME 219
Query: 235 CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKE 294
KD +SW ++ SRN + + FH+M + PD V
Sbjct: 220 EKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----PDTVTY------------------ 257
Query: 295 VHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGY 354
+ LID + K G + + V + N WN+++ G
Sbjct: 258 -----------------NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEK 300
Query: 355 AKEALKMFSEMERKGIRPNGVTFV---------------SVLTACTHAGFVEEGRSRFVS 399
+ EA + F++M G+R + + S++ AC H ++ SR V
Sbjct: 301 SGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLD---SRVVV 357
Query: 400 MIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
++D+ SK G+++ A M M N +W ++SG
Sbjct: 358 A-------------SALIDMYSKCGMLKHAELMFWTMP-RKNLIVWNEMISG 395
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 110/227 (48%), Gaps = 12/227 (5%)
Query: 240 SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
SW+T++ +R G V+ E+++ G PD + ++ + G + L +++H Y+
Sbjct: 23 SWSTIVPALARFGSIG-VLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYV 81
Query: 300 MVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEAL 359
+GF + + +SL+ Y S++ + VF ++ ++ WNS++ G G +E +
Sbjct: 82 TKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGI 141
Query: 360 KMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH-----YG 414
+F E+ R + PN +F + L AC G + I + G+E
Sbjct: 142 CLFLELHRSDVFPNEFSFTAALAACARLHLSPLG-----ACIHSKLVKLGLEKGNVVVGN 196
Query: 415 CMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIA 461
C++D+ K G ++DA+ + + M E ++ W A+++ C + LE+
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHME-EKDTVSWNAIVASCSRNGKLELG 242
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 145/511 (28%), Positives = 256/511 (50%), Gaps = 55/511 (10%)
Query: 49 LMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVP 108
LM+ + + C + +A F ++++ + + ++A++ + + +A++ + M+R + P
Sbjct: 341 LMSMY-SKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKP 399
Query: 109 TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF 168
+ + +S+++ C + S GK++H + K ++ + T ++ Y+ G A K F
Sbjct: 400 NAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAF 459
Query: 169 DEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------PE------------------ 204
+ +P +DA A+ + + + G+ + A ++ M P+
Sbjct: 460 ERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYA 519
Query: 205 RNSATW---------------NAMIDGYAKSGNIECAEILFNRMPC-KDVISWTTLMTCY 248
R S + +A+I+ + K + A +LF++ K +SW +M Y
Sbjct: 520 RGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGY 579
Query: 249 SRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDV 308
+ + + V F +M P+ V ++ A A L AL +G VH L+ GF
Sbjct: 580 LLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQT 639
Query: 309 YIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
+G+SL+DMYAKCG I+ S F ++ K + WN+M+ A HG A A+ +F M+
Sbjct: 640 PVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQEN 699
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIED 428
++P+ V+F+SVL+AC HAG VEEG+ F M E + I +EHY CMVDLL K GL +
Sbjct: 700 ELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGE 759
Query: 429 ALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAE 488
A+EM+R M + + +WGALL+ ++H NL ++N A+ L+ LEP N +YS + E
Sbjct: 760 AVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEPLNPSHYSQDRRL-GE 818
Query: 489 VNRWKEVSKIRIAMKDLGVEKTCPGSSWVEI 519
VN + K+ P SW+E+
Sbjct: 819 VNNVSRIKKV-------------PACSWIEV 836
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 113/402 (28%), Positives = 185/402 (46%), Gaps = 46/402 (11%)
Query: 51 NQFIAACTTI---NLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLR-NGV 106
NQ I A + +L+ F + +P +++N+++R +AL + M G+
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 107 VPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARK 166
P YSF+ +KAC MD G +H + + G ++ V++ T LVE Y AR+
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQ 156
Query: 167 VFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP---------------------ER 205
VFD+M +D W TM+S + G +A LF +M E+
Sbjct: 157 VFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEK 216
Query: 206 NS----------------ATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYS 249
+ A + +ID Y ++ AE +F + KD SW T+M Y+
Sbjct: 217 SDVCRCLHGLVIKKGFIFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYA 276
Query: 250 RNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVY 309
N F +V+ LF M + + ++VA + + A A++G L G +H Y + G DV
Sbjct: 277 HNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS 336
Query: 310 IGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG 369
+ +SL+ MY+KCG ++ + +F ++ +++ W++MI G EA+ +F +M R
Sbjct: 337 VATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH 396
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIE 411
I+PN VT SVL C G+S I Y I IE
Sbjct: 397 IKPNAVTLTSVLQGCAGVAASRLGKS-----IHCYAIKADIE 433
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/513 (22%), Positives = 221/513 (43%), Gaps = 50/513 (9%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F M + + +N ++ S AL + M V S +L+ A +
Sbjct: 154 ARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSK 213
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFV-QTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTT 181
L S + +HG V K+GF +F + L++ Y A VF+E+ +D +W T
Sbjct: 214 LEKSDVCRCLHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGT 270
Query: 182 MISAHVRCGEVDSAARLFDEMPERNS---------------------------------- 207
M++A+ G + LFD M +
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 208 -----ATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFH 262
+ +++ Y+K G +E AE LF + +DV+SW+ ++ Y + + + ++LF
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 263 EMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG 322
+M+ + P+ V +T+V+ CA + A LGK +H Y + ++ +++I MYAKCG
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCG 450
Query: 323 SIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLT 382
+L F +L +K+ +N++ G G A +A ++ M+ G+ P+ T V +L
Sbjct: 451 RFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQ 510
Query: 383 ACTHAGFVEEGRSRFVSMIE-DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPN 441
C G + +I+ + + H ++++ +K + A+ + FE +
Sbjct: 511 TCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKS 568
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMI--LEPSNSGYYSLLVNMYAEVNRWKEVSKIR 499
+ W +++G LH E A + + + +P N+ + +V AE++ + +
Sbjct: 569 TVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQP-NAVTFVNIVRAAAELSALRVGMSVH 627
Query: 500 IAMKDLGVEKTCP-GSSWVEINQKIHLFAASDN 531
++ G P G+S V++ K + +S+
Sbjct: 628 SSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEK 660
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/406 (25%), Positives = 183/406 (45%), Gaps = 56/406 (13%)
Query: 125 DSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMIS 184
D G +H + ++G V V T+L+ YS G A ++F + +RD +W+ MI+
Sbjct: 315 DLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIA 374
Query: 185 AHVRCGEVDSAARLFDEM------P---------------------------------ER 205
++ + G+ D A LF +M P E
Sbjct: 375 SYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIES 434
Query: 206 NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
T A+I YAK G A F R+P KD +++ L Y++ ++ M
Sbjct: 435 ELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMK 494
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
G+ PD M ++ CA G V+ ++ +GF + ++ +LI+M+ KC ++
Sbjct: 495 LHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALA 554
Query: 326 RSLLVFYKLQV-KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
++++F K K+ WN M++G HG A+EA+ F +M+ + +PN VTFV+++ A
Sbjct: 555 AAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAA 614
Query: 385 THAGFVEEGRSRFVSMIE-DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSF 443
+ G S S+I+ +C + + +VD+ +K G+IE + + ++ N +
Sbjct: 615 AELSALRVGMSVHSSLIQCGFCSQTPVGN--SLVDMYAKCGMIESSEKCFIEIS---NKY 669
Query: 444 I--WGALLSGCKLHRNLEIANVAVQNLMI-----LEPSNSGYYSLL 482
I W +LS H +A+ AV + L+P + + S+L
Sbjct: 670 IVSWNTMLSAYAAH---GLASCAVSLFLSMQENELKPDSVSFLSVL 712
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 141/487 (28%), Positives = 235/487 (48%), Gaps = 48/487 (9%)
Query: 66 AFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMD 125
+F + + + + +++ + ++ + +M G+ P S L+ +M
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMML 346
Query: 126 SAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER-DAFAWTTMIS 184
GK HG V + F V +L+ Y L A K+F + E + AW TM+
Sbjct: 347 VPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLK 406
Query: 185 A------HVRCGE-----------VDSAAR----------------------LFDEMPER 205
HV+C E +DSA+ + +
Sbjct: 407 GYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDL 466
Query: 206 NSATWNAMIDGYAKSGNIECAEILFNRMPCK---DVISWTTLMTCYSRNKRFGDVVTLFH 262
+ N++ID Y K G++ A RM C+ +VI+W ++ Y ++ + LF
Sbjct: 467 TISVVNSLIDLYGKMGDLTVAW----RMFCEADTNVITWNAMIASYVHCEQSEKAIALFD 522
Query: 263 EMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG 322
MVS P + + T++ AC + G+L G+ +H Y+ +++ + ++LIDMYAKCG
Sbjct: 523 RMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCG 582
Query: 323 SIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLT 382
+++S +F K+ CWN MI G HG + A+ +F +ME ++P G TF+++L+
Sbjct: 583 HLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLS 642
Query: 383 ACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNS 442
ACTHAG VE+G+ F+ M Y + P ++HY C+VDLLS+ G +E+A + M F P+
Sbjct: 643 ACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDG 701
Query: 443 FIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAM 502
IWG LLS C H E+ + + +P N GYY +L NMY+ +W+E + R M
Sbjct: 702 VIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMM 761
Query: 503 KDLGVEK 509
++ GV K
Sbjct: 762 RESGVGK 768
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/509 (24%), Positives = 232/509 (45%), Gaps = 51/509 (10%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFIAACTTI---NLATHAFSHMDNPNALVYNALLRTC 85
++L A +I +++ F+ ++ I++ + NL++ F + + ++N++++
Sbjct: 41 ESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAH 100
Query: 86 VHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRG-FDAH 144
++L + ML +G P ++ +V AC L+ G VHG V K G FD +
Sbjct: 101 FSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRN 160
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVD----------S 194
V + V FYS G DA VFDEMP+RD AWT +IS HV+ GE + S
Sbjct: 161 TAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHS 220
Query: 195 AARLFDEMPER--------------------------------NSATWNAMIDGYAKSGN 222
A D+ R + ++M Y+KSGN
Sbjct: 221 AGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGN 280
Query: 223 IECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA 282
A + F + +D+ SWT+++ +R+ + +F EM ++G+ PD V ++ +I+
Sbjct: 281 PSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINE 340
Query: 283 CAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK-NLFC 341
+ + GK H +++ + F LD + +SL+ MY K + + +F ++ + N
Sbjct: 341 LGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEA 400
Query: 342 WNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMI 401
WN+M+ G + +++F +++ GI + + SV+++C+H G V G+S ++
Sbjct: 401 WNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVV 460
Query: 402 EDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIA 461
+ + I ++DL K G + A M + N W A+++ +H
Sbjct: 461 KT-SLDLTISVVNSLIDLYGKMGDLTVAWRMF--CEADTNVITWNAMIAS-YVHCEQSEK 516
Query: 462 NVAVQNLMILEPSNSGYYSLLVNMYAEVN 490
+A+ + M+ E +L+ + A VN
Sbjct: 517 AIALFDRMVSENFKPSSITLVTLLMACVN 545
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 136/272 (50%), Gaps = 15/272 (5%)
Query: 32 ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
+S++ ++KT+ + ++N I + +A F D N + +NA++ + VHC
Sbjct: 453 KSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEADT-NVITWNAMIASYVHC 511
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
+S +A+A + +M+ P+S + +L+ AC G+ +H ++ + + ++ +
Sbjct: 512 EQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLS 571
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERN-- 206
L++ Y+ G +R++FD ++DA W MIS + G+V+SA LFD+M E +
Sbjct: 572 AALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVK 631
Query: 207 --SATWNAMIDGYAKSGNIECAEILFNRMPCKDVIS----WTTLMTCYSRNKRFGDVVTL 260
T+ A++ +G +E + LF +M DV ++ L+ SR+ G++
Sbjct: 632 PTGPTFLALLSACTHAGLVEQGKKLFLKMHQYDVKPNLKHYSCLVDLLSRS---GNLEEA 688
Query: 261 FHEMVSRGLAPDEVAMTTVISACAHLGALGLG 292
++S +PD V T++S+C G +G
Sbjct: 689 ESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMG 720
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 151/577 (26%), Positives = 267/577 (46%), Gaps = 83/577 (14%)
Query: 34 VYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPN---ALVYNALLRTCVHCHR 90
V+A+ I + S L+ + + + NL A S ++N + L +N L+ +
Sbjct: 65 VHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNEL 124
Query: 91 SHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTT 150
+ +A Y +M+ G+ P ++++ S++KAC +D A G+ VHG + + + ++V
Sbjct: 125 FEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNA 184
Query: 151 LVEF-------------------------------YSMLGLAGDARKVFDEM----PERD 175
L+ Y+ G+ +A ++FD+M E
Sbjct: 185 LISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVS 244
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEMPERNSAT-------------------------- 209
W + ++ G A L M RN T
Sbjct: 245 VITWNIISGGCLQTGNYVGALGLISRM--RNFPTSLDPVAMIIGLKACSLIGAIRLGKEI 302
Query: 210 ---------------WNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRF 254
N +I Y+K ++ A I+F + + +W ++++ Y++ +
Sbjct: 303 HGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKS 362
Query: 255 GDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNG-FGLDVYIGSS 313
+ L EM+ G P+ + + +++ CA + L GKE H Y++ F + +S
Sbjct: 363 EEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNS 422
Query: 314 LIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
L+D+YAK G I + V + ++ + S+IDG G AL +F EM R GI+P+
Sbjct: 423 LVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPD 482
Query: 374 GVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMI 433
VT V+VL+AC+H+ V EG F+ M +Y I P ++H+ CMVDL + G + A ++I
Sbjct: 483 HVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDII 542
Query: 434 RGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWK 493
M ++P+ W LL+ C +H N +I A + L+ ++P N GYY L+ NMYA W
Sbjct: 543 HNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWS 602
Query: 494 EVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASD 530
+++++R M+DLGV+K PG +W++ + LF+ D
Sbjct: 603 KLAEVRTIMRDLGVKKD-PGCAWIDTDSGFSLFSVGD 638
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 93/232 (40%), Gaps = 36/232 (15%)
Query: 277 TTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV 336
+++SAC + A G +VH + + +G + L+ Y+ + + + +
Sbjct: 47 ASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDI 106
Query: 337 KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSR 396
+ WN +I A + +E + + M KGIRP+ T+ SVL AC V GR
Sbjct: 107 LHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGR-- 164
Query: 397 FVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHR 456
++ ++E+ +++ + ++ AL+S K R
Sbjct: 165 ----------------------------VVHGSIEV---SSYKSSLYVCNALISMYKRFR 193
Query: 457 NLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVE 508
N+ IA + ++ ++ ++N YA W E ++ M GVE
Sbjct: 194 NMGIARRLFDRMF---ERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVE 242
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/449 (30%), Positives = 222/449 (49%), Gaps = 35/449 (7%)
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWK 138
N + + + QAL Y +LR G VP SY+F SL+ +GK HG K
Sbjct: 87 NPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIK 146
Query: 139 RGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARL 198
G D + VQ +L+ Y+ CG +D A +L
Sbjct: 147 HGCDQVLPVQNSLMHMYTC-------------------------------CGALDLAKKL 175
Query: 199 FDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVV 258
F E+P+R+ +WN++I G ++G++ A LF+ MP K++ISW +++ Y G +
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 259 TLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMY 318
+LF EMV G +E + +++AC L G+ VH L+ V I ++LIDMY
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMY 295
Query: 319 AKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFV 378
KC + + +F L ++N WN MI HG + L++F M +RP+ VTFV
Sbjct: 296 GKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFV 355
Query: 379 SVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF 438
VL C AG V +G+S + M++++ I P H CM +L S G E+A E ++ +
Sbjct: 356 GVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPD 415
Query: 439 E---PNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEV 495
E P S W LLS + N + ++L+ +P N YY LL+N+Y+ RW++V
Sbjct: 416 EDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDV 475
Query: 496 SKIRIAMKDLGVEKTCPGSSWVEINQKIH 524
+++R +K+ + + PG V++ + +H
Sbjct: 476 NRVREMVKERKIGRI-PGCGLVDLKEIVH 503
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 80/177 (45%), Gaps = 5/177 (2%)
Query: 62 LATHA-FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKAC 120
LA H F M + N + +N ++ + + +++ + +M+R G + L+ AC
Sbjct: 201 LAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNAC 260
Query: 121 TLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWT 180
G++VH + + ++ V + T L++ Y G AR++FD + R+ W
Sbjct: 261 GRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWN 320
Query: 181 TMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEILFNRM 233
MI AH G + LF+ M + T+ ++ G A++G + + ++ M
Sbjct: 321 VMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLM 377
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 243 bits (619), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 123/354 (34%), Positives = 196/354 (55%), Gaps = 5/354 (1%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVS-RGL 269
N +I+ K G A+ + ++VI+W ++ Y RN ++ + + M+S +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 270 APDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLL 329
P++ + + ++ACA LG L K VH ++ +G L+ + S+L+D+YAKCG I S
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 330 VFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGF 389
VFY ++ ++ WN+MI G ATHG A EA+++FSEME + + P+ +TF+ +LT C+H G
Sbjct: 222 VFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGL 281
Query: 390 VEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALL 449
+EEG+ F M + I P +EHYG MVDLL + G +++A E+I M EP+ IW +LL
Sbjct: 282 LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLL 341
Query: 450 SGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEK 509
S + ++N E+ +A+QN L + SG Y LL N+Y+ +W+ K+R M G+ K
Sbjct: 342 SSSRTYKNPELGEIAIQN---LSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRK 398
Query: 510 TCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELGSIL 563
G SW+E IH F A D H + G+V + +L
Sbjct: 399 A-KGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGFVSDTDLVL 451
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 105/265 (39%), Gaps = 47/265 (17%)
Query: 62 LATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLR-NGVVPTSYSFSSLVKAC 120
LA + + N + +N ++ V + +AL ML + P +SF+S + AC
Sbjct: 116 LAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAAC 175
Query: 121 TLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWT 180
L D K VH + G + + + + LV+ Y+ G G +R+VF + D W
Sbjct: 176 ARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWN 235
Query: 181 TMISAHVRCGEVDSAARLFDEMPERNSAT------------------------------- 209
MI+ G A R+F EM + +
Sbjct: 236 AMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRR 295
Query: 210 ---------WNAMIDGYAKSGNIECAEILFNRMPCK-DVISWTTLMTCYS--RNKRFGDV 257
+ AM+D ++G ++ A L MP + DV+ W +L++ +N G++
Sbjct: 296 FSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGEI 355
Query: 258 VTLFHEMVSRGLAPDEVAMTTVISA 282
+ +S+ + D V ++ + S+
Sbjct: 356 AI---QNLSKAKSGDYVLLSNIYSS 377
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 135/294 (45%), Gaps = 29/294 (9%)
Query: 78 YNALLRTCV----HCHRSHQA--LACYVKMLRNGVVPTSYSFSSLVK------ACTLLMD 125
Y +LL + V C+RS+ A L + L GV + SL+K A +L +
Sbjct: 64 YPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRN 123
Query: 126 SAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISA 185
++ + ++ G+ +V + L +ML D P + +FA + ++A
Sbjct: 124 ASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFT-------DIKPNKFSFA--SSLAA 174
Query: 186 HVRCGEVDSA----ARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISW 241
R G++ A + + D E N+ +A++D YAK G+I + +F + DV W
Sbjct: 175 CARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIW 234
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
++T ++ + + + +F EM + ++PD + +++ C+H G L GKE + LM
Sbjct: 235 NAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKE-YFGLMS 293
Query: 302 NGFGLDVYIG--SSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATH 352
F + + +++D+ + G + + + + ++ ++ W S++ T+
Sbjct: 294 RRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTY 347
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 135/428 (31%), Positives = 220/428 (51%), Gaps = 37/428 (8%)
Query: 93 QALACYVKMLRNGVVP-TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTL 151
QAL +++M + +P ++ FS +K+C G +VH H K F ++ FV L
Sbjct: 30 QALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNPFVGCAL 89
Query: 152 VEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWN 211
++ Y +C V A +LFDE+P+RN+ WN
Sbjct: 90 LDMYG-------------------------------KCLSVSHARKLFDEIPQRNAVVWN 118
Query: 212 AMIDGYAKSGNIECAEILF---NRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRG 268
AMI Y G ++ A L+ + MP + + + + + + + +M+
Sbjct: 119 AMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSY-RAIEFYRKMIEFR 177
Query: 269 LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSL 328
P+ + + ++SAC+ +GA L KE+H Y N + S L++ Y +CGSI
Sbjct: 178 FKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQ 237
Query: 329 LVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAG 388
LVF ++ +++ W+S+I A HG A+ ALK F EME + P+ + F++VL AC+HAG
Sbjct: 238 LVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAG 297
Query: 389 FVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGAL 448
+E F M DY + +HY C+VD+LS+ G E+A ++I+ M +P + WGAL
Sbjct: 298 LADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGAL 357
Query: 449 LSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVE 508
L C+ + +E+A +A + L+++EP N Y LL +Y V R +E ++R+ MK+ GV
Sbjct: 358 LGACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGV- 416
Query: 509 KTCPGSSW 516
K PGSSW
Sbjct: 417 KVSPGSSW 424
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 136/327 (41%), Gaps = 63/327 (19%)
Query: 20 IKRCSKREKKTLE-SVYANMIKTNANQDSFLMNQFIA--------ACTTINLATHAFSHM 70
+K C+ + L SV+A+ +K+N FL N F+ C +++ A F +
Sbjct: 55 LKSCAAAFRPVLGGSVHAHSVKSN-----FLSNPFVGCALLDMYGKCLSVSHARKLFDEI 109
Query: 71 DNPNALVYNALLRTCVHCHR---------------------------------SHQALAC 97
NA+V+NA++ HC + S++A+
Sbjct: 110 PQRNAVVWNAMISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEF 169
Query: 98 YVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSM 157
Y KM+ P + +LV AC+ + K +H + ++ + H +++ LVE Y
Sbjct: 170 YRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGR 229
Query: 158 LGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAM 213
G + VFD M +RD AW+++ISA+ G+ +SA + F EM + + +
Sbjct: 230 CGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNV 289
Query: 214 IDGYAKSGNIECAEILFNRM-------PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVS 266
+ + +G + A + F RM KD ++ L+ SR RF + + M
Sbjct: 290 LKACSHAGLADEALVYFKRMQGDYGLRASKD--HYSCLVDVLSRVGRFEEAYKVIQAMPE 347
Query: 267 RGLAPDEVAMTTVISACAHLGALGLGK 293
+ P ++ AC + G + L +
Sbjct: 348 K---PTAKTWGALLGACRNYGEIELAE 371
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 136/518 (26%), Positives = 254/518 (49%), Gaps = 41/518 (7%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSL 116
C + A F M+ + + +N ++ + L +M +G+ P +F +
Sbjct: 192 CDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGAS 251
Query: 117 VKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDA 176
+ + D G+ +H + K GFD + ++T L+ Y G + +V + +P +D
Sbjct: 252 LSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDV 311
Query: 177 FAWTTMISAHVRCGEVDSAARLFDEMPERNS----------------------------- 207
WT MIS +R G + A +F EM + S
Sbjct: 312 VCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGY 371
Query: 208 ----------ATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDV 257
N++I YAK G+++ + ++F RM +D++SW +++ Y++N
Sbjct: 372 VLRHGYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKA 431
Query: 258 VTLFHEMVSRGLAP-DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLID 316
+ LF EM + + D + +++ AC+ GAL +GK +H ++ + + ++L+D
Sbjct: 432 LLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVD 491
Query: 317 MYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVT 376
MY+KCG ++ + F + K++ W +I G HG AL+++SE G+ PN V
Sbjct: 492 MYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVI 551
Query: 377 FVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
F++VL++C+H G V++G F SM+ D+ + P EH C+VDLL + IEDA + +
Sbjct: 552 FLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFKFYKEN 611
Query: 437 TFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVS 496
P+ + G +L C+ + E+ ++ ++++ L+P ++G+Y L + +A + RW +VS
Sbjct: 612 FTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVS 671
Query: 497 KIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHT 534
+ M+ LG++K PG S +E+N K F + H+
Sbjct: 672 ESWNQMRSLGLKKL-PGWSKIEMNGKTTTFFMNHTSHS 708
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 195/404 (48%), Gaps = 47/404 (11%)
Query: 89 HRSH-QALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
H H Q L+ + ML N ++P +++F SL+KAC L + G ++H V GF + ++
Sbjct: 24 HGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYI 83
Query: 148 QTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER-- 205
++LV Y+ GL ARKVF+EM ERD WT MI + R G V A L +EM +
Sbjct: 84 SSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGI 143
Query: 206 ----------------------------------NSATWNAMIDGYAKSGNIECAEILFN 231
+ A N+M++ Y K ++ A+ LF+
Sbjct: 144 KPGPVTLLEMLSGVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFD 203
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
+M +D++SW T+++ Y+ +++ L + M GL PD+ +S + L +
Sbjct: 204 QMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEM 263
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
G+ +H ++ GF +D+++ ++LI MY KCG + S V + K++ CW MI GL
Sbjct: 264 GRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMR 323
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPG-- 409
G A++AL +FSEM + G + SV+ +C G + G S + Y + G
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGAS-----VHGYVLRHGYT 378
Query: 410 --IEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
++ + +K G ++ +L + M E + W A++SG
Sbjct: 379 LDTPALNSLITMYAKCGHLDKSLVIFERMN-ERDLVSWNAIISG 421
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 137/317 (43%), Gaps = 44/317 (13%)
Query: 34 VYANMIKTNANQDSFLMNQFIA---ACTTINLATHAFSHMDNPNALVYNALLRTCVHCHR 90
++ ++KT + D L I C + + N + + + ++ + R
Sbjct: 267 LHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGR 326
Query: 91 SHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTT 150
+ +AL + +ML++G +S + +S+V +C L G +VHG+V + G+ +
Sbjct: 327 AEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNS 386
Query: 151 LVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERN---- 206
L+ Y+ G + +F+ M ERD +W +IS + + ++ A LF+EM +
Sbjct: 387 LITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQV 446
Query: 207 ------------------------------------SATWNAMIDGYAKSGNIECAEILF 230
S A++D Y+K G +E A+ F
Sbjct: 447 DSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCF 506
Query: 231 NRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALG 290
+ + KDV+SW L+ Y + + + ++ E + G+ P+ V V+S+C+H G +
Sbjct: 507 DSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQ 566
Query: 291 LGKEVHHYLMVNGFGLD 307
G ++ MV FG++
Sbjct: 567 QGLKIFSS-MVRDFGVE 582
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 146/520 (28%), Positives = 252/520 (48%), Gaps = 49/520 (9%)
Query: 32 ESVYANMIKTNANQDSFLMN---QFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
SV+ K+ DS + N F + C + A F M + + + +N ++
Sbjct: 171 RSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQS 230
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
+A+ + M V + + +L+ A + + +H V K G + V
Sbjct: 231 GLQEEAITVFKNMFEKNVEISPVTIINLLSA------HVSHEPLHCLVVKCGMVNDISVV 284
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE---- 204
T+LV YS G A +++ + T+++S + G++D A F + +
Sbjct: 285 TSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMK 344
Query: 205 -----------------------------------RNSATWNAMIDGYAKSGNIECAEIL 229
+ N +I Y+K ++E L
Sbjct: 345 IDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFL 404
Query: 230 FNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM-VSRGLAPDEVAMTTVISACAHLGA 288
F ++ +ISW ++++ ++ R +FH+M ++ GL PD + + ++++ C+ L
Sbjct: 405 FEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCC 464
Query: 289 LGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDG 348
L LGKE+H Y + N F + ++ ++LIDMYAKCG+ ++ VF ++ WNSMI G
Sbjct: 465 LNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISG 524
Query: 349 LATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISP 408
+ G AL + EM KG++P+ +TF+ VL+AC H GFV+EG+ F +MI+++ ISP
Sbjct: 525 YSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISP 584
Query: 409 GIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNL 468
++HY MV LL + L +AL +I M +P+S +WGALLS C +HR LE+ + +
Sbjct: 585 TLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKM 644
Query: 469 MILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVE 508
+L+ N G Y L+ N+YA W +V ++R MKD G +
Sbjct: 645 FMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYD 684
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/483 (22%), Positives = 206/483 (42%), Gaps = 65/483 (13%)
Query: 28 KKTLESVYANMIKTNANQ----DSFLMNQFIA-ACTTINLATHAFSHMDNPNALVYNALL 82
K +E V ++ K+ ++ + L+N ++ C T A F M + +V+NAL+
Sbjct: 66 KLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTS--AQMLFDEMPERDTVVWNALI 123
Query: 83 RTCVHCHRSHQALAC-----YVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVW 137
C S C ++ ML+ G P++ + +L+ C + G++VHG
Sbjct: 124 -----CGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAA 178
Query: 138 KRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAAR 197
K G + V+ L+ FYS G A +F EM ++ +W TMI A+ + G + A
Sbjct: 179 KSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAIT 238
Query: 198 LFDEMPERNS---------------------------------ATWNAMIDGYAKSGNIE 224
+F M E+N + +++ Y++ G +
Sbjct: 239 VFKNMFEKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLV 298
Query: 225 CAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACA 284
AE L+ ++ T++++CY+ V F + + D VA+ ++ C
Sbjct: 299 SAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCK 358
Query: 285 HLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNS 344
+ +G +H Y + +G + + LI MY+K ++ L +F +LQ L WNS
Sbjct: 359 KSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNS 418
Query: 345 MIDGLATHGYAKEALKMFSEME-RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
+I G G A A ++F +M G+ P+ +T S+L C+ + G+ +
Sbjct: 419 VISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKE-----LHG 473
Query: 404 YCISPGI--EHYGC--MVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKL----H 455
Y + E++ C ++D+ +K G A + + + P + W +++SG L H
Sbjct: 474 YTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIK-APCTATWNSMISGYSLSGLQH 532
Query: 456 RNL 458
R L
Sbjct: 533 RAL 535
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 186/421 (44%), Gaps = 59/421 (14%)
Query: 78 YNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDS--AAGKTVHGH 135
+++LL++C+H S + + +LR+ + P ++ S ++A T +S + V H
Sbjct: 16 FHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTH 75
Query: 136 VWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCG-EVD- 193
+ K G D V+V+T+L+ Y G A+ +FDEMPERD W +I + R G E D
Sbjct: 76 LTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDA 135
Query: 194 --------------SAARLFDEMP-----------------------ERNSATWNAMIDG 216
SA L + +P E +S NA+I
Sbjct: 136 WKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISF 195
Query: 217 YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAM 276
Y+K + AE+LF M K +SW T++ YS++ + +T+F M + + V +
Sbjct: 196 YSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTI 255
Query: 277 TTVISACAHLGALGLGKEVHHYLMVN-GFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ 335
++SA + E H L+V G D+ + +SL+ Y++CG + + ++ +
Sbjct: 256 INLLSA-------HVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAK 308
Query: 336 VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRS 395
++ S++ A G A+ FS+ + ++ + V V +L C + ++ G S
Sbjct: 309 QDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMS 368
Query: 396 RFVSMIEDYCISPGIEHYGCMVD----LLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
+ Y I G+ +V+ + SK +E L + + P W +++SG
Sbjct: 369 -----LHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETP-LISWNSVISG 422
Query: 452 C 452
C
Sbjct: 423 C 423
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 115/247 (46%), Gaps = 25/247 (10%)
Query: 258 VTLFHEMVSRGLAPDEVAMTTVISACA-HLGALGLG-KEVHHYLMVNGFGLDVYIGSSLI 315
+T+F +++ L P+ M+ + A + L ++V +L +G VY+ +SL+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLL 92
Query: 316 DMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGV 375
++Y K G + + ++F ++ ++ WN++I G + +GY +A K+F M ++G P+
Sbjct: 93 NLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSAT 152
Query: 376 TFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH----YGCMVDLLSKGGLIEDALE 431
T V++L C GFV +GRS + G+E ++ SK + A
Sbjct: 153 TLVNLLPFCGQCGFVSQGRS-----VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEV 207
Query: 432 MIRGM----TFEPNSFIWGALLSGCK----------LHRNLEIANVAVQNLMILEPSNSG 477
+ R M T N+ I SG + +N+EI+ V + NL+ S+
Sbjct: 208 LFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEP 267
Query: 478 YYSLLVN 484
+ L+V
Sbjct: 268 LHCLVVK 274
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 239 bits (611), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 139/482 (28%), Positives = 250/482 (51%), Gaps = 31/482 (6%)
Query: 53 FIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYS 112
F A + A AFS M + + +NA+L + Q L +L + S +
Sbjct: 375 FYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVT 434
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP 172
SL+K C + K VHG+ K G + DE
Sbjct: 435 ILSLLKFCINVQGIGKVKEVHGYSVKAGL-------------------------LHDEEE 469
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNS-ATWNAMIDGYAKSGNIECAEILFN 231
+ A ++ A+ +CG V+ A ++F + ER + ++N+++ GY SG+ + A++LF
Sbjct: 470 PKLGNA---LLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFT 526
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
M D+ +W+ ++ Y+ + + + +F E+ +RG+ P+ V + ++ CA L +L L
Sbjct: 527 EMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHL 586
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
++ H Y++ G G D+ + +L+D+YAKCGS+ + VF ++L + +M+ G A
Sbjct: 587 VRQCHGYIIRGGLG-DIRLKGTLLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAV 645
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIE 411
HG KEAL ++S M I+P+ V ++LTAC HAG +++G + S+ + + P +E
Sbjct: 646 HGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTME 705
Query: 412 HYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMIL 471
Y C VDL+++GG ++DA + M EPN+ IWG LL C + +++ + +L+
Sbjct: 706 QYACAVDLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQA 765
Query: 472 EPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDN 531
E ++G + L+ NMYA +W+ V ++R MK ++K G SW+E++ + ++F + D
Sbjct: 766 ESDDTGNHVLISNMYAADAKWEGVMELRNLMKKKEMKKPA-GCSWLEVDGQRNVFVSGDC 824
Query: 532 YH 533
H
Sbjct: 825 SH 826
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 121/489 (24%), Positives = 216/489 (44%), Gaps = 65/489 (13%)
Query: 55 AACTTINLATHAFSHMDNPNALVYNALLR-TCVHCHRSHQALACYVKM-LRNGVVPTSYS 112
A C ++ F MD+ + +V+N +L V C R + + + M + P+S +
Sbjct: 67 AKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSCGR--ETMRFFKAMHFADEPKPSSVT 124
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLG-LAGDARKVFDEM 171
F+ ++ C L DS GK++H ++ K G + V LV Y+ G + DA FD +
Sbjct: 125 FAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGI 184
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLF----DEMPERNSAT------------------ 209
++D +W +I+ + A R F E E N AT
Sbjct: 185 ADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACR 244
Query: 210 -------------W--------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCY 248
W N+++ Y + G IE A LF RM KD++SW ++ Y
Sbjct: 245 SGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGY 304
Query: 249 SRNKRFGDVVTLFHEMVSRG-LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL- 306
+ N + LFH +V +G ++PD V + +++ CA L L GKE+H Y++ + + L
Sbjct: 305 ASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLE 364
Query: 307 DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEME 366
D +G++LI YA+ G + F + K++ WN+++D A + L + +
Sbjct: 365 DTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLL 424
Query: 367 RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHY-------GCMVDL 419
+ I + VT +S+L C + + + V + Y + G+ H ++D
Sbjct: 425 NEAITLDSVTILSLLKFCINVQGIGK-----VKEVHGYSVKAGLLHDEEEPKLGNALLDA 479
Query: 420 LSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYY 479
+K G +E A ++ G++ + +LLSG + N + A + ++ +
Sbjct: 480 YAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG---YVNSGSHDDAQMLFTEMSTTDLTTW 536
Query: 480 SLLVNMYAE 488
SL+V +YAE
Sbjct: 537 SLMVRIYAE 545
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 220/511 (43%), Gaps = 93/511 (18%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAACTTINL----ATHAFSHMDNPNALVYNALLRTCVH 87
+S+++ +IK +D+ + N ++ A AF + + + + +NA++
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 88 CHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAA---GKTVHGHVWKRGF-DA 143
+ A + ML+ P + ++++ C + + A G+ +H +V +R +
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQT 261
Query: 144 HVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLF---- 199
HVFV +LV FY +G +A +F M +D +W +I+ + E A +LF
Sbjct: 262 HVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLV 321
Query: 200 ---DEMPE----------------------------------RNSATWNAMIDGYAKSGN 222
D P+ +++ NA+I YA+ G+
Sbjct: 322 HKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGD 381
Query: 223 IECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA 282
A F+ M KD+ISW ++ ++ + + + L H +++ + D V + +++
Sbjct: 382 TSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKF 441
Query: 283 CAHLGALGLGKEVHHYLMVNGFGLD---VYIGSSLIDMYAKCGSIDRSLLVFYKL-QVKN 338
C ++ +G KEVH Y + G D +G++L+D YAKCG+++ + +F L + +
Sbjct: 442 CINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRT 501
Query: 339 LFCWNSMIDGLATHG--------------------------YAK-----EALKMFSEMER 367
L +NS++ G G YA+ EA+ +F E++
Sbjct: 502 LVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQA 561
Query: 368 KGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPG---IEHYGCMVDLLSKGG 424
+G+RPN VT +++L C + V Y I G I G ++D+ +K G
Sbjct: 562 RGMRPNTVTIMNLLPVCAQLASLH-----LVRQCHGYIIRGGLGDIRLKGTLLDVYAKCG 616
Query: 425 LIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
++ A + + + ++ A+++G +H
Sbjct: 617 SLKHAYSVFQSDA-RRDLVMFTAMVAGYAVH 646
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 104/273 (38%), Gaps = 63/273 (23%)
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP 172
F +VKAC + D +G+ +HG V+K G A V +++ Y+
Sbjct: 24 FLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYA---------------- 67
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNR 232
+C +D ++F +M + WN ++ G +
Sbjct: 68 ---------------KCRRMDDCQKMFRQMDSLDPVVWNIVLTGLS-------------- 98
Query: 233 MPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLG 292
++C RF + E P V V+ C LG G
Sbjct: 99 ------------VSCGRETMRFFKAMHFADEP-----KPSSVTFAIVLPLCVRLGDSYNG 141
Query: 293 KEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSI-DRSLLVFYKLQVKNLFCWNSMIDGLAT 351
K +H Y++ G D +G++L+ MYAK G I + F + K++ WN++I G +
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
+ +A + F M ++ PN T +VL C
Sbjct: 202 NNMMADAFRSFCLMLKEPTEPNYATIANVLPVC 234
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 14/220 (6%)
Query: 268 GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRS 327
G D V+ ACA + L G+ +H + G + S+++MYAKC +D
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 328 LLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEME-RKGIRPNGVTFVSVLTACTH 386
+F ++ + WN ++ GL+ +E ++ F M +P+ VTF VL C
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSV-SCGRETMRFFKAMHFADEPKPSSVTFAIVLPLCVR 134
Query: 387 AGFVEEGRSRFVSMIEDYCISPGIEHY----GCMVDLLSKGGLI-EDALEMIRGMTFEPN 441
G G+S + Y I G+E +V + +K G I DA G+ + +
Sbjct: 135 LGDSYNGKS-----MHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIA-DKD 188
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSL 481
W A+++G N+ LM+ EP+ Y ++
Sbjct: 189 VVSWNAIIAGFS-ENNMMADAFRSFCLMLKEPTEPNYATI 227
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 239 bits (609), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 149/520 (28%), Positives = 253/520 (48%), Gaps = 45/520 (8%)
Query: 55 AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKM-LRNGVVPTSYSF 113
A C + A AF + PN++ +NAL+ V A M ++ V + +F
Sbjct: 147 AKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTF 206
Query: 114 SSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP- 172
+ L+ M K VH V K G + + ++ Y+ G DA++VFD +
Sbjct: 207 APLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGG 266
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFDEMP----------------------------- 203
+D +W +MI+ + +SA LF +M
Sbjct: 267 SKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 204 ----------ERNSATWNAMIDGYAK--SGNIECAEILFNRMPCKDVISWTTLMTCYSRN 251
E+ ++ NA+I Y + +G +E A LF + KD+ISW +++T +++
Sbjct: 327 LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQK 386
Query: 252 KRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG 311
D V F + S + D+ A + ++ +C+ L L LG+++H +GF + ++
Sbjct: 387 GLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVI 446
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATHGYAKEALKMFSEMERKGI 370
SSLI MY+KCG I+ + F ++ K + WN+MI G A HG + +L +FS+M + +
Sbjct: 447 SSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNV 506
Query: 371 RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL 430
+ + VTF ++LTAC+H G ++EG M Y I P +EHY VDLL + GL+ A
Sbjct: 507 KLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAK 566
Query: 431 EMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVN 490
E+I M P+ + L C+ +E+A +L+ +EP + Y L +MY+++
Sbjct: 567 ELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLK 626
Query: 491 RWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASD 530
+W+E + ++ MK+ GV+K PG SW+EI ++ F A D
Sbjct: 627 KWEEKASVKKMMKERGVKKV-PGWSWIEIRNQVKAFNAED 665
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 219/483 (45%), Gaps = 65/483 (13%)
Query: 27 EKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDNPNALVYNALLR 83
+K +L YA IK + D ++ N+ + + +A F M +++ +N ++
Sbjct: 17 QKLSLTHCYA--IKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMIS 74
Query: 84 TCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDA 143
C + A + M R+G YSFS L+K + G+ VHG V K G++
Sbjct: 75 GYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYEC 134
Query: 144 HVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP 203
+V+V ++LV+ Y+ DA + F E+ E ++ +W +I+ V+ ++ +A L M
Sbjct: 135 NVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLME 194
Query: 204 ERNSATW----------------------------------------NAMIDGYAKSGNI 223
+ + T NAMI YA G++
Sbjct: 195 MKAAVTMDAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSV 254
Query: 224 ECAEILFNRM-PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA 282
A+ +F+ + KD+ISW +++ +S+++ LF +M + D T ++SA
Sbjct: 255 SDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSA 314
Query: 283 CAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAK--CGSIDRSLLVFYKLQVKNLF 340
C+ GK +H ++ G ++LI MY + G+++ +L +F L+ K+L
Sbjct: 315 CSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLI 374
Query: 341 CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEG------- 393
WNS+I G A G +++A+K FS + I+ + F ++L +C+ ++ G
Sbjct: 375 SWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALA 434
Query: 394 -RSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGC 452
+S FVS ++ IS I Y SK G+IE A + + ++ + ++ W A++ G
Sbjct: 435 TKSGFVS--NEFVISSLIVMY-------SKCGIIESARKCFQQISSKHSTVAWNAMILGY 485
Query: 453 KLH 455
H
Sbjct: 486 AQH 488
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 118/256 (46%), Gaps = 10/256 (3%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
N ++D Y K G + A +LF+ MP +D +SW T+++ Y+ + D LF M G
Sbjct: 39 NRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSD 98
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
D + + ++ A + LG++VH ++ G+ +VY+GSSL+DMYAKC ++ +
Sbjct: 99 VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEA 158
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK-GIRPNGVTFVSVLTACTHAGF 389
F ++ N WN++I G K A + ME K + + TF +LT F
Sbjct: 159 FKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMDAGTFAPLLTLLDDPMF 218
Query: 390 VEEGRSRFVSMIEDYCISPGIEHY----GCMVDLLSKGGLIEDALEMIRGMTFEPNSFIW 445
+ + + G++H M+ + G + DA + G+ + W
Sbjct: 219 C-----NLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISW 273
Query: 446 GALLSGCKLHRNLEIA 461
++++G H E A
Sbjct: 274 NSMIAGFSKHELKESA 289
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/311 (20%), Positives = 128/311 (41%), Gaps = 46/311 (14%)
Query: 31 LESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALV-YNALLRTCV 86
L+ V+A ++K + + N I A C +++ A F + L+ +N+++
Sbjct: 222 LKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFS 281
Query: 87 HCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVF 146
A +++M R+ V Y+++ L+ AC+ GK++HG V K+G +
Sbjct: 282 KHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTS 341
Query: 147 VQTTLVEFYSML--GLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE 204
L+ Y G DA +F+ + +D +W ++I+ + G + A + F +
Sbjct: 342 ATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSYLRS 401
Query: 205 ---------------------------------------RNSATWNAMIDGYAKSGNIEC 225
N +++I Y+K G IE
Sbjct: 402 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIES 461
Query: 226 AEILFNRMPCK-DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACA 284
A F ++ K ++W ++ Y+++ + LF +M ++ + D V T +++AC+
Sbjct: 462 ARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 521
Query: 285 HLGALGLGKEV 295
H G + G E+
Sbjct: 522 HTGLIQEGLEL 532
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 129/296 (43%), Gaps = 17/296 (5%)
Query: 20 IKRCSKREKKTL-ESVYANMIKTNANQDSFLMNQFIA-----ACTTINLATHAFSHMDNP 73
+ CS E + +S++ +IK Q + N I+ T+ A F + +
Sbjct: 312 LSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSK 371
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
+ + +N+++ S A+ + + + + Y+FS+L+++C+ L G+ +H
Sbjct: 372 DLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIH 431
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER-DAFAWTTMISAHVRCGEV 192
K GF ++ FV ++L+ YS G+ ARK F ++ + AW MI + + G
Sbjct: 432 ALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLG 491
Query: 193 DSAARLFDEMPERN----SATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCY 248
+ LF +M +N T+ A++ + +G I+ L N M + V M Y
Sbjct: 492 QVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLM--EPVYKIQPRMEHY 549
Query: 249 SRN----KRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
+ R G V + S L PD + + T + C G + + +V ++L+
Sbjct: 550 AAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMATQVANHLL 605
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 85/170 (50%), Gaps = 10/170 (5%)
Query: 296 HHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYA 355
H Y + G D+Y+ + ++D Y K G + + ++F ++ ++ WN+MI G + G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIE---H 412
++A +F+ M+R G +G +F +L G R + I G E +
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLK-----GIASVKRFDLGEQVHGLVIKGGYECNVY 137
Query: 413 YG-CMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIA 461
G +VD+ +K +EDA E + ++ EPNS W AL++G R+++ A
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEIS-EPNSVSWNALIAGFVQVRDIKTA 186
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 135/438 (30%), Positives = 230/438 (52%), Gaps = 48/438 (10%)
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP 172
F+SL++ C L G VH + ++ + + LV Y+ G A A +VFD M
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 173 ERDA--FAWTTMISAHVRCGEVDSAARLFDEM------PER------------------- 205
+RD+ FAW ++IS + G+ + A L+ +M P+R
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 206 --------------NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRN 251
+ NA++ YAK G+I A +F+ +P KD +SW +++T Y +
