Miyakogusa Predicted Gene
- Lj1g3v3542660.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3542660.2 tr|D7LUF3|D7LUF3_ARALL Pentatricopeptide
repeat-containing protein OS=Arabidopsis lyrata subsp.
lyra,42.61,2e-18,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR: pentatricopeptide repeat domain,P,CUFF.30911.2
(318 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 521 e-148
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 298 4e-81
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 2e-79
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 163 2e-40
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 162 2e-40
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 142 4e-34
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 137 9e-33
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 2e-27
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 119 4e-27
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 4e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 9e-26
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 2e-25
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 3e-25
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 3e-25
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 3e-25
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 4e-25
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 4e-25
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 5e-25
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 9e-25
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 110 1e-24
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 7e-24
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 107 1e-23
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 2e-23
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 3e-23
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 3e-23
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 105 5e-23
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 7e-23
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 8e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 9e-23
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 103 1e-22
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 103 1e-22
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 1e-22
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 1e-22
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 3e-22
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 3e-22
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 102 3e-22
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 7e-22
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 7e-22
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 8e-22
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 1e-21
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 1e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 3e-21
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 3e-21
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 99 5e-21
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 98 6e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 98 7e-21
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 98 7e-21
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 9e-21
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 1e-20
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 1e-20
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 3e-20
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 3e-20
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 3e-20
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 4e-20
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 6e-20
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 95 7e-20
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 94 1e-19
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 1e-19
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 2e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 2e-19
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 93 2e-19
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 4e-19
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 4e-19
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 92 4e-19
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 5e-19
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 6e-19
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 7e-19
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 9e-19
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 2e-18
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 90 2e-18
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 2e-18
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 3e-18
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 3e-18
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 6e-18
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 6e-18
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 1e-17
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 87 1e-17
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 1e-17
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 3e-17
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 3e-17
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 86 3e-17
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 86 4e-17
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 4e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 4e-17
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 5e-17
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 85 6e-17
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 8e-17
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 9e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 1e-16
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 3e-16
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 3e-16
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 5e-16
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 6e-16
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 8e-16
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 80 1e-15
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 1e-15
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 80 2e-15
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 2e-15
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 3e-15
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 4e-15
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 4e-15
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 6e-15
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 6e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 78 8e-15
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 1e-14
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 1e-14
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 76 3e-14
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 4e-14
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 72 4e-13
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 6e-13
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 72 6e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 1e-12
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 3e-12
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 6e-12
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 7e-12
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 9e-12
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 3e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 66 3e-11
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 3e-11
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 4e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 4e-11
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 5e-11
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 7e-11
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 1e-10
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 64 1e-10
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 64 2e-10
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 2e-10
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 4e-10
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 62 4e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 4e-10
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 62 5e-10
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 5e-10
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 8e-10
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 8e-10
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 8e-10
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 61 1e-09
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 1e-09
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 2e-09
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 60 2e-09
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 60 3e-09
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 3e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 4e-09
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 5e-09
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 59 5e-09
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 59 5e-09
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 59 5e-09
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 7e-09
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 7e-09
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 9e-09
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 58 1e-08
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 1e-08
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 2e-08
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 55 7e-08
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 54 2e-07
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 54 2e-07
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 2e-07
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 3e-07
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 4e-07
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 5e-07
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 52 6e-07
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 52 8e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 51 8e-07
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 9e-07
AT2G17033.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 9e-07
AT2G17033.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 51 1e-06
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 51 1e-06
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 1e-06
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 1e-06
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 51 1e-06
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 51 1e-06
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 1e-06
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 1e-06
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 50 2e-06
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 50 3e-06
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 50 3e-06
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 50 3e-06
AT2G48000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-06
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 49 6e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 6e-06
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 8e-06
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 9e-06
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 521 bits (1342), Expect = e-148, Method: Compositional matrix adjust.
Identities = 245/317 (77%), Positives = 284/317 (89%), Gaps = 5/317 (1%)
Query: 2 KNSKIASQKAVSVILRREATKAIIDKRRKKGPINSKKLLPRTVLEALHERVTALRWESAL 61
KN+KIAS+KA+S+ILRREATK+II+K KKG SKKLLPRTVLE+LHER+TALRWESA+
Sbjct: 80 KNTKIASRKAISIILRREATKSIIEK--KKG---SKKLLPRTVLESLHERITALRWESAI 134
Query: 62 KVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSA 121
+VFELLREQLWY+PN G+Y+KLIVMLGKCKQPEKA ELFQ M++EGCVV+ E YTAL+SA
Sbjct: 135 QVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSA 194
Query: 122 YSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKP 181
YSRSG + AF+LLE MKS+ CQPDV TYSILIKS L+VFAFDKVQ LLSDM GI+P
Sbjct: 195 YSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRP 254
Query: 182 NTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERC 241
NT+TYNTLIDAYGKAK F EMESTL++ML + DC+PD WTMNSTLRAFG GQI+ ME C
Sbjct: 255 NTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENC 314
Query: 242 YDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
Y+KFQ++GI+PN++TFNILLDSYGK +YKKMSAVMEYMQKYHYSWTIVTYN+VIDAFG+
Sbjct: 315 YEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR 374
Query: 302 AGDLQQMEYLFRLMRSE 318
AGDL+QMEYLFRLM+SE
Sbjct: 375 AGDLKQMEYLFRLMQSE 391
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 125/245 (51%), Gaps = 3/245 (1%)
Query: 74 RPNSGVYIKLIVMLGKCKQ-PEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
RPN+ Y LI GK K E L Q + ++ C D + + L A+ +G +E
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMME 312
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
+ E+ +S+ G +P+++T++IL+ S + + K+ ++ M + VTYN +IDA
Sbjct: 313 NCYEKFQSS-GIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDA 371
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
+G+A +ME M ++R P T+ S +RA+G + D + + + I+
Sbjct: 372 FGRAGDLKQMEYLFRLMQSER-IFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRL 430
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
++ FN L+D+YG+ + +M V+E M+K + +TY ++ A+ +G ++ L
Sbjct: 431 DLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELH 490
Query: 313 RLMRS 317
++ S
Sbjct: 491 GVVES 495
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 298 bits (763), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/300 (49%), Positives = 197/300 (65%), Gaps = 10/300 (3%)
Query: 29 RKKGPI-NSKKLLPR---------TVLEALHERVTALRWESALKVFELLREQLWYRPNSG 78
+++ PI N KK L R TV E L + + +W AL+VF++LREQ +Y+P G
Sbjct: 66 QRRTPIKNVKKKLDRRSKANGWVNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEG 125
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
Y+KL+V+LGK QP +A +LF M++EG E YTALL+AY+RS L++ AFS+L++M
Sbjct: 126 TYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKM 185
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
KS P CQPDV TYS L+K+C++ FD V L +M I PNTVT N ++ YG+ R
Sbjct: 186 KSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGR 245
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFN 258
F +ME L +ML C+PDVWTMN L FGN+G+ID ME Y+KF+ GI+P +TFN
Sbjct: 246 FDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFN 305
Query: 259 ILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
IL+ SYGK Y KMS+VMEYM+K + WT TYN +I+AF GD + ME F MRSE
Sbjct: 306 ILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSE 365
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 147/315 (46%), Positives = 211/315 (66%), Gaps = 8/315 (2%)
Query: 5 KIASQKAVSVILRREATKAIIDKRRKKGPINSKKLL---PRTVLEALHERVTALRWESAL 61
++ +K +S ILR +A I+++ NS+K L P+ VLEAL E + RW+SAL
Sbjct: 74 QVDPKKELSRILRTDAAVKGIERKA-----NSEKYLTLWPKAVLEALDEAIKENRWQSAL 128
Query: 62 KVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSA 121
K+F LLR+Q WY P Y KL +LG CKQP++A LF+ M+ EG + YT+L+S
Sbjct: 129 KIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPTIDVYTSLISV 188
Query: 122 YSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKP 181
Y +S LL++AFS LE MKS C+PDV T+++LI C ++ FD V+ ++ +M+ G+
Sbjct: 189 YGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGC 248
Query: 182 NTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERC 241
+TVTYNT+ID YGKA F EMES L +M+ D D PDV T+NS + ++GN + ME
Sbjct: 249 STVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESW 308
Query: 242 YDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
Y +FQ G+QP++ TFNIL+ S+GK YKKM +VM++M+K +S T VTYNIVI+ FGK
Sbjct: 309 YSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGK 368
Query: 302 AGDLQQMEYLFRLMR 316
AG +++M+ +FR M+
Sbjct: 369 AGRIEKMDDVFRKMK 383
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 88/165 (53%), Gaps = 5/165 (3%)
Query: 100 FQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCL 159
FQ M G D ++ L+ ++ ++G+ ++ S+++ M+ V TY+I+I++
Sbjct: 312 FQLM---GVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTV-TYNIVIETFG 367
Query: 160 EVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDV 219
+ +K+ + M G+KPN++TY +L++AY KA +++S L +++ + D D
Sbjct: 368 KAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIV-NSDVVLDT 426
Query: 220 WTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY 264
N + A+G G + TM+ Y + + +P+ TF ++ +Y
Sbjct: 427 PFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 471
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 144/261 (55%), Gaps = 5/261 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+W L+VF +++Q WY P++GVY KLI ++GK Q A+ LF M + GC D Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171
Query: 116 TALLSAY----SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
AL++A+ ++ LE+ L++MK CQP+V TY+IL+++ + D+V L
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231
Query: 172 SDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
D+ + + P+ T+N ++DAYGK EME+ L M ++ +C+PD+ T N + ++G
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN-ECKPDIITFNVLIDSYGK 290
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVT 291
+ + ME+ + + +P + TFN ++ +YGK K V + M +Y + +T
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Query: 292 YNIVIDAFGKAGDLQQMEYLF 312
Y +I +G G + + +F
Sbjct: 351 YECMIMMYGYCGSVSRAREIF 371
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
Query: 109 VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQ 168
VV C+ L +S + + M+ PD YS LI +
Sbjct: 94 VVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAM 153
Query: 169 GLLSDMAIHGIKPNTVTYNTLIDAY----GKAKRFSEMESTLVEMLADRDCQPDVWTMNS 224
L S+M G +P+ YN LI A+ KAK ++ L +M CQP+V T N
Sbjct: 154 WLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNI 213
Query: 225 TLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYH 284
LRAF G++D + + + + P+V TFN ++D+YGK K+M AV+ M+
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 285 YSWTIVTYNIVIDAFGKAGDLQQMEYLFR-LMRSE 318
I+T+N++ID++GK + ++ME F+ LMRS+
Sbjct: 274 CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
Y P+ Y +I+M G C +A E+F+ + + V+ + A+L Y R+GL A
Sbjct: 344 YIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEAD 403
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L S PD TY L K+ + ++VQ L+ M GI PN + ++
Sbjct: 404 KLFHNA-SAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEV 462
Query: 193 YG 194
+G
Sbjct: 463 FG 464
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 144/261 (55%), Gaps = 5/261 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+W L+VF +++Q WY P++GVY KLI ++GK Q A+ LF M + GC D Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171
Query: 116 TALLSAY----SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
AL++A+ ++ LE+ L++MK CQP+V TY+IL+++ + D+V L
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231
Query: 172 SDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
D+ + + P+ T+N ++DAYGK EME+ L M ++ +C+PD+ T N + ++G
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN-ECKPDIITFNVLIDSYGK 290
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVT 291
+ + ME+ + + +P + TFN ++ +YGK K V + M +Y + +T
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Query: 292 YNIVIDAFGKAGDLQQMEYLF 312
Y +I +G G + + +F
Sbjct: 351 YECMIMMYGYCGSVSRAREIF 371
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