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 252 KRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG 311
+ + +F MV G+ PD+VA+++V+ A + + G+++H +++ G ++ +
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
++LI +Y+K G + ++ +F ++ ++ WN++I + H LK F +M R +
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAII---SAHSKNSNGLKYFEQMHRANAK 388
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALE 431
P+G+TFVSVL+ C + G VE+G F M ++Y I P +EHY CMV+L + G++E+A
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYS 448
Query: 432 MI-RGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVN 490
MI + M E +WGALL C LH N +I VA Q L LEP N + LL+ +Y++
Sbjct: 449 MIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAK 508
Query: 491 RWKEVSKIRIAMKDLGVE 508
R ++V ++R M D G+E
Sbjct: 509 RAEDVERVRQMMVDRGLE 526
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 108/209 (51%), Gaps = 13/209 (6%)
Query: 32 ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
E+++ +++K D +++N + A C I A + F + + + + +N++L +H
Sbjct: 215 EAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHH 274
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
H+AL + M++NG+ P + SS++ ++ G+ +HG V +RG + + V
Sbjct: 275 GLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVA 331
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSA 208
L+ YS G G A +FD+M ERD +W +ISAH + + + F++M N+
Sbjct: 332 NALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNS---NGLKYFEQMHRANAK 388
Query: 209 ----TWNAMIDGYAKSGNIECAEILFNRM 233
T+ +++ A +G +E E LF+ M
Sbjct: 389 PDGITFVSVLSLCANTGMVEDGERLFSLM 417
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 149/500 (29%), Positives = 240/500 (48%), Gaps = 57/500 (11%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
+++A F M + N V N LLR S + Y++M GV ++ +++
Sbjct: 163 VDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRG 222
Query: 120 CTLLMDSAAGKTVHGHVWKRGFD-AHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA 178
C+ GK +H V K G++ +++FV LV++YS G + + F+ +PE+D +
Sbjct: 223 CSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVIS 282
Query: 179 WTTMISAHVRCGEVDSAARLFDEMP------------------ERNSA------------ 208
W +++S G V + LF +M RNS
Sbjct: 283 WNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVL 342
Query: 209 ----------TWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVV 258
+A+ID Y K IE + +L+ +PC ++ +LMT D++
Sbjct: 343 KMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDII 402
Query: 259 TLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV------NGFGLDVYIGS 312
+F M+ G DEV ++TV+ A + L L + +H +V +G+ DV +
Sbjct: 403 EMFGLMIDEGTGIDEVTLSTVLKALS----LSLPESLHSCTLVHCCAIKSGYAADVAVSC 458
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRP 372
SLID Y K G + S VF +L N+FC S+I+G A +G + +KM EM+R + P
Sbjct: 459 SLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIP 518
Query: 373 NGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM 432
+ VT +SVL+ C+H+G VEEG F S+ Y ISPG + Y CMVDLL + GL+E A +
Sbjct: 519 DEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERL 578
Query: 433 IRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRW 492
+ + + W +LL C++HRN I A + LM LEP N Y + Y E+ +
Sbjct: 579 LLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDF 638
Query: 493 ------KEVSKIRIAMKDLG 506
+E++ R M+++G
Sbjct: 639 EISRQIREIAASRELMREIG 658
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 119/469 (25%), Positives = 205/469 (43%), Gaps = 82/469 (17%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A AF M + + YN L+ S +A+ Y +M+ G+ ++ +F S++ C+
Sbjct: 65 AHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSD 124
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
+ G VH V GF ++FV++ LV Y+ L L A K+FDEM +R+ +
Sbjct: 125 ELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLL 184
Query: 183 ISAHVRCGEVDSAARLFD-------EMPERNSATW------------------------- 210
+ + GE + RLF+ E +N T+
Sbjct: 185 LRCFCQTGE---SKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVK 241
Query: 211 -----------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVT 259
N ++D Y+ G++ + FN +P KDVISW ++++ + D +
Sbjct: 242 SGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLD 301
Query: 260 LFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL-DVYIGSSLIDMY 318
LF +M G P + ++ C+ + GK++H Y++ GF + +++ S+LIDMY
Sbjct: 302 LFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMY 361
Query: 319 AKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFV 378
KC I+ S L++ L NL C NS++ L G K+ ++MF M +G + VT
Sbjct: 362 GKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLS 421
Query: 379 SVLTA-----------CT--HAGFVEEGRSRFV----SMIEDYCIS-------------- 407
+VL A CT H ++ G + V S+I+ Y S
Sbjct: 422 TVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELD 481
Query: 408 -PGIEHYGCMVDLLSKGGLIEDALEMIRG---MTFEPNSFIWGALLSGC 452
P I +++ ++ G+ D ++M+R M P+ ++LSGC
Sbjct: 482 TPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGC 530
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 157/350 (44%), Gaps = 35/350 (10%)
Query: 196 ARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFG 255
+ +E P T N ID KSGN+ A F+ M +DV+++ L+ S N R+G
Sbjct: 35 SSFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLI---SGNSRYG 91
Query: 256 ---DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
+ L+ EMVS GL +V+S C+ G +VH ++ GFG ++++ S
Sbjct: 92 CSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRS 151
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRP 372
+L+ +YA +D +L +F ++ +NL N ++ G +K +++ ME +G+
Sbjct: 152 ALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAK 211
Query: 373 NGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM 432
NG+T+ ++ C+H V EG+ +++ I +VD S G + ++
Sbjct: 212 NGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRS 271
Query: 433 IRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLL--VNMYAEVN 490
+ E + W +++S C + Y S+L +++++++
Sbjct: 272 FNAVP-EKDVISWNSIVSVC-----------------------ADYGSVLDSLDLFSKMQ 307
Query: 491 RWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVN 540
W + IR M L C +S ++ ++IH + + S HV
Sbjct: 308 FWGKRPSIRPFMSFLNF---CSRNSDIQSGKQIHCYVLKMGFDVSSLHVQ 354
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/345 (20%), Positives = 147/345 (42%), Gaps = 44/345 (12%)
Query: 52 QFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSY 111
+ +AC ++ + +F+ + + + +N+++ C +L + KM G P+
Sbjct: 257 DYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIR 316
Query: 112 SFSSLVKACTLLMDSAAGKTVHGHVWKRGFD-AHVFVQTTLVEFYSMLGLAGDARKVFDE 170
F S + C+ D +GK +H +V K GFD + + VQ+ L++ Y ++ ++
Sbjct: 317 PFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQS 376
Query: 171 MPERDAFAWTTMISAHVRCGEVDSAARLF----DE-------------------MPER-- 205
+P + +++++ + CG +F DE +PE
Sbjct: 377 LPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLH 436
Query: 206 ----------------NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYS 249
+ A ++ID Y KSG E + +F+ + ++ T+++ Y+
Sbjct: 437 SCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYA 496
Query: 250 RNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVN-GFGLDV 308
RN D V + EM L PDEV + +V+S C+H G + G+ + L G
Sbjct: 497 RNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGR 556
Query: 309 YIGSSLIDMYAKCGSIDRS-LLVFYKLQVKNLFCWNSMIDGLATH 352
+ + ++D+ + G ++++ L+ + W+S++ H
Sbjct: 557 KLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIH 601
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/481 (29%), Positives = 236/481 (49%), Gaps = 45/481 (9%)
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
L D + V+G + K+ + L+ Y G +ARKVFDEMP+R W M
Sbjct: 7 LGDFPSAVAVYGRMRKKNY----MSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAM 62
Query: 183 ISAHVRCGEVDSAARLFDEM------PER-------------NSATWNAMIDGYA----- 218
I+ ++ + LF EM P+ S + I GY
Sbjct: 63 IAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGL 122
Query: 219 ---------------KSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHE 263
++G ++ EI+ MP +++++W TL+ ++N V+ L+
Sbjct: 123 ELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKM 182
Query: 264 MVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGS 323
M G P+++ TV+S+C+ L G G+++H + G V + SSLI MY+KCG
Sbjct: 183 MKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGC 242
Query: 324 IDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM-ERKGIRPNGVTFVSVLT 382
+ + F + + ++ W+SMI HG EA+++F+ M E+ + N V F+++L
Sbjct: 243 LGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 302
Query: 383 ACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNS 442
AC+H+G ++G F M+E Y PG++HY C+VDLL + G ++ A +IR M + +
Sbjct: 303 ACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDI 362
Query: 443 FIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAM 502
IW LLS C +H+N E+A + ++ ++P++S Y LL N++A RW++VS++R +M
Sbjct: 363 VIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSM 422
Query: 503 KDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELGSI 562
+D V+K G SW E ++H F D + + GY P+ S+
Sbjct: 423 RDKNVKKEA-GISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASV 481
Query: 563 L 563
L
Sbjct: 482 L 482
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 155/331 (46%), Gaps = 49/331 (14%)
Query: 155 YSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMI 214
YS LG A V+ M +++ + +I+ +VR G++ +A ++FDEMP+R TWNAMI
Sbjct: 4 YSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMI 63
Query: 215 DGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEV 274
G + FN + ++LF EM G +PDE
Sbjct: 64 AG--------LIQFEFNE-----------------------EGLSLFREMHGLGFSPDEY 92
Query: 275 AMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL 334
+ +V S A L ++ +G+++H Y + G LD+ + SSL MY + G + +V +
Sbjct: 93 TLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM 152
Query: 335 QVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGR 394
V+NL WN++I G A +G + L ++ M+ G RPN +TFV+VL++C+ +G+
Sbjct: 153 PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQ 212
Query: 395 SRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKL 454
I+ S + ++ + SK G + DA + E + +W +++S
Sbjct: 213 QIHAEAIK-IGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDE-DEVMWSSMISAYGF 270
Query: 455 H----------------RNLEIANVAVQNLM 469
H N+EI VA NL+
Sbjct: 271 HGQGDEAIELFNTMAEQTNMEINEVAFLNLL 301
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 170/398 (42%), Gaps = 48/398 (12%)
Query: 33 SVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSH 92
+VY M K N + L+N ++ A +N A F M + +NA++ + +
Sbjct: 15 AVYGRMRKKNYMSSNILINGYVRAGDLVN-ARKVFDEMPDRKLTTWNAMIAGLIQFEFNE 73
Query: 93 QALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLV 152
+ L+ + +M G P Y+ S+ L + G+ +HG+ K G + + V ++L
Sbjct: 74 EGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLA 133
Query: 153 EFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSA 208
Y G D V MP R+ AW T+I + + G ++ L+ M N
Sbjct: 134 HMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKI 193
Query: 209 TW-----------------------------------NAMIDGYAKSGNIECAEILFNRM 233
T+ +++I Y+K G + A F+
Sbjct: 194 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 253
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSR-GLAPDEVAMTTVISACAHLGALGLG 292
+D + W+++++ Y + + + + LF+ M + + +EVA ++ AC+H G G
Sbjct: 254 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 313
Query: 293 KEVHHYLMVNGFGLDVYIG--SSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGL 349
E+ +MV +G + + ++D+ + G +D++ + + +K ++ W +++
Sbjct: 314 LELFD-MMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSAC 372
Query: 350 ATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHA 387
H A+ A ++F E+ + I PN + VL A HA
Sbjct: 373 NIHKNAEMAQRVFKEILQ--IDPND-SACYVLLANVHA 407
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/549 (27%), Positives = 264/549 (48%), Gaps = 49/549 (8%)
Query: 17 LDQIKRCSKRE-KKTLESVYANMIK----TNANQDSFLMNQFIAACTTINLATHAFSHMD 71
L +K CS + KK L ++ N I +N L++ ++ + A F +
Sbjct: 16 LKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQ-GDVKHARKLFDRIS 74
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
+ + + A++ C AL + +M R V +++ S++K+C L G
Sbjct: 75 KRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQ 134
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGE 191
+HG V K ++ V++ L+ Y+ G +AR FD M ERD +W MI +
Sbjct: 135 IHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANAC 194
Query: 192 VDSAARLFDEM------PE---------------------------------RNSATWNA 212
D++ LF M P+ R+SA +
Sbjct: 195 ADTSFSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRS 254
Query: 213 MIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSR-NKRFGDVVTLFHEMVSRGLAP 271
+++ Y K G++ A L +D++S T L+T +S+ N D +F +M+
Sbjct: 255 LVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKM 314
Query: 272 DEVAMTTVISACAHLGALGLGKEVHHY-LMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
DEV +++++ C + ++ +G+++H + L + DV +G+SLIDMYAK G I+ ++L
Sbjct: 315 DEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLA 374
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
F +++ K++ W S+I G HG ++A+ +++ ME + I+PN VTF+S+L+AC+H G
Sbjct: 375 FEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQT 434
Query: 391 EEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM--TFEPNSFIWGAL 448
E G + +MI + I EH C++D+L++ G +E+A +IR +S WGA
Sbjct: 435 ELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAF 494
Query: 449 LSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVE 508
L C+ H N++++ VA L+ +EP Y L ++YA W R MK+ G
Sbjct: 495 LDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSC 554
Query: 509 KTCPGSSWV 517
PG S V
Sbjct: 555 NKAPGYSLV 563
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 148/528 (28%), Positives = 254/528 (48%), Gaps = 44/528 (8%)
Query: 32 ESVYANMIKTNANQDSFLMNQ---FIAACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
+ +++ + K+ +D + Q F A + A F + ++N+++R
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
H+ L+ + ++LR+ P +++++ L + + D+ + +HG G
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICG 144
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNS- 207
+ +V+ YS GL +A K+F +P+ D W MI + CG D LF+ M R
Sbjct: 145 SAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQ 204
Query: 208 --------------------ATWN------------------AMIDGYAKSGNIECAEIL 229
W+ A+++ Y++ I A +
Sbjct: 205 PNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSV 264
Query: 230 FNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGAL 289
FN + D+++ ++L+T YSR + + LF E+ G PD V + V+ +CA L
Sbjct: 265 FNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDS 324
Query: 290 GLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGL 349
GKEVH Y++ G LD+ + S+LIDMY+KCG + ++ +F + KN+ +NS+I GL
Sbjct: 325 VSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGL 384
Query: 350 ATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPG 409
HG+A A + F+E+ G+ P+ +TF ++L C H+G + +G+ F M ++ I P
Sbjct: 385 GLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQ 444
Query: 410 IEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLM 469
EHY MV L+ G +E+A E + + +S I GALLS C++H N +A V +N+
Sbjct: 445 TEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEVVAENIH 504
Query: 470 I-LEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSW 516
E S Y +L N+YA RW EV ++R + + K PG SW
Sbjct: 505 KNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKL-PGISW 551
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/471 (29%), Positives = 239/471 (50%), Gaps = 45/471 (9%)
Query: 90 RSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQT 149
+ ++L + KML + PT +F S++ +C+ +A G VHG K G++ + V
Sbjct: 271 KRDESLLVFRKMLEASLRPTDLTFVSVMGSCSC---AAMGHQVHGLAIKTGYEKYTLVSN 327
Query: 150 TLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------P 203
+ YS G A KVF+ + E+D W TMIS++ + SA ++ M P
Sbjct: 328 ATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKP 387
Query: 204 ERNS------------------------------ATWNAMIDGYAKSGNIECAEILFNRM 233
+ + NA+I Y+K+G IE A++LF R
Sbjct: 388 DEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERS 447
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRG--LAPDEVAMTTVISACAHLGALGL 291
K++ISW +++ + N + + F ++ + PD ++T++S C +L L
Sbjct: 448 LRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLML 507
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
G + H Y++ +G + IG++LI+MY++CG+I SL VF ++ K++ WNS+I +
Sbjct: 508 GSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSR 567
Query: 352 HGYAKEALKMFSEMERKG-IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGI 410
HG + A+ + M+ +G + P+ TF +VL+AC+HAG VEEG F SM+E + + +
Sbjct: 568 HGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNV 627
Query: 411 EHYGCMVDLLSKGGLIEDALEMIR--GMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNL 468
+H+ C+VDLL + G +++A +++ T +W AL S C H +L++ + + L
Sbjct: 628 DHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLL 687
Query: 469 MILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEI 519
M E + Y L N+YA WKE + R A+ +G K G SW+ +
Sbjct: 688 MEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQ-RGCSWMRL 737
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/285 (32%), Positives = 144/285 (50%), Gaps = 38/285 (13%)
Query: 108 PTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKV 167
P YS S + L D+ G VH + + G H V TL+ Y LG +K
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 168 FDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNS-ATWNAMIDGYAKSGNIECA 226
FDE+ E D ++WTT++SA + G+++ A +FD+MPER+ A WNAMI G +SG E +
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETS 174
Query: 227 EILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
V LF EM G+ D+ T++S C +
Sbjct: 175 -------------------------------VELFREMHKLGVRHDKFGFATILSMCDY- 202
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYK--LQVKNLFCWNS 344
G+L GK+VH ++ GF + + ++LI MY C + + LVF + + V++ +N
Sbjct: 203 GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNV 262
Query: 345 MIDGLATHGYAK-EALKMFSEMERKGIRPNGVTFVSVLTACTHAG 388
+IDGLA G+ + E+L +F +M +RP +TFVSV+ +C+ A
Sbjct: 263 VIDGLA--GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA 305
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 202/355 (56%), Gaps = 13/355 (3%)
Query: 213 MIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPD 272
++D Y+K+G++ A LF+ MP +DV SW L+ R + + L+ M + G+
Sbjct: 150 LLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRS 209
Query: 273 EVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLD-VYIGSSLIDMYAKCGSIDRSLLVF 331
EV + + AC+HLG + G+ + H G+ D V + ++ IDMY+KCG +D++ VF
Sbjct: 210 EVTVVAALGACSHLGDVKEGENIFH-----GYSNDNVIVSNAAIDMYSKCGFVDKAYQVF 264
Query: 332 YKLQ-VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
+ K++ WN+MI G A HG A AL++F ++E GI+P+ V++++ LTAC HAG V
Sbjct: 265 EQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLV 324
Query: 391 EEGRSRFVSMIEDYC--ISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGAL 448
E G S F +M C + ++HYGC+VDLLS+ G + +A ++I M+ P+ +W +L
Sbjct: 325 EYGLSVFNNMA---CKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSL 381
Query: 449 LSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVE 508
L +++ ++E+A +A + + + +N G + LL N+YA RWK+V ++R M+ V+
Sbjct: 382 LGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVK 441
Query: 509 KTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPELGSIL 563
K PG S++E IH F SD H + + GYV + G +L
Sbjct: 442 KI-PGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGYVAQTGLVL 495
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 135/297 (45%), Gaps = 36/297 (12%)
Query: 190 GEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYS 249
G++ A ++F +P+ + WNA+I G+A S + A SW M
Sbjct: 51 GDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLA------------FSWYRSML--- 95
Query: 250 RNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVY 309
+ + R D + + + ACA ++H + G D
Sbjct: 96 -------QQSSSSSAICR---VDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSL 145
Query: 310 IGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG 369
+ ++L+D Y+K G + + +F ++ V+++ WN++I GL + A EA++++ ME +G
Sbjct: 146 LCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEG 205
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDA 429
IR + VT V+ L AC+H G V+EG + F D I +D+ SK G ++ A
Sbjct: 206 IRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVS-----NAAIDMYSKCGFVDKA 260
Query: 430 LEMIRGMTFEPNSFIWGALLSGCKL----HRNLEIANVAVQNLMILEPSNSGYYSLL 482
++ T + + W +++G + HR LEI + N ++P + Y + L
Sbjct: 261 YQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNG--IKPDDVSYLAAL 315
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 177/431 (41%), Gaps = 54/431 (12%)
Query: 45 QDSFLMNQFIAACTT-----INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYV 99
Q SFL ++ + C ++ A F ++ P +NA++R A + Y
Sbjct: 33 QSSFLRSRLLERCAISPFGDLSFAVQIFRYIPKPLTNDWNAIIRGFAGSSHPSLAFSWYR 92
Query: 100 KMLRNGVVPTS------YSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVE 153
ML+ ++ + S +KAC + S+A +H + +RG A + TTL++
Sbjct: 93 SMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLD 152
Query: 154 FYSMLGLAGDARKVFDEMPERDAFAWTTMISAHV-------------------------- 187
YS G A K+FDEMP RD +W +I+ V
Sbjct: 153 AYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVT 212
Query: 188 ---------RCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPC-KD 237
G+V +F N NA ID Y+K G ++ A +F + K
Sbjct: 213 VVAALGACSHLGDVKEGENIFHGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKS 272
Query: 238 VISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHH 297
V++W T++T ++ + + +F ++ G+ PD+V+ ++AC H G + G V +
Sbjct: 273 VVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFN 332
Query: 298 YLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ-VKNLFCWNSMIDGLATHGYAK 356
+ G ++ ++D+ ++ G + + + + + + W S++ + +
Sbjct: 333 NMACKGVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVE 392
Query: 357 EALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCM 416
A E++ G+ +G FV + + +GR + V + D S ++ +
Sbjct: 393 MAEIASREIKEMGVNNDG-DFVLLSNV-----YAAQGRWKDVGRVRDDMESKQVKKIPGL 446
Query: 417 VDLLSKGGLIE 427
+ +KG + E
Sbjct: 447 SYIEAKGTIHE 457
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 139/446 (31%), Positives = 221/446 (49%), Gaps = 65/446 (14%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P A ++N ++R+ + A+ Y+ M+R+ V+P YS ++KA V
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKA-----------AV 128
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEV 192
H + G + H S VR G V
Sbjct: 129 QIHDFTLGKELH---------------------------------------SVAVRLGFV 149
Query: 193 DSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
DE E + I Y K+G E A +F+ P + + SW ++ +
Sbjct: 150 G------DEFCE------SGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAG 197
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV--NGFGLDVYI 310
R + V +F +M GL PD+ M +V ++C LG L L ++H ++ D+ +
Sbjct: 198 RANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMM 257
Query: 311 GSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGI 370
+SLIDMY KCG +D + +F +++ +N+ W+SMI G A +G EAL+ F +M G+
Sbjct: 258 LNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGV 317
Query: 371 RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL 430
RPN +TFV VL+AC H G VEEG++ F M ++ + PG+ HYGC+VDLLS+ G +++A
Sbjct: 318 RPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAK 377
Query: 431 EMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVN 490
+++ M +PN +WG L+ GC+ ++E+A ++ LEP N G Y +L N+YA
Sbjct: 378 KVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRG 437
Query: 491 RWKEVSKIRIAMKDLGVEKTCPGSSW 516
WK+V ++R MK V K P S+
Sbjct: 438 MWKDVERVRKLMKTKKVAKI-PAYSY 462
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 228 bits (581), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 148/548 (27%), Positives = 240/548 (43%), Gaps = 41/548 (7%)
Query: 55 AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFS 114
A C + A F M + + N + + + +ML +G + + +
Sbjct: 101 AKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRMLGSGGFDHA-TLT 159
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
++ C K +H G+D + V L+ Y G + R VFD M R
Sbjct: 160 IVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHR 219
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPE----RNSATW-------------------- 210
+ T +IS + + RLF M NS T+
Sbjct: 220 NVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIH 279
Query: 211 ---------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFG 255
+A++D Y+K G+IE A +F D +S T ++ ++N
Sbjct: 280 ALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEE 339
Query: 256 DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLI 315
+ + F M+ G+ D ++ V+ +LGLGK++H ++ F + ++ + LI
Sbjct: 340 EAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLI 399
Query: 316 DMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGV 375
+MY+KCG + S VF ++ +N WNSMI A HG+ ALK++ EM ++P V
Sbjct: 400 NMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDV 459
Query: 376 TFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRG 435
TF+S+L AC+H G +++GR M E + I P EHY C++D+L + GL+++A I
Sbjct: 460 TFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSFIDS 519
Query: 436 MTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEV 495
+ +P+ IW ALL C H + E+ A + L P +S + L+ N+Y+ +WKE
Sbjct: 520 LPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIANIYSSRGKWKER 579
Query: 496 SKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGY 555
+K MK +GV K G S +EI K H F D H + GY
Sbjct: 580 AKTIKRMKAMGVTKET-GISSIEIEHKTHSFVVEDKLHPQAEAIYDVLSGLFPVMVDEGY 638
Query: 556 VPELGSIL 563
P+ IL
Sbjct: 639 RPDKRFIL 646
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 118/234 (50%), Gaps = 3/234 (1%)
Query: 205 RNS-ATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHE 263
RN+ WN+++ YAK G + A LF+ MP +DVIS + + RN+ L
Sbjct: 87 RNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKR 146
Query: 264 MVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGS 323
M+ G D +T V+S C + K +H +++G+ ++ +G+ LI Y KCG
Sbjct: 147 MLGSG-GFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGC 205
Query: 324 IDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTA 383
VF + +N+ ++I GL + ++ L++FS M R + PN VT++S L A
Sbjct: 206 SVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAA 265
Query: 384 CTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT 437
C+ + + EG+ + +++ Y I + ++D+ SK G IEDA + T
Sbjct: 266 CSGSQRIVEGQ-QIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTT 318
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 5/192 (2%)
Query: 46 DSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNG 105
+S LM+ + + C +I A F + + +L +A+ +++ML+ G
Sbjct: 294 ESALMDMY-SKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAG 352
Query: 106 VVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDAR 165
V + S+++ + GK +H V KR F + FV L+ YS G D++
Sbjct: 353 VEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQ 412
Query: 166 KVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSG 221
VF MP+R+ +W +MI+A R G +A +L++EM + T+ +++ + G
Sbjct: 413 TVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVG 472
Query: 222 NIECAEILFNRM 233
I+ L N M
Sbjct: 473 LIDKGRELLNEM 484
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 157/578 (27%), Positives = 271/578 (46%), Gaps = 61/578 (10%)
Query: 2 LNFQHCKIHTLKDK-----ILDQIKRCSKREKKTL--ESVYANMIKTNANQDSFLMNQFI 54
L KIH+L + IK C+ +++ L ++ +K A+ D+ + N I
Sbjct: 30 LRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLI 89
Query: 55 AACTTIN---LATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSY 111
+ + F M + + + Y +++ +C ++A+ +M G +P S
Sbjct: 90 SMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSE 149
Query: 112 SFSSLVKACTLLMDSA-AGKTVHGHVW-KRGFDAHVFVQTTLVEFYSMLGLAGDARKVFD 169
+SL+ CT + S+ + H V V + T LV+ Y A VFD
Sbjct: 150 LVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFD 209
Query: 170 EMPERDAFAWTTMISAHVR--------------------------------CGEVDSAAR 197
+M ++ +WT MIS V C E++ +
Sbjct: 210 QMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGSS 269
Query: 198 LFDEM-----------PERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMT 246
L E+ ER +A + M Y + GN+ + +LF +DV+ W+++++
Sbjct: 270 LVKEIHGFSFRHGCHADERLTAAFMTM---YCRCGNVSLSRVLFETSKVRDVVMWSSMIS 326
Query: 247 CYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL 306
Y+ +V+ L ++M G+ + V + ++SAC + L VH ++ GF
Sbjct: 327 GYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMS 386
Query: 307 DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEME 366
+ +G++LIDMYAKCGS+ + VFY+L K+L W+SMI+ HG+ EAL++F M
Sbjct: 387 HILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMI 446
Query: 367 RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLI 426
+ G + + F+++L+AC HAG VEE ++ F + Y + +EHY C ++LL + G I
Sbjct: 447 KGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVTLEHYACYINLLGRFGKI 505
Query: 427 EDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQN-LMILEPSNSGYYSLLVNM 485
+DA E+ M +P++ IW +LLS C+ H L++A + N LM EP N Y LL +
Sbjct: 506 DDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKI 565
Query: 486 YAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKI 523
+ E + ++R M+ + K C G S +E +I
Sbjct: 566 HTESGNYHAAEEVRRVMQRRKLNK-CYGFSKIEPELQI 602
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 151/543 (27%), Positives = 266/543 (48%), Gaps = 47/543 (8%)
Query: 36 ANMIKTNANQDSFLMNQFIAACT---TINLATHAFSHMDNPNALVYNALLRTCVHCHR-S 91
+ ++KT D + N FI + + A F M + + +N+LL
Sbjct: 198 STVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFG 257
Query: 92 HQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTL 151
+A+ + M+R GV SF+S++ C D + +HG KRG+++ + V L
Sbjct: 258 FEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNIL 317
Query: 152 VEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAH---------------VRCGEVD--- 193
+ YS G+ + VF +M ER+ +WTTMIS++ V EV
Sbjct: 318 MSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTFVG 377
Query: 194 --SAARLFDEMPE--------------RNSATWNAMIDGYAKSGNIECAEILFNRMPCKD 237
+A + +++ E + N+ I YAK +E A+ F + ++
Sbjct: 378 LINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE 437
Query: 238 VISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL--GKEV 295
+ISW +++ +++N + + +F + + P+E +V++A A + + G+
Sbjct: 438 IISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAEDISVKQGQRC 496
Query: 296 HHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYA 355
H +L+ G + S+L+DMYAK G+ID S VF ++ KN F W S+I ++HG
Sbjct: 497 HAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDF 556
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGC 415
+ + +F +M ++ + P+ VTF+SVLTAC G V++G F MIE Y + P EHY C
Sbjct: 557 ETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSC 616
Query: 416 MVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSN 475
MVD+L + G +++A E++ + P + ++L C+LH N+++ + M ++P
Sbjct: 617 MVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPEL 676
Query: 476 SGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQ-----KIHLFAASD 530
SG Y + N+YAE W + ++IR AM+ V K G SW+++ + F++ D
Sbjct: 677 SGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEA-GFSWIDVGDTEGSLTMQGFSSGD 735
Query: 531 NYH 533
H
Sbjct: 736 KSH 738
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 123/248 (49%), Gaps = 14/248 (5%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
NA++ Y K+G + A +F + DV+SW T+++ + N+ + V M S G+
Sbjct: 115 NAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQIALNFVV---RMKSAGVV 171
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
D +T +S C LG ++ ++ G D+ +G+S I MY++ GS + V
Sbjct: 172 FDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRV 231
Query: 331 FYKLQVKNLFCWNSMIDGLATHG-YAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGF 389
F ++ K++ WNS++ GL+ G + EA+ +F +M R+G+ + V+F SV+T C H
Sbjct: 232 FDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCH--- 288
Query: 390 VEEGRSRFVSMIEDYCISPGIEHYGCMVDLL----SKGGLIEDALEMIRGMTFEPNSFIW 445
E + I CI G E + ++L SK G++E + M+ E N W
Sbjct: 289 --ETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMS-ERNVVSW 345
Query: 446 GALLSGCK 453
++S K
Sbjct: 346 TTMISSNK 353
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 137/295 (46%), Gaps = 23/295 (7%)
Query: 22 RCSKREKKTLESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVY 78
+C+++ K+ L+ ++ IKT + + N FI A + A AF + + +
Sbjct: 383 KCNEQIKEGLK-IHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISW 441
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAA--GKTVHGHV 136
NA++ SH+AL ++ +P Y+F S++ A D + G+ H H+
Sbjct: 442 NAMISGFAQNGFSHEALKMFLSAAAE-TMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHL 500
Query: 137 WKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAA 196
K G ++ V + L++ Y+ G ++ KVF+EM +++ F WT++ISA+ G+ ++
Sbjct: 501 LKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVM 560
Query: 197 RLFDEMPERNSA----TWNAMIDGYAKSGNIECAEILFNRM-------PCKDVISWTTLM 245
LF +M + N A T+ +++ + G ++ +FN M P + ++ ++
Sbjct: 561 NLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHE--HYSCMV 618
Query: 246 TCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
R R + L E+ P E + +++ +C G + +G +V M
Sbjct: 619 DMLGRAGRLKEAEELMSEVPG---GPGESMLQSMLGSCRLHGNVKMGAKVAELAM 670
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 108/262 (41%), Gaps = 44/262 (16%)
Query: 195 AARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRF 254
A +LFD +RN+ T S N +E L P + ++ + N +
Sbjct: 27 AHKLFDGSSQRNATT----------SINHSISESLRRNSPAR-------ALSIFKENLQL 69
Query: 255 GDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSL 314
G G DEV + + AC G L G ++H + +GF V + +++
Sbjct: 70 GYF----------GRHMDEVTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAV 117
Query: 315 IDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNG 374
+ MY K G D +L +F L ++ WN+++ G + + AL M+ G+ +
Sbjct: 118 MGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDN---QIALNFVVRMKSAGVVFDA 174
Query: 375 VTFVSVLTACTHA-GFVEEGRSRFVSMIEDYCISPGIEHY----GCMVDLLSKGGLIEDA 429
T+ + L+ C + GF+ ++ + G+E + + S+ G A
Sbjct: 175 FTYSTALSFCVGSEGFL------LGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGA 228
Query: 430 LEMIRGMTFEPNSFIWGALLSG 451
+ M+F+ + W +LLSG
Sbjct: 229 RRVFDEMSFK-DMISWNSLLSG 249
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/317 (34%), Positives = 175/317 (55%), Gaps = 1/317 (0%)
Query: 217 YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAM 276
YA SG+++ A ILF + +D+I W +++ Y + + + ++++M + PD+
Sbjct: 153 YALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTF 212
Query: 277 TTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV 336
+V AC+ L L GK H ++ ++ + S+L+DMY KC S VF +L
Sbjct: 213 ASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLST 272
Query: 337 KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSR 396
+N+ W S+I G HG E LK F +M+ +G RPN VTF+ VLTAC H G V++G
Sbjct: 273 RNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEH 332
Query: 397 FVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHR 456
F SM DY I P +HY MVD L + G +++A E + + + +WG+LL C++H
Sbjct: 333 FYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Query: 457 NLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSW 516
N+++ +A + L+P+N G Y + N YA + SK+R M++ GV+K PG S
Sbjct: 393 NVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKD-PGYSQ 451
Query: 517 VEINQKIHLFAASDNYH 533
+E+ ++H F D H
Sbjct: 452 IELQGEVHRFMKDDTSH 468
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
S GL + ++ C GK +H + V GF L+ Y+ L+ +YA G +
Sbjct: 101 SSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQ 160
Query: 326 RSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACT 385
+ ++F L++++L WN+MI G G +E L ++ +M + I P+ TF SV AC+
Sbjct: 161 TAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACS 220
Query: 386 HAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIW 445
+E G+ MI+ CI I +VD+ K D + ++ N W
Sbjct: 221 ALDRLEHGKRAHAVMIKR-CIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVITW 278
Query: 446 GALLSGCKLH 455
+L+SG H
Sbjct: 279 TSLISGYGYH 288
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 149/371 (40%), Gaps = 54/371 (14%)
Query: 35 YANMIKTNANQDSFLMNQFIAACTTI---NLATHAFSHMDNPNALVYNALLRT----CVH 87
Y +T A+Q S + F TTI LA N L +T CV
Sbjct: 30 YTREFQTEASQTSASGSMFSGNATTILRRMLAEKRIGRFQVENQRKTEKLDKTLKGLCV- 88
Query: 88 CHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
R +A+ + +G+ +++ L++ C + GK +H ++ GF + ++
Sbjct: 89 TGRLKEAVGL---LWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYL 145
Query: 148 QTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM----- 202
+ L+ Y++ G A +F + RD W MIS +V+ G ++ +M
Sbjct: 146 KVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRI 205
Query: 203 -PER---------------------------------NSATWNAMIDGYAKSGNIECAEI 228
P++ N +A++D Y K +
Sbjct: 206 VPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHR 265
Query: 229 LFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA 288
+F+++ ++VI+WT+L++ Y + + +V+ F +M G P+ V V++AC H G
Sbjct: 266 VFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGL 325
Query: 289 LGLGKEVHHYLMVNGFGLDVYIG--SSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSM 345
+ G E H Y M +G++ ++++D + G + + K K + W S+
Sbjct: 326 VDKGWE-HFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSL 384
Query: 346 IDGLATHGYAK 356
+ HG K
Sbjct: 385 LGACRIHGNVK 395
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 91/189 (48%), Gaps = 4/189 (2%)
Query: 20 IKRCSKREKKTL-ESVYANMIKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNA 75
++ C +R++ T + ++A M + +L + + A + A F + +
Sbjct: 115 LQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDL 174
Query: 76 LVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGH 135
+ +NA++ V + L Y M +N +VP Y+F+S+ +AC+ L GK H
Sbjct: 175 IPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAV 234
Query: 136 VWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSA 195
+ KR +++ V + LV+ Y D +VFD++ R+ WT++IS + G+V
Sbjct: 235 MIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEV 294
Query: 196 ARLFDEMPE 204
+ F++M E
Sbjct: 295 LKCFEKMKE 303
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 222 bits (565), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 144/494 (29%), Positives = 241/494 (48%), Gaps = 38/494 (7%)
Query: 46 DSFLMNQFIAA-CTTINLATHAFSHMDNP---NALVYNALLRTCVHCHRSHQALACYVKM 101
DS N IAA C ++ NP + + +N L+ +AL V M
Sbjct: 192 DSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSM 251
Query: 102 LRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLA 161
NG+ +SF +++ + L GK VH V K G ++ FV + +V+ Y G
Sbjct: 252 EENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNM 311
Query: 162 GDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSG 221
A SAH+ G F + +S MI GY+ G
Sbjct: 312 KYAE------------------SAHLLYG--------FGNLYSASS-----MIVGYSSQG 340
Query: 222 NIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGL-APDEVAMTTVI 280
+ A+ LF+ + K+++ WT + Y ++ V+ L ++ PD + M +V+
Sbjct: 341 KMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVL 400
Query: 281 SACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLF 340
AC+ + GKE+H + + G +D + ++ +DMY+KCG+++ + +F ++
Sbjct: 401 GACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTV 460
Query: 341 CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSM 400
+N+MI G A HG+ ++ + F +M G +P+ +TF+++L+AC H G V EG F SM
Sbjct: 461 MYNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSM 520
Query: 401 IEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM-TFEPNSFIWGALLSGCKLHRNLE 459
IE Y ISP HY CM+DL K ++ A+E++ G+ E ++ I GA L+ C ++N E
Sbjct: 521 IEAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTE 580
Query: 460 IANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEI 519
+ + L+++E SN Y + N YA RW E+ +IR M+ +E G SW I
Sbjct: 581 LVKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELE-IFSGCSWANI 639
Query: 520 NQKIHLFAASDNYH 533
+++ H+F +SD H
Sbjct: 640 DKQFHMFTSSDISH 653
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 200/470 (42%), Gaps = 88/470 (18%)
Query: 33 SVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNA----LVYNALLRTCVHC 88
+V+ M++ N + N IAA N A ++ N + YN LL
Sbjct: 44 NVFDEMLERNV----YSWNAVIAAYVKFNNVKEARELFESDNCERDLITYNTLLSGFAKT 99
Query: 89 HR-SHQALACYVKMLR---NGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
+A+ + +M R + + ++ +++VK L + G+ +HG + K G D
Sbjct: 100 DGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGT 159
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDE--MPERDAFAWTTMISAHVRCGEVDSAARLFDEM 202
F ++L+ YS G + +F+ + D+ A MI+A+ R G++D A +F
Sbjct: 160 KFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRN 219
Query: 203 PERN-SATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLF 261
PE N + +WN +I GYA++G + K +S
Sbjct: 220 PELNDTISWNTLIAGYAQNG--------YEEEALKMAVS--------------------- 250
Query: 262 HEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKC 321
M GL DE + V++ + L +L +GKEVH ++ NG + ++ S ++D+Y KC
Sbjct: 251 --MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKC 308
Query: 322 GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGI----------- 370
G++ + NL+ +SMI G ++ G EA ++F + K +
Sbjct: 309 GNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYL 368
Query: 371 ---------------------RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPG 409
P+ + VSVL AC+ ++E G+ I + + G
Sbjct: 369 NLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKE-----IHGHSLRTG 423
Query: 410 I----EHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
I + VD+ SK G +E A E I +FE ++ ++ A+++GC H
Sbjct: 424 ILMDKKLVTAFVDMYSKCGNVEYA-ERIFDSSFERDTVMYNAMIAGCAHH 472
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 167/381 (43%), Gaps = 89/381 (23%)
Query: 151 LVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFD-EMPERNSAT 209
LV YS GL +AR VFDEM ER+ ++W +I+A+V+ V A LF+ + ER+ T
Sbjct: 29 LVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELFESDNCERDLIT 88
Query: 210 WNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGL 269
+N ++ G+AK+ E I + FG++ H +
Sbjct: 89 YNTLLSGFAKTDGCESEAI-----------------------EMFGEM----HRKEKDDI 121
Query: 270 APDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKC-------- 321
D+ +TT++ A L + G+++H L+ G + SSLI MY+KC
Sbjct: 122 WIDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCN 181
Query: 322 -------------------------GSIDRSLLVFYK-LQVKNLFCWNSMIDGLATHGYA 355
G ID++L VF++ ++ + WN++I G A +GY
Sbjct: 182 IFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYE 241
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVLTACT-----------HAGFVEEG--RSRFVS--M 400
+EALKM ME G++ + +F +VL + HA ++ G ++FVS +
Sbjct: 242 EEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGI 301
Query: 401 IEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEI 460
++ YC G Y LL G + A MI G + + G ++ +L +L
Sbjct: 302 VDVYC-KCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQ------GKMVEAKRLFDSLSE 354
Query: 461 ANVAVQNLMILEPSNSGYYSL 481
N+ V M L GY +L
Sbjct: 355 KNLVVWTAMFL-----GYLNL 370
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 228/464 (49%), Gaps = 53/464 (11%)
Query: 116 LVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD 175
LV + ++A +H K GF + F LV Y L ARK+FDEM E +
Sbjct: 35 LVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPN 94
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEMPE------------------------------- 204
+WT++IS + G+ +A +F +M E
Sbjct: 95 VVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIH 154
Query: 205 ---------RNSATWNAMIDGYAKSGNIECAEILFNRMPC--KDVISWTTLMTCYSRNKR 253
RN ++++D Y K ++E A +F+ M ++V+SWT+++T Y++N R
Sbjct: 155 ARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNAR 214
Query: 254 FGDVVTLFHEMVSRGLAPD---EVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI 310
+ + LF + L D + + +VISAC+ LG L GK H + G+ + +
Sbjct: 215 GHEAIELFRSF-NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVV 273
Query: 311 GSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGI 370
+SL+DMYAKCGS+ + +F +++ ++ + SMI A HG + A+K+F EM I
Sbjct: 274 ATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRI 333
Query: 371 RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL 430
PN VT + VL AC+H+G V EG M E Y + P HY C+VD+L + G +++A
Sbjct: 334 NPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAY 393
Query: 431 EMIRGMTF--EPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAE 488
E+ + + E + +WGALLS +LH +EI + A + L+ + Y L N YA
Sbjct: 394 ELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAV 453
Query: 489 VNRWKEVSKIRIAMKDLG--VEKTCPGSSWVEINQKIHLFAASD 530
W++ +R+ MK G E+ C SW+E +++F A D
Sbjct: 454 SGGWEDSESLRLEMKRSGNVKERAC---SWIENKDSVYVFHAGD 494
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 173/387 (44%), Gaps = 57/387 (14%)
Query: 39 IKTNANQDSFLMNQFIAA---CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQAL 95
+K D+F +N + + IN A F M PN + + +++ + AL
Sbjct: 56 LKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGKPQNAL 115
Query: 96 ACYVKMLRN-GVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEF 154
+ + KM + V P Y+F+S+ KAC+ L +S GK +H + G ++ V ++LV+
Sbjct: 116 SMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDM 175
Query: 155 YSMLGLAGDARKVFDEMP--ERDAFAWTTMISAHVRCGEVDSAARLFDEMP--------- 203
Y AR+VFD M R+ +WT+MI+A+ + A LF
Sbjct: 176 YGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRAN 235
Query: 204 --------------------------------ERNSATWNAMIDGYAKSGNIECAEILFN 231
E N+ +++D YAK G++ CAE +F
Sbjct: 236 QFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFL 295
Query: 232 RMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
R+ C VIS+T+++ +++ V LF EMV+ + P+ V + V+ AC+H G +
Sbjct: 296 RIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNE 355
Query: 292 GKEVHHYLMVNGFGL--DVYIGSSLIDMYAKCGSIDRSLLVFYKLQV---KNLFCWNSMI 346
G E + LM +G+ D + ++DM + G +D + + ++V + W +++
Sbjct: 356 GLE-YLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALL 414
Query: 347 DGLATHGYAKEALKMFSEMERKGIRPN 373
HG +++ SE ++ I+ N
Sbjct: 415 SAGRLHG----RVEIVSEASKRLIQSN 437
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 145/523 (27%), Positives = 255/523 (48%), Gaps = 50/523 (9%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVV-PTSYSFSSLVKACT 121
A F M + + ++ ++R+ V L + +M+ P + +S++KACT
Sbjct: 178 ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACT 237
Query: 122 LLMDSAAGKTVHGHVWKRGFD-AHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWT 180
++ D G++VHG +RGFD A VFV +L++ YS A +VFDE R+ +W
Sbjct: 238 VMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 181 TMISAHVRCGEVDSAARLFD------------------------EMP------------- 203
++++ V D A +F E P
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRR 357
Query: 204 --ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLF 261
E N +++ID Y ++ A + + M KDV+S +T+++ + R + +++F
Sbjct: 358 GYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIF 417
Query: 262 HEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL-DVYIGSSLIDMYAK 320
M P+ + + ++++AC+ L K H + + D+ +G+S++D YAK
Sbjct: 418 CHMRD---TPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAK 474
Query: 321 CGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSV 380
CG+I+ + F ++ KN+ W +I A +G +AL +F EM++KG PN VT+++
Sbjct: 475 CGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAA 534
Query: 381 LTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT--F 438
L+AC H G V++G F SM+E+ P ++HY C+VD+LS+ G I+ A+E+I+ +
Sbjct: 535 LSACNHGGLVKKGLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPEDV 593
Query: 439 EPNSFIWGALLSGCK-LHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSK 497
+ + WGA+LSGC+ + L I + V ++ LEP S Y L + +A W++V+
Sbjct: 594 KAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAM 653
Query: 498 IRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVN 540
+R +K+ V + G S V F A D S +N
Sbjct: 654 MRRLVKERKV-RVVAGYSMVREGNLAKRFLAGDKLSQSDSELN 695
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 124/548 (22%), Positives = 230/548 (41%), Gaps = 99/548 (18%)
Query: 52 QFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSY 111
F C + F M++ +++ +N ++ + + L + K+ G P +
Sbjct: 69 DFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTS 128
Query: 112 SFSSLVKAC-TLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDE 170
+ ++ AC +L D G+ +HG+V + GF VQ +++ Y+ + ARK+FDE
Sbjct: 129 TLVLVIHACRSLWFD---GEKIHGYVIRSGFCGISSVQNSILCMYADSD-SLSARKLFDE 184
Query: 171 MPERDAFAWTTMISAHVRCGEVDSAARLFDEM-------PERNSAT-------------- 209
M ERD +W+ +I ++V+ E +LF EM P+ + T
Sbjct: 185 MSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDV 244
Query: 210 --------------------WNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYS 249
N++ID Y+K +++ A +F+ C++++SW +++ +
Sbjct: 245 GRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFV 304
Query: 250 RNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVY 309
N+R+ + + +FH MV + DEV + +++ C K +H ++ G+ +
Sbjct: 305 HNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEV 364
Query: 310 IGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG 369
SSLID Y C +D + V + K++ ++MI GLA G + EA+ +F M
Sbjct: 365 ALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT- 423
Query: 370 IRPNGVTFVSVLTACT------------------------------------HAGFVEEG 393
PN +T +S+L AC+ G +E
Sbjct: 424 --PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMA 481
Query: 394 RSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLS 450
R F + E IS + ++ + GL + AL + M + PN+ + A LS
Sbjct: 482 RRTFDQITEKNIIS-----WTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALS 536
Query: 451 GCKLHRNLEIANVAVQNLMILEPSNSG--YYSLLVNMYAEVNRWKEVSKIRIAMKDLGVE 508
C H L + + M+ E +YS +V+M ++R E+ +K+L +
Sbjct: 537 ACN-HGGLVKKGLMIFKSMVEEDHKPSLQHYSCIVDM---LSRAGEIDTAVELIKNLPED 592
Query: 509 KTCPGSSW 516
S+W
Sbjct: 593 VKAGASAW 600
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 142/329 (43%), Gaps = 40/329 (12%)
Query: 46 DSFLMNQFIAACTT---INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKML 102
D F+ N I + ++ A F N + +N++L VH R +AL + M+
Sbjct: 261 DVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMV 320
Query: 103 RNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAG 162
+ V + SL++ C K++HG + +RG++++ ++L++ Y+ L
Sbjct: 321 QEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVD 380
Query: 163 DARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSA-------------- 208
DA V D M +D + +TMIS G D A +F M + +A
Sbjct: 381 DAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSA 440
Query: 209 -----TW------------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLM 245
W +++D YAK G IE A F+++ K++ISWT ++
Sbjct: 441 DLRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVII 500
Query: 246 TCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFG 305
+ Y+ N + LF EM +G P+ V +SAC H G + G + ++
Sbjct: 501 SAYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDHK 560
Query: 306 LDVYIGSSLIDMYAKCGSIDRSLLVFYKL 334
+ S ++DM ++ G ID ++ + L
Sbjct: 561 PSLQHYSCIVDMLSRAGEIDTAVELIKNL 589
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 113/247 (45%), Gaps = 15/247 (6%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
N++ D Y K G++ F+ M +D +SW ++ + + F ++ G
Sbjct: 65 NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFE 124
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
P+ + VI AC L G+++H Y++ +GF + +S++ MYA S+ L
Sbjct: 125 PNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLSARKL- 181
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG-IRPNGVTFVSVLTACTHAGF 389
F ++ +++ W+ +I LK+F EM + P+ VT SVL ACT
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMED 241
Query: 390 VEEGRSRFVSMIEDYCISPGIEH---YGC--MVDLLSKGGLIEDALEMIRGMTFEPNSFI 444
++ GRS + + I G + + C ++D+ SKG ++ A + T N
Sbjct: 242 IDVGRS-----VHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCR-NIVS 295
Query: 445 WGALLSG 451
W ++L+G
Sbjct: 296 WNSILAG 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 20/156 (12%)
Query: 235 CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA-PDEVAMTTVISACAHLGALGLGK 293
C + + ++ + S + ++ +VV+ + E+ G+ D V ACA L L
Sbjct: 6 CSKLQALSSKIKQASVSGKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKLSWL---- 61
Query: 294 EVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHG 353
+ G+S+ D Y KCG + L F + ++ WN ++ GL +G
Sbjct: 62 ---------------FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYG 106
Query: 354 YAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGF 389
+ +E L FS++ G PN T V V+ AC F
Sbjct: 107 FEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWF 142
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/518 (26%), Positives = 250/518 (48%), Gaps = 41/518 (7%)
Query: 53 FIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYS 112
F + + + A + + ++ +++ V R+ +A+ +++M G+ P +++
Sbjct: 268 FYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFT 327
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAG-DARKVFDEM 171
+S+++ C+ + GK +H K GF+ V LV+ Y + +A +VF M
Sbjct: 328 YSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM 387
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATW----------------- 210
+ +WTT+I V G V L EM +R N T
Sbjct: 388 VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVL 447
Query: 211 ------------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNK 252
N+++D YA S ++ A + M +D I++T+L+T ++
Sbjct: 448 EIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELG 507
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
+ +++ + M G+ D++++ ISA A+LGAL GK +H Y + +GF + +
Sbjct: 508 KHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLN 567
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRP 372
SL+DMY+KCGS++ + VF ++ ++ WN ++ GLA++G+ AL F EM K P
Sbjct: 568 SLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEP 627
Query: 373 NGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM 432
+ VTF+ +L+AC++ + G F M + Y I P +EHY +V +L + G +E+A +
Sbjct: 628 DSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGV 687
Query: 433 IRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRW 492
+ M +PN+ I+ LL C+ NL + + L PS+ Y LL ++Y E +
Sbjct: 688 VETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKP 747
Query: 493 KEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASD 530
+ K R M + + K G S VE+ K+H F + D
Sbjct: 748 ELAQKTRNLMTEKRLSKKL-GKSTVEVQGKVHSFVSED 784
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 168/362 (46%), Gaps = 39/362 (10%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F M + + ++ AL+ + +M+ +G P ++FSS+V++C
Sbjct: 77 ARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAG 136
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
L D + G VHG V K GF+ + V ++L + YS G +A ++F + D +WT M
Sbjct: 137 LRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMM 196
Query: 183 ISAHVRCGEVDSAARLFDEM------PER------------------------------- 205
IS+ V + A + + EM P
Sbjct: 197 ISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIP 256
Query: 206 -NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM 264
N +++D Y++ +E A + N +DV WT++++ + RN R + V F EM
Sbjct: 257 LNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEM 316
Query: 265 VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSI 324
S GL P+ + ++S C+ + +L GK++H + GF +G++L+DMY KC +
Sbjct: 317 RSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSAS 376
Query: 325 D-RSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTA 383
+ + VF + N+ W ++I GL HG+ ++ + EM ++ + PN VT VL A
Sbjct: 377 EVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Query: 384 CT 385
C+
Sbjct: 437 CS 438
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 173/390 (44%), Gaps = 55/390 (14%)
Query: 115 SLVKACTLLMD------SAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF 168
+L K+C ++ S G +H V K G ++ + L+ Y +ARK+F
Sbjct: 22 NLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLF 81
Query: 169 DEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM------P------------------- 203
DEM R FAWT MISA + E SA LF+EM P
Sbjct: 82 DEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDIS 141
Query: 204 --------------ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYS 249
E NS +++ D Y+K G + A LF+ + D ISWT +++
Sbjct: 142 YGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLV 201
Query: 250 RNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVY 309
+++ + + + EMV G+ P+E ++ A + LG L GK +H ++V G L+V
Sbjct: 202 GARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVV 260
Query: 310 IGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG 369
+ +SL+D Y++ ++ ++ V +++F W S++ G + AKEA+ F EM G
Sbjct: 261 LKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG 320
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHY----GCMVDLLSKGGL 425
++PN T+ ++L+ C+ ++ G+ I I G E +VD+ K
Sbjct: 321 LQPNNFTYSAILSLCSAVRSLDFGKQ-----IHSQTIKVGFEDSTDVGNALVDMYMKCSA 375
Query: 426 IEDALEMIRGMTFEPNSFIWGALLSGCKLH 455
E + G PN W L+ G H
Sbjct: 376 SEVEASRVFGAMVSPNVVSWTTLILGLVDH 405
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 148/277 (53%), Gaps = 11/277 (3%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
N ++ Y K+ I A LF+ M + V +WT +++ +++++ F ++LF EM++ G
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTH 121
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
P+E ++V+ +CA L + G VH ++ GF + +GSSL D+Y+KCG + +
Sbjct: 122 PNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACEL 181
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
F LQ + W MI L +EAL+ +SEM + G+ PN TFV +L A + G +
Sbjct: 182 FSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLG-L 240
Query: 391 EEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLS 450
E G++ ++I I + +VD S+ +EDA+ ++ + E + F+W +++S
Sbjct: 241 EFGKTIHSNIIVR-GIPLNVVLKTSLVDFYSQFSKMEDAVRVLNS-SGEQDVFLWTSVVS 298
Query: 451 GCKLHRNLEIANVAVQNLMI-----LEPSNSGYYSLL 482
G RNL A AV + L+P+N Y ++L
Sbjct: 299 G--FVRNLR-AKEAVGTFLEMRSLGLQPNNFTYSAIL 332
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 140/518 (27%), Positives = 249/518 (48%), Gaps = 44/518 (8%)
Query: 55 AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFS 114
++C + A F ++N +A+ +N ++ + + L + ML +GV PT +++S
Sbjct: 245 SSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYS 304
Query: 115 SLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
++ C+ L + GK +H + A + + L++ Y G +A VF +
Sbjct: 305 IVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNP 364
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEM-----PERNSATWNAMIDG------------- 216
+ +W ++IS G + A ++ + P + T++A I
Sbjct: 365 NLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL 424
Query: 217 ----------------------YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRF 254
Y K+ E A+ +F+ M +DV+ WT ++ +SR
Sbjct: 425 HGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNS 484
Query: 255 GDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSL 314
V F EM D ++++VI AC+ + L G+ H + GF + + +L
Sbjct: 485 ELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGAL 544
Query: 315 IDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNG 374
+DMY K G + + +F +L CWNSM+ + HG ++AL F ++ G P+
Sbjct: 545 VDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDA 604
Query: 375 VTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIR 434
VT++S+L AC+H G +G+ + M E I G +HY CMV+L+SK GL+++ALE+I
Sbjct: 605 VTYLSLLAACSHRGSTLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIE 663
Query: 435 GMTFEPN-SFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWK 493
N + +W LLS C RNL+I A + ++ L+P ++ + LL N+YA RW+
Sbjct: 664 QSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWE 723
Query: 494 EVSKIRIAMKDLGVEKTCPGSSWVEI-NQKIHLFAASD 530
+V+++R ++ L K PG SW+E+ N +F++ D
Sbjct: 724 DVAEMRRKIRGLASSKD-PGLSWIEVNNNNTQVFSSGD 760
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 134/561 (23%), Positives = 241/561 (42%), Gaps = 99/561 (17%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRT-CVHCHRSHQALACYVKMLRNGVVPTSYSFSS 115
C ++ A F M + N + YNAL + + A M V P S +F+S
Sbjct: 145 CGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTS 204
Query: 116 LVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD 175
LV+ C +L D G +++ + K G+ +V VQT+++ YS G AR++FD + RD
Sbjct: 205 LVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRD 264
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEM------PERNSATW------------------- 210
A AW TMI ++ +++ F M P + + +
Sbjct: 265 AVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHA 324
Query: 211 --------------NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGD 256
NA++D Y G++ A +F R+ +++SW ++++ S N FG+
Sbjct: 325 RIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENG-FGE 383
Query: 257 VVTLFHEMVSR--GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSL 314
L + + R PDE + ISA A GK +H + G+ V++G++L
Sbjct: 384 QAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTL 443
Query: 315 IDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNG 374
+ MY K + + VF ++ +++ W MI G + G ++ A++ F EM R+ R +G
Sbjct: 444 LSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDG 503
Query: 375 VTFVSVLTACTHAGFVEEG--------RSRF----------------------VSMIEDY 404
+ SV+ AC+ + +G R+ F I
Sbjct: 504 FSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSL 563
Query: 405 CISPGIEHYGCMVDLLSKGGLIEDAL---EMIRGMTFEPNSFIWGALLSGCKLHRNLEIA 461
+P ++ + M+ S+ G++E AL E I F P++ + +LL+ C HR +
Sbjct: 564 ASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACS-HRGSTLQ 622
Query: 462 NVAVQNLMILEPSNSGY--YSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEI 519
+ N M + +G+ YS +VN+ ++ E ++ +E++ PG++ E+
Sbjct: 623 GKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALEL--------IEQSPPGNNQAEL 674
Query: 520 ------------NQKIHLFAA 528
N +I L+AA
Sbjct: 675 WRTLLSACVNTRNLQIGLYAA 695
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 146/316 (46%), Gaps = 44/316 (13%)
Query: 112 SFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHV---FVQTTLVEFYSMLGLAGDARKVF 168
S L + C + + +H V G A + L+ Y G ARKVF
Sbjct: 96 SVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVF 155
Query: 169 DEMPERDAFAWTTMISAHVRCGEVDSAA-----RLFDEMPERNSATWNAMID-------- 215
D+MP R+ ++ + SA+ R + S A + E + NS+T+ +++
Sbjct: 156 DKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDV 215
Query: 216 -------------GYAKS--------------GNIECAEILFNRMPCKDVISWTTLMTCY 248
GY+ + G++E A +F+ + +D ++W T++
Sbjct: 216 LMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGS 275
Query: 249 SRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDV 308
+N + D + F M+ G+ P + + V++ C+ LG+ LGK +H ++V+ D+
Sbjct: 276 LKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADL 335
Query: 309 YIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
+ ++L+DMY CG + + VF ++ NL WNS+I G + +G+ ++A+ M+ + R
Sbjct: 336 PLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Query: 369 GI-RPNGVTFVSVLTA 383
RP+ TF + ++A
Sbjct: 396 STPRPDEYTFSAAISA 411
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 188/435 (43%), Gaps = 27/435 (6%)
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWK 138
N L+ V C QA + KM + +V T + S++ + ++ G ++H + K
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIV-TLFGLSAVFEYVSM------GSSLHSQIIK 78
Query: 139 RGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARL 198
G +F F + +A ++ + I A V +A
Sbjct: 79 LGSFQMIF-------FMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAAT-- 129
Query: 199 FDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGD-V 257
E P N N +I Y + G++E A +F++MP ++V+S+ L + YSRN F
Sbjct: 130 --ESPYAN----NNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYA 183
Query: 258 VTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDM 317
L M + P+ T+++ CA L + +G ++ ++ G+ +V + +S++ M
Sbjct: 184 FPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGM 243
Query: 318 YAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTF 377
Y+ CG ++ + +F + ++ WN+MI G + ++ L F M G+ P T+
Sbjct: 244 YSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTY 303
Query: 378 VSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT 437
VL C+ G G+ +I ++ + ++D+ G + +A + G
Sbjct: 304 SIVLNGCSKLGSYSLGKLIHARIIVSDSLA-DLPLDNALLDMYCSCGDMREAF-YVFGRI 361
Query: 438 FEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILE-PSNSGY-YSLLVNMYAEVNRWKEV 495
PN W +++SGC + E A + + L+ + P Y +S ++ AE R+
Sbjct: 362 HNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHG 421
Query: 496 SKIRIAMKDLGVEKT 510
+ + LG E++
Sbjct: 422 KLLHGQVTKLGYERS 436
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 140/558 (25%), Positives = 251/558 (44%), Gaps = 97/558 (17%)
Query: 7 CKIHTLKDKILDQIKRCSKREKKTLESVYANMIKT------------------------N 42
C + + D++ +R ++ + E+ +A ++K+ N
Sbjct: 137 CAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGN 196
Query: 43 ANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKML 102
+ ++ +++ + C ++ A F + NP+ + +N ++R + + +A+ + KML
Sbjct: 197 VDLETSIVDVY-GKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML 255
Query: 103 RNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFY------- 155
V P +++ SS++ AC+ + GK +H K A V T++ + Y
Sbjct: 256 ELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLE 315
Query: 156 ------------------------SMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGE 191
+M GL +AR++FD MPER+ +W M+ +V E
Sbjct: 316 SARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHE 375
Query: 192 VDSAARLFDEMPER---------------------------------------NSATWNA 212
D A M + N NA
Sbjct: 376 WDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANA 435
Query: 213 MIDGYAKSGNIECAEILFNRMP-CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAP 271
++D Y K G ++ A I F +M +D +SW L+T +R R ++ F M P
Sbjct: 436 LLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KP 494
Query: 272 DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVF 331
+ + T+++ CA++ AL LGK +H +L+ +G+ +DV I +++DMY+KC D ++ VF
Sbjct: 495 SKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVF 554
Query: 332 YKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVE 391
+ ++L WNS+I G +G +KE ++F +E +G++P+ VTF+ +L AC G VE
Sbjct: 555 KEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHVE 614
Query: 392 EGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
G F SM Y ISP +EHY CM++L K G + E + M F+P + +
Sbjct: 615 LGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDPPMQMLTRINDA 674
Query: 452 CKLHRNLEIANVAVQNLM 469
C+ +R ++ A + LM
Sbjct: 675 CQRYRWSKLGAWAAKRLM 692
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 217/480 (45%), Gaps = 79/480 (16%)
Query: 48 FLMNQFIAA---CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRN 104
FL+N+ I A C ++ A F M + +NA++ C S + + +M R+
Sbjct: 97 FLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRD 156
Query: 105 GVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDA 164
GV T SF+ ++K+C L++D + +H V K G+ +V ++T++V+ Y + DA
Sbjct: 157 GVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDA 216
Query: 165 RKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWN------------- 211
R+VFDE+ +W ++ ++ G D A +F +M E N N
Sbjct: 217 RRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRS 276
Query: 212 --------------------------AMIDGYAKSGNIECAEILFNRMPCKDVISWTTLM 245
++ D Y K +E A +F++ KD+ SWT+ M
Sbjct: 277 LALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAM 336
Query: 246 TCYSRNKRFGDVVTLFHEMVSRGLAP-------------------------------DEV 274
+ Y+ + + LF M R + D V
Sbjct: 337 SGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNV 396
Query: 275 AMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL 334
+ +++ C+ + + +GK+ H ++ +G+ +V + ++L+DMY KCG++ + + F ++
Sbjct: 397 TLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQM 456
Query: 335 -QVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEG 393
++++ WN+++ G+A G +++AL F M+ + +P+ T ++L C + + G
Sbjct: 457 SELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLG 515
Query: 394 RSRFVSMIED-YCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGC 452
++ +I D Y I I G MVD+ SK + A+E+ + + +W +++ GC
Sbjct: 516 KAIHGFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEVFKEAATR-DLILWNSIIRGC 572
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 159/415 (38%), Gaps = 72/415 (17%)
Query: 108 PTSY-SFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARK 166
P SY + L ++C+ + V H+ +F+ +E Y G DAR+
Sbjct: 58 PVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARE 117
Query: 167 VFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER--------------------- 205
+F+EMPERD +W +I+A + G D R+F M
Sbjct: 118 LFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILD 177
Query: 206 ------------------NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTC 247
N +++D Y K + A +F+ + +SW ++
Sbjct: 178 LRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRR 237
Query: 248 YSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLD 307
Y + V +F +M+ + P +++V+ AC+ AL +GK +H + D
Sbjct: 238 YLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVAD 297
Query: 308 VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMER 367
+ +S+ DMY KC ++ + VF + + K+L W S + G A G +EA ++F M
Sbjct: 298 TVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPE 357
Query: 368 KGI-------------------------------RPNGVTFVSVLTACTHAGFVEEGRSR 396
+ I + VT V +L C+ V+ G+
Sbjct: 358 RNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQA 417
Query: 397 FVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
I + + ++D+ K G ++ A R M+ + W ALL+G
Sbjct: 418 H-GFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTG 471
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 149/340 (43%), Gaps = 25/340 (7%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
N I+ Y K G ++ A LF MP +D SW ++T ++N +V +F M G+
Sbjct: 100 NRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
E + V+ +C + L L +++H ++ G+ +V + +S++D+Y KC + + V
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
F ++ + WN ++ G+ EA+ MF +M +RP T SV+ AC+ + +
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLAL 279
Query: 391 EEGR-----SRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIW 445
E G+ + +S++ D +S + D+ K +E A + T + W
Sbjct: 280 EVGKVIHAIAVKLSVVADTVVSTSV------FDMYVKCDRLESARRVF-DQTRSKDLKSW 332
Query: 446 GALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKD- 504
+ +SG + + A + ++ N ++ ++ Y + W E M+
Sbjct: 333 TSAMSGYAMS---GLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQE 389
Query: 505 ---------LGVEKTCPGSSWVEINQKIHLFAASDNYHTS 535
+ + C G S V++ ++ H F Y T+
Sbjct: 390 IENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTN 429
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 154/566 (27%), Positives = 248/566 (43%), Gaps = 62/566 (10%)
Query: 47 SFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGV 106
+FL+N + A C I A F M N + + AL+ V + + ML +
Sbjct: 100 NFLINMY-AKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSH-C 157
Query: 107 VPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSML---GLAGD 163
P ++ SS++ +C GK VHG K G ++V ++ Y A +
Sbjct: 158 FPNEFTLSSVLTSCRY----EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYE 213
Query: 164 ARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLF------------------------ 199
A VF+ + ++ W +MI+A C A +F
Sbjct: 214 AWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYK 273
Query: 200 --DEMPERNSATWNAMIDGYAKSGNIECAEI--------------------LFNRMP-CK 236
D +P S + KSG + E+ LF M C+
Sbjct: 274 SSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCR 333
Query: 237 DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVH 296
D+++W ++T ++ + LF ++ L+PD ++V+ ACA L +H
Sbjct: 334 DIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIH 392
Query: 297 HYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAK 356
++ GF D + +SLI YAKCGS+D + VF + +++ WNSM+ + HG
Sbjct: 393 AQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVD 452
Query: 357 EALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCM 416
L +F +M+ I P+ TF+++L+AC+HAG VEEG F SM E P + HY C+
Sbjct: 453 SILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACV 509
Query: 417 VDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLM-ILEPSN 475
+D+LS+ +A E+I+ M +P++ +W ALL C+ H N + +A L ++EP+N
Sbjct: 510 IDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTN 569
Query: 476 SGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTS 535
S Y + N+Y + E + M+ V K P SW EI K+H FA+ +
Sbjct: 570 SMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKE-PDLSWTEIGNKVHEFASGGRHRPD 628
Query: 536 YGHVNXXXXXXXXXXXXAGYVPELGS 561
V GYVPE+ S
Sbjct: 629 KEAVYRELKRLISWLKEMGYVPEMRS 654
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/476 (19%), Positives = 187/476 (39%), Gaps = 90/476 (18%)
Query: 107 VPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGF--DAHVFVQTTLVEFYSMLGLAGDA 164
+ + ++++L +AC + G +H H+ + +V + L+ Y+ G A
Sbjct: 56 LQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYA 115
Query: 165 RKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER---NSATWNAM-------- 213
R+VFD MPER+ +WT +I+ +V+ G LF M N T +++
Sbjct: 116 RQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEP 175
Query: 214 ---IDGYAKSGNIEC-----------------------AEILFNRMPCKDVISWTTLMTC 247
+ G A + C A +F + K++++W +++
Sbjct: 176 GKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 248 YSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK------EVHHYLMV 301
+ + +F M S G+ D + + S+ L + ++H +
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVK 295
Query: 302 NGFGLDVYIGSSLIDMYAKC--GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEAL 359
+G + ++LI +Y++ D L +++ WN +I A + + A+
Sbjct: 296 SGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAI 354
Query: 360 KMFSEMERKGIRPNGVTFVSVLTACT-----------HAGFVEEGRSRFV-------SMI 401
+F ++ ++ + P+ TF SVL AC HA ++ G F+ S+I
Sbjct: 355 HLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGG---FLADTVLNNSLI 411
Query: 402 E--------DYCI-------SPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWG 446
D C+ S + + M+ S G ++ L + + M P+S +
Sbjct: 412 HAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFI 471
Query: 447 ALLSGC----KLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKI 498
ALLS C ++ L I + L N +Y+ +++M + R+ E ++
Sbjct: 472 ALLSACSHAGRVEEGLRIFRSMFEKPETLPQLN--HYACVIDMLSRAERFAEAEEV 525
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%), Gaps = 16/143 (11%)
Query: 253 RFGDV---VTLFHEMVSRGLAPDEV----AMTTVISACAHLGALGLGKEVHHYLMVNGF- 304
R GD+ V+LF+ AP E+ A + ACA L G +HH+++ + +
Sbjct: 38 RSGDIRRAVSLFYS------APVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYC 91
Query: 305 -GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFS 363
+V + + LI+MYAKCG+I + VF + +N+ W ++I G G +E +FS
Sbjct: 92 YSQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFS 151
Query: 364 EMERKGIRPNGVTFVSVLTACTH 386
M PN T SVLT+C +
Sbjct: 152 SMLSHCF-PNEFTLSSVLTSCRY 173
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/330 (34%), Positives = 189/330 (57%), Gaps = 14/330 (4%)
Query: 212 AMIDGYAKSGNIECAEILFNRMPCK-DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
+++ Y+ G+++ A +F+ P K +++ WT +++ Y+ N+ + + LF M + +
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIE 164
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNG--FGLDVYIGSSLIDMYAKCGSIDRSL 328
D V +T +SACA LGA+ +G+E++ + +D+ + +SL++MY K G +++
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKAR 224
Query: 329 LVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM------ERKGIRPNGVTFVSVLT 382
+F + K++ + SMI G A +G A+E+L++F +M + I PN VTF+ VL
Sbjct: 225 KLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLM 284
Query: 383 ACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNS 442
AC+H+G VEEG+ F SMI DY + P H+GCMVDL + G ++DA E I M +PN+
Sbjct: 285 ACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNT 344
Query: 443 FIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAM 502
IW LL C LH N+E+ + + L+ + G Y L N+YA W E SK M
Sbjct: 345 VIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSK----M 400
Query: 503 KDLGVEKTCPGSSWVEINQKIHLF-AASDN 531
+D ++ PG SW+E+ I+ F + DN
Sbjct: 401 RDRVRKRRMPGKSWIELGSIINEFVSGPDN 430
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 134/316 (42%), Gaps = 81/316 (25%)
Query: 126 SAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA-WTTMIS 184
S G+ +H V K GF+A + +QT+LV FYS +G AR+VFDE PE+ WT MIS
Sbjct: 81 SLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMIS 140
Query: 185 AHVRCGEVDSAARLFDEMPER--------------------------------------- 205
A+ A LF M
Sbjct: 141 AYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRL 200
Query: 206 --NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHE 263
+ N++++ Y KSG E A LF+ KDV ++T+++ Y+ N + + + LF +
Sbjct: 201 AMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKK 260
Query: 264 MVSRG------LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDM 317
M + + P++V V+ AC+H G + GK H+
Sbjct: 261 MKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGK--RHF------------------- 299
Query: 318 YAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTF 377
+S+++ Y L+ + + M+D G+ K+A + ++M I+PN V +
Sbjct: 300 --------KSMIMDYNLKPREAH-FGCMVDLFCRSGHLKDAHEFINQMP---IKPNTVIW 347
Query: 378 VSVLTACTHAGFVEEG 393
++L AC+ G VE G
Sbjct: 348 RTLLGACSLHGNVELG 363
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 186/352 (52%), Gaps = 44/352 (12%)
Query: 180 TTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAK-----SGNIECAEILFNRMP 234
TT++ + + G++ A ++FDEMPER S TWNAMI GY + N A +LF R
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRFS 210
Query: 235 CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKE 294
C C S G+ P + M V+SA + G L +G
Sbjct: 211 C-----------CGS------------------GVRPTDTTMVCVLSAISQTGLLEIGSL 241
Query: 295 VHHYLMVNGFG--LDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATH 352
VH Y+ GF +DV+IG++L+DMY+KCG ++ + VF ++VKN+F W SM GLA +
Sbjct: 242 VHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALN 301
Query: 353 GYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH 412
G E + + M GI+PN +TF S+L+A H G VEEG F SM + ++P IEH
Sbjct: 302 GRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEH 361
Query: 413 YGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILE 472
YGC+VDLL K G I++A + I M +P++ + +L + C ++ + + L+ +E
Sbjct: 362 YGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIE 421
Query: 473 PSNSGY-------YSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWV 517
+ Y L N+ A +W EV K+R MK+ + KT PG S+V
Sbjct: 422 REDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRI-KTRPGYSFV 472
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 132/318 (41%), Gaps = 59/318 (18%)
Query: 129 GKTVHGHVWKRGFDAHV-FVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHV 187
G+ VHG V K GF + TTL+ FY+ G ARKVFDEMPER + W MI +
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 188 R---------------------CG-----------------------EVDSAARLFDE-- 201
CG E+ S + E
Sbjct: 190 SHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKL 249
Query: 202 --MPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVT 259
PE + A++D Y+K G + A +F M K+V +WT++ T + N R +
Sbjct: 250 GFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPN 309
Query: 260 LFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG--SSLIDM 317
L + M G+ P+E+ T+++SA H+G + G E+ M FG+ I ++D+
Sbjct: 310 LLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKS-MKTRFGVTPVIEHYGCIVDL 368
Query: 318 YAKCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATHG---YAKEALKMFSEMERKGIRPN 373
K G I + + +K + S+ + + +G +E K E+ER+ + +
Sbjct: 369 LGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLS 428
Query: 374 GVT---FVSVLTACTHAG 388
G +V++ H G
Sbjct: 429 GSECEDYVALSNVLAHKG 446
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 145/506 (28%), Positives = 245/506 (48%), Gaps = 54/506 (10%)
Query: 61 NLATHA---FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLV 117
N ATHA F + + N+ L + + + LA ++++ R +S++F+ ++
Sbjct: 32 NFATHADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVL 91
Query: 118 KACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAF 177
AC+LL G+ VH + K+G + +T L++ YS G D+ +VF+ + E+D
Sbjct: 92 GACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLV 151
Query: 178 AWTTMISAHVRCGEVDSA----ARLFDEMPERNSATWN---------------------- 211
+W ++S +R G+ A A ++ E E + T +
Sbjct: 152 SWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMV 211
Query: 212 ------------AMIDGYAKSGNIECAEILFNRMPC-KDVISWTTLMTCYSRNKRFGDVV 258
AMI Y+ G I A ++N + D + +L++ RN+ + +
Sbjct: 212 VVTGRDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF 271
Query: 259 TLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMY 318
L P+ +++ ++ C+ L +GK++H + NGF D + + L+DMY
Sbjct: 272 LLMSRQ-----RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMY 326
Query: 319 AKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM--ERKGIRPNGVT 376
KCG I ++ +F + K++ W SMID A +G +AL++F EM E G+ PN VT
Sbjct: 327 GKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVT 386
Query: 377 FVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
F+ V++AC HAG V+EG+ F M E Y + PG EHY C +D+LSK G E+ ++ M
Sbjct: 387 FLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERM 446
Query: 437 TFEPNS----FIWGALLSGCKLHRNLEIANVAVQNLM-ILEPSNSGYYSLLVNMYAEVNR 491
N IW A+LS C L+ +L + LM P N+ Y L+ N YA + +
Sbjct: 447 MENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGK 506
Query: 492 WKEVSKIRIAMKDLGVEKTCPGSSWV 517
W V ++R +K+ G+ KT S ++
Sbjct: 507 WDVVEELRGKLKNKGLVKTAGHSLFI 532
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 125/303 (41%), Gaps = 18/303 (5%)
Query: 50 MNQFIAACTTINLATHAFSHMD-NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVP 108
M F ++ IN A ++ ++ + + ++ N+L+ C+ +A +L + P
Sbjct: 225 MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF-----LLMSRQRP 279
Query: 109 TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF 168
SS + C+ D GK +H + GF + + L++ Y G AR +F
Sbjct: 280 NVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIF 339
Query: 169 DEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER------NSATWNAMIDGYAKSGN 222
+P + +WT+MI A+ G+ A +F EM E NS T+ +I A +G
Sbjct: 340 RAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGL 399
Query: 223 IECAEILFNRMPCK-DVISWTTLMTCY----SRNKRFGDVVTLFHEMVSRGLAPDEVAM- 276
++ + F M K ++ T C+ S+ ++ L M+ A+
Sbjct: 400 VKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIW 459
Query: 277 TTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV 336
V+SAC+ L G+ V LM + I + + YA G D + KL+
Sbjct: 460 VAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKN 519
Query: 337 KNL 339
K L
Sbjct: 520 KGL 522
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 208 bits (529), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 129/458 (28%), Positives = 217/458 (47%), Gaps = 63/458 (13%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
+ FS + P+ +NA+L + +A++ + +M + P + S ++ +
Sbjct: 366 VETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSS 425
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAW 179
C L GK +HG V + + + + L+ YS
Sbjct: 426 CARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYS----------------------- 462
Query: 180 TTMISAHVRCGEVDSAARLFDE-MPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDV 238
C +++ + +FD+ + E + A WN+MI G+ + A ILF RM V
Sbjct: 463 --------ECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV 514
Query: 239 ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHY 298
L P+E + TV+S+C+ L +L G++ H
Sbjct: 515 ------------------------------LCPNETSFATVLSSCSRLCSLLHGRQFHGL 544
Query: 299 LMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEA 358
++ +G+ D ++ ++L DMY KCG ID + F + KN WN MI G +G EA
Sbjct: 545 VVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEA 604
Query: 359 LKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVD 418
+ ++ +M G +P+G+TFVSVLTAC+H+G VE G SM + I P ++HY C+VD
Sbjct: 605 VGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVD 664
Query: 419 LLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGY 478
L + G +EDA ++ ++ +S +W LLS C++H ++ +A + LM L+P +S
Sbjct: 665 CLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAA 724
Query: 479 YSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSW 516
Y LL N Y+ + +W + + ++ M V KT PG SW
Sbjct: 725 YVLLSNTYSSLRQWDDSAALQGLMNKNRVHKT-PGQSW 761
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/451 (25%), Positives = 191/451 (42%), Gaps = 95/451 (21%)
Query: 128 AGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEM---------------- 171
+GK +HG + + G + ++ L++ Y G ARKVFDEM
Sbjct: 24 SGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRC 83
Query: 172 ---------------PERDAFAWTTMISAHVRCGEVDSAARLFDEM------PER----- 205
PERD +W MIS VR G + A ++ M P R
Sbjct: 84 KVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLAS 143
Query: 206 ----------------------------NSATWNAMIDGYAKSGNI-ECAEILFNRMPCK 236
N NA++ YAK G I + +F +
Sbjct: 144 VLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQP 203
Query: 237 DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVIS------ACAHLGAL- 289
+ +S+T ++ +R + + V +F M +G+ D V ++ ++S C L +
Sbjct: 204 NEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIY 263
Query: 290 --GLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMID 347
LGK++H + GFG D+++ +SL+++YAK ++ + L+F ++ N+ WN MI
Sbjct: 264 GNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIV 323
Query: 348 GLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCIS 407
G + ++++ + M G +PN VT +SVL AC +G VE GR F S+ +
Sbjct: 324 GFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQ----- 378
Query: 408 PGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE---PNSFIWGALLSGCKLHRNLE----I 460
P + + M+ S E+A+ R M F+ P+ +LS C R LE I
Sbjct: 379 PSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQI 438
Query: 461 ANVAVQNLMILEPSNSGYYSLLVNMYAEVNR 491
V ++ + NS S L+ +Y+E +
Sbjct: 439 HGVVIRTEI---SKNSHIVSGLIAVYSECEK 466
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/402 (20%), Positives = 164/402 (40%), Gaps = 87/402 (21%)
Query: 45 QDSFLMNQFIA-ACTTINL--ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKM 101
+D + N F+ C +L A F M + + +N ++ V +AL Y +M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 102 LRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLA 161
+ +G +P+ ++ +S++ AC+ ++D G HG K G D ++FV L+ Y+ G
Sbjct: 130 VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI 189
Query: 162 GD-ARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER----------NSATW 210
D +VF+ + + + ++T +I R +V A ++F M E+ N +
Sbjct: 190 VDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSI 249
Query: 211 NAMIDG--------------------------------------YAKSGNIECAEILFNR 232
+A +G YAK+ ++ AE++F
Sbjct: 250 SAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAE 309
Query: 233 MPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLG 292
MP +V+SW ++ + + R V M G P+EV +V+ AC G + G
Sbjct: 310 MPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETG 369
Query: 293 KEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATH 352
+ +F + ++ WN+M+ G + +
Sbjct: 370 RR-----------------------------------IFSSIPQPSVSAWNAMLSGYSNY 394
Query: 353 GYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGR 394
+ +EA+ F +M+ + ++P+ T +L++C F+E G+
Sbjct: 395 EHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGK 436
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 204/414 (49%), Gaps = 43/414 (10%)
Query: 143 AHVFVQTTLVEFYSMLG-LAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDE 201
++V + + LV YS L L + VF MP R+ F+W +I R G + LF
Sbjct: 64 SNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLR 123
Query: 202 M-------PE--------------RNSATWN-------------------AMIDGYAKSG 221
M P+ R + + + A++ Y G
Sbjct: 124 MWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMG 183
Query: 222 NIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVIS 281
+ A LF+ MP +D + +T + Y + + +F EM G A D V M +++
Sbjct: 184 KLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLM 243
Query: 282 ACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFC 341
AC LGAL GK VH + + L + +G+++ DMY KC +D + VF + +++
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 342 WNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMI 401
W+S+I G G + K+F EM ++GI PN VTF+ VL+AC H G VE+ F ++
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYF-RLM 362
Query: 402 EDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIA 461
++Y I P ++HY + D +S+ GL+E+A + + M +P+ + GA+LSGCK++ N+E+
Sbjct: 363 QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVG 422
Query: 462 NVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSS 515
+ L+ L+P + YY L +Y+ R+ E +R MK+ + K PG S
Sbjct: 423 ERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKV-PGCS 475
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 168/411 (40%), Gaps = 92/411 (22%)
Query: 67 FSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVV-PTSYSFSSLVKACTLLMD 125
F HM N +N ++ + +++ +++M R V P ++ +++AC+ +
Sbjct: 90 FWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASRE 149
Query: 126 SAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISA 185
+ +G +H K GF + +FV + LV Y +G ARK+FD+MP RD+ +T M
Sbjct: 150 AKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGG 209
Query: 186 HVRCGEVDSAARLFDEMPERNSAT--------------------------W--------- 210
+V+ GE +F EM A W
Sbjct: 210 YVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLG 269
Query: 211 ----NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVV---TLFHE 263
NA+ D Y K ++ A +F M +DVISW++L+ Y + GDVV LF E
Sbjct: 270 LNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLD---GDVVMSFKLFDE 326
Query: 264 MVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGS 323
M+ G+ P+ V V+SACAH G
Sbjct: 327 MLKEGIEPNAVTFLGVLSACAH-----------------------------------GGL 351
Query: 324 IDRSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVS 379
+++S L F +Q V L + S+ D ++ G +EA K +M ++P+ +
Sbjct: 352 VEKSWLYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMP---VKPDEAVMGA 408
Query: 380 VLTACTHAGFVEEGRSRFVSMIEDYCISP-GIEHYGCMVDLLSKGGLIEDA 429
VL+ C G VE G +I+ + P +Y + L S G ++A
Sbjct: 409 VLSGCKVYGNVEVGERVARELIQ---LKPRKASYYVTLAGLYSAAGRFDEA 456
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 147/545 (26%), Positives = 237/545 (43%), Gaps = 79/545 (14%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFIAACTT---INLATHAFSHMDNPNALVYNALLRTC 85
K +ES+Y M+ QD+ + I A + ++ A F+++ N + YNAL+
Sbjct: 337 KKVESLYEMMMA----QDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAG- 391
Query: 86 VHCHRSH--QALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDA 143
C H +AL + ML+ GV T +S +S V AC L+ + + +HG K G
Sbjct: 392 -FCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAF 450
Query: 144 HVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP 203
+ +QT L++ + RC + A +FD+ P
Sbjct: 451 NPCIQTALLDMCT-------------------------------RCERMADAEEMFDQWP 479
Query: 204 ER--NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLF 261
+S ++I GYA++G +P K V+LF
Sbjct: 480 SNLDSSKATTSIIGGYARNG-----------LPDK--------------------AVSLF 508
Query: 262 HE-MVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAK 320
H + + L DEV++T +++ C LG +G ++H Y + G+ D+ +G+SLI MYAK
Sbjct: 509 HRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAK 568
Query: 321 CGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSV 380
C D ++ +F ++ ++ WNS+I EAL ++S M K I+P+ +T V
Sbjct: 569 CCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLV 628
Query: 381 LTAC--THAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF 438
++A T + + R F+SM Y I P EHY V +L GL+E+A + I M
Sbjct: 629 ISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPV 688
Query: 439 EPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKI 498
+P + ALL C++H N +A + ++ +P Y L N+Y+ W I
Sbjct: 689 QPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMI 748
Query: 499 RIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPE 558
R M++ G K P SW+ KIH F A D H + GY P
Sbjct: 749 REEMRERGYRKH-PAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIMECLKVGYEPN 807
Query: 559 LGSIL 563
+L
Sbjct: 808 TEYVL 812
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 110/510 (21%), Positives = 213/510 (41%), Gaps = 91/510 (17%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDNPNALVYNALLRTCVHC 88
++V+A+ +K + + L N I+ + A F + +P + Y AL+
Sbjct: 100 KAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRL 158
Query: 89 HRSHQALACYVKMLRNGVV-PTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
+ +AL + +M + G+V P Y+F +++ AC + + G +HG + K GF VFV
Sbjct: 159 NLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFV 218
Query: 148 QTTLVEFYSMLGLAG--DARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE- 204
+L+ Y + D K+FDE+P+RD +W T++S+ V+ G+ A LF EM
Sbjct: 219 SNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRV 278
Query: 205 ---------------------------------------RNSATWNAMIDGYAKSGNIEC 225
+ + NA+I Y+K +++
Sbjct: 279 EGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKK 338
Query: 226 AEILFNRMPCKDVISWTTLMTCY-------------------------------SRNKRF 254
E L+ M +D +++T ++T Y RN
Sbjct: 339 VESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHG 398
Query: 255 GDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSL 314
+ LF +M+ RG+ + ++T+ + AC + + +++H + + G + I ++L
Sbjct: 399 LKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTAL 458
Query: 315 IDMYAKCGSIDRSLLVF--YKLQVKNLFCWNSMIDGLATHGYAKEALKMFSE-MERKGIR 371
+DM +C + + +F + + + S+I G A +G +A+ +F + + +
Sbjct: 459 LDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLF 518
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPG----IEHYGCMVDLLSKGGLIE 427
+ V+ +L C GF E G I Y + G I ++ + +K +
Sbjct: 519 LDEVSLTLILAVCGTLGFREMGYQ-----IHCYALKAGYFSDISLGNSLISMYAKCCDSD 573
Query: 428 DALEMIRGMTFEPNSFIWGALLSGCKLHRN 457
DA+++ M E + W +L+S L RN
Sbjct: 574 DAIKIFNTMR-EHDVISWNSLISCYILQRN 602
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 113/225 (50%), Gaps = 5/225 (2%)
Query: 175 DAFAWTTMISAHVRCGEVDSAARL-FDEMPERNSATWNAMIDGYAKSGNIECAEILFNRM 233
D F + +SA EV A F ++ E + NA+I Y K G A ++F +
Sbjct: 81 DGFFYLLRLSAQYHDVEVTKAVHASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSL 140
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA-PDEVAMTTVISACAHLGALGLG 292
V+S+T L++ +SR + + +F M GL P+E +++AC + LG
Sbjct: 141 SSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLG 200
Query: 293 KEVHHYLMVNGFGLDVYIGSSLIDMYAK--CGSIDRSLLVFYKLQVKNLFCWNSMIDGLA 350
++H ++ +GF V++ +SL+ +Y K S D L +F ++ +++ WN+++ L
Sbjct: 201 IQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLV 260
Query: 351 THGYAKEALKMFSEMER-KGIRPNGVTFVSVLTACTHAGFVEEGR 394
G + +A +F EM R +G + T ++L++CT + + GR
Sbjct: 261 KEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGR 305
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 220/451 (48%), Gaps = 40/451 (8%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLR-NGVVPTSYSFSS 115
C LA F + + + + YNA + + + + + M + + P +F +
Sbjct: 177 CGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVN 236
Query: 116 LVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD 175
+ AC L++ G+ +HG V K+ F V T L++ YS
Sbjct: 237 AITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYS------------------- 277
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEMPE-RNSATWNAMIDGYAKSGNIECAEILFNRMP 234
+C SA +F E+ + RN +WN++I G +G E A LF ++
Sbjct: 278 ------------KCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLD 325
Query: 235 CK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALG 290
+ D +W +L++ +S+ + + F M+S + P +T+++SAC+ + L
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLK 385
Query: 291 LGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG--SIDRSLLVFYKLQVKNLFCWNSMIDG 348
GKE+H +++ D+++ +SLIDMY KCG S R + ++ + K+ WN MI G
Sbjct: 386 NGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISG 445
Query: 349 LATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISP 408
HG + A+++F + + + P+ TF +VL+AC+H G VE+G F M E+Y P
Sbjct: 446 YGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKP 505
Query: 409 GIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNL 468
EH GCM+DLL + G + +A E+I M+ +S +LL C+ H + + A L
Sbjct: 506 STEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAMKL 564
Query: 469 MILEPSNSGYYSLLVNMYAEVNRWKEVSKIR 499
LEP N + +L ++YA + RW++V IR
Sbjct: 565 AELEPENPAPFVILSSIYAALERWEDVESIR 595
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/352 (27%), Positives = 165/352 (46%), Gaps = 42/352 (11%)
Query: 108 PTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKV 167
P ++F L+K+C L D G+ +H V K GF VF T LV Y + DA KV
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 168 FDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM----PERNSATWNAMIDG------- 216
DEMPER + +S + G A R+F + NS T +++ G
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 217 -------------------------YAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRN 251
Y++ G A +F ++P K V+++ ++ N
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 252 KRFGDVVTLFHEMVS-RGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI 310
V ++F+ M P++V I+ACA L L G+++H +M F + +
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 311 GSSLIDMYAKCGSIDRSLLVFYKLQ-VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG 369
G++LIDMY+KC + +VF +L+ +NL WNS+I G+ +G + A+++F +++ +G
Sbjct: 269 GTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEG 328
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLS 421
++P+ T+ S+++ + G V E F M+ + P ++ C+ LLS
Sbjct: 329 LKPDSATWNSLISGFSQLGKVIEAFKFFERML-SVVMVPSLK---CLTSLLS 376
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 207/425 (48%), Gaps = 40/425 (9%)
Query: 32 ESVYANMIKTNANQDSFLMN---QFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHC 88
++ +IK L N F A C + + F ++ + N + +NALL +
Sbjct: 336 RQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYAN- 394
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
L+ +++ML+ G PT Y+FS+ +K+C + + +H + + G++ + +V
Sbjct: 395 KDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCV----TELQQLHSVIVRMGYEDNDYVL 450
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSA 208
++L+ Y+ L DA + D W + ++ V
Sbjct: 451 SSLMRSYAKNQLMNDALLLLD---------WASGPTSVV--------------------- 480
Query: 209 TWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRG 268
N + Y++ G + L + + D +SW + SR+ +V+ LF M+
Sbjct: 481 PLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSN 540