Query: 109 VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQ 168
VV C+ L +S + + M+ PD YS LI +
Sbjct: 94 VVRCDHCFLLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAM 153
Query: 169 GLLSDMAIHGIKPNTVTYNTLIDAY----GKAKRFSEMESTLVEMLADRDCQPDVWTMNS 224
L S+M G +P+ YN LI A+ KAK ++ L +M CQP+V T N
Sbjct: 154 WLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNI 213
Query: 225 TLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYH 284
LRAF G++D + + + + P+V TFN ++D+YGK K+M AV+ M+
Sbjct: 214 LLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNE 273
Query: 285 YSWTIVTYNIVIDAFGKAGDLQQMEYLFR-LMRSE 318
I+T+N++ID++GK + ++ME F+ LMRS+
Sbjct: 274 CKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
Y P+ Y +I+M G C +A E+F+ + + V+ + A+L Y R+GL A
Sbjct: 344 YIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEAD 403
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L S PD TY L K+ + ++VQ L+ M GI PN + ++
Sbjct: 404 KLFHNA-SAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEV 462
Query: 193 YG 194
+G
Sbjct: 463 FG 464
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 142 bits (357), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 144/297 (48%), Gaps = 36/297 (12%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
W+ +L++F+ ++ Q+W +PN +Y +I +LG+ +K LE+F M +G SYT
Sbjct: 121 WQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYT 180
Query: 117 ALLSAYSRSGLLERAFSLLEEMKS---TP------------------------------- 142
AL++AY R+G E + LL+ MK+ +P
Sbjct: 181 ALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRH 240
Query: 143 -GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
G QPD+ TY+ L+ +C D+ + + M GI P+ TY+ L++ +GK +R +
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
+ L EM A PD+ + N L A+ G I + + Q AG PN T+++LL
Sbjct: 301 VCDLLGEM-ASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL 359
Query: 262 DSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ +G+ Y + + M+ + TYNI+I+ FG+ G +++ LF M E
Sbjct: 360 NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE 416
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 141/300 (47%), Gaps = 6/300 (2%)
Query: 17 RREATKAIIDKRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPN 76
R E + ++D R K I+ L TV+ A L WE L +F +R + +P+
Sbjct: 191 RYETSLELLD-RMKNEKISPSILTYNTVINACAR--GGLDWEGLLGLFAEMRHE-GIQPD 246
Query: 77 SGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLE 136
Y L+ ++A +F+ M D G V D +Y+ L+ + + LE+ LL
Sbjct: 247 IVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLG 306
Query: 137 EMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKA 196
EM S G PD+ +Y++L+++ + + + G+ M G PN TY+ L++ +G++
Sbjct: 307 EMASG-GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQS 365
Query: 197 KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQT 256
R+ ++ +EM + + PD T N + FG G + + I+P+++T
Sbjct: 366 GRYDDVRQLFLEMKSS-NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Query: 257 FNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ ++ + GKG ++ +++YM + Y VI+AFG+A ++ F M
Sbjct: 425 YEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMH 484
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 2/206 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y +I GK E A ++ Q M V ++YT ++ A+ ++ L E A
Sbjct: 420 PDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVA 479
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
M G P ++T+ L+ S + + +LS + GI N T+N I+AY
Sbjct: 480 FNTMHEV-GSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYK 538
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+ +F E T V+M R C PD T+ + L + +D +++ + + I P++
Sbjct: 539 QGGKFEEAVKTYVDMEKSR-CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSI 597
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYM 280
+ ++L YGK + ++ ++E M
Sbjct: 598 MCYCMMLAVYGKTERWDDVNELLEEM 623
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 2/208 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN+ Y L+ + G+ + + +LF M D +Y L+ + G + +L
Sbjct: 350 PNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTL 409
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+M +PD++TY +I +C + + + +L M + I P++ Y +I+A+G
Sbjct: 410 FHDMVEE-NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFG 468
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+A + E M + P + T +S L +F G + E + +GI N
Sbjct: 469 QAALYEEALVAFNTM-HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQK 282
TFN +++Y +G +++ M+K
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYVDMEK 555
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 99/238 (41%), Gaps = 35/238 (14%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
+ + ++ G +R+ L + M+ C+P+ Y+I+I DK + +M
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEM 167
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR--------------------- 213
G+ + +Y LI+AYG+ R+ L M ++
Sbjct: 168 PSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLD 227
Query: 214 --------------DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
QPD+ T N+ L A G D E + GI P++ T++
Sbjct: 228 WEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
L++++GK +K+ ++ M I +YN++++A+ K+G +++ +F M++
Sbjct: 288 LVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 100/224 (44%), Gaps = 13/224 (5%)
Query: 44 VLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAM 103
V+EA + A +E AL F + E + P+ + L+ + +++ + +
Sbjct: 463 VIEAFGQ---AALYEEALVAFNTMHE-VGSNPSIETFHSLLYSFARGGLVKESEAILSRL 518
Query: 104 VDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFA 163
VD G + +++ A + AY + G E A +M+ + C PD +T +++ L V++
Sbjct: 519 VDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSR-CDPDERT----LEAVLSVYS 573
Query: 164 F----DKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDV 219
F D+ + +M I P+ + Y ++ YGK +R+ ++ L EML++R
Sbjct: 574 FARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQ 633
Query: 220 WTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS 263
+ + +E DK + G ++ +N LLD+
Sbjct: 634 VIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDA 677
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 137 bits (345), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 140/269 (52%), Gaps = 19/269 (7%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVD-CESY 115
W+ AL+VFE L + W+ PN+ + ++ +LG+ Q A+E+F E V D + Y
Sbjct: 171 WQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRA--EPTVGDRVQVY 228
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
A++ YSRSG +A L++ M+ GC PD+ +++ LI + L K GL ++A
Sbjct: 229 NAMMGVYSRSGKFSKAQELVDAMRQR-GCVPDLISFNTLINARL------KSGGLTPNLA 281
Query: 176 IH--------GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLR 227
+ G++P+ +TYNTL+ A + +M A R CQPD+WT N+ +
Sbjct: 282 VELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHR-CQPDLWTYNAMIS 340
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW 287
+G G ER + + + G P+ T+N LL ++ + + +K+ V + MQK +
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 288 TIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+TYN +I +GK G L L++ M+
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMK 429
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 68/138 (49%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ P++ Y L+ + + EK E++Q M G D +Y ++ Y + G L+ A
Sbjct: 363 FFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLAL 422
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L ++MK G PD TY++LI S + + L+S+M GIKP TY+ LI
Sbjct: 423 QLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICG 482
Query: 193 YGKAKRFSEMESTLVEML 210
Y KA + E E T ML
Sbjct: 483 YAKAGKREEAEDTFSCML 500
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 114/257 (44%), Gaps = 5/257 (1%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
W+ A V LR Q P+ + L+ +C E+A +F M+ +G ES
Sbjct: 768 WQKAESVVGNLR-QSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESIN 826
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
LL A G LE + ++EE++ G + + +++ + +V+ + S M
Sbjct: 827 ILLHALCVDGRLEELYVVVEELQDM-GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKA 885
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEML-ADRDCQPDVWTMNSTLRAFGNLGQI 235
G P Y +I+ K KR + E + EM A+ + +W NS L+ + +
Sbjct: 886 AGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIW--NSMLKMYTAIEDY 943
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+ Y + + G++P+ T+N L+ Y + ++ +M+ M+ + TY +
Sbjct: 944 KKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSL 1003
Query: 296 IDAFGKAGDLQQMEYLF 312
I AFGK L+Q E LF
Sbjct: 1004 ISAFGKQKCLEQAEQLF 1020
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 107/232 (46%), Gaps = 2/232 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
Y P +Y +I +L K K+ A + M + V+ + ++L Y+ ++
Sbjct: 888 YLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTV 947
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
+ + +K T G +PD TY+ LI ++ L+ M G+ P TY +LI A
Sbjct: 948 QVYQRIKET-GLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISA 1006
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
+GK K + E E+L+ + + D ++ ++ + G E+ + AGI+P
Sbjct: 1007 FGKQKCLEQAEQLFEELLS-KGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEP 1065
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
+ T ++L+ SY + ++ V+ ++ T + Y+ VIDA+ ++ D
Sbjct: 1066 TLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKD 1117
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
AL++++ ++ P++ Y LI LGK + +A L M+D G ++Y+AL+
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALI 480
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
Y+++G E A M + G +PD YS+++ L K GL DM G
Sbjct: 481 CGYAKAGKREEAEDTFSCMLRS-GTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGH 539
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEM 209
P+ Y +I K R +++ T+ +M
Sbjct: 540 TPSYTLYELMILGLMKENRSDDIQKTIRDM 569
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 69/132 (52%), Gaps = 1/132 (0%)
Query: 186 YNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKF 245
Y +I+AYGK K + + ES +V L PD+ T NS + A+ G + ++
Sbjct: 755 YTDIIEAYGKQKLWQKAES-VVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 246 QTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
G P V++ NILL + +++ V+E +Q + + + +++DAF +AG++
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 306 QQMEYLFRLMRS 317
+++ ++ M++
Sbjct: 874 FEVKKIYSSMKA 885
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 76/149 (51%), Gaps = 4/149 (2%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P Y LI GK K E+A +LF+ ++ +G +D Y ++ SG +A L
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKL 1054
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L+ MK+ G +P + T +L+ S + + +LS++ ++ T+ Y+++IDAY
Sbjct: 1055 LQMMKNA-GIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYL 1113
Query: 195 KAKRFSEMESTLVEMLADRDCQPD--VWT 221
++K ++ L+EM +PD +WT
Sbjct: 1114 RSKDYNSGIERLLEM-KKEGLEPDHRIWT 1141
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/225 (18%), Positives = 103/225 (45%), Gaps = 7/225 (3%)
Query: 69 EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL 128
E+ ++ ++ ++ M + +K ++++Q + + G D +Y L+ Y R
Sbjct: 919 EEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRP 978
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
E + L+++M++ G P + TY LI + + ++ + L ++ G+K + Y+T
Sbjct: 979 EEGYLLMQQMRNL-GLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHT 1037
Query: 189 LIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA 248
++ + S+ E L++M+ + +P + TM+ + ++ + G E+ +
Sbjct: 1038 MMKISRDSGSDSKAEK-LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDT 1096
Query: 249 GIQPNVQTFNILLDSYGKGHDYKK-----MSAVMEYMQKYHYSWT 288
++ ++ ++D+Y + DY + E ++ H WT
Sbjct: 1097 EVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWT 1141
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 143/296 (48%), Gaps = 7/296 (2%)
Query: 23 AIIDKRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIK 82
++D+ R KG + + TVL A R LR A + F L+ Y P + Y
Sbjct: 267 GVLDEMRSKG-LKFDEFTCSTVLSAC-AREGLLR--EAKEFFAELK-SCGYEPGTVTYNA 321
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
L+ + GK +AL + + M + C D +Y L++AY R+G + A ++E M +
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIE-MMTKK 380
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G P+ TY+ +I + + D+ L M G PNT TYN ++ GK R +EM
Sbjct: 381 GVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEM 440
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
L +M ++ C P+ T N+ L GN G + R + + ++ G +P+ TFN L+
Sbjct: 441 IKMLCDMKSN-GCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLIS 499
Query: 263 SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+YG+ S + M + ++ + TYN +++A + GD + E + M+S+
Sbjct: 500 AYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSK 555
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 130/275 (47%), Gaps = 26/275 (9%)
Query: 56 RWESALKVFELLREQLWYRPNSGVY------IKLIV-MLGKCKQPEKALELFQAMVDEGC 108
WE A+ +FE L NSG I++ V +LG+ Q A +L + +
Sbjct: 151 HWERAVFLFEWL----VLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEY 206
Query: 109 VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVF-----A 163
++D +YT +L AYSR+G E+A L E MK G P + TY+++ L+VF +
Sbjct: 207 LLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM-GPSPTLVTYNVI----LDVFGKMGRS 261
Query: 164 FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC--QPDVWT 221
+ K+ G+L +M G+K + T +T++ A + E + E+ + C +P T
Sbjct: 262 WRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL---KSCGYEPGTVT 318
Query: 222 MNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQ 281
N+ L+ FG G + + + T+N L+ +Y + K+ + V+E M
Sbjct: 319 YNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMT 378
Query: 282 KYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
K +TY VIDA+GKAG + LF M+
Sbjct: 379 KKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMK 413
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 108/235 (45%), Gaps = 2/235 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ P+ + LI G+C A +++ M G +Y ALL+A +R G
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGE 546
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
+++ +MKS G +P +YS++++ + + ++ + + + I P+ + TL+ A
Sbjct: 547 NVISDMKSK-GFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLA 605
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
K + + E + +PD+ NS L F D E + + G+ P
Sbjct: 606 NFKCRALAGSERAFT-LFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSP 664
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
++ T+N L+D Y + + K +++ ++K +V+YN VI F + G +Q+
Sbjct: 665 DLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQE 719
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 96/191 (50%), Gaps = 14/191 (7%)
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFA----FDKVQGLLSDMAIHGIKPNTV 184
ERAF+L ++ G +PD+ ++ S L +F +D+ +G+L + G+ P+ V
Sbjct: 616 ERAFTLFKKH----GYKPDM----VIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLV 667
Query: 185 TYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDK 244
TYN+L+D Y + + E L + L +PD+ + N+ ++ F G + R +
Sbjct: 668 TYNSLMDMYVRRGECWKAEEIL-KTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSE 726
Query: 245 FQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
GI+P + T+N + Y + ++ V+E M K +T+ +V+D + +AG
Sbjct: 727 MTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGK 786
Query: 305 LQQ-MEYLFRL 314
+ M+++ ++
Sbjct: 787 YSEAMDFVSKI 797
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/241 (21%), Positives = 109/241 (45%), Gaps = 2/241 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN + ++ + G + +F+ M G D +++ L+SAY R G A +
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
EM + G V TY+ L+ + + + ++SDM G KP +Y+ ++ Y
Sbjct: 514 YGEM-TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 572
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
K + +E + + + P + + L A + ER + F+ G +P++
Sbjct: 573 KGGNYLGIER-IENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDM 631
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
FN +L + + + Y + ++E +++ S +VTYN ++D + + G+ + E + +
Sbjct: 632 VIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKT 691
Query: 315 M 315
+
Sbjct: 692 L 692
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
++ A + E +RE P+ Y L+ M + + KA E+ + + D SY
Sbjct: 647 YDQAEGILESIRED-GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYN 705
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
++ + R GL++ A +L EM + G +P + TY+ + + F +++ ++ MA
Sbjct: 706 TVIKGFCRRGLMQEAVRMLSEM-TERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAK 764
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSE 201
+ +PN +T+ ++D Y +A ++SE
Sbjct: 765 NDCRPNELTFKMVVDGYCRAGKYSE 789
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 118/241 (48%), Gaps = 1/241 (0%)
Query: 52 VTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVD 111
V A + AL ++ L + P + Y LI L K + +A +LF+ M+D GC +
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Query: 112 CESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
C Y L++ + ++G + A +L + M G +PD++TYS+L+ V D+
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRM-VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 172 SDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
++ G+ P+ V YN +I+ GK+ R E EM R PD++T NS + G
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGI 1044
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVT 291
G ++ + Y++ Q AG++PNV TFN L+ Y + AV + M +S T
Sbjct: 1045 AGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGT 1104
Query: 292 Y 292
Y
Sbjct: 1105 Y 1105
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 8/280 (2%)
Query: 39 LLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALE 98
L+P H V+ R +FE + L +P Y LI L + E A +
Sbjct: 752 LVPIIRYSCKHNNVSGAR-----TLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQD 806
Query: 99 LFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSC 158
+F + GC+ D +Y LL AY +SG ++ F L +EM ST C+ + T++I+I
Sbjct: 807 VFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM-STHECEANTITHNIVISGL 865
Query: 159 LEVFAFDKVQGLLSD-MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQP 217
++ D L D M+ P TY LID K+ R E + L E + D C+P
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQ-LFEGMLDYGCRP 924
Query: 218 DVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM 277
+ N + FG G+ D + + G++P+++T+++L+D +
Sbjct: 925 NCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYF 984
Query: 278 EYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+ +++ + +V YN++I+ GK+ L++ LF M++
Sbjct: 985 KELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKT 1024
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 130/280 (46%), Gaps = 13/280 (4%)
Query: 46 EALHERVTALRWESALK----VFELLREQLWYRPNSGVYIKLIVML---GKCKQPEKALE 98
E + + ALR + L+ VF+L+++++ R ++ Y+ + L G KQ AL
Sbjct: 119 ETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKR-DTNTYLTIFKSLSVKGGLKQAPYAL- 176
Query: 99 LFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSC 158
+ M + G V++ SY L+ +S A + M G +P +QTYS L+
Sbjct: 177 --RKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM-ILEGFRPSLQTYSSLMVGL 233
Query: 159 LEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
+ D V GLL +M G+KPN T+ I G+A + +E L M D C PD
Sbjct: 234 GKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM-DDEGCGPD 292
Query: 219 VWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVME 278
V T + A ++D + ++K +T +P+ T+ LLD + D +
Sbjct: 293 VVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWS 352
Query: 279 YMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
M+K + +VT+ I++DA KAG+ + +MR +