Query: 269 LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL-DVYIGSSLIDMYAKCGSIDRS 327
+ PD+ +++S C+ L L LG +H + F D ++ + LIDMY KCGSI
Sbjct: 541 IRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSV 600
Query: 328 LLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHA 387
+ VF + + KNL W ++I L HGY +EAL+ F E G +P+ V+F+S+LTAC H
Sbjct: 601 MKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHG 660
Query: 388 GFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGA 447
G V+EG F M +DY + P ++HY C VDLL++ G +++A +IR M F ++ +W
Sbjct: 661 GMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRT 719
Query: 448 LLSGC 452
L GC
Sbjct: 720 FLDGC 724
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 117/481 (24%), Positives = 204/481 (42%), Gaps = 66/481 (13%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
++LA F M N + +N +++ +A + +M G +P + S L+
Sbjct: 65 VSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSC 124
Query: 120 CTLLMDSAAGKTVHGHVWKRG-FDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA 178
+L D AG +HG K G F A FV T L+ Y L L A +VF++MP +
Sbjct: 125 ASL--DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLET 182
Query: 179 WTTMISAHVRCGEVDSAARLFDEMPERNSA------------------------------ 208
W M+S G + F E+ ++
Sbjct: 183 WNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSAT 242
Query: 209 ---------TWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVT 259
N++I Y K GN AE +F D++SW ++ ++++ +
Sbjct: 243 KKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALK 302
Query: 260 LFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYA 319
LF M G +P++ +V+ + + L G+++H L+ NG + +G++LID YA
Sbjct: 303 LFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYA 362
Query: 320 KCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVS 379
KCG+++ S L F ++ KN+ CWN+++ G A L +F +M + G RP TF +
Sbjct: 363 KCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFST 421
Query: 380 VLTACTHAGFVEEGRSRFVSM---IEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
L +C +++ S V M DY +S + Y +K L+ DAL ++
Sbjct: 422 ALKSCCVTE-LQQLHSVIVRMGYEDNDYVLSSLMRSY-------AKNQLMNDALLLLDWA 473
Query: 437 TFEPNSFIWGALLSG-----------CKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNM 485
+ P S + +++G KL LE + N+ I S S Y+ ++ +
Sbjct: 474 S-GPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIEL 532
Query: 486 Y 486
+
Sbjct: 533 F 533
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/544 (21%), Positives = 217/544 (39%), Gaps = 92/544 (16%)
Query: 48 FLMNQFIAAC--------TTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYV 99
F+ + F+ C + +A F M + +N ++ H + + +
Sbjct: 145 FMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFR 204
Query: 100 KMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLG 159
+++R G T SF ++K + + D K +H K+G D + V +L+ Y G
Sbjct: 205 ELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCG 264
Query: 160 LAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATW----- 210
A ++F + D +W +I A + A +LF MPE N T+
Sbjct: 265 NTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLG 324
Query: 211 ------------------------------NAMIDGYAKSGNIECAEILFNRMPCKDVIS 240
NA+ID YAK GN+E + + F+ + K+++
Sbjct: 325 VSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVC 384
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
W L++ Y+ NK ++LF +M+ G P E +T + +C + +++H ++
Sbjct: 385 WNALLSGYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKSCC----VTELQQLHSVIV 439
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVF----------------------------- 331
G+ + Y+ SSL+ YAK ++ +LL+
Sbjct: 440 RMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESV 499
Query: 332 ---YKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAG 388
L+ + WN I + Y +E +++F M + IRP+ TFVS+L+ C+
Sbjct: 500 KLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLC 559
Query: 389 FVEEGRS--RFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWG 446
+ G S ++ + C + + ++D+ K G I +++ T E N W
Sbjct: 560 DLTLGSSIHGLITKTDFSCADTFVCNV--LIDMYGKCGSIRSVMKVFEE-TREKNLITWT 616
Query: 447 ALLSGCKLHRNLEIANVAVQNLMIL--EPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKD 504
AL+S +H + A + + L +P + S+L KE + MKD
Sbjct: 617 ALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTAC-RHGGMVKEGMGLFQKMKD 675
Query: 505 LGVE 508
GVE
Sbjct: 676 YGVE 679
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 99/209 (47%), Gaps = 34/209 (16%)
Query: 174 RDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRM 233
+ + +IS + + GEV A ++FD+MPERN ++N +I GY+K G+++
Sbjct: 47 QPVYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVD--------- 97
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK 293
K +G +F EM G P++ ++ ++S CA L G
Sbjct: 98 ------------------KAWG----VFSEMRYFGYLPNQSTVSGLLS-CASLDVRA-GT 133
Query: 294 EVHHYLMVNG-FGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATH 352
++H + G F D ++G+ L+ +Y + ++ + VF + K+L WN M+ L
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHR 193
Query: 353 GYAKEALKMFSEMERKGIRPNGVTFVSVL 381
G+ KE + F E+ R G +F+ VL
Sbjct: 194 GFLKECMFFFRELVRMGASLTESSFLGVL 222
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 141/520 (27%), Positives = 247/520 (47%), Gaps = 47/520 (9%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
+N A F M + + +N ++ V C + + M R + PT ++FS L
Sbjct: 86 LNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL 145
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAH-VFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA 178
T + G+ +HG+ G + + V ++++ Y LG+ A VF M +RD +
Sbjct: 146 VTCV---RHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVS 202
Query: 179 WTTMISAHVRCGEVDSAARLFDEMPE---------------------------------- 204
W +I + G + A F M E
Sbjct: 203 WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCI 262
Query: 205 -----RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVT 259
NS A ID ++K ++ + LF + D + +++ YS + D +
Sbjct: 263 KMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALR 322
Query: 260 LFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYA 319
LF +++ + PD+ ++V+S+ + L G +VH ++ GF LD + +SL++MY
Sbjct: 323 LFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLGFDLDTAVATSLMEMYF 381
Query: 320 KCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM-ERKGIRPNGVTFV 378
K GS+D ++ VF K K+L WN++I GLA + A E+L +F+++ + ++P+ VT +
Sbjct: 382 KTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLM 441
Query: 379 SVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF 438
+L AC +AGFV EG F SM + + ++PG EHY C+++LL + G+I +A ++ + F
Sbjct: 442 GILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPF 501
Query: 439 EPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKI 498
EP+S IW +L + +A + ++ EP +S Y +L+ +Y RW+ K+
Sbjct: 502 EPSSHIWEPILCASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKL 561
Query: 499 RIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTSYGH 538
R AM + + K+ GSS + I + F A D GH
Sbjct: 562 RYAMNEHKL-KSAQGSSKISIESSVFSFEA-DQLQIHGGH 599
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 151/358 (42%), Gaps = 61/358 (17%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSY----------SFSSLVKACTL 122
P++L ++ L+ + A + ++L G V T+Y S++ A L
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
D T+ +V +G + G +A +FDEMPERD +W TM
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKN--------------GYLNNALDLFDEMPERDVVSWNTM 107
Query: 183 ISAHVRCGEVDSAARLFDEM-------------------------------------PER 205
IS V CG + R+F +M
Sbjct: 108 ISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRY 167
Query: 206 NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
N WN+++D Y + G + A +F M +DV+SW L+ S + + F M
Sbjct: 168 NLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMR 227
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
+ PDE ++ V+S C+ L L GK+ + GF + + + IDM++KC +D
Sbjct: 228 EMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLD 287
Query: 326 RSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTA 383
S+ +F +L+ + NSMI + H ++AL++F + +RP+ TF SVL++
Sbjct: 288 DSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSS 345
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 152/331 (45%), Gaps = 36/331 (10%)
Query: 107 VPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARK 166
+P+S FS LV L K VH + + GF V+TT
Sbjct: 1 MPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGF-----VRTT---------------- 39
Query: 167 VFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECA 226
+ + + + G V +A +LFD++P++N+ TWN + G K+G + A
Sbjct: 40 ----------YWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLFKNGYLNNA 89
Query: 227 EILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
LF+ MP +DV+SW T+++ + +F +M + P E + + S +
Sbjct: 90 LDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASL---V 146
Query: 287 GALGLGKEVHHYLMVNGFG-LDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSM 345
+ G+++H + +G ++ + +S++DMY + G D +L VF ++ +++ WN +
Sbjct: 147 TCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCL 206
Query: 346 IDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYC 405
I + G + AL F M I+P+ T V++ C+ + +G+ I+
Sbjct: 207 ILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGF 266
Query: 406 ISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
+S I G +D+ SK ++D++++ R +
Sbjct: 267 LSNSIV-LGAGIDMFSKCNRLDDSVKLFREL 296
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 9/168 (5%)
Query: 36 ANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRT-CVHCHRSHQA 94
+N I A D F + C ++ + F ++ ++++ N+++ + HC A
Sbjct: 268 SNSIVLGAGIDMF------SKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCC-GEDA 320
Query: 95 LACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEF 154
L ++ + V P ++FSS++ + +M G VH V K GFD V T+L+E
Sbjct: 321 LRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDH-GADVHSLVIKLGFDLDTAVATSLMEM 379
Query: 155 YSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM 202
Y G A VF + +D W T+I R + +F+++
Sbjct: 380 YFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQL 427
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/319 (30%), Positives = 177/319 (55%), Gaps = 5/319 (1%)
Query: 202 MPERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLF 261
+ E ++ N +I Y + +IE A +F + ++ SW +++ S+NK +V LF
Sbjct: 611 LRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLF 670
Query: 262 HEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKC 321
+ L P+E+ ++SA LG+ G + H +L+ GF + ++ ++L+DMY+ C
Sbjct: 671 RNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSC 727
Query: 322 GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG-IRPNGVTFVSV 380
G ++ + VF V ++ WNS+I HG ++A+++F E+ + PN +F+S+
Sbjct: 728 GMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISL 787
Query: 381 LTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEP 440
L+AC+H+GF++EG S + M E + + P EH +VD+L + G + +A E I G+
Sbjct: 788 LSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQ 847
Query: 441 NSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRI 500
+ +WGALLS C H + ++ + L +EP N+ YY L N Y + W+E ++R
Sbjct: 848 KAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRK 907
Query: 501 AMKDLGVEKTCPGSSWVEI 519
++D ++K PG S +++
Sbjct: 908 MVEDNALKKL-PGYSVIDV 925
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 203/465 (43%), Gaps = 66/465 (14%)
Query: 103 RNGVVPTSYSF-SSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLA 161
N + +S+ F ++++ + ++ ++VH K G + + L+ FY G
Sbjct: 79 ENRTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGEL 138
Query: 162 GDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER---------------- 205
+ +FDE+ E+D W +MI+A + G +A LF EM +
Sbjct: 139 VSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASAL 198
Query: 206 -----------------------NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWT 242
+S+ NA+++ YAK N+ AE +F M +D++SW
Sbjct: 199 SSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWN 258
Query: 243 TLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVN 302
T+MT N + F M G D V + VISAC+ + L LG+ +H ++ +
Sbjct: 259 TIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKS 318
Query: 303 GFGLD--VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALK 360
G+ + V +G+S+I MY+KCG + + VF +L +++ N++++G A +G +EA
Sbjct: 319 GYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFG 378
Query: 361 MFSEMER-KGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDL 419
+ ++M+ I+P+ T VS+ + C F EGR+ + S +E ++D+
Sbjct: 379 ILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDM 438
Query: 420 LSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSGYY 479
K GL A + + T HR+L N MI S +G+
Sbjct: 439 YGKCGLTTQAELLFKTTT-----------------HRDL-----VSWNSMISAFSQNGFT 476
Query: 480 SLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIH 524
N++ EV SK ++ L + +C S + + +H
Sbjct: 477 HKAKNLFKEVVSEYSCSKFSLSTV-LAILTSCDSSDSLIFGKSVH 520
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/494 (22%), Positives = 208/494 (42%), Gaps = 101/494 (20%)
Query: 39 IKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQAL 95
I+T DS L N + A ++ A F+HM++ + + +N ++ C+ ++L
Sbjct: 215 IETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSL 274
Query: 96 ACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGF--DAHVFVQTTLVE 153
+ M +G + +FS ++ AC+ + + G+++HG V K G+ +AHV V +++
Sbjct: 275 QYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIIS 334
Query: 154 FYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFD------------- 200
YS G A VF+E+ RD + +++ G + A + +
Sbjct: 335 MYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIA 394
Query: 201 ----------------------------EMPERNSATWNAMIDGYAKSGNIECAEILFNR 232
EM R N++ID Y K G AE+LF
Sbjct: 395 TVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKT 454
Query: 233 MPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTV---ISACAHLGAL 289
+D++SW ++++ +S+N LF E+VS + + +++TV +++C +L
Sbjct: 455 TTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE-YSCSKFSLSTVLAILTSCDSSDSL 513
Query: 290 GLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL-QVKNLFCWNSMIDG 348
GK VH +L K G + + L + + ++L WNS+I G
Sbjct: 514 IFGKSVHCWLQ-------------------KLGDLTSAFLRLETMSETRDLTSWNSVISG 554
Query: 349 LATHGYAKEALKMFSEMERKG-IRPNGVTFVSVLTACTHAGFVEEGR----------SRF 397
A+ G+ E+L+ F M R+G IR + +T + ++A + G V +GR
Sbjct: 555 CASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLREL 614
Query: 398 VSMIEDYCIS--------------------PGIEHYGCMVDLLSKGGLIEDALEMIRGMT 437
+ +++ I+ P + + C++ LS+ + ++ R +
Sbjct: 615 DTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNLK 674
Query: 438 FEPNSFIWGALLSG 451
EPN + LLS
Sbjct: 675 LEPNEITFVGLLSA 688
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/499 (23%), Positives = 214/499 (42%), Gaps = 42/499 (8%)
Query: 20 IKRCSKREKKTL-ESVYANMIKTNANQDSFLM--NQFIA---ACTTINLATHAFSHMDNP 73
I CS E+ TL ES++ +IK+ + ++ + N I+ C A F +
Sbjct: 296 ISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCR 355
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLR-NGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
+ + NA+L +A +M + + P + S+ C L S G+ V
Sbjct: 356 DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAV 415
Query: 133 HGHVWKRGFDAHVF-VQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGE 191
HG+ + + V ++++ Y GL A +F RD +W +MISA + G
Sbjct: 416 HGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGF 475
Query: 192 VDSAARLFDEMPERNSAT----------------WNAMIDGYA------KSGNIECAEIL 229
A LF E+ S + +++I G + K G++ A +
Sbjct: 476 THKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAFLR 535
Query: 230 FNRMP-CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRG-LAPDEVAMTTVISACAHLG 287
M +D+ SW ++++ + + + + F M G + D + + ISA +LG
Sbjct: 536 LETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLG 595
Query: 288 ALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMID 347
+ G+ H + + LD + ++LI MY +C I+ ++ VF + NL WN +I
Sbjct: 596 LVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVIS 655
Query: 348 GLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMI-EDYCI 406
L+ + +E ++F ++ + PN +TFV +L+A T G G +I +
Sbjct: 656 ALSQNKAGREVFQLFRNLK---LEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQA 712
Query: 407 SPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQ 466
+P + +VD+ S G++E +++ R S W +++S H E A +
Sbjct: 713 NPFVS--AALVDMYSSCGMLETGMKVFRNSGVNSIS-AWNSVISAHGFHGMGEKAMELFK 769
Query: 467 NLMI---LEPSNSGYYSLL 482
L +EP+ S + SLL
Sbjct: 770 ELSSNSEMEPNKSSFISLL 788
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 116/233 (49%), Gaps = 17/233 (7%)
Query: 167 VFDEMPERDAFAWTTMISAHVRCGEVDSA--ARLFDEMPE------------RNSATWNA 212
+FDE+PER+ TM S+ + +V + R E P ++ AT +
Sbjct: 71 LFDELPEREN---RTMESSFMFLRDVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSK 127
Query: 213 MIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPD 272
++ Y ++G + + LF+ + KDVI W +++T ++N R+ V LF EM+ +G D
Sbjct: 128 LLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFD 187
Query: 273 EVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFY 332
+ SA + L +H + G D + ++L+++YAK ++ + VF
Sbjct: 188 STTLLLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFT 247
Query: 333 KLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACT 385
++ +++ WN+++ +G+ +++L+ F M G + VTF V++AC+
Sbjct: 248 HMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 112/277 (40%), Gaps = 25/277 (9%)
Query: 39 IKTNANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQAL 95
IK+ D+ L N I C I A F + +PN +N ++ +
Sbjct: 608 IKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVF 667
Query: 96 ACYVKMLRN-GVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEF 154
++ RN + P +F L+ A T L ++ G H H+ +RGF A+ FV LV+
Sbjct: 668 ----QLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDM 723
Query: 155 YSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMP-----ERNSAT 209
YS G+ KVF AW ++ISAH G + A LF E+ E N ++
Sbjct: 724 YSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSS 783
Query: 210 WNAMIDGYAKSGNIECAEILFNRM-------PCKDVISWTTLMTCYSRNKRFGDVVTLFH 262
+ +++ + SG I+ + +M P + W M R G + +
Sbjct: 784 FISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDML-----GRAGKLREAYE 838
Query: 263 EMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
+ G ++SAC + G LGKEV L
Sbjct: 839 FITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVL 875
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/360 (30%), Positives = 186/360 (51%), Gaps = 39/360 (10%)
Query: 63 ATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL 122
A F M + + +NA+L + AL + MLR GV P ++ ++ AC+
Sbjct: 217 ARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSF 276
Query: 123 LMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTM 182
D + +++ + ++ + FV+T L++
Sbjct: 277 RADPSLTRSLVKLIDEKRVRLNCFVKTALLDM---------------------------- 308
Query: 183 ISAHVRCGEVDSAARLFDEM-PERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISW 241
H +C ++ SA R+F+E+ +RN TWNAMI GY + G++ A LF+ MP ++V+SW
Sbjct: 309 ---HAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSW 365
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLA-PDEVAMTTVISACAHLGALGLGKEVHHYLM 300
+L+ Y+ N + + F +M+ G + PDEV M +V+SAC H+ L LG + Y+
Sbjct: 366 NSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIR 425
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALK 360
N L+ SLI MYA+ G++ + VF +++ +++ +N++ A +G E L
Sbjct: 426 KNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLN 485
Query: 361 MFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLL 420
+ S+M+ +GI P+ VT+ SVLTAC AG ++EG+ F S+ +P +HY CM DLL
Sbjct: 486 LLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSI-----RNPLADHYACM-DLL 539
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 118/444 (26%), Positives = 208/444 (46%), Gaps = 44/444 (9%)
Query: 31 LESVYANMIKTNA-NQDSFLMNQFIAACTTINLATH----AFSHMDNPNALVYNALLRTC 85
L ++A +I N+ + S+ ++ I+ CT + ++ F + PN V N++ +
Sbjct: 22 LNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVFVVNSMFKYF 81
Query: 86 VHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHV 145
++ L Y + R G++P ++SF ++K+ G V K GF
Sbjct: 82 SKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRF-----GILFQALVEKLGFFKDP 136
Query: 146 FVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER 205
+V+ +++ Y ARKVFD++ +R W MIS + + G + A +LFD MPE
Sbjct: 137 YVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPEN 196
Query: 206 NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
+ +W MI G+AK ++E A F+RMP K V+SW +++ Y++N D + LF++M+
Sbjct: 197 DVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDML 256
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
G+ P+E VISAC+ L + + + L+ ++ ++L+DM+AKC I
Sbjct: 257 RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQ 316
Query: 326 RSLLVFYKLQV-KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGI-------------- 370
+ +F +L +NL WN+MI G G A ++F M ++ +
Sbjct: 317 SARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNG 376
Query: 371 ------------------RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH 412
+P+ VT +SVL+AC H +E G V I I
Sbjct: 377 QAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDC-IVDYIRKNQIKLNDSG 435
Query: 413 YGCMVDLLSKGGLIEDALEMIRGM 436
Y ++ + ++GG + +A + M
Sbjct: 436 YRSLIFMYARGGNLWEAKRVFDEM 459
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 110/236 (46%), Gaps = 15/236 (6%)
Query: 12 LKDKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTI---NLATHAFS 68
+K +LD +C R+ ++ ++ N + T N ++ N I+ T I + A F
Sbjct: 301 VKTALLDMHAKC--RDIQSARRIF-NELGTQRNLVTW--NAMISGYTRIGDMSSARQLFD 355
Query: 69 HMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNG-VVPTSYSFSSLVKACTLLMDSA 127
M N + +N+L+ H ++ A+ + M+ G P + S++ AC + D
Sbjct: 356 TMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLE 415
Query: 128 AGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHV 187
G + ++ K + +L+ Y+ G +A++VFDEM ERD ++ T+ +A
Sbjct: 416 LGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFA 475
Query: 188 RCGE----VDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFN--RMPCKD 237
G+ ++ +++ DE E + T+ +++ ++G ++ + +F R P D
Sbjct: 476 ANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIRNPLAD 531
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 190/405 (46%), Gaps = 44/405 (10%)
Query: 23 CSKREKKTL-ESVYANMIKTNANQ---DSFLMNQFIAACTTINLATHAFSHMDNPNALVY 78
CS+R + L V+ NM+K +S L+ F A C + A AF M+ + + +
Sbjct: 194 CSRRAEFELGRQVHGNMVKVGVGNLIVESSLV-YFYAQCGELTSALRAFDMMEEKDVISW 252
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWK 138
A++ C +A+ ++ ML + +P ++ S++KAC+ G+ VH V K
Sbjct: 253 TAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVK 312
Query: 139 RGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARL 198
R VFV T+L++ Y+ G D RKVFD M R+ WT++I+AH R G + A L
Sbjct: 313 RMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISL 372
Query: 199 FDEMPER----------------------------------NSATWNAMIDG-----YAK 219
F M R NS N I Y K
Sbjct: 373 FRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCK 432
Query: 220 SGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTV 279
G A + ++P +DV+SWT +++ S + + EM+ G+ P+ ++
Sbjct: 433 CGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSA 492
Query: 280 ISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL 339
+ ACA+ +L +G+ +H N +V++GS+LI MYAKCG + + VF + KNL
Sbjct: 493 LKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNL 552
Query: 340 FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
W +MI G A +G+ +EALK+ ME +G + F ++L+ C
Sbjct: 553 VSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 219/466 (46%), Gaps = 46/466 (9%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFIAACTTIN---LATHAFSHMDNPNALVYNALLRTC 85
+ ++ ++A +K +Q + N I++C + A F M N + + A++
Sbjct: 99 RLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGY 158
Query: 86 VHCHRSHQALACYVKMLRNGVVPTSYS-FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
+ +A A + +++G+ T+ F L+ C+ + G+ VHG++ K G +
Sbjct: 159 LKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGV-GN 217
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLF----- 199
+ V+++LV FY+ G A + FD M E+D +WT +ISA R G A +F
Sbjct: 218 LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLN 277
Query: 200 ----------------------------------DEMPERNSATWNAMIDGYAKSGNIEC 225
M + + +++D YAK G I
Sbjct: 278 HWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISD 337
Query: 226 AEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAH 285
+F+ M ++ ++WT+++ ++R + ++LF M R L + + + +++ AC
Sbjct: 338 CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGS 397
Query: 286 LGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSM 345
+GAL LGKE+H ++ N +VYIGS+L+ +Y KCG + V +L +++ W +M
Sbjct: 398 VGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAM 457
Query: 346 IDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYC 405
I G ++ G+ EAL EM ++G+ PN T+ S L AC ++ + GRS +++
Sbjct: 458 ISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHA 517
Query: 406 ISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSG 451
+S + ++ + +K G + +A + M E N W A++ G
Sbjct: 518 LS-NVFVGSALIHMYAKCGFVSEAFRVFDSMP-EKNLVSWKAMIMG 561
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 167/362 (46%), Gaps = 41/362 (11%)
Query: 130 KTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRC 189
K +H K D ++ L+ LG ARKVFD MPE++ WT MI +++
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 190 GEVDSAARLFDE--------MPER-------------------------------NSATW 210
G D A LF++ ER N
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLIVE 221
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
++++ YA+ G + A F+ M KDVISWT +++ SR + +F M++
Sbjct: 222 SSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFL 281
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
P+E + +++ AC+ AL G++VH ++ DV++G+SL+DMYAKCG I V
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 331 FYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
F + +N W S+I A G+ +EA+ +F M+R+ + N +T VS+L AC G +
Sbjct: 342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGAL 401
Query: 391 EEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLS 450
G+ +I++ I + +V L K G DA +++ + + W A++S
Sbjct: 402 LLGKELHAQIIKN-SIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMIS 459
Query: 451 GC 452
GC
Sbjct: 460 GC 461
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 132/311 (42%), Gaps = 45/311 (14%)
Query: 20 IKRCSKRE-----KKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPN 74
+K CS+ + ++ V MIKT+ + LM+ + A C I+ F M N N
Sbjct: 291 LKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMY-AKCGEISDCRKVFDGMSNRN 349
Query: 75 ALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHG 134
+ + +++ +A++ + M R ++ + + S+++AC + GK +H
Sbjct: 350 TVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHA 409
Query: 135 HVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDS 194
+ K + +V++ +TLV Y G + DA V ++P RD +WT MIS G
Sbjct: 410 QIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESE 469
Query: 195 AARLFDEM----------------------------------PERNSATWN-----AMID 215
A EM ++N A N A+I
Sbjct: 470 ALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIH 529
Query: 216 GYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVA 275
YAK G + A +F+ MP K+++SW ++ Y+RN + + L + M + G D+
Sbjct: 530 MYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYI 589
Query: 276 MTTVISACAHL 286
T++S C +
Sbjct: 590 FATILSTCGDI 600
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 168/301 (55%), Gaps = 2/301 (0%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
N++I Y++ ++ A I+F ++ + +W ++++ ++ N+R + L EM+ G
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI-GSSLIDMYAKCGSIDRSLL 329
P+ + + +++ A +G L GKE H Y++ D I +SL+DMYAK G I +
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 330 VFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGF 389
VF ++ ++ + S+IDG G + AL F +M+R GI+P+ VT V+VL+AC+H+
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540
Query: 390 VEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALL 449
V EG F M + I +EHY CMVDL + G ++ A ++ + +EP+S + LL
Sbjct: 541 VREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLL 600
Query: 450 SGCKLHRNLEIANVAVQNLMI-LEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVE 508
C +H N I A L++ +P + G+Y LL +MYA W ++ ++ + DLGV+
Sbjct: 601 KACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQ 660
Query: 509 K 509
K
Sbjct: 661 K 661
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 193/415 (46%), Gaps = 42/415 (10%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNP---NALVYNALLRTCVHC 88
+ ++A+ I + DS L+ + + + NL A + +N + L +N L+ + +
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRN 162
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
R ++++ Y +M+ G+ +++ S++KAC L+D A G+ VHG + +++V
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVC 222
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM----PE 204
L+ Y G AR++FD M ERDA +W +I+ + ++ A +L D M E
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 205 RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM 264
+ TWN + G ++GN A + C + C N R G
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGA------LNCV-----VGMRNC---NVRIGS-------- 320
Query: 265 VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVN--GFGLDV-YIGSSLIDMYAKC 321
VAM + AC+H+GAL GK V H L++ F D+ + +SLI MY++C
Sbjct: 321 ---------VAMINGLKACSHIGALKWGK-VFHCLVIRSCSFSHDIDNVRNSLITMYSRC 370
Query: 322 GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
+ + +VF +++ +L WNS+I G A + ++E + EM G PN +T S+L
Sbjct: 371 SDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASIL 430
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
G ++ G+ ++ + + +VD+ +K G I A + M
Sbjct: 431 PLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 141/346 (40%), Gaps = 58/346 (16%)
Query: 43 ANQDSFLMNQFIAACTTINLATHAFSHMD-------NPNALVYNALLRTCVHCHRSHQAL 95
+ +D+ N I T+ AF +D + + +N + C+ AL
Sbjct: 246 SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGAL 305
Query: 96 ACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVF--VQTTLVE 153
C V M V S + + +KAC+ + GK H V + +H V+ +L+
Sbjct: 306 NCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLIT 365
Query: 154 FYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM----------- 202
YS A VF ++ W ++IS + + L EM
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 203 -----P-------------------ERNSAT-----WNAMIDGYAKSGNIECAEILFNRM 233
P R S WN+++D YAKSG I A+ +F+ M
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK 293
+D +++T+L+ Y R + + F +M G+ PD V M V+SAC+H + G
Sbjct: 486 RKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREG- 544
Query: 294 EVHHYL---MVNGFGLDVYIG--SSLIDMYAKCGSIDRSLLVFYKL 334
H+L M + FG+ + + S ++D+Y + G +D++ +F+ +
Sbjct: 545 ---HWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 13/284 (4%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSL 116
C+ + A F ++ + +N+++ + RS + +ML +G P + +S+
Sbjct: 370 CSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASI 429
Query: 117 VKACTLLMDSAAGKTVHGHVWKR-GFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD 175
+ + + GK H ++ +R + + + +LV+ Y+ G A++VFD M +RD
Sbjct: 430 LPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRD 489
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEILFN 231
+T++I + R G+ + A F +M + + T A++ + S + LF
Sbjct: 490 KVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFT 549
Query: 232 RMPCKDVIS-----WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
+M I ++ ++ Y R +FH + P T++ AC
Sbjct: 550 KMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI---PYEPSSAMCATLLKACLIH 606
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
G +G+ L++ + L DMYA GS + + V
Sbjct: 607 GNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTV 650
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 185 bits (470), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 168/301 (55%), Gaps = 2/301 (0%)
Query: 211 NAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
N++I Y++ ++ A I+F ++ + +W ++++ ++ N+R + L EM+ G
Sbjct: 361 NSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH 420
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI-GSSLIDMYAKCGSIDRSLL 329
P+ + + +++ A +G L GKE H Y++ D I +SL+DMYAK G I +
Sbjct: 421 PNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKR 480
Query: 330 VFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGF 389
VF ++ ++ + S+IDG G + AL F +M+R GI+P+ VT V+VL+AC+H+
Sbjct: 481 VFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNL 540
Query: 390 VEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALL 449
V EG F M + I +EHY CMVDL + G ++ A ++ + +EP+S + LL
Sbjct: 541 VREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLL 600
Query: 450 SGCKLHRNLEIANVAVQNLMI-LEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVE 508
C +H N I A L++ +P + G+Y LL +MYA W ++ ++ + DLGV+
Sbjct: 601 KACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQ 660
Query: 509 K 509
K
Sbjct: 661 K 661
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 193/415 (46%), Gaps = 42/415 (10%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNP---NALVYNALLRTCVHC 88
+ ++A+ I + DS L+ + + + NL A + +N + L +N L+ + +
Sbjct: 103 QQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRN 162
Query: 89 HRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
R ++++ Y +M+ G+ +++ S++KAC L+D A G+ VHG + +++V
Sbjct: 163 KRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVC 222
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM----PE 204
L+ Y G AR++FD M ERDA +W +I+ + ++ A +L D M E
Sbjct: 223 NALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVE 282
Query: 205 RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEM 264
+ TWN + G ++GN A + C + C N R G
Sbjct: 283 ASIVTWNTIAGGCLEAGNYIGA------LNCV-----VGMRNC---NVRIGS-------- 320
Query: 265 VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVN--GFGLDV-YIGSSLIDMYAKC 321
VAM + AC+H+GAL GK V H L++ F D+ + +SLI MY++C
Sbjct: 321 ---------VAMINGLKACSHIGALKWGK-VFHCLVIRSCSFSHDIDNVRNSLITMYSRC 370
Query: 322 GSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
+ + +VF +++ +L WNS+I G A + ++E + EM G PN +T S+L
Sbjct: 371 SDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASIL 430
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
G ++ G+ ++ + + +VD+ +K G I A + M
Sbjct: 431 PLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 141/346 (40%), Gaps = 58/346 (16%)
Query: 43 ANQDSFLMNQFIAACTTINLATHAFSHMD-------NPNALVYNALLRTCVHCHRSHQAL 95
+ +D+ N I T+ AF +D + + +N + C+ AL
Sbjct: 246 SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGAL 305
Query: 96 ACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVF--VQTTLVE 153
C V M V S + + +KAC+ + GK H V + +H V+ +L+
Sbjct: 306 NCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLIT 365
Query: 154 FYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM----------- 202
YS A VF ++ W ++IS + + L EM
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 203 -----P-------------------ERNSAT-----WNAMIDGYAKSGNIECAEILFNRM 233
P R S WN+++D YAKSG I A+ +F+ M
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK 293
+D +++T+L+ Y R + + F +M G+ PD V M V+SAC+H + G
Sbjct: 486 RKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREG- 544
Query: 294 EVHHYL---MVNGFGLDVYIG--SSLIDMYAKCGSIDRSLLVFYKL 334
H+L M + FG+ + + S ++D+Y + G +D++ +F+ +
Sbjct: 545 ---HWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI 587
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 13/284 (4%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSL 116
C+ + A F ++ + +N+++ + RS + +ML +G P + +S+
Sbjct: 370 CSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASI 429
Query: 117 VKACTLLMDSAAGKTVHGHVWKR-GFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD 175
+ + + GK H ++ +R + + + +LV+ Y+ G A++VFD M +RD
Sbjct: 430 LPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRD 489
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEILFN 231
+T++I + R G+ + A F +M + + T A++ + S + LF
Sbjct: 490 KVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFT 549
Query: 232 RMPCKDVIS-----WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
+M I ++ ++ Y R +FH + P T++ AC
Sbjct: 550 KMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTI---PYEPSSAMCATLLKACLIH 606
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
G +G+ L++ + L DMYA GS + + V
Sbjct: 607 GNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTV 650
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 108/417 (25%), Positives = 189/417 (45%), Gaps = 41/417 (9%)
Query: 57 CTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKML-RNGVVPTSYSFSS 115
C + LA F + + +V+ A++ H R +AL + M+ + P S ++
Sbjct: 262 CGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTT 321
Query: 116 LVKACTLLMDSAAGKTVHGHVWK-RGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER 174
++ + GK VH HV K + + FV + L++ Y G R+VF +R
Sbjct: 322 ILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQR 381
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPER----------------------------- 205
+A +WT ++S + G D A R M +
Sbjct: 382 NAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIH 441
Query: 206 ----------NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFG 255
N + +++ Y+K G E LF+R+ ++V +WT ++ CY N
Sbjct: 442 CYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLR 501
Query: 256 DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLI 315
+ +F M+ PD V M V++ C+ L AL LGKE+H +++ F ++ + +I
Sbjct: 502 AGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARII 561
Query: 316 DMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGV 375
MY KCG + + F + VK W ++I+ + ++A+ F +M +G PN
Sbjct: 562 KMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTF 621
Query: 376 TFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM 432
TF +VL+ C+ AGFV+E F M+ Y + P EHY +++LL++ G +E+A +
Sbjct: 622 TFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 143/538 (26%), Positives = 223/538 (41%), Gaps = 85/538 (15%)
Query: 46 DSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVHC--HRSHQALACYVK 100
+ FL + + AC ++ A F + N +NALLR V R L+ + +
Sbjct: 145 NEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTE 204
Query: 101 MLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGL 160
M GV YS S++ K+ G H K G VF++T+LV+ Y G
Sbjct: 205 MRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGK 264
Query: 161 AGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNA-------- 212
G AR+VFDE+ ERD W MI+ A LF M N+
Sbjct: 265 VGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILP 324
Query: 213 ---------------------------------MIDGYAKSGNIECAEILFNRMPCKDVI 239
+ID Y K G++ +F ++ I
Sbjct: 325 VLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAI 384
Query: 240 SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
SWT LM+ Y+ N RF + M G PD V + TV+ CA L A+ GKE+H Y
Sbjct: 385 SWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYA 444
Query: 300 MVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEAL 359
+ N F +V + +SL+ MY+KCG + + +F +L+ +N+ W +MID + + +
Sbjct: 445 LKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGI 504
Query: 360 KMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED------YCISPGIEHY 413
++F M RP+ VT VLT C+ ++ G+ +++ + + I+ Y
Sbjct: 505 EVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMY 564
Query: 414 GCMVDLLS----------KGG--------------LIEDALEMIRGMT---FEPNSFIWG 446
G DL S KG L DA+ M F PN+F +
Sbjct: 565 GKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFT 624
Query: 447 ALLSGCKLHRNLEIANVAVQNLMI----LEPSNSGYYSLLVNMYAEVNRWKEVSKIRI 500
A+LS C ++ A NLM+ L+PS +YSL++ + R +E ++ +
Sbjct: 625 AVLSICSQAGFVDEA-YRFFNLMLRMYNLQPSEE-HYSLVIELLNRCGRVEEAQRLAV 680
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 184/405 (45%), Gaps = 49/405 (12%)
Query: 103 RNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAG 162
+ G+ + +FS+L++AC GK VH H+ G +++ F++T LV Y+ G
Sbjct: 104 QRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVK 163
Query: 163 DARKVFDEMPERDAFAWTTMISAHVRCGE--VDSAARLFDEMPE---------------- 204
DA+KVFDE + ++W ++ V G+ F EM E
Sbjct: 164 DAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKS 223
Query: 205 -------RNSATWNAM----------------IDGYAKSGNIECAEILFNRMPCKDVISW 241
R +A+ +D Y K G + A +F+ + +D++ W
Sbjct: 224 FAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVW 283
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSR-GLAPDEVAMTTVISACAHLGALGLGKEVH-HYL 299
++ + NKR + + LF M+S + P+ V +TT++ + AL LGKEVH H L
Sbjct: 284 GAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVL 343
Query: 300 MVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEAL 359
+ ++ S LID+Y KCG + VFY + +N W +++ G A +G +AL
Sbjct: 344 KSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQAL 403
Query: 360 KMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDL 419
+ M+++G RP+ VT +VL C +++G+ +++ + P + ++ +
Sbjct: 404 RSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFL-PNVSLVTSLMVM 462
Query: 420 LSKGGLIEDALEMIRGMTFEPNSFIWGALL----SGCKLHRNLEI 460
SK G+ E + + + + N W A++ C L +E+
Sbjct: 463 YSKCGVPEYPIRLFDRLE-QRNVKAWTAMIDCYVENCDLRAGIEV 506
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 144/343 (41%), Gaps = 50/343 (14%)
Query: 32 ESVYANMIKT-NANQDSFLMNQFI---AACTTINLATHAFSHMDNPNALVYNALLRTCVH 87
+ V+A+++K+ N + F+ + I C + F NA+ + AL+
Sbjct: 336 KEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAA 395
Query: 88 CHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFV 147
R QAL V M + G P + ++++ C L GK +H + K F +V +
Sbjct: 396 NGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSL 455
Query: 148 QTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEM----- 202
T+L+ YS G+ ++FD + +R+ AWT MI +V ++ + +F M
Sbjct: 456 VTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKH 515
Query: 203 --------------------------------PERNSATWNA--MIDGYAKSGNIECAEI 228
E S + + +I Y K G++ A
Sbjct: 516 RPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANF 575
Query: 229 LFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA 288
F+ + K ++WT ++ Y N+ F D + F +MVSRG P+ T V+S C+ G
Sbjct: 576 SFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGF 635
Query: 289 LGLGKEVHHY--LMVNGFGLDVYIG--SSLIDMYAKCGSIDRS 327
+ E + + LM+ + L S +I++ +CG ++ +
Sbjct: 636 V---DEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 4/206 (1%)
Query: 248 YSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLD 307
++R +T+ + RG+ + + ++ AC +L GK+VH ++ +NG +
Sbjct: 86 FARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESN 145
Query: 308 VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAK--EALKMFSEM 365
++ + L+ MY CGS+ + VF + N++ WN+++ G G + + L F+EM
Sbjct: 146 EFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEM 205
Query: 366 ERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGL 425
G+ N + +V + A + +G I++ + + +VD+ K G
Sbjct: 206 RELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFN-SVFLKTSLVDMYFKCGK 264
Query: 426 IEDALEMIRGMTFEPNSFIWGALLSG 451
+ A + + E + +WGA+++G
Sbjct: 265 VGLARRVFDEIV-ERDIVVWGAMIAG 289
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 120/214 (56%)
Query: 263 EMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG 322
E++ +G PD + +CA+L +L K+VH + + + F D + + +I M+ +C
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 323 SIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLT 382
SI + VF + K++ W+ M+ + +G +AL +F EM + G++PN TF++V
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 383 ACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNS 442
AC G +EE F SM ++ ISP EHY ++ +L K G + +A + IR + FEP +
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 443 FIWGALLSGCKLHRNLEIANVAVQNLMILEPSNS 476
W A+ + +LH ++++ + + ++ ++PS +
Sbjct: 406 DFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKA 439
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 22/164 (13%)
Query: 160 LAGDARKVFDE--MPERDAFAWTTMISAHVRCGEVDSAARLFDEMPE---RNSATWNAM- 213
L DA ++ D+ MP+R+ F A+++ ++ + ++ D + R N M
Sbjct: 220 LYKDAIELLDKGAMPDRECFVLLFESCANLKS--LEHSKKVHDHFLQSKFRGDPKLNNMV 277
Query: 214 IDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDE 273
I + + +I A+ +F+ M KD+ SW +M YS N D + LF EM GL P+E
Sbjct: 278 ISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNE 337
Query: 274 VAMTTVISACAHLGAL--------------GLGKEVHHYLMVNG 303
TV ACA +G + G+ + HYL V G
Sbjct: 338 ETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLG 381
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 66/149 (44%), Gaps = 4/149 (2%)
Query: 99 VKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSML 158
+++L G +P F L ++C L K VH H + F + ++ +
Sbjct: 225 IELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGEC 284
Query: 159 GLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMI 214
DA++VFD M ++D +W M+ A+ G D A LF+EM + N T+ +
Sbjct: 285 SSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVF 344
Query: 215 DGYAKSGNIECAEILFNRMPCKDVISWTT 243
A G IE A + F+ M + IS T
Sbjct: 345 LACATVGGIEEAFLHFDSMKNEHGISPKT 373
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 192/428 (44%), Gaps = 52/428 (12%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVK- 118
+ L F PN + +N L+ +++ +A+A +M+ G P +++ ++V
Sbjct: 170 VALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 229
Query: 119 ---------ACTLLMDSAAGK-------------------------TVHGHVWKRGFDAH 144
A +LL GK + + +G +
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFD 200
V +L+ G DA ++ +M ER + ++ +I A V+ G++ A +L+D
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 201 EMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKD----VISWTTLMTCYSRNK 252
EM +R + T++++I+G+ ++ A+ +F M KD V+++ TL+ + + K
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
R + + LF EM RGL + V T+I G + +++ ++ +G D+ S
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 469
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
L+D K G ++++L+VF LQ +++ +N MI+G+ G ++ +F + K
Sbjct: 470 ILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIED 428
G++PN + + ++++ G EE + F M ED + P Y ++ + G
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL-PNSGTYNTLIRARLRDGDKAA 588
Query: 429 ALEMIRGM 436
+ E+I+ M
Sbjct: 589 SAELIKEM 596
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 158/385 (41%), Gaps = 50/385 (12%)
Query: 23 CSKREKKTLESVYANMIKTNANQDSFLMNQFIAAC---TTINLATHAFSHMDN----PNA 75
C + + S+ M K D + I A +N A + F+ MDN PN
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 76 LVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGH 135
+ YN+L+R + R A M+ + P +FS+L+ A + ++
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 136 VWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAF----AWTTMISAHVRCGE 191
+ KR D +F ++L+ + M +A+ +F+ M +D F + T+I +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 192 VDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTC 247
V+ LF EM +R N+ T+N +I G ++G+ + A+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQ-------------------- 450
Query: 248 YSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLD 307
+F +MVS G+ PD + + ++ G L V YL + D
Sbjct: 451 -----------KIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 308 VYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALKMFS 363
+Y + +I+ K G ++ +F L +K N+ + +MI G G +EA +F
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 364 EMERKGIRPNGVTFVSVLTACTHAG 388
EM+ G PN T+ +++ A G
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDG 584
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/436 (22%), Positives = 181/436 (41%), Gaps = 56/436 (12%)
Query: 73 PNALVYNALLRTCVH---------------------------------CHRSHQALACYV 99
P+ + +N LL C RS LA V
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 100 --KMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSM 157
KM++ G P + SSL+ + + ++ + + TL+ +
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 158 LGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSAT 209
A +A + D M R D F + T+++ + G++D A L +M E +
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 210 WNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
+ +ID N+ A LF M K +V+++ +L+ C R+ D L +M+
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
R + P+ V + +I A G L ++++ ++ D++ SSLI+ + +D
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 326 RSLLVFYKLQVKNLF----CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
+ +F + K+ F +N++I G +E +++F EM ++G+ N VT+ +++
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL---EMIRGMTF 438
AG + + F M+ D + P I Y ++D L K G +E AL E ++
Sbjct: 438 QGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 439 EPNSFIWGALLSG-CK 453
EP+ + + ++ G CK
Sbjct: 497 EPDIYTYNIMIEGMCK 512
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 178/429 (41%), Gaps = 57/429 (13%)
Query: 78 YNALLRTCVHCHRSHQALACYV--KMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGH 135
YN L+ C RS LA V KM++ G P + SSL+ + +
Sbjct: 118 YNILINC--FCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 136 VWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGE 191
++ + + TL+ + A +A + D M R D F + T+++ + G+
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 192 VDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTT 243
+D A L +M E + + +ID N+ A LF M K +V+++ +
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 244 LMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNG 303
L+ C R+ D L +M+ R + P+ V + +I A G L ++++ ++
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 304 FGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLF----CWNSMIDGLATHGYAKEAL 359
D++ SSLI+ + +D + +F + K+ F +N++I G +E +
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 360 KMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED--------YCI----- 406
++F EM ++G+ N VT+ +++ AG + + F M+ D Y I
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 407 ---------------------SPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF---EPNS 442
P I Y M++ + K G +ED ++ ++ +PN
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 535
Query: 443 FIWGALLSG 451
I+ ++SG
Sbjct: 536 IIYTTMISG 544
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 162/355 (45%), Gaps = 27/355 (7%)
Query: 163 DARKVFDEM----PERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSA----TWNAMI 214
DA +F EM P + ++SA + + D L + M + ++N +I
Sbjct: 63 DAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILI 122
Query: 215 DGYAKSGNIECAEILFNRM------PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRG 268
+ + + + A + +M P D+++ ++L+ Y KR + V L +M
Sbjct: 123 NCFCRRSQLPLALAVLGKMMKLGYEP--DIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 269 LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSL 328
P+ V T+I + ++ G D++ ++++ K G ID +L
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 329 LVFYKLQV----KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
+ K++ ++ + ++ID L + +AL +F+EM+ KGIRPN VT+ S++
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 385 THAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM---TFEPN 441
+ G + SR +S + + I+P + + ++D K G + +A ++ M + +P+
Sbjct: 301 CNYGRWSDA-SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMILEP--SNSGYYSLLVNMYAEVNRWKE 494
F + +L++G +H L+ A + LMI + N Y+ L+ + + R +E
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLIKGFCKAKRVEE 413
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 193/427 (45%), Gaps = 24/427 (5%)
Query: 33 SVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMD-------NPNALVYNALLRTC 85
S+ M++ DSF N I N A+ A + +D P+ + Y ++
Sbjct: 172 SLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGL 231
Query: 86 VHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHV 145
AL+ KM + + P +++++ A + + + +G +V
Sbjct: 232 CKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 146 FVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDE 201
+L+ G DA ++ +M ER + ++ +I A V+ G++ A +L+DE
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 202 MPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKD----VISWTTLMTCYSRNKR 253
M +R + T++++I+G+ ++ A+ +F M KD V+++ TL+ + + KR
Sbjct: 352 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 411
Query: 254 FGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSS 313
+ + LF EM RGL + V TT+I + V ++ +G D+ S
Sbjct: 412 VDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 314 LIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALKMFSEMERKG 369
L+D G ++ +L+VF LQ +++ +N MI+G+ G ++ +F + KG
Sbjct: 472 LLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDA 429
++PN VT+ ++++ G EE + F M E+ + P Y ++ + G +
Sbjct: 532 VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAAS 590
Query: 430 LEMIRGM 436
E+IR M
Sbjct: 591 AELIREM 597
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 155/363 (42%), Gaps = 55/363 (15%)
Query: 60 INLATHAFSHMDN----PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSS 115
+N A + F+ MDN PN + YN+L+R + R A M+ + P +FS+
Sbjct: 272 VNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSA 331
Query: 116 LVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD 175
L+ A + ++ + KR D +F ++L+ + M +A+ +F+ M +D
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 176 AF----AWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAE 227
F + T+I + VD LF EM +R N+ T+ +I G+ ++ + A+
Sbjct: 392 CFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQ 451
Query: 228 ILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLG 287
I +F +MVS G+ PD + + ++ + G
Sbjct: 452 I-------------------------------VFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 288 ALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWN 343
+ V YL + D+Y + +I+ K G ++ +F L +K N+ +
Sbjct: 481 KVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYT 540
Query: 344 SMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTA-------CTHAGFVEEGRS- 395
+M+ G G +EA +F EM+ +G P+ T+ +++ A A + E RS
Sbjct: 541 TMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSC 600
Query: 396 RFV 398
RFV
Sbjct: 601 RFV 603
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 99/480 (20%), Positives = 195/480 (40%), Gaps = 62/480 (12%)
Query: 33 SVYANMIKTNANQDSFLMNQFIAACTTIN---LATHAFSHMDN---PNALVYNALLRTCV 86
+++ +M+K+ ++ ++A +N L M N + L ++L C
Sbjct: 67 NLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINC- 125
Query: 87 HCHRSHQ--ALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
C RS ALA KM++ G P + +SL+ + ++ G + + G+
Sbjct: 126 FCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPD 185
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMP----ERDAFAWTTMISAHVRCGEVDSAARLFD 200
F TL+ A +A + D M + D + +++ + G++D A L
Sbjct: 186 SFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLK 245
Query: 201 EMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNK 252
+M E +N +ID N+ A LF M K +V+++ +L+ C
Sbjct: 246 KMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYG 305
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
R+ D L +M+ R + P+ V + +I A G L ++++ ++ D++ S
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVKNLF----CWNSMIDGLATHGYAKEALKMFSEMERK 368
SLI+ + +D + +F + K+ F +N++I G E +++F EM ++
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED--------YCI-------------- 406
G+ N VT+ +++ A + + F M+ D Y I
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 407 ------------SPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF---EPNSFIWGALLSG 451
P I Y M++ + K G +ED ++ ++ +PN + ++SG
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 162/353 (45%), Gaps = 23/353 (6%)
Query: 163 DARKVFDEMPERDAFA----WTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMI 214
DA +F +M + F ++ ++SA + + D L ++M N T++ +I
Sbjct: 64 DAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILI 123
Query: 215 DGYAKSGNIECAEILFNRMPC----KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
+ + + + A + +M D+++ +L+ + R D V+L +MV G
Sbjct: 124 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQ 183
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
PD T+I + ++V G D+ +++ K G ID +L +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 331 FYKLQVKNL----FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
K++ + +N++ID L + +AL +F+EM+ KGIRPN VT+ S++ +
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 387 AGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM---TFEPNSF 443
G + SR +S + + I+P + + ++D K G + +A ++ M + +P+ F
Sbjct: 304 YGRWSDA-SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 362
Query: 444 IWGALLSGCKLHRNLEIANVAVQNLMILEP--SNSGYYSLLVNMYAEVNRWKE 494
+ +L++G +H L+ A + LMI + N Y+ L+ + + R E
Sbjct: 363 TYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 180/416 (43%), Gaps = 37/416 (8%)
Query: 57 CTTINLATHAFSHMDNP----NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYS 112
C ++LA A+S M N + ++ R + +A + +M+ G +P + +
Sbjct: 426 CDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTST 485
Query: 113 FSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP 172
+S ++ + + + G A V+ T +V+ + GL ARK F+EM
Sbjct: 486 YSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMR 545
Query: 173 E----RDAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIE 224
E + +T +I A+++ +V A LF+ M N T++A+IDG+ K+G +E
Sbjct: 546 EVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVE 605
Query: 225 CAEILFNRM------PCKD--------------VISWTTLMTCYSRNKRFGDVVTLFHEM 264
A +F RM P D V+++ L+ + ++ R + L M
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 265 VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSI 324
G P+++ +I +G L +EV + +GF +Y SSLID Y K
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 325 DRSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSV 380
D + V K+ N+ + MIDGL G EA K+ ME KG +PN VT+ ++
Sbjct: 726 DLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAM 785
Query: 381 LTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
+ G +E + + ++P Y ++D K G ++ A ++ M
Sbjct: 786 IDGFGMIGKIETCL-ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM 840
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 133/330 (40%), Gaps = 22/330 (6%)
Query: 71 DNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGK 130
+ PN + Y ALL HR +A M G P + +L+ + +
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Query: 131 TVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAH 186
V + + GF A ++ ++L++ Y + A KV +M E + +T MI
Sbjct: 695 EVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 754
Query: 187 VRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKDV---- 238
+ G+ D A +L M E+ N T+ AMIDG+ G IE L RM K V
Sbjct: 755 CKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814
Query: 239 ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISAC--AHLGALGLGKEVH 296
+++ L+ +N L EM VI + +LGL E+
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIG 874
Query: 297 H-----YLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLAT 351
+L V +D I + ++M + + + F V +NS+I+ L
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALR---LLEEVATFSATLVDYSSTYNSLIESLCL 931
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
+ A ++FSEM +KG+ P +F S++
Sbjct: 932 ANKVETAFQLFSEMTKKGVIPEMQSFCSLI 961
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 141/336 (41%), Gaps = 37/336 (11%)
Query: 210 WNAMIDGYAKSGNIECAEILFNRM------PCKDVISWTTLMTCYSRNKRFGDVVTL--- 260
+N+++ Y SG+ A L +M P V + C ++ D++ L
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 261 -FHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYA 319
+ EM++ G+ +++ +++ G V ++ GF D S +++
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 320 KCGSIDRSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGV 375
++ + L+F +++ V +++ + M+D G ++A K F+EM G PN V
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 376 TFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRG 435
T+ +++ A A V F +M+ + C+ P I Y ++D K G +E A ++
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCL-PNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 436 M-------------------TFEPNSFIWGALLSG-CKLHRNLEIANVA-VQNLMILEPS 474
M + PN +GALL G CK HR E + ++ EP
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP- 672
Query: 475 NSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKT 510
N Y L++ +V + E +++ M + G T
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 95/458 (20%), Positives = 183/458 (39%), Gaps = 83/458 (18%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA-CTLLMDSAAGKT 131
PN + Y+ LL C++ + + M+ G P+ F+SLV A CT S A K
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLG--------LAGDARKVFDEMPERDAFAWTTMI 183
+ V K G V L+ S+ G L A K + EM +
Sbjct: 395 LKKMV-KCGHMPGYVVYNILIG--SICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINV 451
Query: 184 SAHVRC----GEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMP- 234
S+ RC G+ + A + EM + +++T++ +++ + +E A +LF M
Sbjct: 452 SSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR 511
Query: 235 ---CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL 291
DV ++T ++ + + F+EM G P+ V T +I A +
Sbjct: 512 GGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSY 571
Query: 292 GKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL----------------- 334
E+ ++ G ++ S+LID + K G ++++ +F ++
Sbjct: 572 ANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYD 631
Query: 335 ---QVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVE 391
+ N+ + +++DG +EA K+ M +G PN + + +++ G ++
Sbjct: 632 DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 392 EGR----------------------------------SRFVS-MIEDYCISPGIEHYGCM 416
E + S+ +S M+E+ C +P + Y M
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSC-APNVVIYTEM 750
Query: 417 VDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSG 451
+D L K G ++A ++++ M +PN + A++ G
Sbjct: 751 IDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 203/453 (44%), Gaps = 27/453 (5%)
Query: 29 KTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDN-------PNALVYNAL 81
K +V+ +M+ F + A +N A S + + PN+++Y L
Sbjct: 199 KVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTL 258
Query: 82 LRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA-CTLLMDSAAGKTVHGHVWKRG 140
+ + C+R ++AL +M G VP + +F+ ++ C + A K V+ + RG
Sbjct: 259 IHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN-RMLIRG 317
Query: 141 FDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARLFD 200
F L+ +G A+ +F +P+ + + T+I V G +D A +
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLS 377
Query: 201 EMPER-----NSATWNAMIDGYAKSGNIECAEILFNRMP---CK-DVISWTTLMTCYSRN 251
+M + T+N++I GY K G + A + + M CK +V S+T L+ + +
Sbjct: 378 DMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKL 437
Query: 252 KRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG 311
+ + + +EM + GL P+ V +ISA + E+ + G DVY
Sbjct: 438 GKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTF 497
Query: 312 SSLIDMYAKCGSIDRSLLVFYKL----QVKNLFCWNSMIDGLATHGYAKEALKMFSEMER 367
+SLI + I +L + + V N +N++I+ G KEA K+ +EM
Sbjct: 498 NSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557
Query: 368 KGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIE 427
+G + +T+ S++ AG V++ RS F M+ D +P +++ L + G++E
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRD-GHAPSNISCNILINGLCRSGMVE 616
Query: 428 DALEMIRGMTFE---PNSFIWGALLSG-CKLHR 456
+A+E + M P+ + +L++G C+ R
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGR 649
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 176/384 (45%), Gaps = 22/384 (5%)
Query: 73 PNALVYNALLRTCV--HCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGK 130
P YN +L V +CH+ A + ML + PT ++F ++KA + + +
Sbjct: 180 PTFKSYNVVLEILVSGNCHKV--AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSAL 237
Query: 131 TVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEM------PERDAFAWTTMIS 184
++ + K G + + TL+ S +A ++ +EM P DA + +I
Sbjct: 238 SLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVP--DAETFNDVIL 295
Query: 185 AHVRCGEVDSAARLFDEMPERNSA----TWNAMIDGYAKSGNIECAEILFNRMPCKDVIS 240
+ ++ AA++ + M R A T+ +++G K G ++ A+ LF R+P +++
Sbjct: 296 GLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI 355
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMV-SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
+ TL+ + + R D + +MV S G+ PD ++I G +GL EV H +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 300 MVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV----KNLFCWNSMIDGLATHGYA 355
G +VY + L+D + K G ID + V ++ N +N +I
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGC 415
EA+++F EM RKG +P+ TF S+++ ++ MI + ++ + Y
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT-YNT 534
Query: 416 MVDLLSKGGLIEDALEMIRGMTFE 439
+++ + G I++A +++ M F+
Sbjct: 535 LINAFLRRGEIKEARKLVNEMVFQ 558
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 168/373 (45%), Gaps = 18/373 (4%)
Query: 48 FLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRN-GV 106
+LMN + ++ A F + P +++N L+ V R A A M+ + G+
Sbjct: 327 YLMNG-LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGI 385
Query: 107 VPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARK 166
VP +++SL+ V + +G +V+ T LV+ + LG +A
Sbjct: 386 VPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYN 445
Query: 167 VFDEMP----ERDAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYA 218
V +EM + + + +ISA + + A +F EMP + + T+N++I G
Sbjct: 446 VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLC 505
Query: 219 KSGNIECAEILFNRMPCKDVI----SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEV 274
+ I+ A L M + V+ ++ TL+ + R + L +EMV +G DE+
Sbjct: 506 EVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEI 565
Query: 275 AMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL 334
++I G + + + ++ +G + LI+ + G ++ ++ ++
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 335 QVK----NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFV 390
++ ++ +NS+I+GL G ++ L MF +++ +GI P+ VTF ++++ GFV
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Query: 391 EEGRSRFVSMIED 403
+ IED
Sbjct: 686 YDACLLLDEGIED 698
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 139/343 (40%), Gaps = 25/343 (7%)
Query: 141 FDAHVFVQTTLVEFYSMLGLAGDARKVFDEM-------PERDAFAWTTMISAHVRCGEVD 193
F +F+ +++ Y G G ++ EM P ++ I C +V
Sbjct: 144 FKESLFI--SIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKV- 200
Query: 194 SAARLFDEMPERNSA----TWNAMIDGYAKSGNIECAEILFNRMP----CKDVISWTTLM 245
AA +F +M R T+ ++ + I+ A L M + + + TL+
Sbjct: 201 -AANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 246 TCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFG 305
S+ R + + L EM G PD VI + ++ + +++ GF
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFA 319
Query: 306 LDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM 365
D L++ K G +D + +FY++ + +N++I G THG +A + S+M
Sbjct: 320 PDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 366 -ERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGG 424
GI P+ T+ S++ G V M C P + Y +VD K G
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGC-KPNVYSYTILVDGFCKLG 438
Query: 425 LIEDALEMIRGMT---FEPNSFIWGALLSG-CKLHRNLEIANV 463
I++A ++ M+ +PN+ + L+S CK HR E +
Sbjct: 439 KIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEI 481
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 191/428 (44%), Gaps = 52/428 (12%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVK- 118
+ L F PN + +N L+ +++ +A+A +M+ G P ++ +V
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 119 ---------ACTLLMDSAAGKTVHG-------------------------HVWKRGFDAH 144
A LL GK G + +G +
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFD 200
V ++L+ G DA ++ +M ER D F ++ +I A V+ G++ A +L+D
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 201 EMPERNS----ATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNK 252
EM +R+ T++++I+G+ ++ A+ +F M K DV+++ TL+ + + K
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
R + + +F EM RGL + V +I G + +E+ ++ +G ++ +
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATHGYAKEALKMFSEMERK 368
+L+D K G ++++++VF LQ + + +N MI+G+ G ++ +F + K
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIED 428
G++P+ V + ++++ G EE + F M ED + P Y ++ + G E
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL-PNSGCYNTLIRARLRDGDREA 589
Query: 429 ALEMIRGM 436
+ E+I+ M
Sbjct: 590 SAELIKEM 597
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 182/436 (41%), Gaps = 56/436 (12%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ + ++ LL ++ ++ +M G+ Y++S L+ V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEM----PERDAFAWTTMISAHVR 188
G + K G++ ++ ++L+ Y +A + D+M + + + T+I
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 189 CGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPC----KDVIS 240
+ A L D M + + T+ +++G K G+ + A L N+M V+
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLI 258
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
+ T++ + K D + LF EM ++G+ P+ V +++IS + G + ++
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 301 VNGFGLDVYIGSSLIDMYAKCG---------------SIDRSLLVFYKL----------- 334
DV+ S+LID + K G SID S++ + L
Sbjct: 319 ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLD 378
Query: 335 QVKNLF-------------CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
+ K +F +N++I G + +E +++F EM ++G+ N VT+ ++
Sbjct: 379 EAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI 438
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL---EMIRGMTF 438
AG + + F M+ D + P I Y ++D L K G +E A+ E ++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 497
Query: 439 EPNSFIWGALLSG-CK 453
EP + + ++ G CK
Sbjct: 498 EPTIYTYNIMIEGMCK 513
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 158/350 (45%), Gaps = 30/350 (8%)
Query: 137 WKRGFDAHVFVQTTLVEFYSMLGLA----GDARKVFDEMPERDAFA----WTTMISAHVR 188
W+R F E S GL+ DA +F EM + F ++ ++SA +
Sbjct: 36 WRRAFSGKT--SYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAK 93
Query: 189 CGEVDSAARLFDEMPE----RNSATWNAMIDGYAKSGNIECAEILFNRM------PCKDV 238
+ D L ++M N T++ +I+ + + + A + +M P ++
Sbjct: 94 MNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEP--NI 151
Query: 239 ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHY 298
++ ++L+ Y +KR + V L +M G P+ V T+I +
Sbjct: 152 VTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDR 211
Query: 299 LMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATHGY 354
++ G D+ +++ K G D + + K++ L +N++IDGL + +
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 355 AKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYG 414
+AL +F EME KGIRPN VT+ S+++ + G + SR +S + + I+P + +
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA-SRLLSDMIERKINPDVFTFS 330
Query: 415 CMVDLLSKGGLIEDALEMIRGM---TFEPNSFIWGALLSGCKLHRNLEIA 461
++D K G + +A ++ M + +P+ + +L++G +H L+ A
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 103/192 (53%)
Query: 283 CAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCW 342
C L K VH + + LD+ L++MY+ CG + + VF K+ KNL W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
+I A +G+ ++A+ MFS + +G P+G F + AC G V+EG F SM
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 403 DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIAN 462
DY I+P IE Y +V++ + G +++ALE + M EPN +W L++ ++H NLE+ +
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Query: 463 VAVQNLMILEPS 474
+ + L+P+
Sbjct: 444 YCAEVVEFLDPT 455
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Query: 213 MIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPD 272
+++ Y+ G A +F +M K++ +W ++ C+++N D + +F G PD
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 273 EVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS--SLIDMYAKCGSIDRSLLV 330
+ AC LG + G +H M +G+ I SL++MYA G +D +L
Sbjct: 355 GQLFRGIFYACGMLGDVDEGL-LHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEF 413
Query: 331 FYKLQVK-NLFCWNSMIDGLATHG 353
++ ++ N+ W ++++ HG
Sbjct: 414 VERMPMEPNVDVWETLMNLSRVHG 437
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 176/382 (46%), Gaps = 18/382 (4%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
P+ + + L+ +++ +A+A +M+ G P ++ +++ +
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHV 187
+ + K +A V + T+++ DA +F++M + D F + +IS
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 188 RCGEVDSAARLFDEMPERNSAT----WNAMIDGYAKSGNIECAEILFNRMP----C-KDV 238
G A+RL +M E+N +NA+ID + K G + AE L++ M C DV
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 239 ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHY 298
+++ TL+ + + KR + + +F EM RGL + V TT+I + V
Sbjct: 357 VAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQ 416
Query: 299 LMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATHGY 354
++ +G D+ + L+D G+++ +L+VF +Q +++ + +MI+ L G
Sbjct: 417 MVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476
Query: 355 AKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYG 414
++ +F + KG++PN VT+ ++++ G EE + FV M ED + P Y
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL-PNSGTYN 535
Query: 415 CMVDLLSKGGLIEDALEMIRGM 436
++ + G + E+I+ M
Sbjct: 536 TLIRARLRDGDEAASAELIKEM 557
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 181/419 (43%), Gaps = 24/419 (5%)
Query: 88 CHRSHQALACYV--KMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHV 145
C RS +LA + KM++ G P+ + +SL+ + + + + G+
Sbjct: 121 CRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDT 180
Query: 146 FVQTTLVEFYSMLGLAGDARKVFDEMP----ERDAFAWTTMISAHVRCGEVDSAARLFDE 201
TTLV A +A + + M + D + +I+ + GE D A L ++
Sbjct: 181 VTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNK 240
Query: 202 MP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKR 253
M E + +N +IDG K +++ A LFN+M K DV ++ L++C R
Sbjct: 241 MEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGR 300
Query: 254 FGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL-DVYIGS 312
+ D L +M+ + + PD V +I A G L ++++ ++ + DV +
Sbjct: 301 WSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYN 360
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
+LI + K ++ + VF ++ V N + ++I G A +F +M
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIED 428
G+ P+ +T+ +L + G VE F M + + I Y M++ L K G +ED
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYM-QKRDMKLDIVTYTTMIEALCKAGKVED 479
Query: 429 ALEMIRGMTF---EPNSFIWGALLSG-CKLHRNLEIANVAVQNLMILEPSNSGYYSLLV 483
++ ++ +PN + ++SG C+ E + V+ NSG Y+ L+
Sbjct: 480 GWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/484 (21%), Positives = 206/484 (42%), Gaps = 30/484 (6%)
Query: 45 QDSFLMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRN 104
+DS +MN+ A T+ H P + +N +L +C + +++M R
Sbjct: 214 RDSRMMNKASAVYETM------IEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRR 267
Query: 105 GVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDA 164
+ + +++ L+ + + HG + + GF + L+E Y GL DA
Sbjct: 268 NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDA 327
Query: 165 RKVFDEMPERDAFAWTTMISAHV----RCGEVDSAARLFDEMPERNSATWNAMIDGYAKS 220
V DEM + T+ + ++ G +D A L M + ++N ++ GY K
Sbjct: 328 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKM 387
Query: 221 GNIECAEILFNRMPCKDV----ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAM 276
G A +LF+ + D+ +++ TL+ + L EM ++ + PD +
Sbjct: 388 GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITY 447
Query: 277 TTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL-- 334
TT++ G L + EV+ ++ G D Y ++ + G D++ + ++
Sbjct: 448 TTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Query: 335 ---QVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVE 391
+L +N IDGL G +A++ ++ R G+ P+ VT+ +V+ G +
Sbjct: 508 TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 567
Query: 392 EGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM---IRGMTFEPNSFIWGAL 448
R+ + M+ + P + Y ++ +K G +E A + ++ PN AL
Sbjct: 568 MARNLYDEMLRKR-LYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNAL 626
Query: 449 LSGCKLHRNLEIANVAVQNLMILE----PSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKD 504
L G N++ A + L +E P N Y++L++ + +W+EV K+ M D
Sbjct: 627 LYGMCKAGNID---EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLD 683
Query: 505 LGVE 508
+E
Sbjct: 684 KEIE 687
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 184/432 (42%), Gaps = 64/432 (14%)
Query: 76 LVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA-CTL-LMDSAAGKTVH 133
+ YN L+ + +A + M R+G T YSF+ L++ C L D A G T
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVT-- 331
Query: 134 GHVWKRGFDAHVFVQTTLVEFY----SMLGLAGDARKVFDEMPERDAFAWTTMISAHVRC 189
+A ++ T+ Y G DAR++ M D ++ T++ +++
Sbjct: 332 ----DEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDVVSYNTLMHGYIKM 387
Query: 190 GEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISW 241
G+ A+ LFD++ + T+N +IDG +SGN+E A+ L M + DVI++
Sbjct: 388 GKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITY 447
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM- 300
TTL+ + +N ++ EM+ +G+ PD A TT LG +H ++
Sbjct: 448 TTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA 507
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL-------------------------- 334
+ D+ I + ID K G++ +++ K+
Sbjct: 508 TDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 567
Query: 335 QVKNLF-------------CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
+NL+ + +I G A G ++A + +EM+++G+RPN +T ++L
Sbjct: 568 MARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALL 627
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM---TF 438
AG ++E R++ +E+ I P Y ++ E+ +++ + M
Sbjct: 628 YGMCKAGNIDEA-YRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEI 686
Query: 439 EPNSFIWGALLS 450
EP+ + AL
Sbjct: 687 EPDGYTHRALFK 698
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 166/364 (45%), Gaps = 21/364 (5%)
Query: 164 ARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMID 215
A VF EM E + F + +I G +D A LFD+M + N T+N +ID
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 216 GYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAP 271
GY K I+ L M K ++IS+ ++ R R +V + EM RG +
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 272 DEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVF 331
DEV T+I G +H ++ +G V +SLI K G+++R++
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 332 YKLQVKNL----FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHA 387
+++V+ L + +++DG + GY EA ++ EM G P+ VT+ +++
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 388 GFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFI 444
G +E+ + M E +SP + Y ++ + +++AL + R M +P++
Sbjct: 429 GKMEDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 445 WGALLSG-CKLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMK 503
+ +L+ G C+ R E ++ + L + P + Y+ L+N Y ++ ++ M
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 504 DLGV 507
+ GV
Sbjct: 548 EKGV 551
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 164/360 (45%), Gaps = 31/360 (8%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
+ + YN L++ HQAL + +MLR+G+ P+ +++SL+ + +
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRC 189
+ RG + TTLV+ +S G +A +V EM + + +I+ H
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428
Query: 190 GEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISW 241
G+++ A + ++M E+ + +++ ++ G+ +S +++ A + M K D I++
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
++L+ + +R + L+ EM+ GL PDE T +I+A G L ++H+ ++
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548
Query: 302 NGFGLDVYIGSSLI---DMYAKCGSIDRSLL-VFYKLQVKNLFCWN-------------- 343
G DV S LI + ++ R LL +FY+ V + ++
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608
Query: 344 -SMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
S+I G G EA ++F M K +P+G + ++ AG + + + + M++
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/423 (19%), Positives = 170/423 (40%), Gaps = 24/423 (5%)
Query: 14 DKILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAA---CTTINLATHAFSHM 70
+ +LD R SKR E+V+ M+++ + + F N I I++A F M
Sbjct: 173 NAVLDATIR-SKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 71 DN----PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDS 126
+ PN + YN L+ + M G+ P S++ ++
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 127 AAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTM 182
V + +RG+ TL++ Y G A + EM +T++
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 183 ISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMP---- 234
I + + G ++ A D+M R N T+ ++DG+++ G + A + M
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 235 CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKE 294
V+++ L+ + + D + + +M +GL+PD V+ +TV+S +
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 295 VHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLA 350
V ++ G D SSLI + + + ++ ++ L F + ++I+
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 351 THGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGI 410
G ++AL++ +EM KG+ P+ VT+ ++ E + + + + + +
Sbjct: 532 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 591
Query: 411 EHY 413
++
Sbjct: 592 TYH 594
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 133/344 (38%), Gaps = 47/344 (13%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
+P+ + YNAL+ + A+A M G+ P S+S+++ D
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALR 471
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE----RDAFAWTTMISAHV 187
V + ++G ++L++ + +A +++EM D F +T +I+A+
Sbjct: 472 VKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYC 531
Query: 188 RCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAE-----ILFNRMPCKDV 238
G+++ A +L +EM E+ + T++ +I+G K A+ + + DV
Sbjct: 532 MEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDV 591
Query: 239 ISWTTLMTCYSRNKRFGDVVTL----------------FHEMVSRGLAPDEVAMTTVISA 282
T + C N F VV+L F M+ + PD A +I
Sbjct: 592 TYHTLIENC--SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHG 649
Query: 283 CAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID----------RSLLVFY 332
G + ++ ++ +GF L +L+ K G ++ RS +
Sbjct: 650 HCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSE 709
Query: 333 KLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVT 376
Q K L N G L + +EM + G PNG++
Sbjct: 710 AEQAKVLVEINH------REGNMDVVLDVLAEMAKDGFLPNGIS 747
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 177/393 (45%), Gaps = 22/393 (5%)
Query: 60 INLATHAFSHMD-NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVK 118
IN A M +P+ + YN +LR+ + QA+ +ML+ P +++ L++
Sbjct: 188 INNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIE 247
Query: 119 ACTLLMDSAAGKTVH--GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP---- 172
A DS G + + RG V LV G +A K ++MP
Sbjct: 248 ATC--RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGC 305
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEI 228
+ + ++ + G A +L +M + + T+N +I+ + G + A
Sbjct: 306 QPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAID 365
Query: 229 LFNRMP---CK-DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACA 284
+ +MP C+ + +S+ L+ + + K+ + MVSRG PD V T+++A
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALC 425
Query: 285 HLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----F 340
G + E+ + L G + +++ID AK G +++ + +++ K+L
Sbjct: 426 KDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTI 485
Query: 341 CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSM 400
++S++ GL+ G EA+K F E ER GIRPN VTF S++ + + V M
Sbjct: 486 TYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Query: 401 IEDYCISPGIEHYGCMVDLLSKGGLIEDALEMI 433
I C P Y +++ L+ G+ ++ALE++
Sbjct: 546 INRGC-KPNETSYTILIEGLAYEGMAKEALELL 577
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 155/371 (41%), Gaps = 23/371 (6%)
Query: 23 CSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMD-------NPNA 75
C + K V M++ + D I A + HA +D P+
Sbjct: 215 CDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDV 274
Query: 76 LVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGH 135
+ YN L+ R +A+ M +G P + + ++++ + +
Sbjct: 275 VTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLAD 334
Query: 136 VWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGE 191
+ ++GF V L+ F GL G A + ++MP+ ++ ++ ++ + +
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 192 VDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKD----VISWTT 243
+D A + M R + T+N M+ K G +E A + N++ K +I++ T
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNT 454
Query: 244 LMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNG 303
++ ++ + G + L EM ++ L PD + ++++ + G + + H G
Sbjct: 455 VIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMG 514
Query: 304 FGLDVYIGSSLIDMYAKCGSIDRSL--LVFY--KLQVKNLFCWNSMIDGLATHGYAKEAL 359
+ +S++ K DR++ LVF + N + +I+GLA G AKEAL
Sbjct: 515 IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEAL 574
Query: 360 KMFSEMERKGI 370
++ +E+ KG+
Sbjct: 575 ELLNELCNKGL 585
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 119/289 (41%), Gaps = 43/289 (14%)
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPERNSA-----TWNAMIDGYAKSGNIECAEIL 229
D TT+I R G+ AA++ E+ E + A T+N MI GY K+G I A +
Sbjct: 136 DIIPCTTLIRGFCRLGKTRKAAKIL-EILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 230 FNRMPCK-DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGA 288
+RM DV+++ T++ + + + + M+ R PD + T +I A
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSG 254
Query: 289 LGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDG 348
+G ++ + G DV +N +++G
Sbjct: 255 VGHAMKLLDEMRDRGCTPDVVT-------------------------------YNVLVNG 283
Query: 349 LATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISP 408
+ G EA+K ++M G +PN +T +L + G + M+ SP
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG-FSP 342
Query: 409 GIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSG-CK 453
+ + +++ L + GL+ A++++ M +PNS + LL G CK
Sbjct: 343 SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 9/196 (4%)
Query: 260 LFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYA 319
MV G PD + TT+I LG ++ L +G DV + +I Y
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYC 183
Query: 320 KCGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFV 378
K G I+ +L V ++ V ++ +N+++ L G K+A+++ M ++ P+ +T+
Sbjct: 184 KAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYT 243
Query: 379 SVLTA-CTHAGFVEEGRS-RFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
++ A C +G G + + + + D +P + Y +V+ + K G +++A++ + M
Sbjct: 244 ILIEATCRDSGV---GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 437 TF---EPNSFIWGALL 449
+PN +L
Sbjct: 301 PSSGCQPNVITHNIIL 316
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 117/488 (23%), Positives = 211/488 (43%), Gaps = 71/488 (14%)
Query: 51 NQFIAACTTINLATHAFSHMD-------NPNALVYNALLRTCVHCHRSHQALACYVKMLR 103
N I+A ++ L AF M+ +P YN ++ + +A + +MLR
Sbjct: 274 NTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLR 333
Query: 104 NGVVPTSYSFSSLV-KACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAG 162
+G+ P S ++ SL+ +AC K+G +VE
Sbjct: 334 SGLSPDSTTYRSLLMEAC-----------------KKG---------DVVE--------- 358
Query: 163 DARKVFDEMPERDAFA----WTTMISAHVRCGEVDSAARLFDEMPE----RNSATWNAMI 214
KVF +M RD +++M+S R G +D A F+ + E ++ + +I
Sbjct: 359 -TEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 215 DGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
GY + G I A L N M + DV+++ T++ + K G+ LF+EM R L
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
PD +T +I LG L E+ + LDV ++L+D + K G ID + +
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 331 FYKLQVKNLF----CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
+ + K + ++ +++ L + G+ EA +++ EM K I+P + S++
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 387 AGFVEEGRSRFVSMIED----YCISPGIEHYGCMVDL-LSKG-GLIEDALEMIRGMTFEP 440
+G +G S MI + CIS YG + + +SK GL++ E G+ P
Sbjct: 598 SGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV--P 655
Query: 441 NSFIWGALLSGCKLHRNLEIANVAVQNLMI--LEPSNSGYYSLLVNMYAEVNRWKEVSKI 498
+ F + ++L G ++ A V ++ ++ + P S Y+ ++N + + E +I
Sbjct: 656 DVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST-YTCMINGFVSQDNLTEAFRI 714
Query: 499 RIAMKDLG 506
M G
Sbjct: 715 HDEMLQRG 722
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 178/395 (45%), Gaps = 26/395 (6%)
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGK--TVHGHV 136
NAL+ + V A Y ++ R+GV Y+ + +V A L D K T V
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNA--LCKDGKMEKVGTFLSQV 261
Query: 137 WKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEV 192
++G + TL+ YS GL +A ++ + MP + + + T+I+ + G+
Sbjct: 262 QEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY 321
Query: 193 DSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVIS----WTTL 244
+ A +F EM +S T+ +++ K G++ E +F+ M +DV+ ++++
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 245 MTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGF 304
M+ ++R+ + F+ + GL PD V T +I G + + + + ++ G
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 305 GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLF----CWNSMIDGLATHGYAKEALK 360
+DV ++++ K + + +F ++ + LF +IDG G + A++
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAME 501
Query: 361 MFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLL 420
+F +M+ K IR + VT+ ++L G ++ + + M+ I P Y +V+ L
Sbjct: 502 LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE-ILPTPISYSILVNAL 560
Query: 421 SKGGLIEDAL----EMIRGMTFEPNSFIWGALLSG 451
G + +A EMI +P I +++ G
Sbjct: 561 CSKGHLAEAFRVWDEMI-SKNIKPTVMICNSMIKG 594
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/318 (18%), Positives = 125/318 (39%), Gaps = 53/318 (16%)
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNRMPC 235
+ + + MI VR G + A M R+ + +++ + F+
Sbjct: 113 SLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDST---------FSNCGS 163
Query: 236 KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEV 295
D + + L+ Y + ++ + F + S+G A +I + +G + L V
Sbjct: 164 NDSV-FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 296 HHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK------------------ 337
+ + +G G++VY + +++ K G +++ ++Q K
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 338 ---------------------NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVT 376
++ +N++I+GL HG + A ++F+EM R G+ P+ T
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 377 FVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL---EMI 433
+ S+L G V E F M + P + + M+ L ++ G ++ AL +
Sbjct: 343 YRSLLMEACKKGDVVETEKVFSDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 434 RGMTFEPNSFIWGALLSG 451
+ P++ I+ L+ G
Sbjct: 402 KEAGLIPDNVIYTILIQG 419
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/272 (20%), Positives = 106/272 (38%), Gaps = 21/272 (7%)
Query: 23 CSKREKKTLESVYANMIKTNANQDSFLMNQFIAA-CTTINL--ATHAFSHMDNP----NA 75
C ++ + ++ M + DS+ + I C NL A F M +
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 76 LVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGH 135
+ YN LL A + M+ ++PT S+S LV A A V
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 136 VWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGE 191
+ + V + ++++ Y G A D ++M D ++ T+I VR
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 192 VDSAARLFDEMPERNSA------TWNAMIDGYAKSGNIECAEILFNRMPCK----DVISW 241
+ A L +M E T+N+++ G+ + ++ AE++ +M + D ++
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDE 273
T ++ + + + EM+ RG +PD+
Sbjct: 696 TCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 94/221 (42%), Gaps = 20/221 (9%)
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
N++I L G+ + A ++ E+ R G+ N T ++ A G +E+ + F+S ++
Sbjct: 204 NALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGT-FLSQVQ 262
Query: 403 DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSGCKLHRNLE 459
+ + P I Y ++ S GL+E+A E++ M F P + + +++G H E
Sbjct: 263 EKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYE 322
Query: 460 IANVAVQNLMI--LEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWV 517
A ++ L P ++ Y SLL+ E + +V + D+ P V
Sbjct: 323 RAKEVFAEMLRSGLSPDSTTYRSLLM----EACKKGDVVETEKVFSDMRSRDVVP--DLV 376
Query: 518 EINQKIHLFAASDNYHTSYGHVNXXXXXXXXXXXXAGYVPE 558
+ + LF S N + + N AG +P+
Sbjct: 377 CFSSMMSLFTRSGNLDKALMYFN--------SVKEAGLIPD 409
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 182/418 (43%), Gaps = 25/418 (5%)
Query: 63 ATHAFSHMD----NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVK 118
A + F MD P YNA++ V QA Y++M G+ P YSF+ +K
Sbjct: 95 AVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMK 154
Query: 119 ACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAF- 177
+ A + ++ +G + +V T+V + + ++F +M
Sbjct: 155 SFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSL 214
Query: 178 ---AWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECA---- 226
+ ++ + G+V +L D++ +R N T+N I G + G ++ A
Sbjct: 215 CLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMV 274
Query: 227 EILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
L + P DVI++ L+ +N +F + +MV+ GL PD T+I+
Sbjct: 275 GCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKG 334
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCW 342
G + L + + + NGF D + SLID G +R+L +F + K N+ +
Sbjct: 335 GMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
N++I GL+ G EA ++ +EM KG+ P TF ++ G V + MI
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 403 DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSG-CKLHR 456
P I + ++ S +E+ALE++ M +P+ + + +LL+G CK +
Sbjct: 455 KGYF-PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 106/493 (21%), Positives = 193/493 (39%), Gaps = 64/493 (12%)
Query: 23 CSKREKKTLESVYANMIKTNANQDSFLMNQFIAACT-------TINLATHAFSHMDNPNA 75
C K + K E + +IK + F N FI + + P+
Sbjct: 227 CKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDV 286
Query: 76 LVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA-CTLLMDSAAGKTVHG 134
+ YN L+ + +A KM+ G+ P SY++++L+ C M A + V
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 135 HVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCG 190
V+ GF F +L++ G A +F+E + + + T+I G
Sbjct: 347 AVF-NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405
Query: 191 EVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMT 246
+ AA+L +EM E+ T+N +++G K G
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMG------------------------- 440
Query: 247 CYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL 306
C S D L M+S+G PD +I + + E+ ++ NG
Sbjct: 441 CVS------DADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 307 DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK-----NLFCWNSMIDGLATHGYAKEALKM 361
DVY +SL++ K + ++ YK V+ NLF +N +++ L + EAL +
Sbjct: 495 DVYTYNSLLNGLCKTSKFE-DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGL 553
Query: 362 FSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLS 421
EM+ K + P+ VTF +++ G ++ + F M E Y +S Y ++ +
Sbjct: 554 LEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFT 613
Query: 422 KGGLIEDALEMIRGMT---FEPNSFIWGALLSG-CKLHRNLEIANVAVQNLMILEPSNSG 477
+ + A ++ + M P+ + + ++ G CK NV + +LE +G
Sbjct: 614 EKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK------TGNVNLGYKFLLEMMENG 667
Query: 478 YYSLLVNMYAEVN 490
+ L + +N
Sbjct: 668 FIPSLTTLGRVIN 680
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 104/259 (40%), Gaps = 24/259 (9%)
Query: 38 MIKTNANQDSFLMNQFIAACTTINLATHAFSHMD-------NPNALVYNALLRTCVHCHR 90
MI D F N I +T +A +D +P+ YN+LL +
Sbjct: 452 MISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSK 511
Query: 91 SHQALACYVKMLRNGVVPTSYSFSSLVKACTLL--MDSAAGKTVHGHVWKRGFDAHVFVQ 148
+ Y M+ G P ++F+ L+++ +D A G DA F
Sbjct: 512 FEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF-- 569
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPERDAFAWTT-----MISAHVRCGEVDSAARLFDEMP 203
TL++ + G A +F +M E + +T +I A V A +LF EM
Sbjct: 570 GTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 204 ER----NSATWNAMIDGYAKSGNIECA-EILFNRMPCKDVISWTTL---MTCYSRNKRFG 255
+R + T+ M+DG+ K+GN+ + L M + S TTL + C R
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVY 689
Query: 256 DVVTLFHEMVSRGLAPDEV 274
+ + H MV +GL P+ V
Sbjct: 690 EAAGIIHRMVQKGLVPEAV 708
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 161/347 (46%), Gaps = 16/347 (4%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ + +LL +R +A++ M G VP +++++ D V
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVR 188
+ K+G A TL+ S G DA ++ +M +R + +T +I V+
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVK 266
Query: 189 CGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVIS 240
G + A L+ EM R N T+N++I+G+ G + A+ +F+ M K DV++
Sbjct: 267 EGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVT 326
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
+ TL+T + ++KR D + LF EM +GL D T+I G L + ++V + ++
Sbjct: 327 YNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAK 356
G D+ + L+D G I+++L++ LQ ++ +N +I GL K
Sbjct: 387 DCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK 446
Query: 357 EALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
EA +F + RKG++P+ + ++++++ G E M ED
Sbjct: 447 EAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 170/405 (41%), Gaps = 77/405 (19%)
Query: 78 YNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVW 137
Y LR +HC + A + + +ML++ +P+ F+ ++ TV +
Sbjct: 47 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVL-------------TVIAKMN 93
Query: 138 KRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAAR 197
K FD +++ + LG++ D +++T +I RC + A
Sbjct: 94 K--FDIVIYLYHKM----ENLGIS------------HDLYSFTILIHCFCRCSRLSLALA 135
Query: 198 LFDEMPE---RNS-ATWNAMIDGYAKSGNIECAEILFNRMP----CKDVISWTTLMTCYS 249
L +M + R S T ++++G+ + + A L + M +V+ + T++
Sbjct: 136 LLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLC 195
Query: 250 RNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVY 309
+N+ + + +F+ M +G+ D V T+IS ++ G + ++ +V
Sbjct: 196 KNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVI 255
Query: 310 IGSSLIDMYAKCGSIDRSLLVFYKL----QVKNLFCWNSMIDGLATHGYAKEALKMFSEM 365
++LID + K G++ + ++ ++ V N+F +NS+I+G HG +A MF M
Sbjct: 256 FFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLM 315
Query: 366 ERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSM---------------IEDYC----- 405
KG P+ VT+ +++T + VE+G F M I YC
Sbjct: 316 VSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKL 375
Query: 406 --------------ISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
+SP I Y ++D L G IE AL M+ +
Sbjct: 376 NVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 105/246 (42%), Gaps = 45/246 (18%)
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
+F D +LF EM+ P V T V++ A + + ++H + G D+Y +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 313 SLIDMYAKC-------------------------GSIDRSLLVFYKLQ------------ 335