Sbjct: 353 EMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ 392
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 10/236 (4%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+RP+ Y L+V LGK + + + L + M G + ++T + R+G + A+
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAY 278
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
+L+ M GC PDV TY++LI + D + + M KP+ VTY TL+D
Sbjct: 279 EILKRMDDE-GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAF---GNLGQ-IDTMERCYDKFQTA 248
+ + ++ EM D PDV T + A GN G+ DT+ D +
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHV-PDVVTFTILVDALCKAGNFGEAFDTL----DVMRDQ 392
Query: 249 GIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
GI PN+ T+N L+ + H + M+ T TY + ID +GK+GD
Sbjct: 393 GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 130/299 (43%), Gaps = 40/299 (13%)
Query: 53 TALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDC 112
TA + + A +VFE ++ ++P+ YI L+ + + + + M +G V D
Sbjct: 305 TARKLDCAKEVFEKMKTG-RHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
++T L+ A ++G AF L+ M+ G P++ TY+ LI L V D L
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQ-GILPNLHTYNTLICGLLRVHRLDDALELFG 422
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKA-KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
+M G+KP TY ID YGK+ S +E+ E + + P++ N++L +
Sbjct: 423 NMESLGVKPTAYTYIVFIDYYGKSGDSVSALET--FEKMKTKGIAPNIVACNASLYSLAK 480
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHD----YKKMSAVMEY-------- 279
G+ ++ + + G+ P+ T+N+++ Y K + K +S +ME
Sbjct: 481 AGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV 540
Query: 280 -----------------------MQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
M++ T+VTYN ++ GK G +Q+ LF M
Sbjct: 541 VNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM 599
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 3/227 (1%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYS-RSGLLERAFSLLEEMKSTPGCQPDVQTYS 152
+ A+ + +V G D +S + YS + + A +L E+ G QP + TY+
Sbjct: 730 DNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN 789
Query: 153 ILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLAD 212
+LI LE + Q + + G P+ TYN L+DAYGK+ + E+ EM +
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM-ST 848
Query: 213 RDCQPDVWTMNSTLRAFGNLGQID-TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYK 271
+C+ + T N + G +D ++ YD P T+ L+D K
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 272 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ + E M Y YNI+I+ FGKAG+ LF+ M E
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 4/263 (1%)
Query: 54 ALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE 113
A + A +++R+Q PN Y LI L + + + ALELF M G
Sbjct: 376 AGNFGEAFDTLDVMRDQ-GILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAY 434
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y + Y +SG A E+MK T G P++ + + S + + + +
Sbjct: 435 TYIVFIDYYGKSGDSVSALETFEKMK-TKGIAPNIVACNASLYSLAKAGRDREAKQIFYG 493
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
+ G+ P++VTYN ++ Y K E L EM+ + C+PDV +NS +
Sbjct: 494 LKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMM-ENGCEPDVIVVNSLINTLYKAD 552
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
++D + + + + ++P V T+N LL GK ++ + E M + +T+N
Sbjct: 553 RVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFN 612
Query: 294 IVIDAFGKAGDLQ-QMEYLFRLM 315
+ D K ++ ++ LF++M
Sbjct: 613 TLFDCLCKNDEVTLALKMLFKMM 635
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 117/260 (45%), Gaps = 2/260 (0%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMV-DEGCVVDCESYT 116
++A+ E L R + + +I K A LF+ D G +Y
Sbjct: 730 DNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYN 789
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
L+ + ++E A + ++KST GC PDV TY+ L+ + + D++ L +M+
Sbjct: 790 LLIGGLLEADMIEIAQDVFLQVKST-GCIPDVATYNFLLDAYGKSGKIDELFELYKEMST 848
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
H + NT+T+N +I KA + ++++DRD P T + G++
Sbjct: 849 HECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLY 908
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
++ ++ G +PN +NIL++ +GK + A+ + M K + TY++++
Sbjct: 909 EAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLV 968
Query: 297 DAFGKAGDLQQMEYLFRLMR 316
D G + + + F+ ++
Sbjct: 969 DCLCMVGRVDEGLHYFKELK 988
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 121/293 (41%), Gaps = 48/293 (16%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+ + A+++FE + ++ PN+ + L L K + AL++ M+D GCV D +Y
Sbjct: 588 KIQEAIELFEGMVQK-GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTY 646
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSIL----IKSCLEVFAFDKVQGLL 171
++ ++G ++ A +MK PD T L +K+ L A+ + L
Sbjct: 647 NTIIFGLVKNGQVKEAMCFFHQMKKL--VYPDFVTLCTLLPGVVKASLIEDAYKIITNFL 704
Query: 172 -----------------SDMAIHGIKPNTVTYNTLIDAYG-----------------KAK 197
S +A GI N V+++ + A G K
Sbjct: 705 YNCADQPANLFWEDLIGSILAEAGID-NAVSFSERLVANGICRDGDSILVPIIRYSCKHN 763
Query: 198 RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKF---QTAGIQPNV 254
S + + D QP + T N + G L + D +E D F ++ G P+V
Sbjct: 764 NVSGARTLFEKFTKDLGVQPKLPTYNLLI---GGLLEADMIEIAQDVFLQVKSTGCIPDV 820
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
T+N LLD+YGK ++ + + M + +T+NIVI KAG++
Sbjct: 821 ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 124/262 (47%), Gaps = 2/262 (0%)
Query: 54 ALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE 113
L ALKVF+++ +++ PNS Y LI L + + E+A L M ++GC
Sbjct: 243 GLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR 302
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+YT L+ A GL+++AF+L +EM GC+P+V TY++LI ++ G+
Sbjct: 303 TYTVLIKALCDRGLIDKAFNLFDEMIPR-GCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M I P+ +TYN LI+ Y K R L+ ++ R C+P+V T N + +G
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVP-AFELLTVMEKRACKPNVRTFNELMEGLCRVG 420
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
+ + G+ P++ ++N+L+D + ++ M + +T+
Sbjct: 421 KPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFT 480
Query: 294 IVIDAFGKAGDLQQMEYLFRLM 315
+I+AF K G LM
Sbjct: 481 AIINAFCKQGKADVASAFLGLM 502
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 116/242 (47%), Gaps = 10/242 (4%)
Query: 80 YIKLIVMLGKCK--QPEKALELFQAMVDE-GCVVDCESYTALLSAYSRSGLLERAFSLLE 136
+I ++LG C+ AL++F M E C + SY+ L+ G LE AF L +
Sbjct: 231 HIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKD 290
Query: 137 EMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKA 196
+M GCQP +TY++LIK+ + DK L +M G KPN TY LID +
Sbjct: 291 QM-GEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRD 349
Query: 197 KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQT 256
+ E +M+ DR P V T N+ + + G++ + +PNV+T
Sbjct: 350 GKIEEANGVCRKMVKDR-IFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408
Query: 257 FNILLDSYGK-GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
FN L++ + G YK + +++ M S IV+YN++ID + G M ++L+
Sbjct: 409 FNELMEGLCRVGKPYKAVH-LLKRMLDNGLSPDIVSYNVLIDGLCREG---HMNTAYKLL 464
Query: 316 RS 317
S
Sbjct: 465 SS 466
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 123/295 (41%), Gaps = 45/295 (15%)
Query: 62 KVFELLREQL--WYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
K F L E + +PN Y LI L + + E+A + + MV + +Y AL+
Sbjct: 319 KAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALI 378
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+ Y + G + AF LL M+ C+P+V+T++ L++ V K LL M +G+
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKR-ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC---QPDVWTMNSTLRAFGNLGQID 236
P+ V+YN LID + + T ++L+ +C +PD T + + AF G+ D
Sbjct: 438 SPDIVSYNVLIDGLCREGHMN----TAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 237 -------------------TMERCYDKFQTAG----------------IQPNVQTFNILL 261
T D G I + N++L
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553
Query: 262 DSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
D KG K+ A++ + K ++VTY ++D ++GD+ + LM+
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 98/222 (44%), Gaps = 2/222 (0%)
Query: 95 KALELFQA-MVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+A E+F + ++ G V+D T+LL + R L A + + M C P+ +YSI
Sbjct: 212 EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSI 271
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
LI EV ++ GL M G +P+T TY LI A + + EM+ R
Sbjct: 272 LIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIP-R 330
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
C+P+V T + G+I+ K I P+V T+N L++ Y K
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
++ M+K + T+N +++ + G + +L + M
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 106/255 (41%), Gaps = 4/255 (1%)
Query: 64 FELLR--EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSA 121
FELL E+ +PN + +L+ L + +P KA+ L + M+D G D SY L+
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDG 450
Query: 122 YSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKP 181
R G + A+ LL M +PD T++ +I + + D L M GI
Sbjct: 451 LCREGHMNTAYKLLSSMNCFD-IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 182 NTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERC 241
+ VT TLID K + + L E L ++N L ++
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFIL-ETLVKMRILTTPHSLNVILDMLSKGCKVKEELAM 568
Query: 242 YDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
K G+ P+V T+ L+D + D ++E M+ + Y I+I+ +
Sbjct: 569 LGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQ 628
Query: 302 AGDLQQMEYLFRLMR 316
G +++ E L M+
Sbjct: 629 FGRVEEAEKLLSAMQ 643
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 9/158 (5%)
Query: 56 RWESALKVFE-LLREQLWYRPNSGVYIKLIV-MLGKCKQPEKALELFQAMVDEGCVVDCE 113
+ AL + E L++ ++ P+S + +I+ ML K + ++ L + + G V
Sbjct: 526 KTRDALFILETLVKMRILTTPHS---LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVV 582
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+YT L+ RSG + +F +LE MK + GC P+V Y+I+I + ++ + LLS
Sbjct: 583 TYTTLVDGLIRSGDITGSFRILELMKLS-GCLPNVYPYTIIINGLCQFGRVEEAEKLLSA 641
Query: 174 MAIHGIKPNTVTYNTLIDAY---GKAKRFSEMESTLVE 208
M G+ PN VTY ++ Y GK R E +VE
Sbjct: 642 MQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE 679
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 124/262 (47%), Gaps = 6/262 (2%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCK--QPEKALELFQAMVDEGCVVDCE 113
R E A+K+F+ E L ++ + I++ G C + EKALEL M GC D
Sbjct: 186 RVEDAMKLFD---EHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIV 242
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y L+ + +S L +A + +++KS C PDV TY+ +I + + LL D
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M GI P VT+N L+D Y KA E +M++ C PDV T S + + +G
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS-FGCFPDVVTFTSLIDGYCRVG 361
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
Q+ R +++ G+ PN T++IL+++ + K ++ + YN
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 294 IVIDAFGKAGDLQQMEYLFRLM 315
VID F KAG + + + M
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEM 443
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Query: 99 LFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSC 158
L Q+ EGC C +LL+ + +E A L +E C D +T++ILI+
Sbjct: 161 LLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGL 216
Query: 159 LEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
V +K LL M+ G +P+ VTYNTLI + K+ ++ ++ + C PD
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 219 VWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVME 278
V T S + + G++ D GI P TFN+L+D Y K + +
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 279 YMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
M + +VT+ +ID + + G + Q
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 5/235 (2%)
Query: 27 KRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVM 86
K K G + S ++ T + + + + +R S+L + ++LR ++ P + + L+
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL-LDDMLRLGIY--PTNVTFNVLVDG 321
Query: 87 LGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
K + A E+ M+ GC D ++T+L+ Y R G + + F L EEM + G P
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFP 380
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
+ TYSILI + K + LL +A I P YN +ID + KA + +E + +
Sbjct: 381 NAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE-ANVI 439
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
VE + + C+PD T + G++ + K G P+ T + LL
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/262 (29%), Positives = 124/262 (47%), Gaps = 6/262 (2%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCK--QPEKALELFQAMVDEGCVVDCE 113
R E A+K+F+ E L ++ + I++ G C + EKALEL M GC D
Sbjct: 186 RVEDAMKLFD---EHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIV 242
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y L+ + +S L +A + +++KS C PDV TY+ +I + + LL D
Sbjct: 243 TYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDD 302
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M GI P VT+N L+D Y KA E +M++ C PDV T S + + +G
Sbjct: 303 MLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS-FGCFPDVVTFTSLIDGYCRVG 361
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
Q+ R +++ G+ PN T++IL+++ + K ++ + YN
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYN 421
Query: 294 IVIDAFGKAGDLQQMEYLFRLM 315
VID F KAG + + + M
Sbjct: 422 PVIDGFCKAGKVNEANVIVEEM 443
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 4/209 (1%)
Query: 99 LFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSC 158
L Q+ EGC C +LL+ + +E A L +E C D +T++ILI+
Sbjct: 161 LLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCN-DTKTFNILIRGL 216
Query: 159 LEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
V +K LL M+ G +P+ VTYNTLI + K+ ++ ++ + C PD
Sbjct: 217 CGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
Query: 219 VWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVME 278
V T S + + G++ D GI P TFN+L+D Y K + +
Sbjct: 277 VVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRG 336
Query: 279 YMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
M + +VT+ +ID + + G + Q
Sbjct: 337 KMISFGCFPDVVTFTSLIDGYCRVGQVSQ 365
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 109/235 (46%), Gaps = 5/235 (2%)
Query: 27 KRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVM 86
K K G + S ++ T + + + + +R S+L + ++LR ++ P + + L+
Sbjct: 265 KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSL-LDDMLRLGIY--PTNVTFNVLVDG 321
Query: 87 LGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
K + A E+ M+ GC D ++T+L+ Y R G + + F L EEM + G P
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMFP 380
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
+ TYSILI + K + LL +A I P YN +ID + KA + +E + +
Sbjct: 381 NAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNE-ANVI 439
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
VE + + C+PD T + G++ + K G P+ T + LL
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 122/254 (48%), Gaps = 7/254 (2%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
+ A +VFE ++ + + Y L+ + GK +P++A+++ MV G +Y +
Sbjct: 296 QEAAQVFEEMKAA-GFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNS 354
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+SAY+R G+L+ A L +M + G +PDV TY+ L+ + + +M
Sbjct: 355 LISAYARDGMLDEAMELKNQM-AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC--QPDVWTMNSTLRAFGNLGQI 235
G KPN T+N I YG +F+EM E+ C PD+ T N+ L FG G
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV---CGLSPDIVTWNTLLAVFGQNGMD 470
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+ + + + AG P +TFN L+ +Y + +++ V M + + TYN V
Sbjct: 471 SEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTV 530
Query: 296 IDAFGKAGDLQQME 309
+ A + G +Q E
Sbjct: 531 LAALARGGMWEQSE 544
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 122/241 (50%), Gaps = 2/241 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P++ Y LI + ++A ++F+ M G D +Y ALL Y +S + A +
Sbjct: 277 PDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKV 336
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L EM G P + TY+ LI + D+ L + MA G KP+ TY TL+ +
Sbjct: 337 LNEMVLN-GFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFE 395
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+A + E ++ E + + C+P++ T N+ ++ +GN G+ M + +D+ G+ P++
Sbjct: 396 RAGKV-ESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDI 454
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
T+N LL +G+ ++S V + M++ + T+N +I A+ + G +Q ++R
Sbjct: 455 VTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRR 514
Query: 315 M 315
M
Sbjct: 515 M 515
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 151/336 (44%), Gaps = 79/336 (23%)
Query: 56 RWESALKVFELLREQLWYRP---NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDC 112
+++ AL+ F+ +Q Y+ NS V I +I MLGK + A +F + ++G +D
Sbjct: 150 KFDLALRAFDWFMKQKDYQSMLDNSVVAI-IISMLGKEGRVSSAANMFNGLQEDGFSLDV 208
Query: 113 ESYTALLSAYSRSGLLERAF------------------------------------SLLE 136
SYT+L+SA++ SG A SL+E
Sbjct: 209 YSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVE 268
Query: 137 EMKSTPGCQPDVQTYSILIKSC-----------------LEVFAFDKVQ----------- 168
+MKS G PD TY+ LI C F++DKV
Sbjct: 269 KMKSD-GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 169 -------GLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE-MESTLVEMLADRDCQPDVW 220
+L++M ++G P+ VTYN+LI AY + E ME L +A++ +PDV+
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAME--LKNQMAEKGTKPDVF 385
Query: 221 TMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYM 280
T + L F G++++ +++ + AG +PN+ TFN + YG + +M + + +
Sbjct: 386 TYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI 445
Query: 281 QKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
S IVT+N ++ FG+ G ++ +F+ M+
Sbjct: 446 NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 481
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 116/249 (46%), Gaps = 10/249 (4%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ P + LI +C E+A+ +++ M+D G D +Y +L+A +R G+ E++
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA--IHG--IKPNTVTYNT 188
+L EM+ C+P+ TY S L +A K GL+ +A ++ I+P V T
Sbjct: 545 KVLAEMEDG-RCKPNELTYC----SLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKT 599
Query: 189 LIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA 248
L+ K E E E L +R PD+ T+NS + +G + D +
Sbjct: 600 LVLVCSKCDLLPEAERAFSE-LKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKER 658
Query: 249 GIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQM 308
G P++ T+N L+ + + D+ K ++ + I++YN VI A+ + ++
Sbjct: 659 GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDA 718
Query: 309 EYLFRLMRS 317
+F MR+
Sbjct: 719 SRIFSEMRN 727
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 20/266 (7%)
Query: 43 TVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQ----PEKALE 98
TVL AL WE + KV + E +PN Y L+ K+ A E
Sbjct: 529 TVLAAL---ARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Query: 99 LFQAMVDEGCVVDCESYTALLSAYSRSGLL---ERAFSLLEEMKSTPGCQPDVQTYSILI 155
++ +++ V+ L+ S+ LL ERAFS L+E G PD+ T + ++
Sbjct: 585 VYSGVIEPRAVL----LKTLVLVCSKCDLLPEAERAFSELKER----GFSPDITTLNSMV 636
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
K G+L M G P+ TYN+L+ + ++ F + E L E+LA +
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILA-KGI 695
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
+PD+ + N+ + A+ ++ R + + + +GI P+V T+N + SY +++
Sbjct: 696 KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIG 755
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGK 301
V+ YM K+ TYN ++D + K
Sbjct: 756 VVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 3/155 (1%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A V + ++E+ + P+ Y L+ M + K+ E+ + ++ +G D SY ++