LI + +C GS+ + Q
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 336 --VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEG 393
V N+ +N++I+GL + AL++F ME+KGIR + VT+ ++++ +++G +
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 394 RSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL----EMIRGMTFEPNSFIWGALL 449
M++ I P + + ++D K G + +A EMIR + PN F + +L+
Sbjct: 239 ARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARNLYKEMIR-RSVVPNVFTYNSLI 296
Query: 450 SGCKLH 455
+G +H
Sbjct: 297 NGFCIH 302
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 191/448 (42%), Gaps = 91/448 (20%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYV-KMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
PN + YNA++ C + +A + +M RNGV P +F+SL+ C+
Sbjct: 301 PNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCS---------- 350
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP----ERDAFAWTTMISAHV 187
G +W+ AR +FDEM E+D F++ T++ A
Sbjct: 351 -RGGLWEA------------------------ARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 188 RCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMP----CKDVI 239
+ G++D A + +MP + N +++ +IDG+AK+G + A LF M D +
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 240 SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
S+ TL++ Y++ R + + + EM S G+ D V ++ G K+V +
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 300 MVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATHGYA 355
++ S+LID Y+K G ++ +F + + L ++++ID L +G
Sbjct: 506 KREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLV 565
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGC 415
A+ + EM ++GI PN VT+ S++ A GRS + DY +
Sbjct: 566 GSAVSLIDEMTKEGISPNVVTYNSIIDAF--------GRSATMDRSADYSNGGSLPFSSS 617
Query: 416 MVDLLSK----------GGLIEDA------------------LEMIRGM---TFEPNSFI 444
+ L++ G L ++ LE+ R M +PN
Sbjct: 618 ALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVT 677
Query: 445 WGALLSGCKLHRNLEIANVAVQNLMILE 472
+ A+L+ C + E A++ ++ L + +
Sbjct: 678 FSAILNACSRCNSFEDASMLLEELRLFD 705
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 43/239 (17%)
Query: 277 TTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV 336
+ +IS G + + K + G+G VY S+LI Y + G
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSG-------------- 282
Query: 337 KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSR 396
+EA+ +F+ M+ G+RPN VT+ +V+ AC G + ++
Sbjct: 283 -----------------LHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 397 FVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLS--- 450
F ++ + P + ++ + S+GGL E A + MT E + F + LL
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 451 -GCKLHRNLEI-ANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGV 507
G ++ EI A + V+ +M N YS +++ +A+ R+ E + M+ LG+
Sbjct: 386 KGGQMDLAFEILAQMPVKRIM----PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGI 440
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 174/386 (45%), Gaps = 27/386 (6%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKM----LRNGVVPTSYSFSSLVKACTLLMDSA 127
P+ + Y +L S AL + KM ++ VV S SL K + D A
Sbjct: 207 QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF--DDA 264
Query: 128 AGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMI 183
++ + +G A V ++L+ G D K+ EM R D ++ +I
Sbjct: 265 L--SLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALI 322
Query: 184 SAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCK--- 236
V+ G++ A L++EM R ++ T+N++IDG+ K + A +F+ M K
Sbjct: 323 DVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCE 382
Query: 237 -DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEV 295
D+++++ L+ Y + KR D + LF E+ S+GL P+ + T++ G L KE+
Sbjct: 383 PDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKEL 442
Query: 296 HHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLF----CWNSMIDGLAT 351
++ G V L+D G ++++L +F K+Q + +N +I G+
Sbjct: 443 FQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCN 502
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIE 411
+A +F + KG++P+ VT+ ++ G + E F M ED C +P
Sbjct: 503 ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC-TPDDF 561
Query: 412 HYGCMVDL-LSKGGLIEDALEMIRGM 436
Y ++ L GLI ++E+I M
Sbjct: 562 TYNILIRAHLGGSGLIS-SVELIEEM 586
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/476 (22%), Positives = 204/476 (42%), Gaps = 31/476 (6%)
Query: 60 INLATHAFSHMDN----PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSS 115
+N A F M P + +N L + L M NG+ Y+ +
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 116 LVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFD---EMP 172
++ +V G WK G++ +TLV + + G +A + D EM
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 173 ER-DAFAWTTMISAHVRCGEVDSAARLFDEMPE----RNSATWNAMIDGYAKSGNIECAE 227
+R D +T+I+ G V A L D M E + T+ +++ KSGN A
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 228 ILFNRMPCKD----VISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISAC 283
LF +M ++ V+ ++ ++ ++ F D ++LF+EM +G+ D V +++I
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 284 AHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL---- 339
+ G G ++ ++ DV S+LID++ K G + + ++ ++ + +
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDT 350
Query: 340 FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVS 399
+NS+IDG EA +MF M KG P+ VT+ ++ + A V++G R
Sbjct: 351 ITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM-RLFR 409
Query: 400 MIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSGC---- 452
I + P Y +V + G + A E+ + M P+ +G LL G
Sbjct: 410 EISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNG 469
Query: 453 KLHRNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVE 508
+L++ LEI ++ M L G Y+++++ ++ + + ++ D GV+
Sbjct: 470 ELNKALEIFEKMQKSRMTL---GIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 111/271 (40%), Gaps = 17/271 (6%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ + YN+L+ + H+A + M+ G P ++S L+ + G +
Sbjct: 348 PDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRL 407
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVR 188
+ +G + TLV + G A+++F EM R + ++
Sbjct: 408 FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCD 467
Query: 189 CGEVDSAARLFDEMPERNS----ATWNAMIDGYAKSGNIECAEILFNRMPCK----DVIS 240
GE++ A +F++M + +N +I G + ++ A LF + K DV++
Sbjct: 468 NGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVT 527
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGL--GKEVHHY 298
+ ++ + + LF +M G PD+ +I AHLG GL E+
Sbjct: 528 YNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR--AHLGGSGLISSVELIEE 585
Query: 299 LMVNGFGLDVYIGSSLIDMYAKCGSIDRSLL 329
+ V GF D +IDM + +D+S L
Sbjct: 586 MKVCGFSADSSTIKMVIDMLSD-RRLDKSFL 615
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 166/350 (47%), Gaps = 20/350 (5%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYV--KMLRNGVVPTSYSFSSLVKACTLLMDSAAG 129
P+ + Y A++ C R LA + KM + + +S+++ +
Sbjct: 202 QPDLVTYGAVINGL--CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 130 KTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISA 185
+ + +G VF ++L+ G DA ++ +M ER + + ++I A
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 186 HVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKD---- 237
+ G++ A +LFDEM +R N T+N++I+G+ ++ A+ +F M KD
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 238 VISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHH 297
V+++ TL+ + + K+ D + LF +M RGL + V TT+I + V
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 298 YLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHG 353
++ +G ++ ++L+D K G ++++++VF LQ +++ +N M +G+ G
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAG 499
Query: 354 YAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
++ +F + KG++P+ + + ++++ G EE + F+ M ED
Sbjct: 500 KVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKED 549
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 181/402 (45%), Gaps = 25/402 (6%)
Query: 74 NALVYNALLRTCVHCHRSHQ--ALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
N YN ++ C+ C RS ALA KM++ G P+ + +SL+ +
Sbjct: 99 NLYTYNIMI-NCL-CRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP----ERDAFAWTTMISAHV 187
+ + + G+ TTLV A +A + + M + D + +I+
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 188 RCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVI 239
+ GE D A L ++M E + ++ +ID K +++ A LF M K DV
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 240 SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
++++L++C R+ D L +M+ R + P+ V ++I A A G L +++ +
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 300 MVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYA 355
+ ++ +SLI+ + +D + +F + K ++ +N++I+G
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGC 415
+ +++F +M R+G+ N VT+ +++ A + + F M+ D + P I Y
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNT 455
Query: 416 MVDLLSKGGLIEDAL---EMIRGMTFEPNSFIWGALLSG-CK 453
++D L K G +E A+ E ++ EP+ + + + G CK
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/398 (20%), Positives = 166/398 (41%), Gaps = 48/398 (12%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
P+ + + L+ +++ +A+A +M+ G P ++ +++ +
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHV 187
+ + K +A V + +T+++ DA +F EM + D F ++++IS
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 188 RCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVI 239
G A+RL +M ER N T+N++ID +AK G + AE LF+ M + +++
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 240 SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
++ +L+ + + R + +F MVS+ PD V T+I+ + G E+ +
Sbjct: 347 TYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Query: 300 MVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEAL 359
G V N + ++I G A
Sbjct: 407 SRRGL-------------------------------VGNTVTYTTLIHGFFQASDCDNAQ 435
Query: 360 KMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDL 419
+F +M G+ PN +T+ ++L G +E+ F ++ + P I Y M +
Sbjct: 436 MVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVF-EYLQKSKMEPDIYTYNIMSEG 494
Query: 420 LSKGGLIEDALEMIRGMTF---EPNSFIWGALLSG-CK 453
+ K G +ED ++ ++ +P+ + ++SG CK
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCK 532
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 148/319 (46%), Gaps = 20/319 (6%)
Query: 163 DARKVFDEMPERDAFA----WTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMI 214
+A +F EM + F ++ ++SA + + D ++M N T+N MI
Sbjct: 48 EAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMI 107
Query: 215 DGYAKSGNIECAEILFNRMP----CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
+ + + A + +M +++ +L+ + R + V L +MV G
Sbjct: 108 NCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 167
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
PD V TT++ + ++V G D+ ++I+ K G D +L +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 331 FYKLQV----KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
K++ ++ ++++ID L + + +AL +F+EM+ KGIRP+ T+ S+++ +
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 387 AGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM---TFEPNSF 443
G + SR +S + + I+P + + ++D +K G + +A ++ M + +PN
Sbjct: 288 YGRWSDA-SRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIV 346
Query: 444 IWGALLSGCKLHRNLEIAN 462
+ +L++G +H L+ A
Sbjct: 347 TYNSLINGFCMHDRLDEAQ 365
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 14/224 (6%)
Query: 72 NPNALVYNALLRT-CVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGK 130
+PN + YN+L+ C+H R +A + M+ +P ++++L+ G
Sbjct: 342 DPNIVTYNSLINGFCMH-DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 131 TVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAH 186
+ + +RG + TTL+ + +A+ VF +M + + T++
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 187 VRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DV 238
+ G+++ A +F+ + E + T+N M +G K+G +E LF + K DV
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 239 ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA 282
I++ T+++ + + + TLF +M G PD T+I A
Sbjct: 521 IAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRA 564
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 186/423 (43%), Gaps = 24/423 (5%)
Query: 37 NMIKTNANQDSFLMNQFIAACTTINLATHAFSHMD-------NPNALVYNALLRTCVHCH 89
M++ D+ I N A+ A + +D PN + Y ++
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRG 239
Query: 90 RSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQT 149
+ AL KM + F++++ + + + +G +V +
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYS 299
Query: 150 TLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMPER 205
+L+ G DA ++ +M E+ + + +I A V+ G+ A +L+D+M +R
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 206 ----NSATWNAMIDGYAKSGNIECAEILFNRMPCKD----VISWTTLMTCYSRNKRFGDV 257
+ T+N++++G+ ++ A+ +F M KD V+++ TL+ + ++KR D
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 258 VTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDM 317
LF EM RGL D V TT+I H G ++V ++ +G D+ S L+D
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 318 YAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
G ++++L VF +Q +++ + +MI+G+ G + +F + KG++PN
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 374 GVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMI 433
VT+ ++++ ++E + M ED + P Y ++ + G + E+I
Sbjct: 540 VVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELI 598
Query: 434 RGM 436
R M
Sbjct: 599 REM 601
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 102/492 (20%), Positives = 198/492 (40%), Gaps = 76/492 (15%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ + +N LL + ++ KM R +V Y+++ L+ + +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE----RDAFAWTTMISAHVR 188
G + K G++ + ++L+ Y DA + D+M E D +TT+I
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 189 CGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMP---------- 234
+ A L D M +R N T+ +++G K G+ + A L N+M
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 235 --------CK---------------------DVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
CK +V+++++L++C R+ D L +M+
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
+ + P+ V +I A G ++++ ++ D++ +SL++ + +D
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 326 RSLLVFYKLQVKNLF----CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
++ +F + K+ F +N++I G ++ ++F EM +G+ + VT+ +++
Sbjct: 383 KAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 442
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---F 438
H G + + F M+ D + P I Y ++D L G +E ALE+ M
Sbjct: 443 QGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 439 EPNSFIWGALLSG--------------CKLHRNLEIANVAVQNLMILEPSNSGYYS--LL 482
+ + +I+ ++ G C L NV N MI SG S LL
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI-----SGLCSKRLL 556
Query: 483 VNMYAEVNRWKE 494
YA + + KE
Sbjct: 557 QEAYALLKKMKE 568
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 174/375 (46%), Gaps = 31/375 (8%)
Query: 111 YSFSSLVKACTLLMDSAAGKTVHGHVW-------KRGFDAHVFVQTTLVEFYSMLGLAGD 163
+ F ++ C L+D G +W GF +V+V L+ + G D
Sbjct: 199 HRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISD 258
Query: 164 ARKVFDEMPERD----AFAWTTMISAHVRCGEVDSAARLFDEMPERNSA----TWNAMID 215
A+KVFDE+ +R ++ T+I+ + + G +D RL +M + + T++A+I+
Sbjct: 259 AQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALIN 318
Query: 216 GYAKSGNIECAEILFNRMPCK------DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGL 269
K ++ A LF+ M CK DVI +TTL+ +SRN + + +M+S+GL
Sbjct: 319 ALCKENKMDGAHGLFDEM-CKRGLIPNDVI-FTTLIHGHSRNGEIDLMKESYQKMLSKGL 376
Query: 270 APDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLL 329
PD V T+++ G L + + ++ G D ++LID + + G ++ +L
Sbjct: 377 QPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALE 436
Query: 330 VFYKLQVKNL----FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACT 385
+ ++ + +++++ G+ G +A + EM R GI+P+ VT+ ++ A
Sbjct: 437 IRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFC 496
Query: 386 HAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDA---LEMIRGMTFEPNS 442
G + G M D + P + Y +++ L K G +++A L+ + + P+
Sbjct: 497 KKGDAQTGFKLLKEMQSDGHV-PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDD 555
Query: 443 FIWGALLSGCKLHRN 457
+ LL G H N
Sbjct: 556 ITYNTLLEGHHRHAN 570
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 160/338 (47%), Gaps = 20/338 (5%)
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPERN----SATWNAMIDGYAKSGNIECAEILF 230
+ + + +++ + G + A ++FDE+ +R+ ++N +I+GY K GN++ L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLK 298
Query: 231 NRMPC----KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
++M DV +++ L+ + + LF EM RGL P++V TT+I +
Sbjct: 299 HQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCW 342
G + L KE + ++ G D+ + ++L++ + K G + + + + + L +
Sbjct: 359 GEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITY 418
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
++IDG G + AL++ EM++ GI + V F +++ G V + M+
Sbjct: 419 TTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLR 478
Query: 403 DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE---PNSFIWGALLSG-CKL--HR 456
I P Y M+D K G + ++++ M + P+ + LL+G CKL +
Sbjct: 479 -AGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMK 537
Query: 457 NLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKE 494
N ++ A+ N+ ++ P + Y +LL + N K
Sbjct: 538 NADMLLDAMLNIGVV-PDDITYNTLLEGHHRHANSSKR 574
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 102/265 (38%), Gaps = 19/265 (7%)
Query: 37 NMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDNPNALVYNALLRTCVHCHRSHQ 93
M K+ D F + I A N A F M + + + T +H H +
Sbjct: 300 QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNG 359
Query: 94 AL----ACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQT 149
+ Y KML G+ P +++LV D A + + + +RG T
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYT 419
Query: 150 TLVEFYSMLGLAGDARKVFDEMP----ERDAFAWTTMISAHVRCGEVDSAARLFDEM--- 202
TL++ + G A ++ EM E D ++ ++ + G V A R EM
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 203 -PERNSATWNAMIDGYAKSGNIECAEILFNRMP----CKDVISWTTLMTCYSRNKRFGDV 257
+ + T+ M+D + K G+ + L M V+++ L+ + + +
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 258 VTLFHEMVSRGLAPDEVAMTTVISA 282
L M++ G+ PD++ T++
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEG 564
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 147/340 (43%), Gaps = 51/340 (15%)
Query: 105 GVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDA 164
G+ P +Y++++++ A D + + V + K G + T L+E G DA
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDA 313
Query: 165 RKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDG 216
K+FDEM ER D +T++IS + R G + A LFDE+ E+ +S T+ A+IDG
Sbjct: 314 EKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDG 373
Query: 217 YAKSGNIECAEILFNRMPCKDV----ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPD 272
K G + AEIL N M K V + + TL+ Y R + ++ M +G D
Sbjct: 374 VCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQAD 433
Query: 273 EVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFY 332
T+ S L K+ +M G L ++LID+Y K G+++ + +F
Sbjct: 434 VFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFV 493
Query: 333 KLQVK----NLFCWNSMIDGLATHGYAKEA------------------------------ 358
++ K N +N MI G KEA
Sbjct: 494 EMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIAD 553
Query: 359 -----LKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEG 393
+++FSEM KG+ N VT+ +++ + AG +E
Sbjct: 554 NVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 154/349 (44%), Gaps = 53/349 (15%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVK-MLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
P A YN ++ V R + +K M ++GVV +++ L++ + +
Sbjct: 257 PEAYTYNTIINAYVK-QRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEK 315
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHV 187
+ + +RG ++ V V T+L+ + G A +FDE+ E+ ++ + +I
Sbjct: 316 LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVC 375
Query: 188 RCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVI 239
+ GE+ +A L +EM + +N +IDGY + G ++ A ++++ M K DV
Sbjct: 376 KVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVF 435
Query: 240 SWTTLMTCYSRNKRFGDVVT-----------------------------------LFHEM 264
+ T+ +C++R KR+ + LF EM
Sbjct: 436 TCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEM 495
Query: 265 VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSI 324
S+G+ P+ + +I A G + +++ + NG D Y +SLI ++
Sbjct: 496 SSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNV 555
Query: 325 DRSLLVFYKLQVKNL----FCWNSMIDGLATHGYAKEALKMFSEMERKG 369
D ++ +F ++ +K L + MI GL+ G + EA ++ EM+RKG
Sbjct: 556 DEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKG 604
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 195/416 (46%), Gaps = 38/416 (9%)
Query: 81 LLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVK-ACTLLMDSAAGKTVHGH---- 135
L R C+++ A+ + + GV S++ ++ C L G+ H
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQL------GRIKEAHHLLL 270
Query: 136 -VWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCG 190
+ +G+ V +T+V Y G K+ + M + +++ + ++I R
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 191 EVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKD----VISWT 242
++ A F EM + ++ + +IDG+ K G+I A F M +D V+++T
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 243 TLMTCYSRNKRFGDVV---TLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
+++ + + GD+V LFHEM +GL PD V T +I+ G + VH+++
Sbjct: 391 AIISGFCQ---IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 300 MVNGFGLDVYIGSSLIDMYAKCGSIDRS---LLVFYKLQVK-NLFCWNSMIDGLATHGYA 355
+ G +V ++LID K G +D + L +K+ ++ N+F +NS+++GL G
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGC 415
+EA+K+ E E G+ + VT+ +++ A +G +++ + M+ + P I +
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNV 566
Query: 416 MVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSGCKLHRNLEIANVAVQNL 468
+++ G++ED +++ M PN+ + +L+ + NL+ A +++
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 140/326 (42%), Gaps = 51/326 (15%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
PN+ +Y +++ + +A + +M+R G++P +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT--------------------- 351
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHV 187
V TTL++ + G A K F EM R D +T +IS
Sbjct: 352 --------------VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 188 RCGEVDSAARLFDEM----PERNSATWNAMIDGYAKSGNIECAEILFNRMP----CKDVI 239
+ G++ A +LF EM E +S T+ +I+GY K+G+++ A + N M +V+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 240 SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
++TTL+ + L HEM GL P+ ++++ G + ++
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 300 MVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATHGYA 355
G D ++L+D Y K G +D++ + ++ K L +N +++G HG
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVL 381
++ K+ + M KGI PN TF S++
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 152/385 (39%), Gaps = 41/385 (10%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAA-CT--TINLATHAFSHMDN----PNALVYNALLRT 84
E ++ MI+ D+ + I C I A+ F M + P+ L Y A++
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 85 CVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
+A + +M G+ P S +F+ L+ VH H+ + G +
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEM----PERDAFAWTTMISAHVRCGEVDSAARLFD 200
V TTL++ G A ++ EM + + F + ++++ + G ++ A +L
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 201 EMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNK 252
E ++ T+ ++D Y KSG ++ A+ + M K ++++ LM + +
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
D L + M+++G+AP+ +++ L ++ + G G D
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 313 SLIDMYAKCGSIDRSLLVFYK--------------------LQVKNLFCWNSMIDGLATH 352
+L+ + K ++ + +F + L+ K + D +
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 353 GYA--KEALKMFSEMERKGIRPNGV 375
G A KE FS+ + KG RP+ +
Sbjct: 696 GLAADKEIFDFFSDTKYKGKRPDTI 720
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 174/442 (39%), Gaps = 71/442 (16%)
Query: 125 DSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLA----GDARKVFDEMPERDAFAWT 180
D +++ W+R + V + V+F+ +L G +VFD
Sbjct: 134 DLKVAQSLISSFWER---PKLNVTDSFVQFFDLLVYTYKDWGSDPRVFD----------- 179
Query: 181 TMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIEC-----AEILFNRMP- 234
V G + A R+F++M + Y + +C A I+F P
Sbjct: 180 VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE 239
Query: 235 ---CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGAL-- 289
C +V S+ ++ + R + L M +G PD ++ +TV++ G L
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299
Query: 290 -----------GL----------------------GKEVHHYLMVNGFGLDVYIGSSLID 316
GL +E ++ G D + ++LID
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 317 MYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATHGYAKEALKMFSEMERKGIRP 372
+ K G I + FY++ +++ + ++I G G EA K+F EM KG+ P
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 373 NGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM 432
+ VTF ++ AG +++ MI+ C SP + Y ++D L K G ++ A E+
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC-SPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 433 IRGM---TFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILE-PSNSGYYSLLVNMYAE 488
+ M +PN F + ++++G N+E A V +++ Y+ L++ Y +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 489 VNRWKEVSKIRIAMKDLGVEKT 510
+ +I M G++ T
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPT 560
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/416 (22%), Positives = 195/416 (46%), Gaps = 38/416 (9%)
Query: 81 LLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVK-ACTLLMDSAAGKTVHGH---- 135
L R C+++ A+ + + GV S++ ++ C L G+ H
Sbjct: 217 LTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQL------GRIKEAHHLLL 270
Query: 136 -VWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCG 190
+ +G+ V +T+V Y G K+ + M + +++ + ++I R
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 191 EVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKD----VISWT 242
++ A F EM + ++ + +IDG+ K G+I A F M +D V+++T
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 243 TLMTCYSRNKRFGDVV---TLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
+++ + + GD+V LFHEM +GL PD V T +I+ G + VH+++
Sbjct: 391 AIISGFCQ---IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 300 MVNGFGLDVYIGSSLIDMYAKCGSIDRS---LLVFYKLQVK-NLFCWNSMIDGLATHGYA 355
+ G +V ++LID K G +D + L +K+ ++ N+F +NS+++GL G
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGC 415
+EA+K+ E E G+ + VT+ +++ A +G +++ + M+ + P I +
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK-GLQPTIVTFNV 566
Query: 416 MVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSGCKLHRNLEIANVAVQNL 468
+++ G++ED +++ M PN+ + +L+ + NL+ A +++
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 140/326 (42%), Gaps = 51/326 (15%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
PN+ +Y +++ + +A + +M+R G++P +
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDT--------------------- 351
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHV 187
V TTL++ + G A K F EM R D +T +IS
Sbjct: 352 --------------VVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFC 397
Query: 188 RCGEVDSAARLFDEM----PERNSATWNAMIDGYAKSGNIECAEILFNRMP----CKDVI 239
+ G++ A +LF EM E +S T+ +I+GY K+G+++ A + N M +V+
Sbjct: 398 QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVV 457
Query: 240 SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
++TTL+ + L HEM GL P+ ++++ G + ++
Sbjct: 458 TYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF 517
Query: 300 MVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATHGYA 355
G D ++L+D Y K G +D++ + ++ K L +N +++G HG
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVL 381
++ K+ + M KGI PN TF S++
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLV 603
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 152/385 (39%), Gaps = 41/385 (10%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAA-CT--TINLATHAFSHMDN----PNALVYNALLRT 84
E ++ MI+ D+ + I C I A+ F M + P+ L Y A++
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 85 CVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
+A + +M G+ P S +F+ L+ VH H+ + G +
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEM----PERDAFAWTTMISAHVRCGEVDSAARLFD 200
V TTL++ G A ++ EM + + F + ++++ + G ++ A +L
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 201 EMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNK 252
E ++ T+ ++D Y KSG ++ A+ + M K ++++ LM + +
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
D L + M+++G+AP+ +++ L ++ + G G D
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYE 635
Query: 313 SLIDMYAKCGSIDRSLLVFYK--------------------LQVKNLFCWNSMIDGLATH 352
+L+ + K ++ + +F + L+ K + D +
Sbjct: 636 NLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Query: 353 GYA--KEALKMFSEMERKGIRPNGV 375
G A KE FS+ + KG RP+ +
Sbjct: 696 GLAADKEIFDFFSDTKYKGKRPDTI 720
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/442 (21%), Positives = 174/442 (39%), Gaps = 71/442 (16%)
Query: 125 DSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLA----GDARKVFDEMPERDAFAWT 180
D +++ W+R + V + V+F+ +L G +VFD
Sbjct: 134 DLKVAQSLISSFWER---PKLNVTDSFVQFFDLLVYTYKDWGSDPRVFD----------- 179
Query: 181 TMISAHVRCGEVDSAARLFDEMPERNSATWNAMIDGYAKSGNIEC-----AEILFNRMP- 234
V G + A R+F++M + Y + +C A I+F P
Sbjct: 180 VFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPE 239
Query: 235 ---CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGAL-- 289
C +V S+ ++ + R + L M +G PD ++ +TV++ G L
Sbjct: 240 VGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDK 299
Query: 290 -----------GL----------------------GKEVHHYLMVNGFGLDVYIGSSLID 316
GL +E ++ G D + ++LID
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 317 MYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATHGYAKEALKMFSEMERKGIRP 372
+ K G I + FY++ +++ + ++I G G EA K+F EM KG+ P
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 373 NGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM 432
+ VTF ++ AG +++ MI+ C SP + Y ++D L K G ++ A E+
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC-SPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 433 IRGM---TFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMILE-PSNSGYYSLLVNMYAE 488
+ M +PN F + ++++G N+E A V +++ Y+ L++ Y +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCK 538
Query: 489 VNRWKEVSKIRIAMKDLGVEKT 510
+ +I M G++ T
Sbjct: 539 SGEMDKAQEILKEMLGKGLQPT 560
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 114/512 (22%), Positives = 220/512 (42%), Gaps = 63/512 (12%)
Query: 34 VYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDNPNAL-----VYNALLRTCVHC 88
++ +M+K+ N+ ++A +N S + L +Y + C
Sbjct: 70 LFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFC 129
Query: 89 HRSHQ--ALACYVKMLRNGVVPTSYSFSSLVKA-CTLLMDSAAGKTVHGHVWKRGFDAHV 145
RS ALA KM++ G P + SSL+ C S A V V + G+
Sbjct: 130 RRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-EMGYKPDT 188
Query: 146 FVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDE 201
F TTL+ + A +A + D+M +R D + T+++ + G++D A L +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 202 MP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKR 253
M E + +N +IDG K +++ A LF M K DV ++++L++C R
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 254 FGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSS 313
+ D L +M+ R + P+ V + +I A G L ++++ ++ D++ SS
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 314 LIDMYAKCGSIDRSLLVFYKLQVKNLF----CWNSMIDGLATHGYAKEALKMFSEMERKG 369
LI+ + +D + +F + K+ F ++++I G +E +++F EM ++G
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRG 428
Query: 370 IRPNGVTFVSVLTA------CTHA------------------------GFVEEGRSRFVS 399
+ N VT+ +++ C +A G + G+
Sbjct: 429 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 488
Query: 400 MIEDY----CISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE---PNSFIWGALLSGC 452
++ +Y + P I Y M++ + K G +ED E+ ++ + PN + ++SG
Sbjct: 489 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGF 548
Query: 453 KLHRNLEIANVAVQNLMILEP-SNSGYYSLLV 483
+ E A+ ++ + P NSG Y+ L+
Sbjct: 549 CRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 188/423 (44%), Gaps = 24/423 (5%)
Query: 37 NMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDN-------PNALVYNALLRTCVHCH 89
M++ D+F I N A+ A + +D P+ + Y ++
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 90 RSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQT 149
AL+ KM + + +++++ + + +G VF +
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 150 TLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMPER 205
+L+ G DA ++ +M ER + ++ +I A V+ G++ A +L+DEM +R
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 206 ----NSATWNAMIDGYAKSGNIECAEILFNRMPCKD----VISWTTLMTCYSRNKRFGDV 257
+ T++++I+G+ ++ A+ +F M KD V++++TL+ + + KR +
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 258 VTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDM 317
+ LF EM RGL + V TT+I + V ++ G ++ + L+D
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDG 477
Query: 318 YAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
K G + ++++VF LQ +++ +N MI+G+ G ++ ++F + KG+ PN
Sbjct: 478 LCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 374 GVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMI 433
+ + ++++ G EE S M ED + P Y ++ + G E + E+I
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELI 596
Query: 434 RGM 436
+ M
Sbjct: 597 KEM 599
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 168/355 (47%), Gaps = 27/355 (7%)
Query: 163 DARKVFDEMPERDAFA----WTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMI 214
DA +F +M + F + ++SA + + + L ++M + T++ I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 215 DGYAKSGNIECAEILFNRM------PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRG 268
+ + + + A + +M P D+++ ++L+ Y +KR D V L +MV G
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 269 LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSL 328
PD TT+I + ++ G D+ ++++ K G ID +L
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 329 LVFYKLQV----KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
+ K++ ++ +N++IDGL + + +AL +F+EM+ KGIRP+ T+ S+++
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 385 THAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM---TFEPN 441
+ G + SR +S + + I+P + + ++D K G + +A ++ M + +P+
Sbjct: 304 CNYGRWSDA-SRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMILEP--SNSGYYSLLVNMYAEVNRWKE 494
F + +L++G +H L+ A + LMI + N YS L+ + + R +E
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 113/216 (52%), Gaps = 2/216 (0%)
Query: 247 CYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL 306
C N R + V + + ++G A D + + + C AL + VH ++
Sbjct: 95 CIQGNWR--EAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVSPC 152
Query: 307 DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEME 366
DV +++I+MY+ C S+D +L VF ++ N M+ +GY +EA+ +F+ +
Sbjct: 153 DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFK 212
Query: 367 RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLI 426
+G +PNG F V + CT G V+EG +F +M +Y I P +EHY + +L+ G +
Sbjct: 213 EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 427 EDALEMIRGMTFEPNSFIWGALLSGCKLHRNLEIAN 462
++AL + M EP+ +W L++ ++H ++E+ +
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGD 308
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/433 (23%), Positives = 187/433 (43%), Gaps = 29/433 (6%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
N + Y L+ R +A+ +VKM + PT +++ L+K+ + +
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRC 189
+ + G ++ T L++ AR++ +M E+ + + +I+ + +
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406
Query: 190 GEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRM----PCKDVISW 241
G ++ A + + M R N+ T+N +I GY KS N+ A + N+M DV+++
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTY 465
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
+L+ R+ F L M RGL PD+ T++I + + ++ L
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 302 NGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATHGYAKE 357
G +V + ++LID Y K G +D + L+ K+ KN +N++I GL G KE
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 358 ALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMV 417
A + +M + G++P T ++ G + SRF M+ P Y +
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFI 644
Query: 418 DLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSGCKLHRNLEIANVAVQNLMIL--- 471
+ G + DA +M+ M P+ F + +L+ G + +L N A L +
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG---YGDLGQTNFAFDVLKRMRDT 701
Query: 472 --EPSNSGYYSLL 482
EPS + SL+
Sbjct: 702 GCEPSQHTFLSLI 714
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 165/393 (41%), Gaps = 21/393 (5%)
Query: 78 YNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVW 137
YN LL + + Y++ML + V P Y+++ +V L + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 138 KRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP----ERDAFAWTTMISAHVRCGEVD 193
+ G D F T+L+ Y A KVF+EMP R+ A+T +I +D
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 194 SAARLFDEMPERNS----ATWNAMIDGYAKSGNIECAEILFNRMP----CKDVISWTTLM 245
A LF +M + T+ +I S A L M ++ ++T L+
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 246 TCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFG 305
+F L +M+ +GL P+ + +I+ G + +V +
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 306 LDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKEALKM 361
+ + LI Y K ++ +++ V K+ + ++ +NS+IDG G A ++
Sbjct: 426 PNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 362 FSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLS 421
S M +G+ P+ T+ S++ + + VEE F S+ E ++P + Y ++D
Sbjct: 485 LSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNVVMYTALIDGYC 543
Query: 422 KGGLIEDALEMIRGMTFE---PNSFIWGALLSG 451
K G +++A M+ M + PNS + AL+ G
Sbjct: 544 KAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 126/330 (38%), Gaps = 62/330 (18%)
Query: 65 HAFSHMDN-------PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLV 117
HA+S P+A Y ++T R A KM NGV P +++SSL+
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 118 KACTLLMDSAAGKTVHG-HVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDA 176
K L G+T V KR D + + F S++ + + + E +
Sbjct: 680 KGYGDL-----GQTNFAFDVLKRMRDTGC--EPSQHTFLSLIKHLLEMKYGKQKGSEPEL 732
Query: 177 FAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNR 232
A + M+ E D+ L ++M E N+ ++ +I G + GN+ AE +F+
Sbjct: 733 CAMSNMM-------EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDH 785
Query: 233 MPCKDVIS-----WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLG 287
M + IS + L++C + K+ + + +M+ G P + +I G
Sbjct: 786 MQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG 845
Query: 288 ALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMID 347
G V L+ +CG + L W +ID
Sbjct: 846 EKERGTSVFQNLL-------------------QCGYYEDEL------------AWKIIID 874
Query: 348 GLATHGYAKEALKMFSEMERKGIRPNGVTF 377
G+ G + ++F+ ME+ G + + T+
Sbjct: 875 GVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/430 (24%), Positives = 196/430 (45%), Gaps = 43/430 (10%)
Query: 4 FQHC---KIHTLKDKILDQIKRCSKREKKTLESVYA-NMIKTNANQDSFLMNQFIAACTT 59
FQ C +++ K+K+LD++ + + ++Y ++ + N +++ M + +
Sbjct: 206 FQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK---- 261
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
H PN Y+A++ QA Y ++L ++P F +LV
Sbjct: 262 --------KHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG 313
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE----RD 175
+ +++ H+ K G D +++V L+ + G +A + EM D
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEMP-ER---NSATWNAMIDGYAKSGNIECAEILFN 231
F +T +I+ +V A RLF +M ER +SAT+N++I GY K N+E A L +
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433
Query: 232 RMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLG 287
M ++I+++TL+ Y + + L+ EM +G+ PD V T +I A H
Sbjct: 434 EMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA--HFK 491
Query: 288 ALGLGKEVHHY--LMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWN-- 343
+ + + Y ++ G + + + L+D + K G + ++ FY+ + CWN
Sbjct: 492 EANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAI-DFYQENNQQRSCWNHV 550
Query: 344 ---SMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSM 400
+I+GL +GY A + FS+M GI P+ ++VS+L G ++E R M
Sbjct: 551 GFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSML-----KGHLQEKRITDTMM 605
Query: 401 IEDYCISPGI 410
++ I GI
Sbjct: 606 LQCDMIKTGI 615
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 159/373 (42%), Gaps = 61/373 (16%)
Query: 118 KACTLLMDSAAGKTVHGHVW-------KRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDE 170
KAC +++ + VW RG V + L + GL K+ DE
Sbjct: 165 KACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDE 224
Query: 171 MP----ERDAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGN 222
M + + + +T I R +++ A ++F+ M + N T++AMIDGY K+GN
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284
Query: 223 IECA-----EILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVA-- 275
+ A EIL + +V+ + TL+ + + + +LF MV G+ P+
Sbjct: 285 VRQAYGLYKEILVAEL-LPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343
Query: 276 -----------MTTVISACAHLGALGLGKEVHHY-LMVNGFGLDVYIG------------ 311
M + + + +L L +V Y +++NG ++ +
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 312 ---------SSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEA 358
+SLI Y K +++++L + ++ N+ ++++IDG K A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463
Query: 359 LKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVD 418
+ ++ EM KGI P+ VT+ +++ A ++E + M+E I P + C+VD
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA-GIHPNDHTFACLVD 522
Query: 419 LLSKGGLIEDALE 431
K G + A++
Sbjct: 523 GFWKEGRLSVAID 535
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 139/309 (44%), Gaps = 16/309 (5%)
Query: 197 RLFDEM-----PERNSATWNAMIDGYAKSGNIECAEILFNRMPCK-DVISWTTLMTCYSR 250
RLF+ + P+ + ++ +I + + G E A + M C D + +++ R
Sbjct: 117 RLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCSPDSKACLSILNGLVR 176
Query: 251 NKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI 310
+RF V + M+SRGL PD + C G +++ + G +VYI
Sbjct: 177 RRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYI 236
Query: 311 GSSLIDMYAKCGSIDRSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKEALKMFSEME 366
+ I + ++ + +F ++ + NL+ +++MIDG G ++A ++ E+
Sbjct: 237 YTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEIL 296
Query: 367 RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLI 426
+ PN V F +++ A + RS FV M++ + + P + Y C++ K G +
Sbjct: 297 VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK-FGVDPNLYVYNCLIHGHCKSGNM 355
Query: 427 EDALEMIRGM---TFEPNSFIWGALLSGCKLHRNLEIANVAVQNLM--ILEPSNSGYYSL 481
+A+ ++ M P+ F + L++G + + AN Q + + PS++ Y SL
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415
Query: 482 LVNMYAEVN 490
+ E N
Sbjct: 416 IHGYCKEYN 424
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 98/227 (43%), Gaps = 18/227 (7%)
Query: 63 ATHAFSHMDN----PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVK 118
A F M N P++ YN+L+ + QAL +M +GV P +FS+L+
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 119 ACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE----R 174
+ D A ++ + +G V T L++ + +A +++ +M E
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATWN-----AMIDGYAKSGNIECAEIL 229
+ + ++ + G + A + E ++ S WN +I+G ++G I A
Sbjct: 513 NDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSC-WNHVGFTCLIEGLCQNGYILRASRF 571
Query: 230 FNRMP----CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPD 272
F+ M D+ S+ +++ + + KR D + L +M+ G+ P+
Sbjct: 572 FSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 198/476 (41%), Gaps = 29/476 (6%)
Query: 60 INLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA 119
+NL +PN VYNAL+ + + H+A + +M + G+ P ++S L+
Sbjct: 352 LNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDM 411
Query: 120 CTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP----ERD 175
+ G + G V+ +L+ + G A EM E
Sbjct: 412 FCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 176 AFAWTTMISAHVRCGEVDSAARLFDEMPERNSA----TWNAMIDGYAKSGNIECAEILFN 231
+T+++ + G+++ A RL+ EM + A T+ ++ G ++G I A LFN
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 232 RMPCKDV----ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLG 287
M +V +++ ++ Y EM +G+ PD + +I G
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 288 ALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWN 343
K L L+ + L+ + + G ++ +L V ++ + +L C+
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 344 SMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
+IDG H K + EM +G++P+ V + S++ A + G +E + MI +
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 404 YCISPGIEHYGCMVDLLSKGGLIEDALEM---IRGMTFEPNSFIWGALLS-----GCKLH 455
C+ P Y +++ L K G + +A + ++ ++ PN +G L +
Sbjct: 712 GCV-PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Query: 456 RNLEIANVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTC 511
+ +E+ N ++ L+ +N+ Y++L+ + R +E S++ M GV C
Sbjct: 771 KAVELHNAILKGLL----ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 179/419 (42%), Gaps = 28/419 (6%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P +ALL V A+ + M+ G+ P Y ++ ++++ L D + K +
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 133 HGHVWKRGFDAHVFVQTTLVE-------FYSMLGLAGD-ARKVFDEMPERDAFAWTTMIS 184
H+ G D ++ L++ + +G+ D A K D P D + T++
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK--DLKP--DVVTYCTLVY 305
Query: 185 AHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMP----CK 236
+ E + + DEM + A +++++G K G IE A L R+
Sbjct: 306 GLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSP 365
Query: 237 DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVH 296
++ + L+ + ++F + LF M GL P++V + +I G L
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 297 HYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATH 352
++ G L VY +SLI+ + K G I + ++ K L + S++ G +
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 353 GYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH 412
G +AL+++ EM KGI P+ TF ++L+ AG + + F M E + + P
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAE-WNVKPNRVT 544
Query: 413 YGCMVDLLSKGGLIEDALEMIRGMTFE---PNSFIWGALLSGCKLHRNLEIANVAVQNL 468
Y M++ + G + A E ++ MT + P+++ + L+ G L A V V L
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGL 603
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 139/334 (41%), Gaps = 18/334 (5%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
PN + YN ++ +A +M G+VP +YS+ L+ L ++ K
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHV 187
+ K + + T L+ + G +A V EM +R D + +I +
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 188 RCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECA----EILFNRMPCKDVI 239
+ + L EM +R + + +MID +K+G+ + A +++ N + +
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 240 SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVH-HY 298
++T ++ + + L +M P++V + G + + K V H
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDMQKAVELHN 777
Query: 299 LMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL----QVKNLFCWNSMIDGLATHGY 354
++ G + + LI + + G I+ + + ++ + + +MI+ L
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 355 AKEALKMFSEMERKGIRPNGVTFVSVLTACTHAG 388
K+A+++++ M KGIRP+ V + +++ C AG
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAG 871
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 4/103 (3%)
Query: 206 NSATWNAMIDGYAKSGNIECAEILFNRM----PCKDVISWTTLMTCYSRNKRFGDVVTLF 261
N+AT+N +I G+ + G IE A L RM D I++TT++ R + L+
Sbjct: 786 NTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELW 845
Query: 262 HEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGF 304
+ M +G+ PD VA T+I C G +G E+ + ++ G
Sbjct: 846 NSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGL 888
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 174/384 (45%), Gaps = 30/384 (7%)
Query: 63 ATHAFSHMDN----PNALVYNALLRTCVHCHRSHQALA--CYVKMLRNGVVPTSYSFSSL 116
AT S M++ PN + YN ++ HC + + LA + +L G+ P +Y++S L
Sbjct: 462 ATELLSKMESRGIGPNVVSYNNVM--LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Query: 117 VKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDA 176
+ C D V H+ + + V T++ +G AR++ M E
Sbjct: 520 IDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 579
Query: 177 F-----AWTTMISAHVRCGEVDSAARLFDEM----PERNSATWNAMIDGYAKSGNIECAE 227
++ ++I + GE+DSA ++EM N T+ ++++G K+ ++ A
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 228 ILFNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISAC 283
+ + M K D+ ++ L+ + + LF E++ GL P + ++IS
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 284 AHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ----VKNL 339
+LG + +++ ++ +G D+ ++LID K G++ + ++ ++Q V +
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 340 FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVS 399
+ +++GL+ G + +KMF EM++ + PN + + +V+ AG EG
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVI-----AGHYREGNLDEAF 814
Query: 400 MIEDYCISPGIEHYGCMVDLLSKG 423
+ D + GI G D+L G