Sbjct: 648 ANGVLDYMKER-GFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
AY R+ + A + EM+++ G PDV TY+ I S F++ G++ M HG
Sbjct: 707 YAYCRNTRMRDASRIFSEMRNS-GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGC 765
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
+PN TYN+++D Y K R E + VE L + D
Sbjct: 766 RPNQNTYNSIVDGYCKLNRKDEAK-LFVEDLRNLD 799
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 2/259 (0%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
+ +AL F L+ Q ++ + Y ++ LG+ KQ + +L MV +GC + +Y
Sbjct: 339 YANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYN 398
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
L+ +Y R+ L+ A ++ +M+ GC+PD TY LI + D + M
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEA-GCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQE 457
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
G+ P+T TY+ +I+ GKA EM+ + C P++ T N + +
Sbjct: 458 AGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVG-QGCTPNLVTFNIMIALHAKARNYE 516
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
T + Y Q AG QP+ T++I+++ G ++ V MQ+ ++ Y +++
Sbjct: 517 TALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLV 576
Query: 297 DAFGKAGDLQQMEYLFRLM 315
D +GKAG++ + ++ M
Sbjct: 577 DLWGKAGNVDKAWQWYQAM 595
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 2/206 (0%)
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
D +YT ++ R+ LL+EM GC+P+ TY+ LI S + +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRD-GCKPNTVTYNRLIHSYGRANYLKEAMNV 416
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
+ M G +P+ VTY TLID + KA F ++ + + + + PD +T + + G
Sbjct: 417 FNQMQEAGCEPDRVTYCTLIDIHAKAG-FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLG 475
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
G + R + + G PN+ TFNI++ + K +Y+ + MQ + V
Sbjct: 476 KAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKV 535
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLMR 316
TY+IV++ G G L++ E +F M+
Sbjct: 536 TYSIVMEVLGHCGFLEEAEGVFAEMQ 561
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 124/277 (44%), Gaps = 5/277 (1%)
Query: 41 PRTVL--EALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALE 98
P TV +H A + A+ VF ++E P+ Y LI + K + A++
Sbjct: 392 PNTVTYNRLIHSYGRANYLKEAMNVFNQMQEA-GCEPDRVTYCTLIDIHAKAGFLDIAMD 450
Query: 99 LFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSC 158
++Q M + G D +Y+ +++ ++G L A L EM GC P++ T++I+I
Sbjct: 451 MYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQ-GCTPNLVTFNIMIALH 509
Query: 159 LEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
+ ++ L DM G +P+ VTY+ +++ G E E EM ++ PD
Sbjct: 510 AKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM-QRKNWVPD 568
Query: 219 VWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVME 278
+ +G G +D + Y AG++PNV T N LL ++ + H + +++
Sbjct: 569 EPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQ 628
Query: 279 YMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
M ++ TY +++ A M + +LM
Sbjct: 629 SMLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLM 665
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 119/247 (48%), Gaps = 3/247 (1%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ P VY LI L K + A EL + MV++G + SY+ L++ SG +E AF
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSC-LEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLID 191
S L +M GC P++ T S L+K C L FD + + G++PN V YNTL+
Sbjct: 302 SFLTQMLKR-GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQ 360
Query: 192 AYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQ 251
+ + S M + C P++ T S + F G +D ++K T+G
Sbjct: 361 GFCSHGNIVKAVSVFSHM-EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC 419
Query: 252 PNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
PNV + ++++ + +K+ +++E M K + + ++ T+N I AG L E +
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 312 FRLMRSE 318
FR M +
Sbjct: 480 FRQMEQQ 486
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 120/268 (44%), Gaps = 14/268 (5%)
Query: 52 VTALRWES----ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEG 107
V LR ES AL F+ + ++ + +I L Q + L Q M +G
Sbjct: 47 VKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQG 106
Query: 108 CVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKV 167
+ + +++S Y + GL ERA + +K GC P V+ Y+ ++ + L +
Sbjct: 107 FHCSEDLFISVISVYRQVGLAERAVEMFYRIKEF-GCDPSVKIYNHVLDTLLGENRIQMI 165
Query: 168 QGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLR 227
+ DM G +PN TYN L+ A K + + LVEM +++ C PD + + +
Sbjct: 166 YMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM-SNKGCCPDAVSYTTVIS 224
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW 287
+ +G + ++F +P V +N L++ K HDYK +M M + S
Sbjct: 225 SMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISP 279
Query: 288 TIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+++Y+ +I+ +G Q+E F +
Sbjct: 280 NVISYSTLINVLCNSG---QIELAFSFL 304
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 109/260 (41%), Gaps = 10/260 (3%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
W ++ F L +PN Y L+ KA+ +F M + GC + +Y
Sbjct: 339 WNQMIRGFGL-------QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYG 391
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
+L++ +++ G L+ A + +M T GC P+V Y+ ++++ F + + L+ M+
Sbjct: 392 SLINGFAKRGSLDGAVYIWNKML-TSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSK 450
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
P+ T+N I A R E +M C P++ T N L +I+
Sbjct: 451 ENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIE 510
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLD-SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+ G++ + T+N LL S G + V + M S +T N++
Sbjct: 511 EAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGK-SPDEITMNMI 569
Query: 296 IDAFGKAGDLQQMEYLFRLM 315
I A+ K G ++ + L+
Sbjct: 570 ILAYCKQGKAERAAQMLDLV 589
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN VY ++ L + + ++A L + M E C ++ A + +G L+ A +
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+M+ C P++ TY+ L+ + ++ GL ++ + G++ ++ TYNTL+
Sbjct: 480 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 539
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA--GIQP 252
A + +M+ D PD TMN + A+ G+ + + D +P
Sbjct: 540 NAGLPGIALQLVGKMMVDGK-SPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRP 598
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
+V ++ ++ + + + ++E M +I T++++I+ F
Sbjct: 599 DVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 125/255 (49%), Gaps = 3/255 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E +FE ++ + + P++ Y LI L K + ELF +M ++GCV+D +Y
Sbjct: 534 EKGRAMFEEIKAR-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
++ + + G + +A+ LLEEMK T G +P V TY +I ++ D+ L +
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMK-TKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
I+ N V Y++LID +GK R E ++E L + P+++T NS L A +I+
Sbjct: 652 RIELNVVIYSSLIDGFGKVGRIDE-AYLILEELMQKGLTPNLYTWNSLLDALVKAEEINE 710
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
C+ + PN T+ IL++ K + K + MQK + ++Y +I
Sbjct: 711 ALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMIS 770
Query: 298 AFGKAGDLQQMEYLF 312
KAG++ + LF
Sbjct: 771 GLAKAGNIAEAGALF 785
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 4/263 (1%)
Query: 43 TVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQA 102
T +E + V A + V +++R + +RP Y LI + L LFQ
Sbjct: 135 TCIEMVLGCVKANKLREGYDVVQMMR-KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQ 193
Query: 103 MVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVF 162
M + G +T L+ +++ G ++ A SLL+EMKS+ D+ Y++ I S +V
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS-SLDADIVLYNVCIDSFGKVG 252
Query: 163 AFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTM 222
D ++ +G+KP+ VTY ++I KA R E + +R P +
Sbjct: 253 KVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRV-PCTYAY 311
Query: 223 NSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQK 282
N+ + +G+ G+ D ++ + G P+V +N +L K + V E M+K
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 283 YHYSWTIVTYNIVIDAFGKAGDL 305
+ + TYNI+ID +AG L
Sbjct: 372 -DAAPNLSTYNILIDMLCRAGKL 393
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 113/244 (46%), Gaps = 3/244 (1%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y ++ L K + ++AL++F+ M + + +Y L+ R+G L+ AF L
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA-APNLSTYNILIDMLCRAGKLDTAFEL 399
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+ M+ G P+V+T +I++ + D+ + +M P+ +T+ +LID G
Sbjct: 400 RDSMQKA-GLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
K R + +ML D DC+ + S ++ F N G+ + + Y P++
Sbjct: 459 KVGRVDDAYKVYEKML-DSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
Q N +D K + +K A+ E ++ + +Y+I+I KAG + LF
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 315 MRSE 318
M+ +
Sbjct: 578 MKEQ 581
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 125/261 (47%), Gaps = 3/261 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R + A KV+E + + R NS VY LI + E ++++ M+++ C D +
Sbjct: 462 RVDDAYKVYEKMLDSDC-RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLL 520
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
+ ++G E+ ++ EE+K+ PD ++YSILI ++ ++ L M
Sbjct: 521 NTYMDCMFKAGEPEKGRAMFEEIKARRFV-PDARSYSILIHGLIKAGFANETYELFYSMK 579
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G +T YN +ID + K + ++ L EM + +P V T S + + ++
Sbjct: 580 EQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM-KTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
D +++ ++ I+ NV ++ L+D +GK + ++E + + + + T+N +
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSL 698
Query: 296 IDAFGKAGDLQQMEYLFRLMR 316
+DA KA ++ + F+ M+
Sbjct: 699 LDALVKAEEINEALVCFQSMK 719
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 137/335 (40%), Gaps = 51/335 (15%)
Query: 23 AIIDKRRKKGPINSKKLLPRTVLEALHERVTALR----WESALKVFELLREQLWYRPNSG 78
++++++R KG I P + A + +T LR + ALKVFE +++ PN
Sbjct: 329 SLLERQRAKGSI------PSVI--AYNCILTCLRKMGKVDEALKVFEEMKKDA--APNLS 378
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
Y LI ML + + + A EL +M G + + ++ +S L+ A ++ EEM
Sbjct: 379 TYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
C PD T+ LI +V D + M + N++ Y +LI + R
Sbjct: 439 DYKV-CTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF- 257
+ +M+ +++C PD+ +N+ + G+ + +++ + P+ +++
Sbjct: 498 KEDGHKIYKDMI-NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYS 556
Query: 258 ----------------------------------NILLDSYGKGHDYKKMSAVMEYMQKY 283
NI++D + K K ++E M+
Sbjct: 557 ILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK 616
Query: 284 HYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ T+VTY VID K L + LF +S+
Sbjct: 617 GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK 651
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 4/172 (2%)
Query: 132 FSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLID 191
F E P C + +++ C FD + +L +M++ G P+ T ++
Sbjct: 85 FRWYERRTELPHCPESYNSLLLVMARCRN---FDALDQILGEMSVAGFGPSVNTCIEMVL 141
Query: 192 AYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQ 251
KA + E +V+M+ +P + + AF + D M + + Q G +
Sbjct: 142 GCVKANKLRE-GYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYE 200
Query: 252 PNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
P V F L+ + K ++++ M+ IV YN+ ID+FGK G
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVG 252
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 120/244 (49%), Gaps = 5/244 (2%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCES-YTALLSAYSRSGLLERAFS 133
P++ Y LI K + + A+ LF M D C+ E YT LL Y + G +E+A
Sbjct: 231 PDTITYSALISSYEKLGRNDSAIRLFDEMKD-NCMQPTEKIYTTLLGIYFKVGKVEKALD 289
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L EEMK GC P V TY+ LIK + D+ G DM G+ P+ V N L++
Sbjct: 290 LFEEMKRA-GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNIL 348
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRA-FGNLGQIDTMERCYDKFQTAGIQP 252
GK R E+ + EM R C P V + N+ ++A F + + + +DK + + P
Sbjct: 349 GKVGRVEELTNVFSEMGMWR-CTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSP 407
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+ T++IL+D Y K + +K ++E M + + Y +I+A GKA + LF
Sbjct: 408 SEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELF 467
Query: 313 RLMR 316
+ ++
Sbjct: 468 KELK 471
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 97/179 (54%), Gaps = 3/179 (1%)
Query: 54 ALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE 113
A R+E+A ++F+ L+E +S VY +I GKC + +A++LF M ++G D
Sbjct: 457 AKRYEAANELFKELKENFG-NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVY 515
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y AL+S ++G++ A SLL +M+ GC+ D+ +++I++ + +
Sbjct: 516 AYNALMSGMVKAGMINEANSLLRKMEEN-GCRADINSHNIILNGFARTGVPRRAIEMFET 574
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
+ GIKP+ VTYNTL+ + A F E + EM D+ + D T +S L A GN+
Sbjct: 575 IKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM-KDKGFEYDAITYSSILDAVGNV 632
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 130/264 (49%), Gaps = 4/264 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R +SA+++F+ +++ +P +Y L+ + K + EKAL+LF+ M GC +Y
Sbjct: 248 RNDSAIRLFDEMKDNCM-QPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTY 306
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
T L+ ++G ++ A+ ++M G PDV + L+ +V +++ + S+M
Sbjct: 307 TELIKGLGKAGRVDEAYGFYKDMLRD-GLTPDVVFLNNLMNILGKVGRVEELTNVFSEMG 365
Query: 176 IHGIKPNTVTYNTLIDAYGKAK-RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
+ P V+YNT+I A ++K SE+ S +M AD P +T + + + +
Sbjct: 366 MWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD-SVSPSEFTYSILIDGYCKTNR 424
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNI 294
++ ++ G P + L+++ GK Y+ + + + +++ + + Y +
Sbjct: 425 VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAV 484
Query: 295 VIDAFGKAGDLQQMEYLFRLMRSE 318
+I FGK G L + LF M+++
Sbjct: 485 MIKHFGKCGKLSEAVDLFNEMKNQ 508
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 2/242 (0%)
Query: 78 GVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEE 137
V +L+ LG+ K KAL +F C +Y +++ + G E+ + E
Sbjct: 163 AVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTE 222
Query: 138 MKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAK 197
M + C PD TYS LI S ++ D L +M + ++P Y TL+ Y K
Sbjct: 223 MCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVG 282
Query: 198 RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF 257
+ E L E + C P V+T ++ G G++D Y G+ P+V
Sbjct: 283 KV-EKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFL 341
Query: 258 NILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA-FGKAGDLQQMEYLFRLMR 316
N L++ GK ++++ V M + + T+V+YN VI A F + ++ F M+
Sbjct: 342 NNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMK 401
Query: 317 SE 318
++
Sbjct: 402 AD 403
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 2/226 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y LI K + EKAL L + M ++G +Y +L++A ++ E A L
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+E+K G + Y+++IK + + L ++M G P+ YN L+
Sbjct: 467 FKELKENFG-NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMV 525
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
KA +E S L +M + C+ D+ + N L F G ++ + +GI+P+
Sbjct: 526 KAGMINEANSLLRKM-EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDG 584
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 300
T+N LL + +++ + +M M+ + + +TY+ ++DA G
Sbjct: 585 VTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVG 630
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 119/282 (42%), Gaps = 39/282 (13%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E AL +FE ++ + P Y +LI LGK + ++A ++ M+ +G D
Sbjct: 285 EKALDLFEEMK-RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNN 343
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFA--------FDKVQG 169
L++ + G +E ++ EM C P V +Y+ +IK+ E A FDK++
Sbjct: 344 LMNILGKVGRVEELTNVFSEM-GMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 170 ----------------------------LLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
LL +M G P Y +LI+A GKAKR+ E
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY-E 461
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
+ L + L + ++ FG G++ +++ + G P+V +N L+
Sbjct: 462 AANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALM 521
Query: 262 DSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
K + ++++ M++ I ++NI+++ F + G
Sbjct: 522 SGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTG 563
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%)
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
DC +Y L+ + L + ++E+ S L+K+ K +
Sbjct: 125 DCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSV 184
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
KP + TYN++I + + ++ EM + DC PD T ++ + ++
Sbjct: 185 FYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYE 244
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
LG+ D+ R +D+ + +QP + + LL Y K +K + E M++ S T+
Sbjct: 245 KLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVY 304
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLM 315
TY +I GKAG + + ++ M
Sbjct: 305 TYTELIKGLGKAGRVDEAYGFYKDM 329
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 2/259 (0%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
+ +AL F L+ Q ++ + Y ++ LG+ KQ +L MV +GC + +Y
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 403
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
L+ +Y R+ L A ++ +M+ GC+PD TY LI + D + M
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
G+ P+T TY+ +I+ GKA EM+ D+ C P++ T N +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ Y Q AG +P+ T++I+++ G ++ AV MQ+ ++ Y +++
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 297 DAFGKAGDLQQMEYLFRLM 315
D +GKAG++++ ++ M
Sbjct: 582 DLWGKAGNVEKAWQWYQAM 600
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 2/206 (0%)
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
D +YT ++ R+ LL+EM GCQP+ TY+ LI S ++ +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNV 421
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
+ M G KP+ VTY TLID + KA F ++ + + + PD +T + + G
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAG-FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
G + + + + G PN+ T+NI++D + K +Y+ + MQ + V
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV 540
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLMR 316
TY+IV++ G G L++ E +F M+
Sbjct: 541 TYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Query: 131 AFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLI 190
A +K PG + D TY+ ++ + F + LL +M G +PNTVTYN LI
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 191 DAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
+YG+A +E + +M + C+PD T + + G +D Y + Q G+
Sbjct: 407 HSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEY 310
P+ T++++++ GK + M + +VTYNI++D KA + Q
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 311 LFRLMRS 317
L+R M++
Sbjct: 526 LYRDMQN 532
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 120/288 (41%), Gaps = 39/288 (13%)
Query: 65 ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSR 124
E++R+ +PN+ Y +LI G+ +A+ +F M + GC D +Y L+ +++
Sbjct: 389 EMVRDGC--QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAK 446
Query: 125 SGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTV 184
+G L+ A + + M++ G PD TYS++I + L +M G PN V
Sbjct: 447 AGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 185 TYNTLIDAYGKAKRFS-----------------------------------EMESTLVEM 209
TYN ++D + KA+ + E E+ EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 210 LADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHD 269
++ PD + +G G ++ + Y AG++PNV T N LL ++ + +
Sbjct: 566 -QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 270 YKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+ +++ M ++ TY +++ M + +LM S
Sbjct: 625 IAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMAS 672
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E A VF ++++ W P+ VY L+ + GK EKA + +QAM+ G + + +
Sbjct: 556 EEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLE 160
LLS + R + A+ LL+ M + G +P +QTY++L+ C +
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLAL-GLRPSLQTYTLLLSCCTD 656
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 130/255 (50%), Gaps = 3/255 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E A+ VF+ ++ +P + Y +I + GK + + +L+ M C + +YTA
Sbjct: 246 EEAIDVFQRMKRDRC-KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTA 304
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L++A++R GL E+A + E+++ G +PDV Y+ L++S + S M
Sbjct: 305 LVNAFAREGLCEKAEEIFEQLQED-GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 363
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G +P+ +YN ++DAYG+A S+ E+ EM P + + L A+ +
Sbjct: 364 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM-KRLGIAPTMKSHMLLLSAYSKARDVTK 422
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
E + G++P+ N +L+ YG+ + KM ++ M+ + I TYNI+I+
Sbjct: 423 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 482
Query: 298 AFGKAGDLQQMEYLF 312
+GKAG L+++E LF
Sbjct: 483 IYGKAGFLERIEELF 497
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 120/231 (51%), Gaps = 8/231 (3%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERA-- 131
+PN Y L+ + EKA E+F+ + ++G D Y AL+ +YSR+G A
Sbjct: 296 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 355
Query: 132 -FSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLI 190
FSL++ M GC+PD +Y+I++ + + + +M GI P ++ L+
Sbjct: 356 IFSLMQHM----GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 411
Query: 191 DAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
AY KA+ ++ E+ + EM ++ +PD + +NS L +G LGQ ME+ + +
Sbjct: 412 SAYSKARDVTKCEAIVKEM-SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPC 470
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
++ T+NIL++ YGK +++ + +++ ++ +VT+ I A+ +
Sbjct: 471 TADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 521
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 136/270 (50%), Gaps = 16/270 (5%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+W+S + V E + + ++P+ + LI G+ Q ++A L+ +++ V ++Y
Sbjct: 134 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTY 193
Query: 116 TALLSAYSRSGLLERAFSLLEEMKS---TPGCQPDVQTYSILIKSCLE-----VFAFDKV 167
L+ AY +GL+ERA +L EM++ +P V Y+ I+ ++ A D
Sbjct: 194 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPK-TIGVTVYNAYIEGLMKRKGNTEEAIDVF 252
Query: 168 QGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLR 227
Q + D KP T TYN +I+ YGKA + S M L + C+P++ T + +
Sbjct: 253 QRMKRDRC----KPTTETYNLMINLYGKASK-SYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK-GHDYKKMSAVMEYMQKYHYS 286
AF G + E +++ Q G++P+V +N L++SY + G+ Y + + MQ
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGA-AEIFSLMQHMGCE 366
Query: 287 WTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+YNI++DA+G+AG E +F M+
Sbjct: 367 PDRASYNIMVDAYGRAGLHSDAEAVFEEMK 396
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A VFE ++ +L P ++ L+ K + K + + M + G D ++L
Sbjct: 388 AEAVFEEMK-RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 446
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+ Y R G + +L EM++ P C D+ TY+ILI + ++++ L ++
Sbjct: 447 NLYGRLGQFTKMEKILAEMENGP-CTADISTYNILINIYGKAGFLERIEELFVELKEKNF 505
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
+P+ VT+ + I AY + K + + EM+ D C PD T L A + Q++
Sbjct: 506 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI-DSGCAPDGGTAKVLLSACSSEEQVE 561
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 9/180 (5%)
Query: 145 QPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMES 204
QPDV +++LI + + F + + + L + P TY LI AY A E
Sbjct: 152 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 211
Query: 205 TLVEMLADRDCQP---DVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG---IQPNVQTFN 258
LVEM + P V N+ + G + + E D FQ +P +T+N
Sbjct: 212 VLVEM-QNHHVSPKTIGVTVYNAYIE--GLMKRKGNTEEAIDVFQRMKRDRCKPTTETYN 268
Query: 259 ILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
++++ YGK + M+ + I TY +++AF + G ++ E +F ++ +
Sbjct: 269 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 328
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 2/259 (0%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
+ +AL F L+ Q ++ + Y ++ LG+ KQ +L MV +GC + +Y
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 403
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
L+ +Y R+ L A ++ +M+ GC+PD TY LI + D + M
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
G+ P+T TY+ +I+ GKA EM+ D+ C P++ T N +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ Y Q AG +P+ T++I+++ G ++ AV MQ+ ++ Y +++
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 297 DAFGKAGDLQQMEYLFRLM 315
D +GKAG++++ ++ M
Sbjct: 582 DLWGKAGNVEKAWQWYQAM 600
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 2/206 (0%)
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
D +YT ++ R+ LL+EM GCQP+ TY+ LI S ++ +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNV 421
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
+ M G KP+ VTY TLID + KA F ++ + + + PD +T + + G
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAG-FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
G + + + + G PN+ T+NI++D + K +Y+ + MQ + V
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV 540
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLMR 316
TY+IV++ G G L++ E +F M+
Sbjct: 541 TYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Query: 131 AFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLI 190
A +K PG + D TY+ ++ + F + LL +M G +PNTVTYN LI
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 191 DAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
+YG+A +E + +M + C+PD T + + G +D Y + Q G+
Sbjct: 407 HSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEY 310
P+ T++++++ GK + M + +VTYNI++D KA + Q
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 311 LFRLMRS 317
L+R M++
Sbjct: 526 LYRDMQN 532
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 120/288 (41%), Gaps = 39/288 (13%)
Query: 65 ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSR 124
E++R+ +PN+ Y +LI G+ +A+ +F M + GC D +Y L+ +++
Sbjct: 389 EMVRDGC--QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAK 446
Query: 125 SGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTV 184
+G L+ A + + M++ G PD TYS++I + L +M G PN V
Sbjct: 447 AGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 185 TYNTLIDAYGKAKRFS-----------------------------------EMESTLVEM 209
TYN ++D + KA+ + E E+ EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 210 LADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHD 269
++ PD + +G G ++ + Y AG++PNV T N LL ++ + +
Sbjct: 566 -QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 270 YKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+ +++ M ++ TY +++ M + +LM S
Sbjct: 625 IAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMAS 672
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E A VF ++++ W P+ VY L+ + GK EKA + +QAM+ G + + +
Sbjct: 556 EEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLE 160
LLS + R + A+ LL+ M + G +P +QTY++L+ C +
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLAL-GLRPSLQTYTLLLSCCTD 656
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 123/259 (47%), Gaps = 2/259 (0%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
+ +AL F L+ Q ++ + Y ++ LG+ KQ +L MV +GC + +Y
Sbjct: 344 YGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYN 403
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
L+ +Y R+ L A ++ +M+ GC+PD TY LI + D + M
Sbjct: 404 RLIHSYGRANYLNEAMNVFNQMQEA-GCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQA 462
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
G+ P+T TY+ +I+ GKA EM+ D+ C P++ T N +
Sbjct: 463 GGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMV-DQGCTPNLVTYNIMMDLHAKARNYQ 521
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ Y Q AG +P+ T++I+++ G ++ AV MQ+ ++ Y +++
Sbjct: 522 NALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLV 581
Query: 297 DAFGKAGDLQQMEYLFRLM 315
D +GKAG++++ ++ M
Sbjct: 582 DLWGKAGNVEKAWQWYQAM 600
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 2/206 (0%)
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
D +YT ++ R+ LL+EM GCQP+ TY+ LI S ++ +
Sbjct: 363 DGHTYTTMVGNLGRAKQFGAINKLLDEMVRD-GCQPNTVTYNRLIHSYGRANYLNEAMNV 421
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
+ M G KP+ VTY TLID + KA F ++ + + + PD +T + + G
Sbjct: 422 FNQMQEAGCKPDRVTYCTLIDIHAKAG-FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
G + + + + G PN+ T+NI++D + K +Y+ + MQ + V
Sbjct: 481 KAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKV 540
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLMR 316
TY+IV++ G G L++ E +F M+
Sbjct: 541 TYSIVMEVLGHCGYLEEAEAVFTEMQ 566
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Query: 131 AFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLI 190
A +K PG + D TY+ ++ + F + LL +M G +PNTVTYN LI
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 191 DAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
+YG+A +E + +M + C+PD T + + G +D Y + Q G+
Sbjct: 407 HSYGRANYLNEAMNVFNQM-QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEY 310
P+ T++++++ GK + M + +VTYNI++D KA + Q
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALK 525
Query: 311 LFRLMRS 317
L+R M++
Sbjct: 526 LYRDMQN 532
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 120/288 (41%), Gaps = 39/288 (13%)
Query: 65 ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSR 124
E++R+ +PN+ Y +LI G+ +A+ +F M + GC D +Y L+ +++
Sbjct: 389 EMVRDGC--QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAK 446
Query: 125 SGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTV 184
+G L+ A + + M++ G PD TYS++I + L +M G PN V
Sbjct: 447 AGFLDIAMDMYQRMQAG-GLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLV 505
Query: 185 TYNTLIDAYGKAKRFS-----------------------------------EMESTLVEM 209
TYN ++D + KA+ + E E+ EM
Sbjct: 506 TYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM 565
Query: 210 LADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHD 269
++ PD + +G G ++ + Y AG++PNV T N LL ++ + +
Sbjct: 566 -QQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNK 624
Query: 270 YKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+ +++ M ++ TY +++ M + +LM S
Sbjct: 625 IAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMAS 672
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 57/103 (55%), Gaps = 2/103 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E A VF ++++ W P+ VY L+ + GK EKA + +QAM+ G + + +
Sbjct: 556 EEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLE 160
LLS + R + A+ LL+ M + G +P +QTY++L+ C +
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLAL-GLRPSLQTYTLLLSCCTD 656
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 130/255 (50%), Gaps = 3/255 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E A+ VF+ ++ +P + Y +I + GK + + +L+ M C + +YTA
Sbjct: 268 EEAIDVFQRMKRDRC-KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTA 326
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L++A++R GL E+A + E+++ G +PDV Y+ L++S + S M
Sbjct: 327 LVNAFAREGLCEKAEEIFEQLQED-GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 385
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G +P+ +YN ++DAYG+A S+ E+ EM P + + L A+ +
Sbjct: 386 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM-KRLGIAPTMKSHMLLLSAYSKARDVTK 444
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
E + G++P+ N +L+ YG+ + KM ++ M+ + I TYNI+I+
Sbjct: 445 CEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILIN 504
Query: 298 AFGKAGDLQQMEYLF 312
+GKAG L+++E LF
Sbjct: 505 IYGKAGFLERIEELF 519
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 120/231 (51%), Gaps = 8/231 (3%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERA-- 131
+PN Y L+ + EKA E+F+ + ++G D Y AL+ +YSR+G A
Sbjct: 318 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 132 -FSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLI 190
FSL++ M GC+PD +Y+I++ + + + +M GI P ++ L+
Sbjct: 378 IFSLMQHM----GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLL 433
Query: 191 DAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
AY KA+ ++ E+ + EM ++ +PD + +NS L +G LGQ ME+ + +
Sbjct: 434 SAYSKARDVTKCEAIVKEM-SENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPC 492
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
++ T+NIL++ YGK +++ + +++ ++ +VT+ I A+ +
Sbjct: 493 TADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR 543
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 133/269 (49%), Gaps = 14/269 (5%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+W+S + V E + + ++P+ + LI G+ Q ++A L+ +++ V ++Y
Sbjct: 156 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTY 215
Query: 116 TALLSAYSRSGLLERAFSLLEEMKS---TPGCQPDVQTYSILIKSCLEVF-----AFDKV 167
L+ AY +GL+ERA +L EM++ +P V Y+ I+ ++ A D
Sbjct: 216 ALLIKAYCMAGLIERAEVVLVEMQNHHVSPK-TIGVTVYNAYIEGLMKRKGNTEEAIDVF 274
Query: 168 QGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLR 227
Q + D KP T TYN +I+ YGKA + S M L + C+P++ T + +
Sbjct: 275 QRMKRDRC----KPTTETYNLMINLYGKASK-SYMSWKLYCEMRSHQCKPNICTYTALVN 329
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW 287
AF G + E +++ Q G++P+V +N L++SY + + + MQ
Sbjct: 330 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 389
Query: 288 TIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+YNI++DA+G+AG E +F M+
Sbjct: 390 DRASYNIMVDAYGRAGLHSDAEAVFEEMK 418
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 3/177 (1%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A VFE ++ +L P ++ L+ K + K + + M + G D ++L
Sbjct: 410 AEAVFEEMK-RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSML 468
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+ Y R G + +L EM++ P C D+ TY+ILI + ++++ L ++
Sbjct: 469 NLYGRLGQFTKMEKILAEMENGP-CTADISTYNILINIYGKAGFLERIEELFVELKEKNF 527
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
+P+ VT+ + I AY + K + + EM+ D C PD T L A + Q++
Sbjct: 528 RPDVVTWTSRIGAYSRKKLYVKCLEVFEEMI-DSGCAPDGGTAKVLLSACSSEEQVE 583
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 78/180 (43%), Gaps = 9/180 (5%)
Query: 145 QPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMES 204
QPDV +++LI + + F + + + L + P TY LI AY A E
Sbjct: 174 QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEV 233
Query: 205 TLVEMLADRDCQP---DVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG---IQPNVQTFN 258
LVEM + P V N+ + G + + E D FQ +P +T+N
Sbjct: 234 VLVEM-QNHHVSPKTIGVTVYNAYIE--GLMKRKGNTEEAIDVFQRMKRDRCKPTTETYN 290
Query: 259 ILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
++++ YGK + M+ + I TY +++AF + G ++ E +F ++ +
Sbjct: 291 LMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 350
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 114/244 (46%), Gaps = 2/244 (0%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+PN+ Y ++ ++ K Q A+EL + M + +D Y+ ++ + G L+ AF+
Sbjct: 225 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 284
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L EM+ G ++ TY+ILI +D LL DM I PN VT++ LID++
Sbjct: 285 LFNEME-MKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSF 343
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
K + E E EM+ R PD T S + F +D + D + G PN
Sbjct: 344 VKEGKLREAEELHKEMI-HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPN 402
Query: 254 VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFR 313
++TFNIL++ Y K + + M VTYN +I F + G L + LF+
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462
Query: 314 LMRS 317
M S
Sbjct: 463 EMVS 466
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 125/268 (46%), Gaps = 7/268 (2%)
Query: 53 TALRWESALKVFELLREQLWYR--PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVV 110
A RW+ K LLR+ + + PN + LI K + +A EL + M+ G
Sbjct: 310 NAGRWDDGAK---LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
D +YT+L+ + + L++A +++ M S GC P+++T++ILI + D L
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSK-GCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
M++ G+ +TVTYNTLI + + + + + EM++ R P++ T L
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS-RKVPPNIVTYKILLDGLC 484
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
+ G+ + ++K + + ++ ++ +NI++ + + +
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
TYNI+I K G L + E LFR M +
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEED 572
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 37/281 (13%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y PN+ + LI L + +ALEL MV+ G D + L++ SG
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 130 RAFSLLEEMKSTPGCQPDVQT-----------------------------------YSIL 154
A L+++M GCQP+ T YSI+
Sbjct: 211 EAMLLIDKMVEY-GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 155 IKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
I + + D L ++M + GI N +TYN LI + A R+ + L +M+ R
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK-RK 328
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
P+V T + + +F G++ E + + GI P+ T+ L+D + K + K +
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+++ M I T+NI+I+ + KA + LFR M
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 135/308 (43%), Gaps = 44/308 (14%)
Query: 46 EALHERVTALRWESALKVFELLREQLWYRPNSGV--YIKLIVMLGKCKQPEKALELFQAM 103
E L + ++ + A+ +F R+ + RP V + +L + K KQ + L L + M
Sbjct: 58 ERLRSGLVDIKADDAIDLF---RDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQM 114
Query: 104 VDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS-CLEVF 162
+G + + + +++ + R L AFS + ++ G +P+ T+S LI CLE
Sbjct: 115 ELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKL-GYEPNTITFSTLINGLCLEGR 173
Query: 163 AFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTM 222
+ ++ L+ M G KP+ +T NTL++ + + +E L++ + + CQP+ T
Sbjct: 174 VSEALE-LVDRMVEMGHKPDLITINTLVNGLCLSGKEAE-AMLLIDKMVEYGCQPNAVTY 231
Query: 223 NSTLRAFGNLGQ-----------------------------------IDTMERCYDKFQT 247
L GQ +D +++ +
Sbjct: 232 GPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEM 291
Query: 248 AGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
GI N+ T+NIL+ + + + ++ M K + +VT++++ID+F K G L++
Sbjct: 292 KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLRE 351
Query: 308 MEYLFRLM 315
E L + M
Sbjct: 352 AEELHKEM 359
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/277 (22%), Positives = 119/277 (42%), Gaps = 38/277 (13%)
Query: 58 ESALKVFELLREQLWYR---PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCES 114
E L+ E L +++ +R P++ Y LI K +KA ++ MV +GC + +
Sbjct: 346 EGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRT 405
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
+ L++ Y ++ ++ L +M S G D TY+ LI+ E+ + + L +M
Sbjct: 406 FNILINGYCKANRIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Query: 175 AIHGIKPNTVTYNTLIDAY---GKAKR----FSEMESTLVEM------------------ 209
+ PN VTY L+D G++++ F ++E + +E+
Sbjct: 465 VSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 524
Query: 210 ---------LADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
L + +P V T N + G + E + K + G P+ T+NIL