Sbjct: 815 RLHDEMLDKGILPDGATFDILVSG 838
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 178/397 (44%), Gaps = 22/397 (5%)
Query: 81 LLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRG 140
L+R + + +AL + + G P S +S V+AC +D A ++ + ++
Sbjct: 239 LMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKK 298
Query: 141 FDAHVFVQTTLVEFYSM-LGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSA 195
T V S+ G DA ++ DEM + A T++I+ H + ++ SA
Sbjct: 299 LCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSA 358
Query: 196 ARLFDEM----PERNSATWNAMIDGYAKSGNIECAEILFNRMPC----KDVISWTTLMTC 247
LFD+M P NS T++ +I+ + K+G +E A + +M V T++
Sbjct: 359 LVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQG 418
Query: 248 YSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLD 307
+ + ++ + + LF E GLA + T++S G E+ + G G +
Sbjct: 419 WLKGQKHEEALKLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPN 477
Query: 308 VYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATHGYAKEALKMFS 363
V ++++ + + ++D + +VF + K L + ++ +IDG + + AL++ +
Sbjct: 478 VVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVN 537
Query: 364 EMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKG 423
M I NGV + +++ G + R +MIE+ + Y ++D K
Sbjct: 538 HMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKE 597
Query: 424 GLIEDAL---EMIRGMTFEPNSFIWGALLSG-CKLHR 456
G ++ A+ E + G PN + +L++G CK +R
Sbjct: 598 GEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/500 (21%), Positives = 213/500 (42%), Gaps = 65/500 (13%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVP----TSYSFSSLVKACTLLMDSAAG 129
N+ +N LL ++ A+ +ML V+P + + S+LV+ +L
Sbjct: 162 NSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSL----TEA 217
Query: 130 KTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISA 185
K ++ + G D L+ +A +V ER D+ ++ + A
Sbjct: 218 KELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 186 HVRCGEVDSAARLFDEMPER-----NSATWNAMIDGYAKSGNIECAEILFNRMPCK---- 236
+ ++ A L EM E+ + T+ ++I K GN++ A L + M
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 237 DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVH 296
+V++ T+L+T + +N + LF +M G +P+ V + +I G + E +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 297 HYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVF---YKLQVKNLFCWNSMIDGLATHG 353
+ V G V+ ++I + K + +L +F ++ + N+F N+++ L G
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQG 457
Query: 354 YAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHY 413
EA ++ S+ME +GI PN V++ +V+ ++ R F +++E + P Y
Sbjct: 458 KTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK-GLKPNNYTY 516
Query: 414 GCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSG-CKLHRNLE----IANVAV 465
++D + ++ALE++ MT E N ++ +++G CK+ + + +AN+
Sbjct: 517 SILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIE 576
Query: 466 Q----------NLMI--------LEPSNSGY--------------YSLLVNMYAEVNRWK 493
+ N +I ++ + + Y Y+ L+N + NR
Sbjct: 577 EKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMD 636
Query: 494 EVSKIRIAMKDLGVEKTCPG 513
+ ++R MK+ GV+ P
Sbjct: 637 QALEMRDEMKNKGVKLDIPA 656
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/296 (20%), Positives = 129/296 (43%), Gaps = 22/296 (7%)
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFDEMPERNSATW----NAMIDGYAKSGNIECAEI 228
E ++ A+ +++A+ + + D A + ++M E + + N + + ++ A+
Sbjct: 160 EVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKE 219
Query: 229 LFNRMPC----KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACA 284
L++RM D ++ LM R ++ + + + + RG PD + + + AC
Sbjct: 220 LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACC 279
Query: 285 HLGALGLGKEVHHYLMVNGF---GLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK---- 337
L + + + + Y +S+I K G++D ++ + ++
Sbjct: 280 KTLDLAMANSLLREMKEKKLCVPSQETY--TSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 338 NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRF 397
N+ S+I G + AL +F +ME++G PN VTF ++ G +E+ F
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKAL-EF 396
Query: 398 VSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFE---PNSFIWGALLS 450
+E ++P + H ++ KG E+AL++ +FE N F+ +LS
Sbjct: 397 YKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLF-DESFETGLANVFVCNTILS 451
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 192/474 (40%), Gaps = 28/474 (5%)
Query: 5 QHCKIHTLKDKILDQIKRCSKREKKTLESVY--ANMIKTNANQDSFLMNQFIAACTTINL 62
QH + +D + +I S R +ES++ M++ N D L + I T+
Sbjct: 80 QHSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN 139
Query: 63 ATHAFSHMD------NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSL 116
A M+ P+ YNAL+ +R A +M P + +++ +
Sbjct: 140 IPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 199
Query: 117 VKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER-- 174
+ + V + V T L+E + G +A K+ DEM R
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 175 --DAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEI 228
D F + T+I + G VD A + + E + ++N ++ G E E
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEK 319
Query: 229 LFNRM---PC-KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACA 284
L +M C +V++++ L+T R+ + + + L M +GL PD + +I+A
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 285 HLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ----VKNLF 340
G L + E ++ +G D+ ++++ K G D++L +F KL N
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 341 CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSM 400
+N+M L + G AL M EM GI P+ +T+ S+++ G V+E V M
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 401 IEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSG 451
P + Y ++ K IEDA+ ++ M PN + L+ G
Sbjct: 500 -RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/414 (21%), Positives = 183/414 (44%), Gaps = 20/414 (4%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
N N ++ C ++ A + K+++ G P + +F++L+K L + +
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLV 181
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRC 189
+ + G V ++V G A + +M ER D F ++T+I + R
Sbjct: 182 DRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRD 241
Query: 190 GEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKD----VISW 241
G +D+A LF EM + + T+N+++ G K+G +L M ++ VI++
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
L+ + + + + L+ EM++RG++P+ + T++ L + ++
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361
Query: 302 NGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKE 357
N D+ +SLI Y +D + VF + V N ++ ++ G G K
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421
Query: 358 ALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMV 417
A ++F EM G+ P+ +T+ +L G +E+ F + + + GI Y ++
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL-QKSKMDLGIVMYTTII 480
Query: 418 DLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSGCKLHRNLEIANVAVQNL 468
+ + KGG +EDA + + +PN + ++SG +L AN+ ++ +
Sbjct: 481 EGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKM 534
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 98/471 (20%), Positives = 196/471 (41%), Gaps = 63/471 (13%)
Query: 20 IKRCSKREKKTLESVYANMIKTNANQDSFL--MNQFIAACTTINLATHAFSHMDNPNALV 77
IKR K L + +++KT + + L ++ F ++C FS + N N +
Sbjct: 3 IKRSITTNMKALRLIQPHLLKTGSLRTDLLCTISSFFSSCE------RDFSSISNGN-VC 55
Query: 78 YNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSL------VKACTLLMD------ 125
+ LR+ + + A+A + +M+R+ +P+ FS K L++D
Sbjct: 56 FRERLRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLE 115
Query: 126 -----------------------SAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAG 162
+ +V G V K G++ TL++ + G
Sbjct: 116 LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS 175
Query: 163 DARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMPERNSA----TWNAMI 214
+A + D M E D + ++++ R G+ A L +M ERN T++ +I
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 215 DGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
D + G I+ A LF M K V+++ +L+ + ++ D L +MVSR +
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIV 295
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRS--- 327
P+ + ++ G L E++ ++ G ++ ++L+D Y + +
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 328 --LLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACT 385
L+V K ++ + S+I G + +K+F + ++G+ N VT+ ++
Sbjct: 356 LDLMVRNKCS-PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 386 HAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
+G ++ F M+ + + P + YG ++D L G +E ALE+ +
Sbjct: 415 QSGKIKLAEELFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL 464
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 167/396 (42%), Gaps = 27/396 (6%)
Query: 33 SVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMD-------NPNALVYNALLRTC 85
SV ++K D+ N I + A +D P+ + YN+++
Sbjct: 144 SVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 86 VHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSA--AGKTVHGHVWKRGFDA 143
+ AL KM V +++S+++ + L D A ++ + +G +
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS--LCRDGCIDAAISLFKEMETKGIKS 261
Query: 144 HVFVQTTLVEFYSMLGLAGDARKVFDEMPERD----AFAWTTMISAHVRCGEVDSAARLF 199
V +LV G D + +M R+ + ++ V+ G++ A L+
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 200 DEMPER----NSATWNAMIDGYAKSGNIECAEILFN---RMPCK-DVISWTTLMTCYSRN 251
EM R N T+N ++DGY + A + + R C D++++T+L+ Y
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 252 KRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIG 311
KR D + +F + RGL + V + ++ G + L +E+ ++ +G DV
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATHGYAKEALKMFSEMER 367
L+D G ++++L +F LQ + + ++I+G+ G ++A +F +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 368 KGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
KG++PN +T+ +++ G + E M ED
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 12/258 (4%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
+PN + YN L+ +R +A M+RN P +F+SL+K ++ G
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHV 187
V ++ KRG A+ + LV+ + G A ++F EM D + ++
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 188 RCGEVDSAARLFDEMPERNS----ATWNAMIDGYAKSGNIECAEILFNRMPCK----DVI 239
G+++ A +F+++ + + +I+G K G +E A LF +PCK +V+
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 240 SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL 299
++T +++ + + L +M G AP++ T+I A G L ++ +
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Query: 300 MVNGFGLDVYIGSSLIDM 317
GF D +IDM
Sbjct: 570 KSCGFSADASSIKMVIDM 587
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/412 (22%), Positives = 179/412 (43%), Gaps = 53/412 (12%)
Query: 78 YNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVK------------------- 118
Y +LR +H + ++AL + M+ + +P+ F+ L+
Sbjct: 40 YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99
Query: 119 ---------ACTLLMD-------SAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAG 162
C LLM+ + G + K GF+ + T+L+ + +
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRME 159
Query: 163 DARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMI 214
+A + ++M E D +TT+I + + G V+ A LFD+M + + +++
Sbjct: 160 EAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLV 219
Query: 215 DGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLA 270
+G SG A+ L M + DVI++ L+ + + +F D L++EM+ +A
Sbjct: 220 NGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIA 279
Query: 271 PDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLV 330
P+ T++I+ G + +++ + + G DV +SLI+ + KC +D ++ +
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 331 FYKLQVK----NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTH 386
FY++ K N + ++I G G A ++FS M +G+ PN T+ +L +
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 387 AGFVEEGRSRFVSMI--EDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
G V++ F M E ++P I Y ++ L G +E AL + M
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/385 (20%), Positives = 169/385 (43%), Gaps = 54/385 (14%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ + + +L+ +R +A++ +M+ G+ P +++++ + ++
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVR 188
+ G V + T+LV G DA + M +R D + +I A V+
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 189 CGEVDSAARLFDEMPERNSA----TWNAMIDGYAKSGNIECAEILFNRMPCK----DVIS 240
G+ A L++EM + A T+ ++I+G+ G ++ A +F M K DV++
Sbjct: 260 EGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVA 319
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
+T+L+ + + K+ D + +F+EM +GL + + TT+I +G + +EV +++
Sbjct: 320 YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMV 379
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK-------NLFCWNSMIDGLATHG 353
G ++ + L+ G + ++L++F +Q + N++ +N ++ GL +G
Sbjct: 380 SRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNG 439
Query: 354 YAKEALKMFSEMER-----------------------------------KGIRPNGVTFV 378
++AL +F +M + KG++PN VT+
Sbjct: 440 KLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYT 499
Query: 379 SVLTACTHAGFVEEGRSRFVSMIED 403
++++ G E F M ED
Sbjct: 500 TMISGLFREGLKHEAHVLFRKMKED 524
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 96/206 (46%), Gaps = 8/206 (3%)
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
+F + + LF MV P + T +++ A + + + +L + G D+Y +
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 313 SLIDMYAKCGS--IDRSLL-VFYKLQVK-NLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
L++ + + + S L KL + ++ + S+I+G +EA+ M ++M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIED 428
GI+P+ V + +++ + G V S F M E+Y I P + Y +V+ L G D
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 429 ALEMIRGMT---FEPNSFIWGALLSG 451
A ++RGMT +P+ + AL+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDA 256
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 184/436 (42%), Gaps = 56/436 (12%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ +N LL + ++ KM R G+ Y+++ L+ + +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE----RDAFAWTTMISAHVR 188
G + K G++ + ++L+ Y DA + D+M E D +TT+I
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 189 CGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMP---------- 234
+ A L D M +R N T+ +++G K G+I+ A L N+M
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 235 --------CK---------------------DVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
CK +VI++++L++C +R+ D L +M+
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
R + P+ V +I A G L ++++ ++ D++ SSLI+ + +D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 326 RSLLVFYKLQVKNLF----CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
+ +F + K+ F +N++I+G E +++F EM ++G+ N VT+ +++
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL---EMIRGMTF 438
A + + F M+ D + P I Y ++D L K G +E A+ E ++
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKM 501
Query: 439 EPNSFIWGALLSG-CK 453
EP + + ++ G CK
Sbjct: 502 EPTIYTYNIMIEGMCK 517
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 164/364 (45%), Gaps = 55/364 (15%)
Query: 60 INLATHAFSHMD----NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSS 115
I+LA + + M+ N ++Y+ ++ + AL + +M GV P ++SS
Sbjct: 241 IDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSS 300
Query: 116 LVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER- 174
L+ + W DA ++ +M ER
Sbjct: 301 LISC-----------LCNYERW------------------------SDASRLLSDMIERK 325
Query: 175 ---DAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAE 227
+ + +I A V+ G++ A +L+DEM +R + T++++I+G+ ++ A+
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 228 ILFNRMPCKD----VISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISAC 283
+F M KD V+++ TL+ + + KR + V LF EM RGL + V TT+I
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 284 AHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL---- 339
+ V ++ +G ++ ++L+D K G ++++++VF LQ +
Sbjct: 446 FQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 340 FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVS 399
+ +N MI+G+ G ++ +F + KG++P+ + + ++++ G EE + F
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 400 MIED 403
M ED
Sbjct: 566 MRED 569
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 166/356 (46%), Gaps = 25/356 (7%)
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLFDEMPE----RNSATWNAMIDGYAKSGNIECAE 227
P F + ++SA + + D L ++M N T+N +I+ + + I A
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 140
Query: 228 ILFNRM------PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVIS 281
L +M P +++ ++L+ Y KR D V L +MV G PD + TT+I
Sbjct: 141 ALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 198
Query: 282 ACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK---- 337
+ ++ G ++ +++ K G ID + + K++
Sbjct: 199 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 258
Query: 338 NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTA-CTHAGFVEEGRSR 396
N+ ++++ID L + + +AL +F+EME KG+RPN +T+ S+++ C + + + SR
Sbjct: 259 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDA--SR 316
Query: 397 FVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM---TFEPNSFIWGALLSGCK 453
+S + + I+P + + ++D K G + +A ++ M + +P+ F + +L++G
Sbjct: 317 LLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 376
Query: 454 LHRNLEIANVAVQNLMILEP--SNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGV 507
+H L+ A + LMI + N Y+ L+N + + R E ++ M G+
Sbjct: 377 MHDRLDEAKHMFE-LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/480 (20%), Positives = 200/480 (41%), Gaps = 64/480 (13%)
Query: 34 VYANMIKTNANQDSFLMNQFIAACT-------TINLATHAFSHMDNPNALVYNALLRTCV 86
++ M+K+ F N+ ++A I+L + N YN L+
Sbjct: 72 LFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINC-- 129
Query: 87 HCHRSH--QALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
C RS ALA KM++ G P+ + SSL+ + + + + G+
Sbjct: 130 FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPD 189
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFD 200
TTL+ + A +A + D M +R + + +++ + G++D A L +
Sbjct: 190 TITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN 249
Query: 201 EMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNK 252
+M E N ++ +ID K + + A LF M K +VI++++L++C +
Sbjct: 250 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYE 309
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
R+ D L +M+ R + P+ V +I A G L ++++ ++ D++ S
Sbjct: 310 RWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVKNLF----CWNSMIDGLATHGYAKEALKMFSEMERK 368
SLI+ + +D + +F + K+ F +N++I+G E +++F EM ++
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED---------------YC-------- 405
G+ N VT+ +++ A + + F M+ D C
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489
Query: 406 -----------ISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF---EPNSFIWGALLSG 451
+ P I Y M++ + K G +ED ++ ++ +P+ I+ ++SG
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 99/248 (39%), Gaps = 47/248 (18%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
NPN + +NAL+ V + +A Y +M++ + P +++SSL+ + K
Sbjct: 327 NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 386
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHV 187
+ + + +V TL+ + + ++F EM +R + +TT+I
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 188 RCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMP--------- 234
+ + D+A +F +M N T+N ++DG K+G +E A ++F +
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 506
Query: 235 ---------CK---------------------DVISWTTLMTCYSRNKRFGDVVTLFHEM 264
CK DVI + T+++ + R + LF +M
Sbjct: 507 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Query: 265 VSRGLAPD 272
G PD
Sbjct: 567 REDGPLPD 574
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 163/362 (45%), Gaps = 17/362 (4%)
Query: 87 HCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVF 146
C + A + K+++ G P + F++L+ L + + + + G +
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLI 194
Query: 147 VQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEM 202
TLV + G DA + D M E + + +++ + G+ A L +M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 203 PERN----SATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKRF 254
ERN + ++ +IDG K G+++ A LFN M K D+I++ TL+ + R+
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 255 GDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSL 314
D L +M+ R ++P+ V + +I + G L ++ +M G + +SL
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 315 IDMYAKCGSIDRSL----LVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGI 370
ID + K ++ ++ L+ K ++ +N +I+G + L++F EM +G+
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGV 434
Query: 371 RPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL 430
N VT+ +++ +G +E + F M+ + P I Y ++D L G +E AL
Sbjct: 435 IANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRR-VRPDIVSYKILLDGLCDNGELEKAL 493
Query: 431 EM 432
E+
Sbjct: 494 EI 495
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 163/358 (45%), Gaps = 25/358 (6%)
Query: 64 THAFSHMDN-------PNALVYNALLR-TCVHCHRSHQALACYVKMLRNGVVPTSYSFSS 115
++AFS M P+ +++N LL C+ C R +AL +M+ G PT + ++
Sbjct: 140 SYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC-RVSEALELVDRMVEMGHKPTLITLNT 198
Query: 116 LVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER- 174
LV L + + + + GF + ++ G A ++ +M ER
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 175 ---DAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGN-IECA 226
DA ++ +I + G +D+A LF+EM + + T+N +I G+ +G + A
Sbjct: 259 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGA 318
Query: 227 EIL---FNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISAC 283
++L R +V++++ L+ + + + + L EM+ RG+AP+ + ++I
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 284 AHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NL 339
L ++ ++ G D+ + LI+ Y K ID L +F ++ ++ N
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 340 FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRF 397
+N+++ G G + A K+F EM + +RP+ V++ +L G +E+ F
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 148/344 (43%), Gaps = 34/344 (9%)
Query: 177 FAWTTMISAHVRCGEVDSA----ARLFDEMPERNSATWNAMIDGYAKSGNIECAEILFNR 232
+ + MI+ RC ++ A ++ E ++ +N +++G + A L +R
Sbjct: 124 YTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDR 183
Query: 233 M------PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
M P +I+ TL+ N + D V L MV G P+EV V++
Sbjct: 184 MVEMGHKPT--LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCW 342
G L E+ + LD S +ID K GS+D + +F ++++K ++ +
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
N++I G G + K+ +M ++ I PN VTF ++ + G + E M++
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 403 DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF---EPNSFIWGALLSG-CKLHR-- 456
I+P Y ++D K +E+A++M+ M +P+ + L++G CK +R
Sbjct: 362 -RGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 457 -NLE----------IANVAVQNLMILEPSNSGYYSLLVNMYAEV 489
LE IAN N ++ SG + ++ E+
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/352 (21%), Positives = 154/352 (43%), Gaps = 24/352 (6%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYV--KMLRNGVVPTSYSFSSLVKACTLLMDSAAG 129
PN + Y +L V C ALA + KM + + +S ++ L D +
Sbjct: 225 QPNEVTYGPVLN--VMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG--LCKDGSLD 280
Query: 130 K--TVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMI 183
+ + +GF A + TL+ + G D K+ +M +R + ++ +I
Sbjct: 281 NAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLI 340
Query: 184 SAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCK--- 236
+ V+ G++ A +L EM +R N+ T+N++IDG+ K +E A + + M K
Sbjct: 341 DSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD 400
Query: 237 -DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEV 295
D++++ L+ Y + R D + LF EM RG+ + V T++ G L + K++
Sbjct: 401 PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKL 460
Query: 296 HHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLAT 351
++ D+ L+D G ++++L +F K++ ++ + +I G+
Sbjct: 461 FQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Query: 352 HGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
+A +F + KG++ + + +++ + + F M E+
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEE 572
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 169/374 (45%), Gaps = 23/374 (6%)
Query: 158 LGLAGDARKVFDEMPERDAFAWTT----MISAHVRCGEVDSAARLFDEM----PERNSAT 209
LG+ +A + F +M F T ++ + G+ D R F +M T
Sbjct: 205 LGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFT 264
Query: 210 WNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
+N MID K G++E A LF M + D +++ +++ + + R D V F EM
Sbjct: 265 YNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMK 324
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
PD + +I+ G L +G E + + NG +V S+L+D + K G +
Sbjct: 325 DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQ 384
Query: 326 RSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
+++ + ++ V N + + S+ID G +A ++ +EM + G+ N VT+ +++
Sbjct: 385 QAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALI 444
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEM---IRGMTF 438
A ++E F M + + P + Y ++ K ++ ALE+ ++G
Sbjct: 445 DGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503
Query: 439 EPNSFIWGALLSG-CKLHRNLEIANVAVQNLMILE-PSNSGYYSLLVNMYAEVNRWKEVS 496
+P+ ++G + G C L + +E A V + + +NS Y+ L++ Y + E
Sbjct: 504 KPDLLLYGTFIWGLCSLEK-IEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGL 562
Query: 497 KIRIAMKDLGVEKT 510
+ MK+L +E T
Sbjct: 563 HLLDEMKELDIEVT 576
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 163/376 (43%), Gaps = 38/376 (10%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
PN + Y+ L+ QA+ YV M R G+VP Y+++SL+ A + + + +
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAF----AWTTMISAHVR 188
+ + G + +V T L++ +A ++F +M ++ +I V+
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484
Query: 189 CGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMP-C---KDVIS 240
+D A L +E+ R + + I G IE A+++ N M C + +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYL- 299
+TTLM Y ++ + + L EM + TV++ C + L K V +
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIE------VTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 300 ----MVNGFGL--DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLF----CWNSMIDGL 349
+ N FGL + I +++ID K ++ + +F ++ K L + S++DG
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN 658
Query: 350 ATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMI-------E 402
G EAL + +M G++ + + + S++ +H +++ RS MI E
Sbjct: 659 FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Query: 403 DYCISPGIEHY--GCM 416
CIS +HY GC+
Sbjct: 719 VLCISVLKKHYELGCI 734
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 89/472 (18%), Positives = 199/472 (42%), Gaps = 28/472 (5%)
Query: 63 ATHAFSHMDN----PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVK 118
A FS M P N LL ++ + M+ G PT ++++ ++
Sbjct: 211 AIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMID 270
Query: 119 ACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMP----ER 174
D A + + + RG ++++ + +G D F+EM E
Sbjct: 271 CMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEP 330
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEILF 230
D + +I+ + G++ + EM + N +++ ++D + K G ++ A +
Sbjct: 331 DVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFY 390
Query: 231 NRMPCKDVI----SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
M ++ ++T+L+ + D L +EM+ G+ + V T +I
Sbjct: 391 VDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDA 450
Query: 287 GALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCW 342
+ +E+ + G ++ ++LI + K ++DR+L + +L+ + +L +
Sbjct: 451 ERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLY 510
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
+ I GL + + A + +EM+ GI+ N + + +++ A +G EG M E
Sbjct: 511 GTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKE 570
Query: 403 DYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT----FEPNSFIWGALLSGCKLHRNL 458
I + + ++D L K L+ A++ ++ + N+ I+ A++ G +
Sbjct: 571 -LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 459 EIANVAVQNLMI--LEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVE 508
E A + ++ L P + Y SL+ + + N + ++ +R M ++G++
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALA-LRDKMAEIGMK 680
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 116/283 (40%), Gaps = 17/283 (6%)
Query: 63 ATHAFSHMDN----PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVK 118
A F MD PN YNAL+ V +AL ++ G+ P + + +
Sbjct: 456 AEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIW 515
Query: 119 ACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD--- 175
L A K V + + G A+ + TTL++ Y G + + DEM E D
Sbjct: 516 GLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEV 575
Query: 176 -AFAWTTMISAHVRCGEVDSAARLFDEMP-----ERNSATWNAMIDGYAKSGNIECAEIL 229
+ +I + V A F+ + + N+A + AMIDG K +E A L
Sbjct: 576 TVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTL 635
Query: 230 FNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAH 285
F +M K D ++T+LM + + + L +M G+ D +A T+++ +H
Sbjct: 636 FEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSH 695
Query: 286 LGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSL 328
L + ++ G D + S++ + + G ID ++
Sbjct: 696 CNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAV 738
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 133/333 (39%), Gaps = 44/333 (13%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
N + Y AL+ R +A + KM GV+P S+++L+ + +
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE----RDAFAWTTMISAHVRC 189
+ RG + + T + L A+ V +EM E ++ +TT++ A+ +
Sbjct: 496 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 555
Query: 190 GEVDSAARLFDEMPERN----SATWNAMIDGYAKSGNIECAEILFNRMPCK-----DVIS 240
G L DEM E + T+ +IDG K+ + A FNR+ +
Sbjct: 556 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 615
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
+T ++ ++ + TLF +MV +GL PD A T+++ G
Sbjct: 616 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG------------- 662
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALK 360
+V +L D A+ G KL +L + S++ GL+ ++A
Sbjct: 663 ------NVLEALALRDKMAEIG---------MKL---DLLAYTSLVWGLSHCNQLQKARS 704
Query: 361 MFSEMERKGIRPNGVTFVSVLTACTHAGFVEEG 393
EM +GI P+ V +SVL G ++E
Sbjct: 705 FLEEMIGEGIHPDEVLCISVLKKHYELGCIDEA 737
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 183/430 (42%), Gaps = 62/430 (14%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMD------- 125
P+ +N L++ H+ A+ M G+VP +F+++++ D
Sbjct: 187 PDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRI 246
Query: 126 -------------SAAGKTVHGHVWK-RGFDAHVFVQ---------------TTLVEFYS 156
+ VHG + R DA F+Q TLV
Sbjct: 247 REQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLC 306
Query: 157 MLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSA 208
G A ++ D M + D + + ++IS + GEV A + D+M R N+
Sbjct: 307 KAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTV 366
Query: 209 TWNAMIDGYAKSGNIE----CAEILFNRMPCKDVISWTTLMT--CYSRNKRFGDVVTLFH 262
T+N +I K +E A +L ++ DV ++ +L+ C +RN R + LF
Sbjct: 367 TYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVA--MELFE 424
Query: 263 EMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG 322
EM S+G PDE +I + G L + + ++G V ++LID + K
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 323 SIDRSLLVFYKLQV----KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFV 378
+ +F +++V +N +N++IDGL ++A ++ +M +G +P+ T+
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 379 SVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIR---- 434
S+LT G +++ +M + C P I YG ++ L K G +E A +++R
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGC-EPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 435 -GMTFEPNSF 443
G+ P+++
Sbjct: 604 KGINLTPHAY 613
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 194/454 (42%), Gaps = 58/454 (12%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACT----------- 121
P+ YN +L V + + KM G+ P +F+ L+KA
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211
Query: 122 --------LLMDSAAGKTV-HGHVWKRGFDAHVFVQTTLVEF---------------YSM 157
L+ D TV G++ + D + ++ +VEF +
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271
Query: 158 LGLAGDARKVFDEMPERDAF-----AWTTMISAHVRCGEVDSAARLFDEMPER----NSA 208
G DA EM +D F + T+++ + G V A + D M + +
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331
Query: 209 TWNAMIDGYAKSGNIECAEILFNRMPCKD----VISWTTLMTCYSRNKRFGDVVTLFHEM 264
T+N++I G K G ++ A + ++M +D +++ TL++ + + + L +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391
Query: 265 VSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSI 324
S+G+ PD ++I + E+ + G D + + LID G +
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 325 DRSLLVFYKLQV----KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSV 380
D +L + ++++ +++ +N++IDG +EA ++F EME G+ N VT+ ++
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 381 LTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF-- 438
+ + VE+ MI + P Y ++ +GG I+ A ++++ MT
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIME-GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 439 -EPNSFIWGALLSG-CKLHRNLEIANVAVQNLMI 470
EP+ +G L+SG CK R +E+A+ ++++ +
Sbjct: 571 CEPDIVTYGTLISGLCKAGR-VEVASKLLRSIQM 603
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 147/386 (38%), Gaps = 52/386 (13%)
Query: 38 MIKTNANQDSFLMNQFIAACTTINLATHAFSHMD-------NPNALVYNALLRTCVHCHR 90
M++ + D + N I+ + A +D +PN + YN L+ T ++
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380
Query: 91 SHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTT 150
+A + G++P +F+SL++ L + + + +G + F
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 151 LVEFYSMLGLAGDARKVFDEMP----ERDAFAWTTMISAHVRCGEVDSAARLFDEMP--- 203
L++ G +A + +M R + T+I + + A +FDEM
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 204 -ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKRFGDVV 258
RNS T+N +IDG KS +E A L ++M + D ++ +L+T + R
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 259 TLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMY 318
+ M S G PD V T+IS G + + ++ + + G L +
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH--------- 611
Query: 319 AKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEM-ERKGIRPNGVTF 377
+N +I GL EA+ +F EM E+ P+ V++
Sbjct: 612 ----------------------AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
Query: 378 VSVLTA-CTHAGFVEEGRSRFVSMIE 402
V C G + E V ++E
Sbjct: 650 RIVFRGLCNGGGPIREAVDFLVELLE 675
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/422 (18%), Positives = 160/422 (37%), Gaps = 56/422 (13%)
Query: 37 NMIKTNANQDSFLMNQFIAACTTINL-----ATHAFSHMD-------NPNALVYNALLRT 84
N I+ +NQD F +Q+ L HA MD +P+ YN+++
Sbjct: 280 NFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISG 339
Query: 85 CVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
+A+ +M+ P + ++++L+ + + +G
Sbjct: 340 LCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMP----ERDAFAWTTMISAHVRCGEVDSAARLFD 200
V +L++ + A ++F+EM E D F + +I + G++D A +
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 201 EMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPC----KDVISWTTLMTCYSRNK 252
+M R+ T+N +IDG+ K+ AE +F+ M ++ +++ TL+ +++
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
R D L +M+ G PD+ ++++ G + ++ + NG D+
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI---- 575
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRP 372
+ ++I GL G + A K+ ++ KGI
Sbjct: 576 ---------------------------VTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 373 NGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMV-DLLSKGGLIEDALE 431
+ V+ E + F M+E P Y + L + GG I +A++
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVD 668
Query: 432 MI 433
+
Sbjct: 669 FL 670
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 182/400 (45%), Gaps = 21/400 (5%)
Query: 70 MDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAG 129
+D P A +Y+ ++ + L + ++ G PT ++ L+ T + +
Sbjct: 445 IDAPIA-IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKA 503
Query: 130 KTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISA 185
V + + G ++ + ++ + L +A VF++M + D + +ISA
Sbjct: 504 LEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISA 563
Query: 186 HVRCGEVDSAARLFDEMPE----RNSATWNAMIDGYAKSGNIECAEILFNRMP----CKD 237
G +D A + EM + + T+ +I GYAKSG++ + +F+ M
Sbjct: 564 FCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPT 623
Query: 238 VISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHH 297
V ++ L+ ++ V + EM G++ +E T ++ A +G G E
Sbjct: 624 VHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFT 683
Query: 298 YLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCWNSMIDGLATHG 353
L G +D++ +L+ K G + +L V ++ +N+ F +N +IDG A G
Sbjct: 684 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 743
Query: 354 YAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHY 413
EA + +M+++G++P+ T+ S ++AC+ AG + ++ + +E + P I+ Y
Sbjct: 744 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA-TQTIEEMEALGVKPNIKTY 802
Query: 414 GCMVDLLSKGGLIEDAL---EMIRGMTFEPNSFIWGALLS 450
++ ++ L E AL E ++ M +P+ ++ LL+
Sbjct: 803 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/448 (20%), Positives = 180/448 (40%), Gaps = 71/448 (15%)
Query: 66 AFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMD 125
AF + P+ + +++ H+A + +M G+ PTS ++SL+ A + D
Sbjct: 300 AFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRD 359
Query: 126 SAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE----RDAFAWTT 181
+ + + G + + + +V +S G A A FDE +A +
Sbjct: 360 MDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGK 419
Query: 182 MISAHVRCGEVDSAARLFDEMPERN----SATWNAMIDGYAKSGNIECAEILFNRMP--- 234
+I AH + ++ A L EM E A ++ M+DGY + + ++F R+
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 235 -CKDVISWTTLMTCYSRN-----------------------------------KRFGDVV 258
V+++ L+ Y++ K + +
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 259 TLFHEMVSRGLAPDEVAMTTVISACAHLGALGLG-------KEVHHYLMVNGFGLDVYIG 311
+F +MV G+ PD + +ISA +G + +++ H F
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF------- 592
Query: 312 SSLIDMYAKCGSIDRSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKEALKMFSEMER 367
+I YAK G + RSL VF ++ V + +N +I+GL ++A+++ EM
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 368 KGIRPNGVTFVSVLTACTHAGFVEEGRS-RFVSMIEDYCISPGIEHYGCMVDLLSKGGLI 426
G+ N T+ ++ G + G++ + + +++ + I Y ++ K G +
Sbjct: 653 AGVSANEHTYTKIMQGYASVG--DTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRM 710
Query: 427 EDALEMIRGMT---FEPNSFIWGALLSG 451
+ AL + + M+ NSF++ L+ G
Sbjct: 711 QSALAVTKEMSARNIPRNSFVYNILIDG 738
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 150/314 (47%), Gaps = 17/314 (5%)
Query: 139 RGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDS 194
+G +V ++L+ G DA ++ +M E+ + + +I A V+ G+
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 195 AARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVI----SWTTLMT 246
A +L D+M +R + T+N++I+G+ ++ A+ +F M KD ++ TL+
Sbjct: 274 AEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIK 333
Query: 247 CYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGL 306
+ ++KR D LF EM RGL D V TT+I H G ++V ++ +G
Sbjct: 334 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 393
Query: 307 DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALKMF 362
D+ S L+D G ++++L VF +Q +++ + +MI+G+ G + +F
Sbjct: 394 DIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLF 453
Query: 363 SEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSK 422
+ KG++PN VT+ ++++ ++E + M ED + P Y ++ +
Sbjct: 454 CSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL-PDSGTYNTLIRAHLR 512
Query: 423 GGLIEDALEMIRGM 436
G + E+IR M
Sbjct: 513 DGDKAASAELIREM 526
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 198/492 (40%), Gaps = 76/492 (15%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ +N LL + ++ KM R G+ Y+++ L+ + +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE----RDAFAWTTMISAHVR 188
G + K G++ + ++L+ Y DA + D+M E D +TT+I
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 189 CGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMP---------- 234
+ A L D M +R N T+ +++G K G+I+ A L N+M
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187
Query: 235 --------CK---------------------DVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
CK +V+++++L++C R+ D L +M+
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
+ + P+ V +I A G +++H ++ D++ +SLI+ + +D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307
Query: 326 RSLLVFYKLQVKNLF----CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
++ +F + K+ F +N++I G ++ ++F EM +G+ + VT+ +++
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---F 438
H G + + F M+ D + P I Y ++D L G +E ALE+ M
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 439 EPNSFIWGALLSG--------------CKLHRNLEIANVAVQNLMILEPSNSGYYS--LL 482
+ + +I+ ++ G C L NV N MI SG S LL
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMI-----SGLCSKRLL 481
Query: 483 VNMYAEVNRWKE 494
YA + + KE
Sbjct: 482 QEAYALLKKMKE 493
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 139/307 (45%), Gaps = 20/307 (6%)
Query: 172 PERDAFAWTTMISAHVRCGEVDSAARLFDEMPE----RNSATWNAMIDGYAKSGNIECAE 227
P F + ++SA + + D L ++M N T+N +I+ + + I A
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 228 ILFNRM------PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVIS 281
L +M P +++ ++L+ Y KR D V L +MV G PD + TT+I
Sbjct: 66 ALLGKMMKLGYEP--SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 282 ACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK---- 337
+ ++ G ++ +++ K G ID + + K++
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA 183
Query: 338 NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRF 397
++ +N++ID L + + +AL +F EME KGIRPN VT+ S+++ G +
Sbjct: 184 DVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLL 243
Query: 398 VSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM---TFEPNSFIWGALLSGCKL 454
MIE I+P + + ++D K G +A ++ M + +P+ F + +L++G +
Sbjct: 244 SDMIEKK-INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 455 HRNLEIA 461
H L+ A
Sbjct: 303 HDRLDKA 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 100/223 (44%), Gaps = 12/223 (5%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
NPN + +NAL+ V + +A + M++ + P ++++SL+ + K
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHV 187
+ + + + TL++ + D ++F EM R D +TT+I
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 188 RCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVI 239
G+ D+A ++F +M + T++ ++DG +G +E A +F+ M D+
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 240 SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA 282
+TT++ + + D LF + +G+ P+ V T+IS
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 108/209 (51%), Gaps = 2/209 (0%)
Query: 250 RNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVY 309
R + V + + G D + + C AL K VH ++ + D+
Sbjct: 158 REGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVGISDIS 217
Query: 310 IGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAKEALKMFSEMERKG 369
+S+I+MY+ CGS++ +L VF + +NL W +I A +G ++A+ FS +++G
Sbjct: 218 AYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEG 277
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDA 429
+P+G F + AC G + EG F SM ++Y I P +EHY +V +L++ G +++A
Sbjct: 278 NKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEA 337
Query: 430 LEMIRGMTFEPNSFIWGALLSGCKLHRNL 458
L + M EPN +W L++ ++H +L
Sbjct: 338 LRFVESM--EPNVDLWETLMNLSRVHGDL 364
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 8/150 (5%)
Query: 208 ATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSR 267
+ +N++I+ Y+ G++E A +FN MP +++ +W ++ C+++N + D + F
Sbjct: 217 SAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQE 276
Query: 268 GLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFG----LDVYIGSSLIDMYAKCGS 323
G PD + AC LG + G +H M +G ++ Y+ SL+ M A+ G
Sbjct: 277 GNKPDGEMFKEIFFACGVLGDMNEGL-LHFESMYKEYGIIPCMEHYV--SLVKMLAEPGY 333
Query: 324 IDRSLLVFYKLQVKNLFCWNSMIDGLATHG 353
+D +L F + N+ W ++++ HG
Sbjct: 334 LDEALR-FVESMEPNVDLWETLMNLSRVHG 362
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 170/370 (45%), Gaps = 26/370 (7%)
Query: 73 PNALVYNALLRTCVHCHRSHQALA--CYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGK 130
PN + YN ++ HC + LA + +ML G+ P ++++S L+ D
Sbjct: 482 PNVVFYNNMM--LAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAW 539
Query: 131 TVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA-----WTTMISA 185
V + F+A+ + T++ +G A+++ + + ++ + ++I
Sbjct: 540 DVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDG 599
Query: 186 HVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCK----D 237
V+ G+ DSA + EM E N T+ ++I+G+ KS ++ A + + M D
Sbjct: 600 FVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLD 659
Query: 238 VISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHH 297
+ ++ L+ + + TLF E+ GL P+ ++IS +LG + +++
Sbjct: 660 LPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYK 719
Query: 298 YLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ----VKNLFCWNSMIDGLATHG 353
++ +G D++ +++ID K G+I+ + ++ +L V + +++GL+ G
Sbjct: 720 KMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKG 779
Query: 354 YAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHY 413
+A KM EM++K + PN + + +V+ AG EG + D + GI H
Sbjct: 780 QFLKASKMLEEMKKKDVTPNVLLYSTVI-----AGHHREGNLNEAFRLHDEMLEKGIVHD 834
Query: 414 GCMVDLLSKG 423
+ +LL G
Sbjct: 835 DTVFNLLVSG 844
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 99/419 (23%), Positives = 181/419 (43%), Gaps = 36/419 (8%)
Query: 78 YNALLRTCVHCHRSHQALACYVKMLRNGVVP----TSYSFSSLVKACTLLMDSAA---GK 130
+N LL + R A+ C+ M+ VVP + SSLV++ L+D A K
Sbjct: 172 FNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSN--LIDEAKEIYNK 229
Query: 131 TVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCG 190
V V + ++ +L E + R+V E D ++ + A +
Sbjct: 230 MVLIGVAGDNVTTQLLMRASLRERKPEEAVKI-FRRVMSRGAEPDGLLFSLAVQAACKTP 288
Query: 191 EVDSAARLFDEMPER-----NSATWNAMIDGYAKSGNIECAEILFNRM-----PCKDVIS 240
++ A L EM + + T+ ++I + K GN+E A + + M P VI+
Sbjct: 289 DLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMS-VIA 347
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVIS-ACAHLGALGLGKEVHHYL 299
T+L+ Y + G + LF+ M GLAPD+V + ++ C + + + K + Y+
Sbjct: 348 ATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKN---MEMEKAIEFYM 404
Query: 300 MVNGFGL--DVYIGSSLIDMYAKCGSIDRSLLVF---YKLQVKNLFCWNSMIDGLATHGY 354
+ + + ++I K S + +L +F ++ + + F N + G
Sbjct: 405 RMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGK 464
Query: 355 AKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYG 414
A ME+KGI PN V + +++ A ++ RS F M+E + P Y
Sbjct: 465 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK-GLEPNNFTYS 523
Query: 415 CMVDLLSKGGLIEDALEMIRGM---TFEPNSFIWGALLSG-CKLHRNLEIANVAVQNLM 469
++D K ++A ++I M FE N I+ +++G CK+ + + A +QNL+
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSK-AKEMLQNLI 581
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 106/507 (20%), Positives = 201/507 (39%), Gaps = 94/507 (18%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P A Y +L+ Q V+M + +V + Y++ ++VK D +
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVR 188
+ G +V + TTL++ + GDA +V EM E+ D F + ++I +
Sbjct: 440 VKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSK 499
Query: 189 CGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAE----------ILFNRMP 234
+D A EM E N+ T+ A I GY ++ A+ +L N++
Sbjct: 500 AKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVL 559
Query: 235 CKDVI-----------------------------SWTTLMTCYSRNKRFGDVVTLFHEMV 265
C +I ++T LM +N + D +F EM
Sbjct: 560 CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMR 619
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
+G+APD + +I+ + LG + + ++ G +V I + L+ + + G I+
Sbjct: 620 GKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIE 679
Query: 326 RSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
++ + ++ VK N + ++IDG G EA ++F EM+ KG+ P+ + +++
Sbjct: 680 KAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLV 739
Query: 382 TACTHAGFVEE-----------------------------GRSRFVSMIEDYCISPGIEH 412
C VE G++ + + + + +
Sbjct: 740 DGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 413 YG--------CMVDLLSKGGLIEDALEMIRGM---TFEPNSFIWGALLSGC-KLHRNLEI 460
+G M+D L K G +E A E+ M P + +LL+G K+ R E+
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859
Query: 461 ANVAVQNLMI-LEPSNSGYYSLLVNMY 486
V + + +EP + YS+++N +
Sbjct: 860 FPVFDEAIAAGIEPDHI-MYSVIINAF 885
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 93/437 (21%), Positives = 176/437 (40%), Gaps = 96/437 (21%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ YN+L+ R +A + V+M+ NG+ P ++++ + + + A+
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKY 544
Query: 133 HGHVWKRGFDAHVFVQTTLVEFY--------------SML--GLAGDAR----------- 165
+ + G + + T L+ Y SM+ G+ GDA+
Sbjct: 545 VKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFK 604
Query: 166 --------KVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSAT 209
++F EM + D F++ +I+ + G + A+ +FDEM E N
Sbjct: 605 NDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVII 664
Query: 210 WNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
+N ++ G+ +SG IE A+ L + M K + +++ T++ Y ++ + LF EM