Sbjct: 525 DDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Query: 261 LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ ++ D K ++E +++ +S T +VID
Sbjct: 585 IRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 2/172 (1%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
A ELFQ MV + +Y LL +G E+A + E+++ + + D+ Y+I+I
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSK-MELDIGIYNIII 515
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
D L + + G+KP TYN +I K SE E +M D
Sbjct: 516 HGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH- 574
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKG 267
PD WT N +RA G + ++ + G + T +++D G
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDG 626
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 130/285 (45%), Gaps = 20/285 (7%)
Query: 34 INSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQP 93
I ++ L TV +H R+ +LR + K F ++ E+ +P
Sbjct: 100 IAARLHLHPTVWSLIH-RMRSLRIGPSPKTFAIVAERY----------------ASAGKP 142
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+KA++LF M + GC D S+ +L +S +E+A+ L ++ D TY++
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV--DTVTYNV 200
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
++ + K +L +M GI PN TYNT++ + +A + +EM R
Sbjct: 201 ILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM-KKR 259
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
DC+ DV T + + FG G+I +D+ G+ P+V T+N ++ K + +
Sbjct: 260 DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENA 319
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ E M + Y + TYN++I AG+ + E L + M +E
Sbjct: 320 VVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENE 364
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 8/245 (3%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKC--KQPEKALELFQAMVDEGCVVDCE 113
R E A ++F LR + + ++ Y +++ G C K+ KALE+ + MV+ G +
Sbjct: 176 RVEKAYELFRALRGR--FSVDTVTYN--VILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y +L + R+G + A+ EMK C+ DV TY+ ++ + + + +
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKR-DCEIDVVTYTTVVHGFGVAGEIKRARNVFDE 290
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M G+ P+ TYN +I K K E + E + R +P+V T N +R + G
Sbjct: 291 MIREGVLPSVATYNAMIQVLCK-KDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAG 349
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
+ E + + G +PN QT+N+++ Y + + +K + E M + TYN
Sbjct: 350 EFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYN 409
Query: 294 IVIDA 298
I+I
Sbjct: 410 ILISG 414
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 4/144 (2%)
Query: 60 ALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTAL 118
A VF E++RE + P+ Y +I +L K E A+ +F+ MV G + +Y L
Sbjct: 284 ARNVFDEMIREGVL--PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVL 341
Query: 119 LSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHG 178
+ +G R L++ M++ GC+P+ QTY+++I+ E +K GL M
Sbjct: 342 IRGLFHAGEFSRGEELMQRMENE-GCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 179 IKPNTVTYNTLIDAYGKAKRFSEM 202
PN TYN LI KR +M
Sbjct: 401 CLPNLDTYNILISGMFVRKRSEDM 424
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 5/226 (2%)
Query: 95 KALELFQAMVDEG--CVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYS 152
KAL+ F + + V D S+ + +R L +SL+ M+S P +T++
Sbjct: 72 KALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSL-RIGPSPKTFA 130
Query: 153 ILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLAD 212
I+ + DK L +M HG + ++NT++D K+KR E L L
Sbjct: 131 IVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV-EKAYELFRALRG 189
Query: 213 RDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKK 272
R D T N L + + + + GI PN+ T+N +L + + +
Sbjct: 190 R-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRH 248
Query: 273 MSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
M+K +VTY V+ FG AG++++ +F M E
Sbjct: 249 AWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 294
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 6/286 (2%)
Query: 27 KRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVM 86
K+ +KG I + ++ T+++AL AL +F + + RPN Y LI
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNV---NDALNLFTEMDNK-GIRPNVVTYNSLIRC 299
Query: 87 LGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
L + A L M++ + +++AL+ A+ + G L A L +EM P
Sbjct: 300 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDP 358
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
D+ TYS LI D+ + + M PN VTYNTLI + KAKR E
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
EM + R + T N+ ++ G D ++ + K + G+ P++ T++ILLD K
Sbjct: 419 REM-SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCK 477
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+K V EY+QK I TYNI+I+ KAG ++ LF
Sbjct: 478 YGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 523
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
Y+PN+ + LI L + +A+ L MV GC D +Y +++ + G ++ A
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 133 SLLEEMK----------------------------------STPGCQPDVQTYSILIKSC 158
SLL++M+ G +P+V TY+ LI+
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 159 LEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
+ LLSDM I PN VT++ LIDA+ K + E E EM+ R PD
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RSIDPD 359
Query: 219 VWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVME 278
++T +S + F ++D + ++ + PNV T+N L+ + K ++ +
Sbjct: 360 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFR 419
Query: 279 YMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
M + VTYN +I +AGD + +F+ M S+
Sbjct: 420 EMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 45/291 (15%)
Query: 65 ELLREQLWYRPNSGV--YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
+L E + RP + + KL+ + K + + + L + M + D SY L++ +
Sbjct: 66 DLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCF 125
Query: 123 SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
R L A ++L +M G +PD+ T S L+ + L+ M + +PN
Sbjct: 126 CRRSQLPLALAVLGKMMKL-GYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPN 184
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID------ 236
TVT+NTLI + SE + + M+A R CQPD++T + + G ID
Sbjct: 185 TVTFNTLIHGLFLHNKASEAVALIDRMVA-RGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 237 -TMER-----------------C-----------YDKFQTAGIQPNVQTFNIL---LDSY 264
ME+ C + + GI+PNV T+N L L +Y
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 265 GKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
G+ D S ++ M + + +VT++ +IDAF K G L + E L+ M
Sbjct: 304 GRWSD---ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 351
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 101/221 (45%), Gaps = 6/221 (2%)
Query: 102 AMVDEGCVVDCESYTALLSAYSRSGLLER----AFSLLEEMKSTPGCQPDVQTYSILIKS 157
A+VD+ V++ + T + L A +L++ M + GCQPD+ TY ++
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR-GCQPDLFTYGTVVNG 229
Query: 158 CLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQP 217
+ D LL M I+ + V Y T+IDA K ++ + EM ++ +P
Sbjct: 230 LCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM-DNKGIRP 288
Query: 218 DVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM 277
+V T NS +R N G+ R I PNV TF+ L+D++ K + +
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 278 EYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ M K I TY+ +I+ F L + +++F LM S+
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 112/242 (46%), Gaps = 3/242 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R + A +FEL+ + + PN Y LI K K+ E+ +ELF+ M G V + +Y
Sbjct: 375 RLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
L+ ++G + A + ++M S G PD+ TYSIL+ + +K + +
Sbjct: 434 NTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
++P+ TYN +I+ KA + + L+ + +P+V + + F G
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVIIYTTMISGFCRKGLK 551
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+ + + + + G PN T+N L+ + + D + +++ M+ + T ++V
Sbjct: 552 EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 611
Query: 296 ID 297
I+
Sbjct: 612 IN 613
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 121/243 (49%), Gaps = 2/243 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
Y+PN+ + LI L + +A+ L MV +GC D +Y +++ + G + AF
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
+LL +M+ +P V Y+ +I + D L +M GI+PN VTY++LI
Sbjct: 242 NLLNKMEQGK-LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
R+S+ L +M+ +R PDV+T ++ + AF G++ E+ YD+ I P
Sbjct: 301 LCNYGRWSDASRLLSDMI-ERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
++ T++ L++ + + + E+M H +VTYN +I F K +++ +F
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 313 RLM 315
R M
Sbjct: 420 REM 422
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 127/286 (44%), Gaps = 6/286 (2%)
Query: 27 KRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVM 86
+ ++G + L+ T+++ L + AL +F+ + E RPN Y LI
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGL---CKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISC 300
Query: 87 LGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
L + A L M++ D +++AL+ A+ + G L A L +EM P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR-SIDP 359
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
+ TYS LI D+ + + M P+ VTYNTLI + K KR E
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
EM + R + T N ++ G D + + + + G+ PN+ T+N LLD K
Sbjct: 420 REM-SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+K V EY+Q+ TI TYNI+I+ KAG ++ LF
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 110/242 (45%), Gaps = 3/242 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R + A ++FE + + + P+ Y LI K K+ E+ +E+F+ M G V + +Y
Sbjct: 376 RLDEAKQMFEFMVSKHCF-PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
L+ ++G + A + +EM S G P++ TY+ L+ + +K + +
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 493
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
++P TYN +I+ KA + + L+ + +PDV N+ + F G
Sbjct: 494 RSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVKPDVVAYNTMISGFCRKGSK 552
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+ + + + + G PN +N L+ + + D + + +++ M+ ++ T +V
Sbjct: 553 EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
Query: 296 ID 297
+
Sbjct: 613 TN 614
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 2/225 (0%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+ A+ LF MV ++ LLSA ++ + SL E+M++ G + TYSI
Sbjct: 63 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL-GIPHNHYTYSI 121
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
LI +L M G +PN VT ++L++ Y +KR SE LV+ +
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISE-AVALVDQMFVT 180
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
QP+ T N+ + + D+ G QP++ T+ ++++ K D
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
++ M++ ++ YN +ID K + LF+ M ++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETK 285
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 97/212 (45%), Gaps = 3/212 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R E ++VF + Q N+ Y LI L + + A E+F+ MV +G + +Y
Sbjct: 411 RVEEGMEVFREM-SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
LL ++G LE+A + E ++ + +P + TY+I+I+ + + L +++
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
+ G+KP+ V YNT+I + + E ++ EM D P+ N+ +RA G
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED-GTLPNSGCYNTLIRARLRDGDR 587
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKG 267
+ + ++ G + T ++ + G
Sbjct: 588 EASAELIKEMRSCGFAGDASTIGLVTNMLHDG 619
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 8/187 (4%)
Query: 123 SRSGL----LERAFSLLEEM-KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
SR+GL L+ A +L EM KS P P + +S L+ + ++ FD V L M
Sbjct: 53 SRNGLSELKLDDAVALFGEMVKSRP--FPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
GI N TY+ LI+ + + + + L +M+ +P++ T++S L + + +I
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMK-LGYEPNIVTLSSLLNGYCHSKRISE 169
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
D+ G QPN TFN L+ + + A+++ M +VTY +V++
Sbjct: 170 AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVN 229
Query: 298 AFGKAGD 304
K GD
Sbjct: 230 GLCKRGD 236
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 116/255 (45%), Gaps = 3/255 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
+ AL +F + E RPN Y LI L ++ A L M++ + ++ A
Sbjct: 277 DDALNLFTEM-ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNA 335
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+ A+ + G L A L +EM PD+ TYS LI D+ + + M
Sbjct: 336 LIDAFVKEGKLVEAEKLYDEMIKRS-IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 394
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
PN VTYNTLI+ + KAKR E EM + R + T + + F D
Sbjct: 395 DCFPNVVTYNTLINGFCKAKRIDEGVELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDN 453
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ + + + G+ PN+ T+N LLD K +K V EY+Q+ TI TYNI+I+
Sbjct: 454 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 513
Query: 298 AFGKAGDLQQMEYLF 312
KAG ++ LF
Sbjct: 514 GMCKAGKVEDGWDLF 528
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 122/283 (43%), Gaps = 35/283 (12%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
++ YRP++ + LI L + +A+ L MV GC + +Y +++ + G ++
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 130 RAFSLLEEMKS----------------------------------TPGCQPDVQTYSILI 155
AF+LL +M++ G +P+V TYS LI
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
+ LLSDM I PN VT+N LIDA+ K + E E EM+ R
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK-RSI 361
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
PD++T +S + F ++D + ++ + PNV T+N L++ + K +
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ M + VTY +I F +A D + +F+ M S+
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 464
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 119/281 (42%), Gaps = 37/281 (13%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y P+ L+ K+ A+ L MV+ G D ++T L+
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV----FAF--------------------- 164
A +L++ M GCQP++ TY +++ + AF
Sbjct: 208 EAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTV 266
Query: 165 ----------DKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
D L ++M G++PN +TY++LI +R+S+ L +M+ +R
Sbjct: 267 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI-ERK 325
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
P+V T N+ + AF G++ E+ YD+ I P++ T++ L++ + +
Sbjct: 326 INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 385
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ E M +VTYN +I+ F KA + + LFR M
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 90/208 (43%), Gaps = 2/208 (0%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+ A+ LF MV + + LLSA ++ + SL E+M+ G ++ TY+I
Sbjct: 67 DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL-GISHNLYTYNI 125
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
LI LL M G +P+ VT ++L++ Y KR S+ LV+ + +
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD-AVALVDQMVEM 184
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
+PD T + + + D+ G QPN+ T+ ++++ K D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
++ M+ +V Y+ VID+ K
Sbjct: 245 FNLLNKMEAAKIEANVVIYSTVIDSLCK 272
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 65 ELLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
EL RE Q N+ Y LI + + + A +F+ MV +G + +Y LL
Sbjct: 421 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Query: 123 SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
++G LE+A + E ++ + +P + TY+I+I+ + + L +++ G+KP+
Sbjct: 481 CKNGKLEKAMVVFEYLQRSK-MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPD 539
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLAD 212
+ YNT+I + + E ++ +M D
Sbjct: 540 VIIYNTMISGFCRKGLKEEADALFRKMRED 569
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 113/245 (46%), Gaps = 2/245 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
++PN Y ++ ++ K Q A+EL + M + +D Y+ ++ + G L+ AF
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
+L EM+ G + D+ Y+ LI+ +D LL DM I P+ V ++ LID
Sbjct: 268 NLFNEME-IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC 326
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
+ K + E E EM+ R PD T S + F Q+D D + G P
Sbjct: 327 FVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGP 385
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
N++TFNIL++ Y K + + M VTYN +I F + G L+ + LF
Sbjct: 386 NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELF 445
Query: 313 RLMRS 317
+ M S
Sbjct: 446 QEMVS 450
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 125/267 (46%), Gaps = 7/267 (2%)
Query: 54 ALRWESALKVFELLREQLWYR--PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVD 111
A RW+ K LLR+ + + P+ + LI K + +A EL + M+ G D
Sbjct: 295 AGRWDDGAK---LLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351
Query: 112 CESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
+YT+L+ + + L++A +L+ M S GC P+++T++ILI + D L
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVS-KGCGPNIRTFNILINGYCKANLIDDGLELF 410
Query: 172 SDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
M++ G+ +TVTYNTLI + + + E+ L + + R +PD+ + L +
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKL-EVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVT 291
G+ + ++K + + ++ ++ +NI++ + + + T
Sbjct: 470 NGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKT 529
Query: 292 YNIVIDAFGKAGDLQQMEYLFRLMRSE 318
YNI+I K G L + + LFR M +
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEED 556
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/298 (22%), Positives = 128/298 (42%), Gaps = 40/298 (13%)
Query: 37 KKLLPRTVLEALHERVTALRWESALKVFELLREQLWYR---PNSGVYIKLIVMLGKCKQP 93
+K+ P V A + E L+ E L +++ R P++ Y LI K Q
Sbjct: 311 RKITPDVV--AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+KA + MV +GC + ++ L++ Y ++ L++ L +M S G D TY+
Sbjct: 369 DKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM-SLRGVVADTVTYNT 427
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY---GKAKR----FSEMESTL 206
LI+ E+ + + L +M ++P+ V+Y L+D G+ ++ F ++E +
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 207 VEM---------------------------LADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
+E+ L + +PDV T N + G + +
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 240 RCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ K + G PN T+NIL+ ++ D K + ++E +++ +S T +V+D
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVD 605
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 106/249 (42%), Gaps = 2/249 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y P++ + LI L + +ALEL MV+ G + AL++ +G +
Sbjct: 135 KLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVS 194
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A L++ M T G QP+ TY ++K + LL M IK + V Y+ +
Sbjct: 195 DAVLLIDRMVET-GFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
ID K + EM + + D+ + +R F G+ D +
Sbjct: 254 IDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I P+V F+ L+D + K ++ + + M + S VTY +ID F K L +
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 310 YLFRLMRSE 318
++ LM S+
Sbjct: 373 HMLDLMVSK 381
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 94/224 (41%), Gaps = 2/224 (0%)
Query: 92 QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTY 151
+ + A++LFQ M ++ L S +R+ + L ++M+ G ++ T
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQME-LKGIAHNLYTL 110
Query: 152 SILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA 211
SI+I C + + G +P+TVT++TLI+ R SE LV+ +
Sbjct: 111 SIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSE-ALELVDRMV 169
Query: 212 DRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYK 271
+ +P + T+N+ + G++ D+ G QPN T+ +L K
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 272 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
++ M++ V Y+I+ID K G L LF M
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM 273
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 104/204 (50%), Gaps = 2/204 (0%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
++ LL+ + G ++ F +L+EMKS G +PD Q Y+++I + + D M
Sbjct: 412 FSRLLAGFRDRGEWQKTFQVLKEMKSI-GVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
GI+P+ VT+NTLID + K R E + E + R C P T N + ++G+ +
Sbjct: 471 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEE-MFEAMERRGCLPCATTYNIMINSYGDQER 529
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNI 294
D M+R K ++ GI PNV T L+D YGK + +E M+ + YN
Sbjct: 530 WDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNA 589
Query: 295 VIDAFGKAGDLQQMEYLFRLMRSE 318
+I+A+ + G +Q FR+M S+
Sbjct: 590 LINAYAQRGLSEQAVNAFRVMTSD 613
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 140/300 (46%), Gaps = 10/300 (3%)
Query: 18 REATKAIIDKRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLRE--QLWYRP 75
R + I+ K + G + + +L +R W+ K F++L+E + +P
Sbjct: 389 RWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRG---EWQ---KTFQVLKEMKSIGVKP 442
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
+ Y +I GK + A+ F M+ EG D ++ L+ + + G A +
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMF 502
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
E M+ GC P TY+I+I S + +D ++ LL M GI PN VT+ TL+D YGK
Sbjct: 503 EAMERR-GCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
+ RF++ L EM +P N+ + A+ G + + + G++P++
Sbjct: 562 SGRFNDAIECLEEM-KSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLL 620
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
N L++++G+ + AV++YM++ +VTY ++ A + Q++ ++ M
Sbjct: 621 ALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEM 680
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 113/242 (46%), Gaps = 2/242 (0%)
Query: 77 SGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLE 136
+ + +I L + +A LF+ + G +Y ALL Y ++G L+ A S++
Sbjct: 304 TATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVS 363
Query: 137 EMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKA 196
EM+ G PD TYS+LI + + ++ + +L +M ++PN+ ++ L+ +
Sbjct: 364 EMEKR-GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDR 422
Query: 197 KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQT 256
+ + L EM +PD N + FG +D +D+ + GI+P+ T
Sbjct: 423 GEWQKTFQVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVT 481
Query: 257 FNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+N L+D + K + + E M++ TYNI+I+++G M+ L M+
Sbjct: 482 WNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMK 541
Query: 317 SE 318
S+
Sbjct: 542 SQ 543
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 112/241 (46%), Gaps = 9/241 (3%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
+Y LI LG+ EK E F ++ + + +Y AL+ A +R+ +E+A +L+ +M
Sbjct: 169 LYSILIHALGRS---EKLYEAF--LLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKM 223
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQ--GLLSDMAIHGIKPNTVTYNTLIDAYGKA 196
+ G Q D YS++I+S D V L ++ ++ + N +I + K+
Sbjct: 224 RQD-GYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKS 282
Query: 197 KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQT 256
S+ L+ M T+ S + A + G+ E +++ + +GI+P +
Sbjct: 283 GDPSKALQ-LLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 257 FNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+N LL Y K K +++ M+K S TY+++IDA+ AG + + + M
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401
Query: 317 S 317
+
Sbjct: 402 A 402
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 3/163 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
RW+ ++ ++ Q PN + L+ + GK + A+E + M G Y
Sbjct: 529 RWDDMKRLLGKMKSQ-GILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMY 587
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
AL++AY++ GL E+A + M S G +P + + LI + E + +L M
Sbjct: 588 NALINAYAQRGLSEQAVNAFRVMTSD-GLKPSLLALNSLINAFGEDRRDAEAFAVLQYMK 646
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
+G+KP+ VTY TL+ A + +F ++ EM+ C+PD
Sbjct: 647 ENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMS-GCKPD 688
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 4/159 (2%)
Query: 26 DKRRKKGPINSKKLLPRTVLEALHERV--TALRWESALKVFELLREQLWYRPNSGVYIKL 83
D +R G + S+ +LP V V + R+ A++ E ++ + +P+S +Y L
Sbjct: 532 DMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK-SVGLKPSSTMYNAL 590
Query: 84 IVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPG 143
I + E+A+ F+ M +G + +L++A+ AF++L+ MK G
Sbjct: 591 INAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN-G 649
Query: 144 CQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
+PDV TY+ L+K+ + V F KV + +M + G KP+
Sbjct: 650 VKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPD 688
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 6/276 (2%)
Query: 43 TVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQA 102
T+L +L + + + + A++V + + ++ Y P+ Y LI + A++L
Sbjct: 209 TILRSLCD---SGKLKQAMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLDE 264
Query: 103 MVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVF 162
M D GC D +Y L++ + G L+ A L +M S+ GCQP+V T++I+++S
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSS-GCQPNVITHNIILRSMCSTG 323
Query: 163 AFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTM 222
+ + LL+DM G P+ VT+N LI+ + K ++E + CQP+ +
Sbjct: 324 RWMDAEKLLADMLRKGFSPSVVTFNILINFLCR-KGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 223 NSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQK 282
N L F ++D ++ + G P++ T+N +L + K + ++ +
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 283 YHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
S ++TYN VID KAG + L MR++
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 8/223 (3%)
Query: 81 IKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKS 140
I+ LGK ++ K LE+ + G V D +Y ++S Y ++G + A S+L+ M
Sbjct: 144 IRGFCRLGKTRKAAKILEILEG---SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSV 200
Query: 141 TPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS 200
+P DV TY+ +++S + + +L M P+ +TY LI+A +
Sbjct: 201 SP----DVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
L EM DR C PDV T N + G++D + + ++G QPNV T NI+
Sbjct: 257 HAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 261 LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
L S + ++ M + +S ++VT+NI+I+ + G
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKG 358
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 121/250 (48%), Gaps = 7/250 (2%)
Query: 56 RWESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCES 114
RW A K+ ++LR+ + P+ + LI L + +A+++ + M GC + S
Sbjct: 324 RWMDAEKLLADMLRK--GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLS 381
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS-CLEVFAFDKVQGLLSD 173
Y LL + + ++RA LE M S GC PD+ TY+ ++ + C + D V+ +L+
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSR-GCYPDIVTYNTMLTALCKDGKVEDAVE-ILNQ 439
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
++ G P +TYNT+ID KA + + L EM A +D +PD T +S + G
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA-KDLKPDTITYSSLVGGLSREG 498
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
++D + + +F+ GI+PN TFN ++ K + + +M +Y
Sbjct: 499 KVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYT 558
Query: 294 IVIDAFGKAG 303
I+I+ G
Sbjct: 559 ILIEGLAYEG 568
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 86/188 (45%), Gaps = 13/188 (6%)
Query: 124 RSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNT 183
R+G LE F LE M G PD+ + LI+ + K +L + G P+
Sbjct: 114 RTGELEEGFKFLENM-VYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDV 172
Query: 184 VTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYD 243
+TYN +I Y KA + S L M PDV T N+ LR+ + G++ D
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 244 KFQTAGIQPNVQTFNILLDSY----GKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
+ P+V T+ IL+++ G GH K +++ M+ + +VTYN++++
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMK----LLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 300 GKAGDLQQ 307
K G L +
Sbjct: 285 CKEGRLDE 292
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 118/243 (48%), Gaps = 5/243 (2%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN+ Y LI L K Q E+A EL + + +G + D ++ +L+ + A L
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
EEM+S GC+PD TY++LI S D+ +L M + G + +TYNTLID +
Sbjct: 423 FEEMRSK-GCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
KA + E E EM + V T N+ + +++ + D+ G +P+
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSV-TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDK 540
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
T+N LL + +G D KK + +++ M IVTY +I KAG ++E +L
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAG---RVEVASKL 597
Query: 315 MRS 317
+RS
Sbjct: 598 LRS 600
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 113/241 (46%), Gaps = 2/241 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ + LI L + A+ELF+ M +GC D +Y L+ + G L+ A ++
Sbjct: 398 PDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNM 457
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L++M+ + GC V TY+ LI + + + + +M +HG+ N+VTYNTLID
Sbjct: 458 LKQMELS-GCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
K++R + + +M+ + +PD +T NS L F G I + G +P++
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQ-KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDI 575
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
T+ L+ K + S ++ +Q + T YN VI + + LFR
Sbjct: 576 VTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFRE 635
Query: 315 M 315
M
Sbjct: 636 M 636
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 118/247 (47%), Gaps = 2/247 (0%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R E AL + + Q + P+ + L+ L K + A+E+ M+ EG D +Y
Sbjct: 274 RVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTY 333
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
+++S + G ++ A +L++M T C P+ TY+ LI + + ++ L +
Sbjct: 334 NSVISGLCKLGEVKEAVEVLDQM-ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLT 392
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
GI P+ T+N+LI R + L E + + C+PD +T N + + + G++
Sbjct: 393 SKGILPDVCTFNSLIQGLC-LTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
D + + +G +V T+N L+D + K + ++ + + M+ + S VTYN +
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 296 IDAFGKA 302
ID K+
Sbjct: 512 IDGLCKS 518
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 1/158 (0%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
NS Y LI L K ++ E A +L M+ EG D +Y +LL+ + R G +++A ++
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+ M S GC+PD+ TY LI + + LL + + GI YN +I +
Sbjct: 564 QAMTSN-GCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFR 622
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
++ +E + EML + PD + R N G
Sbjct: 623 KRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 3/259 (1%)
Query: 61 LKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQA-MVDEGCVVDCESYTALL 119
L V + + ++ +P++ Y +++ +L K +E+ A M G D ++ L+
Sbjct: 138 LSVVDWMIDEFGLKPDTHFYNRMLNLLVD-GNSLKLVEISHAKMSVWGIKPDVSTFNVLI 196
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
A R+ L A +LE+M S G PD +T++ +++ +E D + M G
Sbjct: 197 KALCRAHQLRPAILMLEDMPSY-GLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
+ V+ N ++ + K R + + + EM PD +T N+ + G +
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 240 RCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
D G P+V T+N ++ K + K+ V++ M S VTYN +I
Sbjct: 316 EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375
Query: 300 GKAGDLQQMEYLFRLMRSE 318
K +++ L R++ S+
Sbjct: 376 CKENQVEEATELARVLTSK 394
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 119/285 (41%), Gaps = 37/285 (12%)
Query: 59 SALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTAL 118
+AL++F L ++ + P +Y ++++ LG+ + ++ + M C + ++ L
Sbjct: 65 AALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLIL 124
Query: 119 LSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHG 178
+ +Y++ L + S+++ M G +PD Y+ ++ ++ + V+ + M++ G
Sbjct: 125 IESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWG 184
Query: 179 IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTM 238
IKP+ T+N LI A +A + ++E + PD T + ++ + G +D
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRP-AILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 239 ERCYDKF------------------------------------QTAGIQPNVQTFNILLD 262
R ++ G P+ TFN L++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 263 SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
K K +M+ M + Y + TYN VI K G++++
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKE 348
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 122/246 (49%), Gaps = 2/246 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
++ Y+P++ + L+ L + + +A+ L + MV +GC D +Y A+++ + G +
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A +LL +M+ + DV YS +I S + D L ++M GI+P+ TY++L
Sbjct: 223 LALNLLNKMEKGK-IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
I R+S+ L +ML +R P+V T NS + AF G++ E+ +D+
Sbjct: 282 ISCLCNYGRWSDASRLLSDML-ERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I PN+ T+N L++ + + + M +VTYN +I+ F KA +
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 310 YLFRLM 315
LFR M
Sbjct: 401 ELFRDM 406
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 115/269 (42%), Gaps = 37/269 (13%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
+Y +I L K + + AL LF M ++G D +Y++L+S G A LL +M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
P+V T++ LI + + + + L +M I PN VTYN+LI+ + R
Sbjct: 302 LERK-INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAF----------------------GNL---- 232
E + M++ +DC PDV T N+ + F GN
Sbjct: 361 LDEAQQIFTLMVS-KDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 233 ---------GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKY 283
D + + + + G+ PN+ T+N LLD K +K V EY+QK
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 284 HYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
I TYNI+ + KAG ++ LF
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 113/249 (45%), Gaps = 2/249 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y P+ L+ + +A+ L MV+ G D ++T L+ +
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A +L+E M GCQPD+ TY +I + D LL+ M I+ + V Y+T+
Sbjct: 188 EAVALVERM-VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTV 246
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
ID+ K + + + EM ++ +PDV+T +S + N G+ R
Sbjct: 247 IDSLCKYRHVDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK 305
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I PNV TFN L+D++ K + + + M + IVTYN +I+ F L + +
Sbjct: 306 INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQ 365
Query: 310 YLFRLMRSE 318
+F LM S+
Sbjct: 366 QIFTLMVSK 374
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 123/309 (39%), Gaps = 40/309 (12%)
Query: 26 DKRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYR---PNSGVYIK 82
D R + +K+ P V + + A E L E L +++ R PN Y
Sbjct: 293 DASRLLSDMLERKINPNVV--TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNS 350
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LI + ++A ++F MV + C+ D +Y L++ + ++ + L +M S
Sbjct: 351 LINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM-SRR 409
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF--- 199
G + TY+ LI + D Q + M G+ PN +TYNTL+D K +
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469
Query: 200 ---------SEMESTL---------------VEMLADRDC-------QPDVWTMNSTLRA 228
S+ME + VE D C +PDV N+ +
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529
Query: 229 FGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWT 288
F G + + K + G P+ T+N L+ ++ + D + +++ M+ ++
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589
Query: 289 IVTYNIVID 297
TY +V D
Sbjct: 590 ASTYGLVTD 598
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 114 SYTALLSAYSRSGLL----ERAFSLLEEM-KSTPGCQPDVQTYSILIKSCLEVFAFDKVQ 168
SY SR+ LL + A L EM KS P P + +S L+ + ++ FD V
Sbjct: 28 SYDGYREKLSRNALLHLKLDEAVDLFGEMVKSRP--FPSIVEFSKLLSAIAKMKKFDLVI 85
Query: 169 GLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRA 228
M I G+ N TYN +I+ + + S + L +M+ P + T+NS L
Sbjct: 86 SFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMK-LGYGPSIVTLNSLLNG 144
Query: 229 FGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWT 288
F + +I D+ G QP+ TF L+ + + + A++E M
Sbjct: 145 FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 204
Query: 289 IVTYNIVIDAFGKAGD 304
+VTY VI+ K G+
Sbjct: 205 LVTYGAVINGLCKRGE 220
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 89/208 (42%), Gaps = 2/208 (0%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
++A++LF MV ++ LLSA ++ + S E+M+ G ++ TY+I
Sbjct: 47 DEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKME-ILGVSHNLYTYNI 105
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
+I +L M G P+ VT N+L++ + R SE LV+ + +
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE-AVALVDQMVEM 164
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
QPD T + + + ++ G QP++ T+ +++ K +
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
++ M+K +V Y+ VID+ K
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCK 252
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 115/258 (44%), Gaps = 40/258 (15%)
Query: 81 IKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKS 140
I + ++G+ + EK L+ + G V+D ++ ++ Y ++G LE A S+LE M
Sbjct: 565 IDIYTVMGEFSEAEK---LYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDE 621
Query: 141 TPGCQPDV-----------------------------------QTYSILIKSCLEVFAFD 165
PDV + Y+ +I C D
Sbjct: 622 QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLD 681
Query: 166 KVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNST 225
++ G +M +G PNTVT+N L+D YGKAK F ++ +LA R DV + N+
Sbjct: 682 ELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELF--LLAKRHGVVDVISYNTI 739
Query: 226 LRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHY 285
+ A+G M Q G +++ +N LLD+YGK +K ++++ M+K
Sbjct: 740 IAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTS 799
Query: 286 SWTIVTYNIVIDAFGKAG 303
TYNI+I+ +G+ G
Sbjct: 800 GPDHYTYNIMINIYGEQG 817
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 127/266 (47%), Gaps = 3/266 (1%)
Query: 52 VTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVD 111
V A E A V E++ EQ P+ ++ ++ + KC +K L+ + G +
Sbjct: 604 VKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWN 663
Query: 112 CESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
E Y +++ +R+ L+ EEM G P+ T+++L+ + F KV L
Sbjct: 664 QEMYNCVINCCARALPLDELSGTFEEMIRY-GFTPNTVTFNVLLDVYGKAKLFKKVNELF 722
Query: 172 SDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
HG+ + ++YNT+I AYGK K ++ M S + M D + N+ L A+G
Sbjct: 723 LLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFD-GFSVSLEAYNTLLDAYGK 780
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVT 291
Q++ + + + P+ T+NI+++ YG+ +++ V++ +++ + +
Sbjct: 781 DKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCS 840
Query: 292 YNIVIDAFGKAGDLQQMEYLFRLMRS 317
YN +I A+G G +++ L + MR
Sbjct: 841 YNTLIKAYGIGGMVEEAVGLVKEMRG 866
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 130/332 (39%), Gaps = 71/332 (21%)
Query: 54 ALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGC----- 108
A +E A ++ L+ + Y+PNS LI + K + A++ + M GC
Sbjct: 397 ADNYEEAKHYYQELK-RCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSI 455