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 266 SRGLAPDEVAMTTVISACAHL----------------------------------GALGL 291
+GL PD TT++ C L G L
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 292 GKEVHHYLMVNGFGL-----DVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL----FCW 342
EV + LM F DV + +ID K G+++ + +F+++Q NL +
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTY-NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITY 843
Query: 343 NSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIE 402
S+++G G E +F E GI P+ + + ++ A F++EG + ++
Sbjct: 844 TSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINA-----FLKEGMTTKALVLV 898
Query: 403 DYCISPGIEHYGCMVDL 419
D + GC + +
Sbjct: 899 DQMFAKNAVDDGCKLSI 915
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/429 (21%), Positives = 175/429 (40%), Gaps = 80/429 (18%)
Query: 92 HQALACYVKML-RNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHV---FV 147
+AL+ +M+ RN P + +SS+V+ C+ GK+ G ++ FD ++ ++
Sbjct: 114 EKALSVVERMIERNW--PVAEVWSSIVR-CS---QEFVGKSDDGVLFGILFDGYIAKGYI 167
Query: 148 QTTLVEFYSMLGLAGDAR---------------------KVFDEMPER----DAFAWTTM 182
+ + F S +GL R V+ M ER D + +
Sbjct: 168 EEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHML 227
Query: 183 ISAHVRCGEV---------------------DSAARLFDEMPERN----SATWNAMIDGY 217
I AH R G V D A +L + M + T++ +IDG
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGL 287
Query: 218 AKSGNIECAEILFNRMPCKDVI----SWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDE 273
K +E A+ L M V +++ L+ + + L HEMVS G+
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347
Query: 274 VAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYK 333
I + G + K + ++ +G +SLI+ Y + ++ + + +
Sbjct: 348 YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVE 407
Query: 334 LQVKNL----FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGF 389
++ +N+ + + +++ G+ + G A + EM G RPN V + +++ F
Sbjct: 408 MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT-----F 462
Query: 390 VEEGR----SRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNS 442
++ R R + +++ I+P I Y ++ LSK +++A + M +PN+
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNA 522
Query: 443 FIWGALLSG 451
F +GA +SG
Sbjct: 523 FTYGAFISG 531
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/427 (21%), Positives = 183/427 (42%), Gaps = 67/427 (15%)
Query: 33 SVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDN-------PNALVYNALLRTC 85
S+ M+K D + + N + A S +D P+ + YNA++ +
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 86 VHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHV 145
R + A + ++ R G+ P ++++LV + W
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG-----------LCNSSRW-------- 241
Query: 146 FVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDE 201
DA ++ +M ++ + ++ ++ A V+ G+V A LF+E
Sbjct: 242 ----------------SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 202 MP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKR 253
M + + T++++I+G I+ A +F+ M K DV+S+ TL+ + + KR
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 254 FGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSS 313
D + LF EM RGL + V T+I G + +E + G D++ +
Sbjct: 346 VEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNI 405
Query: 314 LIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALKMFSEMERKG 369
L+ G ++++L++F +Q + ++ + ++I G+ G +EA +F + KG
Sbjct: 406 LLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Query: 370 IRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDA 429
++P+ VT+ ++++ G + E + + M ++ G+ C LS G + A
Sbjct: 466 LKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE-----GLMKNDCT---LSDGDITLSA 517
Query: 430 LEMIRGM 436
E+I+ M
Sbjct: 518 -ELIKKM 523
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/415 (21%), Positives = 179/415 (43%), Gaps = 24/415 (5%)
Query: 60 INLATHAFSHMDN----PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSS 115
+N A FS M P+ + +N LL V + ++ KM G+ Y+F+
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 116 LVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE-- 173
++ + ++ G + K G++ +LV + DA + D+M E
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 174 --RDAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAE 227
D A+ +I + + V+ A F E+ + N T+ A+++G S A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 228 ILFNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISAC 283
L + M K +VI+++ L+ + +N + + LF EMV + PD V +++I+
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 284 AHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ----VKNL 339
+ ++ ++ G DV ++LI+ + K ++ + +F ++ V N
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNT 365
Query: 340 FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVS 399
+N++I G G +A + FS+M+ GI P+ T+ +L G +E+ F
Sbjct: 366 VTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFED 425
Query: 400 MIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSG 451
M + + I Y ++ + K G +E+A + ++ +P+ + ++SG
Sbjct: 426 M-QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSG 479
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 135/287 (47%), Gaps = 19/287 (6%)
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK 293
P ++ + L++ + K++ V++L +M G+ D VI+ + L
Sbjct: 81 PFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 294 EVHHYLMVNGFGLDVYIGSSLIDMYAK-------CGSIDRSLLVFYKLQVKNLFCWNSMI 346
+ ++ G+ D SL++ + + +D+ + + YK ++ +N++I
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK---PDIVAYNAII 197
Query: 347 DGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCI 406
D L +A F E+ERKGIRPN VT+ +++ ++ + MI+ I
Sbjct: 198 DSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK-I 256
Query: 407 SPGIEHYGCMVDLLSKGGLIEDAL----EMIRGMTFEPNSFIWGALLSGCKLHRNLEIAN 462
+P + Y ++D K G + +A EM+R M+ +P+ + +L++G LH ++ AN
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVR-MSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 463 VAVQNLMILEP--SNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGV 507
+ +LM+ + ++ Y+ L+N + + R ++ K+ M G+
Sbjct: 316 -QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 137/311 (44%), Gaps = 20/311 (6%)
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEILF 230
D + + +I+ C +V A + +M E + T ++++G+ + + A L
Sbjct: 119 DLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLV 178
Query: 231 NRM------PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACA 284
++M P D++++ ++ + KR D F E+ +G+ P+ V T +++
Sbjct: 179 DKMVEIGYKP--DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 285 HLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQV----KNLF 340
+ + ++ +V S+L+D + K G + + +F ++ ++
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 341 CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSM 400
++S+I+GL H EA +MF M KG + V++ +++ A VE+G F M
Sbjct: 297 TYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM 356
Query: 401 IEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF---EPNSFIWGALLSGCKLHRN 457
+ +S + Y ++ + G ++ A E M F P+ + + LL G +
Sbjct: 357 SQRGLVSNTV-TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415
Query: 458 LEIANVAVQNL 468
LE A V +++
Sbjct: 416 LEKALVIFEDM 426
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 117/263 (44%), Gaps = 24/263 (9%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHM----DNPNALVYNALLR-TCV 86
+ + N+I +A D+F+ N + A F M +P+ + Y++L+ C+
Sbjct: 254 KKITPNVITYSALLDAFVKNGKVLE------AKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 87 HCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVF 146
H R +A + M+ G + S+++L+ G + + +RG ++
Sbjct: 308 H-DRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 147 VQTTLVEFYSMLGLAGDARKVFDEMP----ERDAFAWTTMISAHVRCGEVDSAARLFDEM 202
TL++ + G A++ F +M D + + ++ GE++ A +F++M
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 203 PER----NSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKRF 254
+R + T+ +I G K+G +E A LF + K D++++TT+M+
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 255 GDVVTLFHEMVSRGLAPDEVAMT 277
+V L+ +M GL ++ ++
Sbjct: 487 HEVEALYTKMKQEGLMKNDCTLS 509
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 164/347 (47%), Gaps = 16/347 (4%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ + + +LL H +R A+A + ++L G P ++++L++ +
Sbjct: 151 PDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVEL 210
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVR 188
+ G +V LV +G GDA + +M +R + +T +I A V+
Sbjct: 211 FNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVK 270
Query: 189 CGEVDSAARLFDEMPE----RNSATWNAMIDGYAKSGNIECAEILF---NRMPC-KDVIS 240
G++ A L++ M + + T+ ++I+G G ++ A +F R C + +
Sbjct: 271 VGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVI 330
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
+TTL+ + ++KR D + +F+EM +G+ + + T +I +G + +EV + +
Sbjct: 331 YTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMS 390
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAK 356
D+ + L+D G ++++L++F ++ + N+ + +I G+ G +
Sbjct: 391 SRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVE 450
Query: 357 EALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
+A +F + KG++PN +T+ ++++ G + E S F M ED
Sbjct: 451 DAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 138/300 (46%), Gaps = 17/300 (5%)
Query: 173 ERDAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEI 228
E D +T++++ + ++ A LFD++ + N T+ +I K+ ++ A
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209
Query: 229 LFNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACA 284
LFN+M +V+++ L+T R+GD L +M+ R + P+ + T +I A
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 285 HLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ----VKNLF 340
+G L KE+++ ++ DV+ SLI+ G +D + +FY ++ N
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329
Query: 341 CWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSM 400
+ ++I G ++ +K+F EM +KG+ N +T+ ++ G + + F M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389
Query: 401 IEDYCISPGIEHYGCMVDLLSKGGLIEDAL---EMIRGMTFEPNSFIWGALLSG-CKLHR 456
P I Y ++D L G +E AL E +R + N + ++ G CKL +
Sbjct: 390 SSRRA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 114/246 (46%), Gaps = 16/246 (6%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTL--LMDSAAGK 130
PN + + AL+ V + +A Y M++ V P +++ SL+ + L+D A +
Sbjct: 256 PNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA--R 313
Query: 131 TVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFA----WTTMISAH 186
+ + + G + + TTL+ + D K+F EM ++ A +T +I +
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373
Query: 187 VRCGEVDSAARLFDEMPERNSA----TWNAMIDGYAKSGNIECAEILFNRMPCKD----V 238
G D A +F++M R + T+N ++DG +G +E A ++F M ++ +
Sbjct: 374 CLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433
Query: 239 ISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHY 298
+++T ++ + + D LF + S+G+ P+ + TT+IS G + +
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Query: 299 LMVNGF 304
+ +GF
Sbjct: 494 MKEDGF 499
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ Y +L+ +A + M RNG P +++L+ G +
Sbjct: 291 PDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVR 188
+ ++G A+ T L++ Y ++G A++VF++M R D + ++
Sbjct: 351 FYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC 410
Query: 189 CGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVIS 240
G+V+ A +F+ M +R N T+ +I G K G +E A LF + K +VI+
Sbjct: 411 NGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVIT 470
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDE 273
+TT+++ + R + +LF +M G P+E
Sbjct: 471 YTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 174/400 (43%), Gaps = 16/400 (4%)
Query: 49 LMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVP 108
L + + A +N H+D + Y ++ + AL KM + P
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHID---VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 294
Query: 109 TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF 168
+S+++ + + + + ++G +VF +++ + G DA+++
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 169 DEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKS 220
+M ER D + +ISA V+ G++ A +L DEM R ++ T+N+MI G+ K
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 221 GNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVI 280
+ A+ +F+ M DV+++ T++ Y R KR + + L E+ RGL + T+I
Sbjct: 415 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 281 SACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL- 339
+ L +++ ++ +G D + L+ + + ++ +L +F +Q+ +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 340 ---FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSR 396
+N +I G+ EA +F + G+ P+ T+ +++ + +
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 397 FVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
F M +D P Y ++ K G I+ ++E+I M
Sbjct: 595 FHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 194/476 (40%), Gaps = 68/476 (14%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
N +N L++ CH+ +L+ + K+ + G P +F++L+ L + +
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 134 GHVWKRGFDAHVFVQTTLVE---------FYSML------GLAGDARKVFDEMPER---- 174
G++ + GF V + +VE F +++ G +A + ++M +
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILF 230
D + T+++ + G+ SA L +M E + ++A+ID K G+ A+ LF
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 231 NRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
+ M K +V ++ ++ + R+ D L +M+ R + PD + +ISA
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 287 GAL----GLGKEVHHYL----------MVNGF-----------------GLDVYIGSSLI 315
G L L E+ H M+ GF DV +++I
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Query: 316 DMYAKCGSIDRSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
D+Y + +D + + ++ V N +N++I G A +F EM G+
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALE 431
P+ +T +L +EE F +I+ I Y ++ + KG +++A +
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 432 MIRGMTF---EPNSFIWGALLSGCKLHRNLEIANVAVQNLMI--LEPSNSGYYSLL 482
+ + EP+ + ++SG + ANV + EP NS Y +L+
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 165/406 (40%), Gaps = 36/406 (8%)
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWK 138
N ++ V +R A++ Y KM + YSF+ L+K + + G + K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 139 RGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARL 198
GF V TL+ + +A +F M V G +++ A L
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYM---------------VETGFLEAVA-L 213
Query: 199 FDEMPERNSA----TWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSR 250
FD+M E T+N +I+G G + A L N+M K DV+++ T++ +
Sbjct: 214 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 273
Query: 251 NKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI 310
+ L +M + PD V + +I G + + ++ G +V+
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 311 GSSLIDMYAKCG---SIDRSLLVFYKLQVK-NLFCWNSMIDGLATHGYAKEALKMFSEME 366
+ +ID + G R L + ++ ++ +N++I G EA K+ EM
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 367 RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLI 426
+ I P+ VT+ S++ GF + R + D SP + + ++D+ + +
Sbjct: 394 HRCIFPDTVTYNSMI-----YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 427 EDALEMIRGMT---FEPNSFIWGALLSGCKLHRNLEIANVAVQNLM 469
++ ++++R ++ N+ + L+ G NL A Q ++
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 138/330 (41%), Gaps = 38/330 (11%)
Query: 163 DARKVFDEM----PERDAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMI 214
DA FD M P A +I VR D A L+ +M R N ++N +I
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 215 DGYAKSGNIECAEILFNRMP----CKDVISWTTLMTCYSRNKR---------------FG 255
+ + + F ++ DV+++ TL+ R F
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 256 DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLI 315
+ V LF +MV GL P + T+I+ G + + + ++ G +DV +++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 316 DMYAKCGSIDRSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
+ K G +L + K++ ++ ++++ID L G+ +A +FSEM KGI
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDAL- 430
PN T+ ++ G + + MIE I+P + + ++ K G + +A
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIERE-INPDVLTFNALISASVKEGKLFEAEK 387
Query: 431 ---EMIRGMTFEPNSFIWGALLSG-CKLHR 456
EM+ F P++ + +++ G CK +R
Sbjct: 388 LCDEMLHRCIF-PDTVTYNSMIYGFCKHNR 416
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/297 (19%), Positives = 112/297 (37%), Gaps = 23/297 (7%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDN-------PNALVYNALLRT 84
+ + +MI+ N D N I+A A D P+ + YN+++
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 85 CVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
+R A + M VV +F++++ G + + +RG A+
Sbjct: 411 FCKHNRFDDAKHMFDLMASPDVV----TFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFD 200
TL+ + + A+ +F EM D ++ +++ A LF+
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 201 EMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPC----KDVISWTTLMTCYSRNK 252
+ + ++ +N +I G K ++ A LF +P DV ++ +++ +
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVY 309
D LFH+M G PD T+I C G + E+ + NGF D +
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/489 (21%), Positives = 207/489 (42%), Gaps = 37/489 (7%)
Query: 49 LMNQFIAACTTINLATHAFSHMDN----PNALVYNALLRTCVHCHRSHQALACYVKMLRN 104
++N F T N T M + P+A YN L+ C +A + +M
Sbjct: 249 ILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA 308
Query: 105 GVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDA 164
G ++++L+ V + GF + +L+ Y+ G+ +A
Sbjct: 309 GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEA 368
Query: 165 RKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMIDG 216
++ ++M E+ D F +TT++S R G+V+SA +F+EM + N T+NA I
Sbjct: 369 MELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKM 428
Query: 217 YAKSGNIECAEILFNRMPC----KDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPD 272
Y G +F+ + D+++W TL+ + +N +V +F EM G P+
Sbjct: 429 YGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPE 488
Query: 273 EVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFY 332
T+ISA + G+ V+ ++ G D+ ++++ A+ G ++S V
Sbjct: 489 RETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLA 548
Query: 333 KLQ----VKNLFCWNSMIDGLATHGYA--KEALKMFS---EMERKGIRPNGVTFVSVLTA 383
+++ N + S++ H YA KE M S E+ I P V +++
Sbjct: 549 EMEDGRCKPNELTYCSLL-----HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 384 CTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDA---LEMIRGMTFEP 440
C+ + E F S +++ SP I MV + + ++ A L+ ++ F P
Sbjct: 604 CSKCDLLPEAERAF-SELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTP 662
Query: 441 NSFIWGALLSGCKLHRNLEIANVAVQNLMI--LEPSNSGYYSLLVNMYAEVNRWKEVSKI 498
+ + +L+ + + ++ ++ ++P Y+ ++ Y R ++ S+I
Sbjct: 663 SMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIIS-YNTVIYAYCRNTRMRDASRI 721
Query: 499 RIAMKDLGV 507
M++ G+
Sbjct: 722 FSEMRNSGI 730
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 201/462 (43%), Gaps = 67/462 (14%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKA------------ 119
+P+ + YN+L+ +A+ +M G P +++++L+
Sbjct: 346 SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 120 --------------CT----LLMDSAAGK-----TVHGHVWKRGFDAHVFVQTTLVEFYS 156
CT + M GK + + G + TL+ +
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 157 MLGLAGDARKVFDEM------PERDAFAWTTMISAHVRCGEVDSA----ARLFDEMPERN 206
G+ + VF EM PER+ F T+ISA+ RCG + A R+ D +
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETF--NTLISAYSRCGSFEQAMTVYRRMLDAGVTPD 523
Query: 207 SATWNAMIDGYAKSGNIECAEILFNRMP---CK-DVISWTTLMTCYSRNKRFGDVVTLFH 262
+T+N ++ A+ G E +E + M CK + +++ +L+ Y+ K G + +L
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAE 583
Query: 263 EMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCG 322
E+ S + P V + T++ C+ L + L GF D+ +S++ +Y +
Sbjct: 584 EVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 323 SIDRS--LLVFYKLQ--VKNLFCWNSMI---DGLATHGYAKEALKMFSEMERKGIRPNGV 375
+ ++ +L + K + ++ +NS++ A G ++E L+ E+ KGI+P+ +
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILR---EILAKGIKPDII 700
Query: 376 TFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRG 435
++ +V+ A + + SR S + + I P + Y + + + E+A+ ++R
Sbjct: 701 SYNTVIYAYCRNTRMRDA-SRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 436 MTF---EPNSFIWGALLSG-CKLHRNLEIANVAVQNLMILEP 473
M PN + +++ G CKL+R E A + V++L L+P
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCKLNRKDE-AKLFVEDLRNLDP 800
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 154/387 (39%), Gaps = 94/387 (24%)
Query: 156 SMLGLAG---DARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMPE---- 204
SMLG G A +F+ + E D +++T++ISA G A +F +M E
Sbjct: 181 SMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCK 240
Query: 205 --------------RNSATWNAMI-------------DGYAKSGNIEC---------AEI 228
+ WN + D Y + I C A
Sbjct: 241 PTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQ 300
Query: 229 LFNRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACA 284
+F M D +++ L+ Y ++ R + + + +EMV G +P V ++ISA A
Sbjct: 301 VFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYA 360
Query: 285 HLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ--------- 335
G L E+ + + G DV+ ++L+ + + G ++ ++ +F +++
Sbjct: 361 RDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNIC 420
Query: 336 ------------------------------VKNLFCWNSMIDGLATHGYAKEALKMFSEM 365
++ WN+++ +G E +F EM
Sbjct: 421 TFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM 480
Query: 366 ERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGL 425
+R G P TF ++++A + G E+ + + M+ D ++P + Y ++ L++GG+
Sbjct: 481 KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML-DAGVTPDLSTYNTVLAALARGGM 539
Query: 426 IEDALEMIRGMTF---EPNSFIWGALL 449
E + +++ M +PN + +LL
Sbjct: 540 WEQSEKVLAEMEDGRCKPNELTYCSLL 566
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 134/304 (44%), Gaps = 46/304 (15%)
Query: 164 ARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEM----PERNSATWNAMID 215
A K+ D++P + D A+TT++ A+ R G+ + A LF+ M P T+N ++D
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 216 GYAKSGNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVA 275
+ K G SW ++ + EM S+GL DE
Sbjct: 254 VFGKMGR-----------------SWR-------------KILGVLDEMRSKGLKFDEFT 283
Query: 276 MTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQ 335
+TV+SACA G L KE L G+ ++L+ ++ K G +L V +++
Sbjct: 284 CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEME 343
Query: 336 ----VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVE 391
+ +N ++ G++KEA + M +KG+ PN +T+ +V+ A AG +
Sbjct: 344 ENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKED 403
Query: 392 EGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMTF---EPNSFIWGAL 448
E F SM E C+ P Y ++ LL K + ++M+ M PN W +
Sbjct: 404 EALKLFYSMKEAGCV-PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTM 462
Query: 449 LSGC 452
L+ C
Sbjct: 463 LALC 466
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 163/387 (42%), Gaps = 22/387 (5%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKAC-TLLMDSAAGKT 131
PN YNA+L RS++ + M NG P ++++++ C MD +
Sbjct: 419 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNR- 477
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAF-----AWTTMISAH 186
V + GF+ TL+ Y G DA K++ EM R F + +++A
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM-TRAGFNACVTTYNALLNAL 536
Query: 187 VRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVI-SW 241
R G+ S + +M + +++ M+ YAK GN E + NR+ + SW
Sbjct: 537 ARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSW 596
Query: 242 TTLMTCYSRN---KRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHY 298
L T N + F G PD V +++S + +
Sbjct: 597 MLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILES 656
Query: 299 LMVNGFGLDVYIGSSLIDMYAK---CGSIDRSLLVFYKLQVK-NLFCWNSMIDGLATHGY 354
+ +G D+ +SL+DMY + C + L K Q+K +L +N++I G G
Sbjct: 657 IREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGL 716
Query: 355 AKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYG 414
+EA++M SEM +GIRP T+ + ++ T G E M ++ C P +
Sbjct: 717 MQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDC-RPNELTFK 775
Query: 415 CMVDLLSKGGLIEDALEMIRGM-TFEP 440
+VD + G +A++ + + TF+P
Sbjct: 776 MVVDGYCRAGKYSEAMDFVSKIKTFDP 802
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 97/462 (20%), Positives = 181/462 (39%), Gaps = 28/462 (6%)
Query: 16 ILDQIKRCSKREKKTLESVYANMIKTNANQDSFLMNQFIAACTTINLATHA---FSHMDN 72
ILD + + +K L V M D F + ++AC L A F+ + +
Sbjct: 251 ILDVFGKMGRSWRKIL-GVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKS 309
Query: 73 ----PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAA 128
P + YNALL+ +AL+ +M N S +++ LV A S
Sbjct: 310 CGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKE 369
Query: 129 GKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE----RDAFAWTTMIS 184
V + K+G + TT+++ Y G +A K+F M E + + ++S
Sbjct: 370 AAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLS 429
Query: 185 AHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPC----K 236
+ + ++ +M N ATWN M+ G + +F M
Sbjct: 430 LLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEP 489
Query: 237 DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVH 296
D ++ TL++ Y R D ++ EM G +++A A G G+ V
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVI 549
Query: 297 HYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNLFCWNSMIDGLATHGYAK 356
+ GF S ++ YAK G+ + +++ +F ++ L +
Sbjct: 550 SDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC 609
Query: 357 EAL----KMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEH 412
AL + F+ ++ G +P+ V F S+L+ T ++ S+ ED +SP +
Sbjct: 610 RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRED-GLSPDLVT 668
Query: 413 YGCMVDLLSKGG---LIEDALEMIRGMTFEPNSFIWGALLSG 451
Y ++D+ + G E+ L+ + +P+ + ++ G
Sbjct: 669 YNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKG 710
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/451 (23%), Positives = 194/451 (43%), Gaps = 30/451 (6%)
Query: 77 VYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACT---LLMDSAAGKTVH 133
+++ L R + C R + A M GVVP S ++SL+ L+ D + ++
Sbjct: 60 LFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVS--LIY 117
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF-DEMPERDAFAWTTMISAHVRCGEV 192
+ G VF L+ + +G A + + + D + T+IS G
Sbjct: 118 SKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLA 177
Query: 193 DSAARLFDEMPE----RNSATWNAMIDGYAKSGNIECAEILFNRMPCKDVISWTTLMTCY 248
D A + EM + ++ ++N +IDG+ K GN A+ L + + ++I+ T L++ Y
Sbjct: 178 DEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSY 237
Query: 249 SRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDV 308
+ + +MV G PD V +++I+ G + G L+ + V
Sbjct: 238 Y---NLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEG----GLLLREMEEMSV 290
Query: 309 YIG----SSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALK 360
Y ++L+D K +L ++ ++ V+ +L + ++DGL G +EA K
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 361 MFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLL 420
F + PN VT+ +++ AG + M+E I P + Y M++
Sbjct: 351 TFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVI-PNVVTYSSMINGY 409
Query: 421 SKGGLIEDALEMIRGMTFE---PNSFIWGALLSGCKLHRNLEIANVAVQNLMILEPSNSG 477
K G++E+A+ ++R M + PN F +G ++ G E+A + + ++ +
Sbjct: 410 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN 469
Query: 478 Y-YSLLVNMYAEVNRWKEVSKIRIAMKDLGV 507
Y LVN + R KEV + M GV
Sbjct: 470 YILDALVNHLKRIGRIKEVKGLVKDMVSKGV 500
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 203/466 (43%), Gaps = 31/466 (6%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
PN + Y++++ V +A++ KM VVP +++ +++ +
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVR 188
+ G + + ++ LV +G + + + +M + D +T++I +
Sbjct: 457 SKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFK 516
Query: 189 CGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVIS 240
G+ ++A +EM ER + ++N +I G K G + A+ + M K D+ +
Sbjct: 517 GGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDIAT 575
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
+ +M + ++ L+ +M S G+ P ++ V+ G + + + +M
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSID-----RSLLVFYKLQVKNLFCWNSMIDGLATHGYA 355
+ ++ +D +K D L+ Y +++ +N++I L G
Sbjct: 636 LMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQ-VYNTLIATLCKLGMT 694
Query: 356 KEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGC 415
K+A + +ME +G P+ VTF S++ V + S + M+E ISP + Y
Sbjct: 695 KKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA-GISPNVATYNT 753
Query: 416 MVDLLSKGGLIEDA---LEMIRGMTFEPNSFIWGALLSGCKLHRNLEIANVAVQNLMI-- 470
++ LS GLI++ L ++ P+ F + AL+SG N++ ++ + MI
Sbjct: 754 IIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK-GSMTIYCEMIAD 812
Query: 471 -LEPSNSGYYSLLVNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSS 515
L P S Y++L++ +A V + + ++ +K++G P +S
Sbjct: 813 GLVPKTST-YNVLISEFANVGKMLQAREL---LKEMGKRGVSPNTS 854
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 173/409 (42%), Gaps = 26/409 (6%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
N + +AL+ R + M+ GV +++SL+ D A
Sbjct: 468 NNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWA 527
Query: 134 GHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRC 189
+ +RG V L+ G G A + M E+ D + M+++ +
Sbjct: 528 EEMQERGMPWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQ 586
Query: 190 GEVDSAARLFDEMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCKDV----ISW 241
G+ + +L+D+M + + + N ++ ++G +E A + N+M ++ ++
Sbjct: 587 GDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY 646
Query: 242 TTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMV 301
+ S++KR + ++S G+ T+I+ LG V +
Sbjct: 647 RIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEA 706
Query: 302 NGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK-----NLFCWNSMIDGLATHGYAK 356
GF D +SL+ Y GS R L Y + ++ N+ +N++I GL+ G K
Sbjct: 707 RGFIPDTVTFNSLMHGYF-VGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIK 765
Query: 357 EALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCM 416
E K SEM+ +G+RP+ T+ ++++ G ++ + + MI D + P Y +
Sbjct: 766 EVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLV-PKTSTYNVL 824
Query: 417 VDLLSKGGLIEDALEMIRGM---TFEPNSFIWGALLSG-CKL--HRNLE 459
+ + G + A E+++ M PN+ + ++SG CKL H ++E
Sbjct: 825 ISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVE 873
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 163/403 (40%), Gaps = 56/403 (13%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
PN + Y L+ + + ALA Y +M+
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMV------------------------------ 321
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVR 188
RG + V T L++ G +A K F + E + +T ++ +
Sbjct: 322 -----VRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCK 376
Query: 189 CGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVI----S 240
G++ SA + +M E+ N T+++MI+GY K G +E A L +M ++V+ +
Sbjct: 377 AGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFT 436
Query: 241 WTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLM 300
+ T++ + + + L EM G+ + + +++ +G + K + ++
Sbjct: 437 YGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMV 496
Query: 301 VNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAK 356
G LD +SLID++ K G + +L ++Q + ++ +N +I G+ G
Sbjct: 497 SKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG 556
Query: 357 EALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCM 416
A + M KGI P+ TF ++ + G EG + ++ I P + +
Sbjct: 557 -ADWAYKGMREKGIEPDIATFNIMMNSQRKQG-DSEGILKLWDKMKSCGIKPSLMSCNIV 614
Query: 417 VDLLSKGGLIEDALEMIRGMTF---EPNSFIWGALLSGCKLHR 456
V +L + G +E+A+ ++ M PN + L H+
Sbjct: 615 VGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK 657
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 118/231 (51%), Gaps = 9/231 (3%)
Query: 234 PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK 293
P +V+++ TL+ + + LF M RG+ PD +A +T+I G LG+G
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 294 EVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGL 349
++ + G LDV + SS ID+Y K G + + +V+ ++ + N+ + +I GL
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401
Query: 350 ATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPG 409
G EA M+ ++ ++G+ P+ VT+ S++ G + G + + MI+ P
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPD 460
Query: 410 IEHYGCMVDLLSKGGLIEDALEM---IRGMTFEPNSFIWGALLSG-CKLHR 456
+ YG +VD LSK GL+ A+ + G + N ++ +L+ G C+L+R
Sbjct: 461 VVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 155/332 (46%), Gaps = 25/332 (7%)
Query: 150 TLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMPER 205
TL+ + G A +F M +R D A++T+I + + G + +LF + +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 206 ----NSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNKRFGDV 257
+ +++ ID Y KSG++ A +++ RM C+ +V+++T L+ ++ R +
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 258 VTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDM 317
++ +++ RG+ P V +++I G L G ++ ++ G+ DV I L+D
Sbjct: 411 FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDG 470
Query: 318 YAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPN 373
+K G + ++ K+ + N+ +NS+IDG EALK+F M GI+P+
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPD 530
Query: 374 GVTFVSVL-TACTHAGFVEEGRS----RFVSMIEDYCISPGIEHYGCMVDLLSKGGLIED 428
TF +V+ + F + + + +++ IS I ++ LL K IED
Sbjct: 531 VATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 590
Query: 429 ALEMIRGMT---FEPNSFIWGALLSG-CKLHR 456
A + + EP+ + ++ G C L R
Sbjct: 591 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/455 (20%), Positives = 185/455 (40%), Gaps = 37/455 (8%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ + Y+ L+ + + L GV FSS + D A V
Sbjct: 319 PDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVV 378
Query: 133 HGHVWKRGFDAHVFVQTTLVE-------FYSMLGLAGDARKVFDEMPERDAFAWTTMISA 185
+ + +G +V T L++ Y G+ G ++ E ++++I
Sbjct: 379 YKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG---QILKRGMEPSIVTYSSLIDG 435
Query: 186 HVRCGEVDSAARLFDEMPE----RNSATWNAMIDGYAKSGNIECAEILFNRMPCK----D 237
+CG + S L+++M + + + ++DG +K G + A +M + +
Sbjct: 436 FCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLN 495
Query: 238 VISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISA-------CAHLGALG 290
V+ + +L+ + R RF + + +F M G+ PD TTV+ C H+
Sbjct: 496 VVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT- 554
Query: 291 LGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKL----QVKNLFCWNSMI 346
+G ++ + N D+ + + +I + KC I+ + F L ++ +N+MI
Sbjct: 555 IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 347 DGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL-TACTHAGFVEEGRSRFVSMIEDYC 405
G + EA ++F ++ PN VT ++ C + +G R S++ +
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM--DGAIRMFSIMAEKG 672
Query: 406 ISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---FEPNSFIWGALLSG-CKLHRNLEIA 461
P YGC++D SK IE + ++ M P+ + ++ G CK R E
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732
Query: 462 NVAVQNLMILEPSNSGYYSLLVNMYAEVNRWKEVS 496
N+ Q + + Y++L+ Y +V R E +
Sbjct: 733 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAA 767
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 167/403 (41%), Gaps = 28/403 (6%)
Query: 72 NPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKT 131
+PN + Y L++ R ++A Y ++L+ G+ P+ ++SSL+ + +G
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 132 VHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDAR----KVFDEMPERDAFAWTTMISAHV 187
++ + K G+ V + LV+ S GL A K+ + + + ++I
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 188 RCGEVDSAARLFDEMP----ERNSATWNA------MIDGYAKSGNIECAEILFNRMP--- 234
R D A ++F M + + AT+ M D + K LF+ M
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK 567
Query: 235 -CKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGK 293
D+ ++ + R D F+ ++ + PD V T+I L L +
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAE 627
Query: 294 EVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGL 349
+ L V FG + + LI + K +D ++ +F + K N + ++D
Sbjct: 628 RIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWF 687
Query: 350 ATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPG 409
+ + + K+F EM+ KGI P+ V++ ++ G V+E + F I D + P
Sbjct: 688 SKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKLLPD 746
Query: 410 IEHYGCMVDLLSK-GGLIEDAL---EMIRGMTFEPNSFIWGAL 448
+ Y ++ K G L+E AL M+R +P+ + AL
Sbjct: 747 VVAYAILIRGYCKVGRLVEAALLYEHMLRN-GVKPDDLLQRAL 788
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/400 (20%), Positives = 174/400 (43%), Gaps = 16/400 (4%)
Query: 49 LMNQFIAACTTINLATHAFSHMDNPNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVP 108
L + + A +N H+D + Y ++ + AL KM + P
Sbjct: 238 LEGRVLEAAALVNKMVGKGLHID---VVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKP 294
Query: 109 TSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVF 168
+S+++ + + + + ++G +VF +++ + G DA+++
Sbjct: 295 DVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLL 354
Query: 169 DEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKS 220
+M ER D + +ISA V+ G++ A +L DEM R ++ T+N+MI G+ K
Sbjct: 355 RDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKH 414
Query: 221 GNIECAEILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVI 280
+ A+ +F+ M DV+++ T++ Y R KR + + L E+ RGL + T+I
Sbjct: 415 NRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 281 SACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVKNL- 339
+ L +++ ++ +G D + L+ + + ++ +L +F +Q+ +
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534
Query: 340 ---FCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTACTHAGFVEEGRSR 396
+N +I G+ EA +F + G+ P+ T+ +++ + +
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594
Query: 397 FVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM 436
F M +D P Y ++ K G I+ ++E+I M
Sbjct: 595 FHKM-KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 194/476 (40%), Gaps = 68/476 (14%)
Query: 74 NALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVH 133
N +N L++ CH+ +L+ + K+ + G P +F++L+ L + +
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 134 GHVWKRGFDAHVFVQTTLVE---------FYSML------GLAGDARKVFDEMPER---- 174
G++ + GF V + +VE F +++ G +A + ++M +
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 175 DAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILF 230
D + T+++ + G+ SA L +M E + ++A+ID K G+ A+ LF
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 231 NRMPCK----DVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHL 286
+ M K +V ++ ++ + R+ D L +M+ R + PD + +ISA
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 287 GAL----GLGKEVHHYL----------MVNGF-----------------GLDVYIGSSLI 315
G L L E+ H M+ GF DV +++I
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Query: 316 DMYAKCGSIDRSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
D+Y + +D + + ++ V N +N++I G A +F EM G+
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 372 PNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALE 431
P+ +T +L +EE F +I+ I Y ++ + KG +++A +
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 432 MIRGMTF---EPNSFIWGALLSGCKLHRNLEIANVAVQNLMI--LEPSNSGYYSLL 482
+ + EP+ + ++SG + ANV + EP NS Y +L+
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLI 614
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 165/406 (40%), Gaps = 36/406 (8%)
Query: 79 NALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWK 138
N ++ V +R A++ Y KM + YSF+ L+K + + G + K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 139 RGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERDAFAWTTMISAHVRCGEVDSAARL 198
GF V TL+ + +A +F M V G +++ A L
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYM---------------VETGFLEAVA-L 213
Query: 199 FDEMPERNSA----TWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSR 250
FD+M E T+N +I+G G + A L N+M K DV+++ T++ +
Sbjct: 214 FDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 273
Query: 251 NKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYI 310
+ L +M + PD V + +I G + + ++ G +V+
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 311 GSSLIDMYAKCG---SIDRSLLVFYKLQVK-NLFCWNSMIDGLATHGYAKEALKMFSEME 366
+ +ID + G R L + ++ ++ +N++I G EA K+ EM
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Query: 367 RKGIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLI 426
+ I P+ VT+ S++ GF + R + D SP + + ++D+ + +
Sbjct: 394 HRCIFPDTVTYNSMI-----YGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRV 448
Query: 427 EDALEMIRGMT---FEPNSFIWGALLSGCKLHRNLEIANVAVQNLM 469
++ ++++R ++ N+ + L+ G NL A Q ++
Sbjct: 449 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 168/413 (40%), Gaps = 55/413 (13%)
Query: 163 DARKVFDEM----PERDAFAWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMI 214
DA FD M P A +I VR D A L+ +M R N ++N +I
Sbjct: 89 DAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILI 148
Query: 215 DGYAKSGNIECAEILFNRMP----CKDVISWTTLMTCYSRNKR---------------FG 255
+ + + F ++ DV+++ TL+ R F
Sbjct: 149 KCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFL 208
Query: 256 DVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLI 315
+ V LF +MV GL P + T+I+ G + + + ++ G +DV +++
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268
Query: 316 DMYAKCGSIDRSLLVFYKLQ----VKNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIR 371
+ K G +L + K++ ++ ++++ID L G+ +A +FSEM KGI
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328
Query: 372 PNGVTFVSVLTACTHAGFVEEGR----SRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIE 427
PN T+ C GF GR R + + + I+P + + ++ K G +
Sbjct: 329 PNVFTY-----NCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 428 DAL----EMIRGMTFEPNSFIWGALLSG-CKLHRNLEIANVAVQNLMILEPSNSGYYSLL 482
+A EM+ F P++ + +++ G CK +R + A ++ + ++ +
Sbjct: 384 EAEKLCDEMLHRCIF-PDTVTYNSMIYGFCKHNR----FDDAKHMFDLMASPDVVTFNTI 438
Query: 483 VNMYAEVNRWKEVSKIRIAMKDLGVEKTCPGSSWVEINQKIHLFAASDNYHTS 535
+++Y R E ++ + G+ ++ N IH F DN + +
Sbjct: 439 IDVYCRAKRVDEGMQLLREISRRGLV-----ANTTTYNTLIHGFCEVDNLNAA 486
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/316 (19%), Positives = 119/316 (37%), Gaps = 24/316 (7%)
Query: 32 ESVYANMIKTNANQDSFLMNQFIAACTTINLATHAFSHMDN-------PNALVYNALLRT 84
+ + +MI+ N D N I+A A D P+ + YN+++
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 85 CVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAH 144
+R A + M P +F++++ G + + +RG A+
Sbjct: 411 FCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFD 200
TL+ + + A+ +F EM D ++ +++ A LF+
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 201 EMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPC----KDVISWTTLMTCYSRNK 252
+ + ++ +N +I G K ++ A LF +P DV ++ +++ +
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
D LFH+M G PD T+I C G + E+ + NGF D +
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK 646
Query: 313 SLIDMYAKCGSIDRSL 328
+ D+ G +D+S
Sbjct: 647 MVADLITD-GRLDKSF 661
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 168/391 (42%), Gaps = 30/391 (7%)
Query: 38 MIKTNANQDSFLMNQFIAACTTINLATHAFSHMDN-------PNALVYNALLRTCVHCHR 90
M++ D+F I N A+ A + +D P+ + Y ++ C R
Sbjct: 179 MVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL--CKR 236
Query: 91 SHQALACYV--KMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQ 148
LA + KM + F++++ + + + +G +V
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 149 TTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFDEMPE 204
+L+ G DA ++ M E+ + + +I A + G++ A +L +EM +
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 205 R----NSATWNAMIDGYAKSGNIECAEILFNRMPCKDVI----SWTTLMTCYSRNKRFGD 256
R ++ T+N +I+G+ ++ A+ +F M KD + ++ TL+ + + KR D
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 257 VVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLID 316
V LF EM RGL + V TT+I G + V ++ N D+ S L+
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 317 MYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRP 372
G +D +L++F LQ N+F +N+MI+G+ G EA +F + I+P
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKP 533
Query: 373 NGVTFVSVLTACTHAGFVEEGRSRFVSMIED 403
+ VT+ ++++ ++E F M ED
Sbjct: 534 DVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 191/450 (42%), Gaps = 55/450 (12%)
Query: 88 CHRSHQ--ALACYVKMLRNGVVPTSYSFSSLVKA-CTLLMDSAAGKTVHGHVWKRGFDAH 144
C RS ALA KM++ G P + SSL+ C S A V V + G+
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-EMGYKPD 187
Query: 145 VFVQTTLVEFYSMLGLAGDARKVFDEMPER----DAFAWTTMISAHVRCGEVDSAARLFD 200
F TTL+ + A +A + D+M +R D + T+++ + G++D A L +
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLN 247
Query: 201 EMP----ERNSATWNAMIDGYAKSGNIECAEILFNRMPCK----DVISWTTLMTCYSRNK 252
+M + N +N +ID K ++E A LF M K +V+++ +L+ C
Sbjct: 248 KMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYG 307
Query: 253 RFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGS 312
R+ D L M+ + + P+ V +I A G L +++H ++ D +
Sbjct: 308 RWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYN 367
Query: 313 SLIDMYAKCGSIDRSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALKMFSEMERK 368
LI+ + +D + +F + K N+ +N++I+G ++ +++F EM ++
Sbjct: 368 LLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Query: 369 GIRPNGVTFVSVLTACTHAGFVEEGRSRFVSMIED--------YCI-------------- 406
G+ N VT+ +++ AG + + F M+ + Y I
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 407 ------------SPGIEHYGCMVDLLSKGGLIEDALEMIRGMTFEPNSFIWGALLSGCKL 454
I Y M++ + K G + +A ++ ++ +P+ + ++SG
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCS 547
Query: 455 HRNLEIANVAVQNLMILEP-SNSGYYSLLV 483
R L+ A+ + + NSG Y+ L+
Sbjct: 548 KRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 151/356 (42%), Gaps = 51/356 (14%)
Query: 60 INLATHAFSHMDN----PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSS 115
+ +A F+ M+ PN + YN+L+ + R A ML + P +F++
Sbjct: 274 VEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 116 LVKACTLLMDSAAGKTVHGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPERD 175
L+ A + +H + +R D L+ + M +A+++F M +D
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 176 AF----AWTTMISAHVRCGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAE 227
+ T+I+ +C V+ LF EM +R N+ T+ +I G+ ++G+ + A+
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 228 ILFNRMPCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRGLAPDEVAMTTVISACAHLG 287
++ F +MVS + D + + ++ G
Sbjct: 454 MV-------------------------------FKQMVSNRVPTDIMTYSILLHGLCSYG 482
Query: 288 ALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSLLVFYKLQVK-NLFCWNSMI 346
L + YL + L+++I +++I+ K G + + +F L +K ++ +N+MI
Sbjct: 483 KLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMI 542
Query: 347 DGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTA----CTHAG---FVEEGRS 395
GL + +EA +F +M+ G PN T+ +++ A C A ++E RS
Sbjct: 543 SGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 166/354 (46%), Gaps = 25/354 (7%)
Query: 163 DARKVFDEMPERDAFA----WTTMISAHVRCGEVDSAARLFDEMP----ERNSATWNAMI 214
DA +F +M + F + ++SA + + + L ++M + T++ I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 215 DGYAKSGNIECAEILFNRM------PCKDVISWTTLMTCYSRNKRFGDVVTLFHEMVSRG 268
+ + + + A + +M P D+++ ++L+ Y +KR D V L +MV G
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEP--DIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 269 LAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSIDRSL 328
PD TT+I + ++ G D+ ++++ K G ID +L
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 329 LVFYKLQV----KNLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVLTAC 384
+ K++ N+ +N++ID L + + + A+ +F+EME KGIRPN VT+ S++
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 385 THAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGM---TFEPN 441
+ G + SR +S + + I+P + + ++D K G + +A ++ M + +P+
Sbjct: 304 CNYGRWSDA-SRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPD 362
Query: 442 SFIWGALLSGCKLHRNLEIANVAVQNLMILE-PSNSGYYSLLVNMYAEVNRWKE 494
+ + L++G +H L+ A + ++ + N Y+ L+N + + R ++
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/436 (19%), Positives = 178/436 (40%), Gaps = 56/436 (12%)
Query: 73 PNALVYNALLRTCVHCHRSHQALACYVKMLRNGVVPTSYSFSSLVKACTLLMDSAAGKTV 132
P+ + +N LL ++ ++ +M G+ Y++S + + V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 133 HGHVWKRGFDAHVFVQTTLVEFYSMLGLAGDARKVFDEMPE----RDAFAWTTMISAHVR 188
+ K G++ + ++L+ Y DA + D+M E D F +TT+I
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 189 CGEVDSAARLFDEMPER----NSATWNAMIDGYAKSGNIECAEILFNRMP---------- 234
+ A L D+M +R + T+ +++G K G+I+ A L N+M
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 235 --------CK---------------------DVISWTTLMTCYSRNKRFGDVVTLFHEMV 265
CK +V+++ +L+ C R+ D L M+
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 266 SRGLAPDEVAMTTVISACAHLGALGLGKEVHHYLMVNGFGLDVYIGSSLIDMYAKCGSID 325
+ + P+ V +I A G L +++H ++ D + LI+ + +D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 326 RSLLVFYKLQVK----NLFCWNSMIDGLATHGYAKEALKMFSEMERKGIRPNGVTFVSVL 381
+ +F + K N+ +N++I+G ++ +++F EM ++G+ N VT+ +++
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 382 TACTHAGFVEEGRSRFVSMIEDYCISPGIEHYGCMVDLLSKGGLIEDALEMIRGMT---F 438
AG + + F M+ + + I Y ++ L G ++ AL + + +
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNR-VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 439 EPNSFIWGALLSG-CK 453
E N FI+ ++ G CK
Sbjct: 500 ELNIFIYNTMIEGMCK 515