Query: 109 ---------------VVDC--------------ESYTALLSAYSRSGLLERAFSLLEEMK 139
VV C S+++L+ AY + G+++ LL E K
Sbjct: 456 LGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKK 515
Query: 140 STPGCQPDVQTYSILIKSCLE-----------------------------------VFAF 164
+ Y +LI SC E + F
Sbjct: 516 WRDSA-FESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEF 574
Query: 165 DKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNS 224
+ + L ++ G+ + + ++ ++ Y KA E S L M +D PDV+
Sbjct: 575 SEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRD 634
Query: 225 TLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYH 284
LR + D ++ Y + + +GI N + +N +++ + ++S E M +Y
Sbjct: 635 MLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYG 694
Query: 285 YSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
++ VT+N+++D +GKA +++ LF L +
Sbjct: 695 FTPNTVTFNVLLDVYGKAKLFKKVNELFLLAK 726
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
Query: 62 KVFELLREQLWYRPNSGV-----YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
K+F+ + E GV Y +I GK K + M +G V E+Y
Sbjct: 713 KLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYN 772
Query: 117 ALLSAYSRSGLLERAFSLLEEMK-STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
LL AY + +E+ S+L+ MK ST G PD TY+I+I E D+V +L ++
Sbjct: 773 TLLDAYGKDKQMEKFRSILKRMKKSTSG--PDHYTYNIMINIYGEQGWIDEVADVLKELK 830
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAF 229
G+ P+ +YNTLI AYG E + EM R+ PD T + + A
Sbjct: 831 ESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRG-RNIIPDKVTYTNLVTAL 883
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 106/226 (46%), Gaps = 7/226 (3%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y +I + + + +KA E+ M + + E++ +L+AYS+ G +E A S+L M+
Sbjct: 282 YSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSME 341
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
+ G P++ Y+ LI ++F + QGL + G++P+ +Y ++I+ +G+A +
Sbjct: 342 AA-GFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400
Query: 200 SEMESTLVEMLADRDC--QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF 257
E + E+ + C +P+ + + + + G D + + G Q +
Sbjct: 401 EEAKHYYQEL---KRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYS-SIL 456
Query: 258 NILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
I+L +Y K + V++ H +++ ++ A+ K G
Sbjct: 457 GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHG 502
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 3/198 (1%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ PN+ + L+ + GK K +K ELF G VVD SY +++AY ++
Sbjct: 695 FTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHG-VVDVISYNTIIAAYGKNKDYTNMS 753
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
S ++ M+ G ++ Y+ L+ + + +K + +L M P+ TYN +I+
Sbjct: 754 SAIKNMQ-FDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINI 812
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
YG+ E+ L E L + PD+ + N+ ++A+G G ++ + + I P
Sbjct: 813 YGEQGWIDEVADVLKE-LKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIP 871
Query: 253 NVQTFNILLDSYGKGHDY 270
+ T+ L+ + + ++
Sbjct: 872 DKVTYTNLVTALRRNDEF 889
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 1/122 (0%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y L+ GK KQ EK + + M D +Y +++ Y G ++ +L+E+K
Sbjct: 771 YNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELK 830
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
+ G PD+ +Y+ LIK+ ++ GL+ +M I P+ VTY L+ A + F
Sbjct: 831 ES-GLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEF 889
Query: 200 SE 201
E
Sbjct: 890 LE 891
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 92/223 (41%), Gaps = 11/223 (4%)
Query: 96 ALELFQAMVDEGCVV-DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSIL 154
A++ F M G +V + +Y+ +L R +RA L++E+ Q Q ++ +
Sbjct: 157 AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTV 216
Query: 155 IKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEM----L 210
I +C + M G++PN T L+ Y K E E M +
Sbjct: 217 IYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI 276
Query: 211 ADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDY 270
+ T+ + LR + D E D + ++ ++ + ++L++Y +
Sbjct: 277 VCESAYSSMITIYTRLRLY------DKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKM 330
Query: 271 KKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFR 313
+ +++ M+ +S I+ YN +I +GK ++ + LF
Sbjct: 331 ELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFH 373
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 108/209 (51%), Gaps = 2/209 (0%)
Query: 107 GCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDK 166
G V D +Y +L+ Y + GL+ A +L +M++ GC+P+V +Y+IL+ ++ D+
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDE 442
Query: 167 VQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTL 226
+L++M+ G+KPNTV +N LI A+ K R E EM + C+PDV+T NS +
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREM-PRKGCKPDVYTFNSLI 501
Query: 227 RAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYS 286
+ +I + G+ N T+N L++++ + + K+ ++ M
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 287 WTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+TYN +I +AG++ + LF M
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 7/261 (2%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCK--QPEKALELFQAMVDEGCVVDCESYTA 117
AL+V +R + +PN VY I++ G CK + ++A + M +G + +
Sbjct: 408 ALEVLHDMRNK-GCKPN--VYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+SA+ + + A + EM GC+PDV T++ LI EV LL DM
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G+ NTVTYNTLI+A+ + E + EM+ + D T NS ++ G++D
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF-QGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
++K G P+ + NIL++ + ++ + M + IVT+N +I+
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642
Query: 298 AFGKAGDLQQMEYLFRLMRSE 318
+AG ++ +FR +++E
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAE 663
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 117/276 (42%), Gaps = 34/276 (12%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PNS +Y LI L KC + +AL+L + M GCV D E++ ++ + + A +
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCL------------------EVFAF------------ 164
+ M G PD TY L+ E+ F
Sbjct: 310 VNRML-IRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGR 368
Query: 165 -DKVQGLLSDMAI-HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTM 222
D + +LSDM +GI P+ TYN+LI Y K L +M ++ C+P+V++
Sbjct: 369 LDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM-RNKGCKPNVYSY 427
Query: 223 NSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQK 282
+ F LG+ID ++ G++PN FN L+ ++ K H + + M +
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 283 YHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ T+N +I + +++ +L R M SE
Sbjct: 488 KGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 10/246 (4%)
Query: 56 RWESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCES 114
R A+++F E+ R+ +P+ + LI L + + + AL L + M+ EG V + +
Sbjct: 474 RIPEAVEIFREMPRKGC--KPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
Y L++A+ R G ++ A L+ EM G D TY+ LIK DK + L M
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEM-VFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
G P+ ++ N LI+ ++ E EM+ R PD+ T NS + G+
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL-RGSTPDIVTFNSLINGLCRAGR 649
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKG---HDYKKM--SAVMEYMQKYHYSWTI 289
I+ + K Q GI P+ TFN L+ KG +D + + + H +W+I
Sbjct: 650 IEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSI 709
Query: 290 VTYNIV 295
+ +I+
Sbjct: 710 LLQSII 715
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 115/288 (39%), Gaps = 40/288 (13%)
Query: 55 LRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCES 114
L +++++F Q YR + VY LI LG + + L M DEG V
Sbjct: 89 LNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESL 148
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIK-----SCLEV-------- 161
+ +++ Y ++G + L+ EM++ C+P ++Y+++++ +C +V
Sbjct: 149 FISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDM 208
Query: 162 ---------FAF-------------DKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
F F D LL DM HG PN+V Y TLI + K R
Sbjct: 209 LSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 268
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
+E L EM C PD T N + +I+ + ++ G P+ T+
Sbjct: 269 NEALQLLEEMFL-MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
L++ K ++ A + + IV +N +I F G L
Sbjct: 328 LMNGLCK---IGRVDAAKDLFYRIPKP-EIVIFNTLIHGFVTHGRLDD 371
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 4/261 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKAL-ELFQAMVDEGCVVDCESYT 116
E A+ VF ++E RPN Y +I GK K + + F M G D ++
Sbjct: 285 EEAISVFNSMKE-YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFN 343
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
+LL+ SR GL E A +L +EM + + DV +Y+ L+ + + D +L+ M +
Sbjct: 344 SLLAVCSRGGLWEAARNLFDEMTNRR-IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPV 402
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
I PN V+Y+T+ID + KA RF E + EM D + N+ L + +G+ +
Sbjct: 403 KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRY-LGIALDRVSYNTLLSIYTKVGRSE 461
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ + GI+ +V T+N LL YGK Y ++ V M++ H ++TY+ +I
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 297 DAFGKAGDLQQMEYLFRLMRS 317
D + K G ++ +FR +S
Sbjct: 522 DGYSKGGLYKEAMEIFREFKS 542
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 2/230 (0%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+P+ + L+ + + E A LF M + D SY LL A + G ++ AF
Sbjct: 336 QPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFE 395
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
+L +M P+V +YS +I + FD+ L +M GI + V+YNTL+ Y
Sbjct: 396 ILAQMP-VKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIY 454
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
K R E L EM A + DV T N+ L +G G+ D +++ + + + + PN
Sbjct: 455 TKVGRSEEALDILREM-ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
Query: 254 VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
+ T++ L+D Y KG YK+ + + +V Y+ +IDA K G
Sbjct: 514 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNG 563
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 116/236 (49%), Gaps = 3/236 (1%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
+I LG+ + A +F+ G +++AL+SAY RSGL E A S+ MK
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEY- 297
Query: 143 GCQPDVQTYSILIKSCLE-VFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
G +P++ TY+ +I +C + F +V +M +G++P+ +T+N+L+ + + E
Sbjct: 298 GLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLW-E 356
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
L + + +R + DV++ N+ L A GQ+D + I PNV +++ ++
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 262 DSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
D + K + + + M+ + V+YN ++ + K G ++ + R M S
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 115/263 (43%), Gaps = 52/263 (19%)
Query: 56 RWESALKVFELLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE 113
R E AL ++LRE + + + Y L+ GK + ++ ++F M E + +
Sbjct: 459 RSEEAL---DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLL 515
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y+ L+ YS+ GL + A + E KS G + DV YS LI + + L+ +
Sbjct: 516 TYSTLIDGYSKGGLYKEAMEIFREFKSA-GLRADVVLYSALIDALCKNGLVGSAVSLIDE 574
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRF---------------SEMESTLVEMLADR----- 213
M GI PN VTYN++IDA+G++ S S L E +R
Sbjct: 575 MTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLF 634
Query: 214 -------------DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
DC+ + ++ L F + Q++ I+PNV TF+ +
Sbjct: 635 GQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLE-------------IKPNVVTFSAI 681
Query: 261 LDSYGKGHDYKKMSAVMEYMQKY 283
L++ + + ++ S ++E ++ +
Sbjct: 682 LNACSRCNSFEDASMLLEELRLF 704
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 127/247 (51%)
Query: 69 EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL 128
E+ +P++ ++ +I + ++A+++F+ M + GC ++ L+ Y + G L
Sbjct: 381 EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKL 440
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
E + LL+ M QP+ +T +IL+++ ++ ++ M +G+KP+ VT+NT
Sbjct: 441 EESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNT 500
Query: 189 LIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA 248
L AY + E ++ + +P+V T + + + G+++ R + + +
Sbjct: 501 LAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL 560
Query: 249 GIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQM 308
G+ PN+ FN L+ + +D + V++ M+++ +VT++ +++A+ GD+++
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 309 EYLFRLM 315
E ++ M
Sbjct: 621 EEIYTDM 627
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 108/225 (48%), Gaps = 3/225 (1%)
Query: 92 QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTY 151
+P++A +F +++EG +YT L++A +R SL+ +++ G +PD +
Sbjct: 334 RPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN-GLKPDTILF 392
Query: 152 SILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA 211
+ +I + E D+ + M G KP T+NTLI YGK + E L ML
Sbjct: 393 NAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLR 452
Query: 212 DRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK-GHDY 270
D QP+ T N ++A+ N +I+ K Q+ G++P+V TFN L +Y + G
Sbjct: 453 DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTC 512
Query: 271 KKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ-MEYLFRL 314
++ M + T +++ + + G +++ + + +R+
Sbjct: 513 TAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 153/331 (46%), Gaps = 46/331 (13%)
Query: 23 AIIDKRRKKGPINSKKLLPRTVL--EALHERVTALRWESALKVFELLREQLWYRPNSGVY 80
++I K K G L P T+L ++ + + A+K+FE ++E +P + +
Sbjct: 375 SLISKVEKNG------LKPDTILFNAIINASSESGNLDQAMKIFEKMKES-GCKPTASTF 427
Query: 81 IKLIVMLGKCKQPEKALELFQAMV-DEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
LI GK + E++ L M+ DE + + L+ A+ +E A++++ +M+
Sbjct: 428 NTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQ 487
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHG-IKPNTVTYNTLIDAY---GK 195
S G +PDV T++ L K+ + + + ++ +H +KPN T T+++ Y GK
Sbjct: 488 SY-GVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGK 546
Query: 196 ---AKRF--------------------------SEMEST--LVEMLADRDCQPDVWTMNS 224
A RF ++M+ +V+++ + +PDV T ++
Sbjct: 547 MEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFST 606
Query: 225 TLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYH 284
+ A+ ++G + E Y GI P++ F+IL Y + + +K ++ M+K+
Sbjct: 607 LMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFG 666
Query: 285 YSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+V Y +I + AG++++ +++ M
Sbjct: 667 VRPNVVIYTQIISGWCSAGEMKKAMQVYKKM 697
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 2/209 (0%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+ E AL+ F ++E L PN V+ LI + E+ M + G D ++
Sbjct: 546 KMEEALRFFYRMKE-LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
+ L++A+S G ++R + +M G PD+ +SIL K +K + +L+ M
Sbjct: 605 STLMNAWSSVGDMKRCEEIYTDMLEG-GIDPDIHAFSILAKGYARAGEPEKAEQILNQMR 663
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G++PN V Y +I + A + +M P++ T + + FG Q
Sbjct: 664 KFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQP 723
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSY 264
E + + P +T ++ D +
Sbjct: 724 WKAEELLKDMEGKNVVPTRKTMQLIADGW 752
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
DV++ + L+ +E + + + + G KP+ +TY TL+ A + K F + S L
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLS-L 376
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
+ + +PD N+ + A G +D + ++K + +G +P TFN L+ YGK
Sbjct: 377 ISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 267 GHDYKKMSAVMEYM 280
++ S +++ M
Sbjct: 437 IGKLEESSRLLDMM 450
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 120/275 (43%), Gaps = 38/275 (13%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+P+ Y +I L K +P+ AL L M D Y ++ + ++ AF
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFA-FDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L +M+ T G +PDV TY+ LI SCL + + LLSDM I P+ V +N LIDA
Sbjct: 272 LFNKME-TKGIKPDVFTYNPLI-SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAF-------------------GNLG 233
+ K + E E EM+ + C PDV N+ ++ F G +G
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 234 QI----------------DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM 277
D + + + + G+ P++ T+NILLD + + V
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 278 EYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
EYMQK IVTY +I+A KAG ++ LF
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLF 484
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 9/294 (3%)
Query: 27 KRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLR--EQLWYRPNSGVYIKLI 84
+ +KG I + ++ T+++ L +++ F+L E +P+ Y LI
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGL------CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLI 292
Query: 85 VMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGC 144
L + A L M+++ D + AL+ A+ + G L A L +EM + C
Sbjct: 293 SCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 145 QPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMES 204
PDV Y+ LIK + ++ + +M+ G+ NTVTY TLI + +A+ +
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 205 TLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY 264
+M++D PD+ T N L N G ++T ++ Q ++ ++ T+ ++++
Sbjct: 413 VFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471
Query: 265 GKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
K + + + +VTY ++ F + G ++ + LF M+ +
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKED 525
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 107/247 (43%), Gaps = 3/247 (1%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y P+ L+ + +A+ L MV+ G D ++T L+ +
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A +L+E M GCQPD+ TY +I + D LL+ M I+ + V YNT+
Sbjct: 198 EAVALVERM-VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
ID K K + L + + +PDV+T N + N G+ R
Sbjct: 257 IDGLCKYKHMDD-AFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW-TIVTYNIVIDAFGKAGDLQQM 308
I P++ FN L+D++ K + + + M K + + +V YN +I F K +++
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 309 EYLFRLM 315
+FR M
Sbjct: 376 MEVFREM 382
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 103/223 (46%), Gaps = 2/223 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y LI K K+ E+ +E+F+ M G V + +YT L+ + ++ + A +
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
++M S G PD+ TY+IL+ + + M +K + VTY T+I+A
Sbjct: 414 FKQMVS-DGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
KA + + L+ + +P+V T + + F G + + + + + G PN
Sbjct: 473 KAGKVEDGWDLFCS-LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
T+N L+ + + D + +++ M+ ++ T+ +V +
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTN 574
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 93/225 (41%), Gaps = 2/225 (0%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+ A+ LF MV ++ LLSA ++ + SL E+M++ G ++ TYSI
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNL-GISHNLYTYSI 115
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
I +L M G P+ VT N+L++ + R SE LV+ + +
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE-AVALVDQMVEM 174
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
QPD T + + + ++ G QP++ T+ +++ K +
Sbjct: 175 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 234
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
++ M+K +V YN +ID K + LF M ++
Sbjct: 235 LNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 4/178 (2%)
Query: 128 LERAFSLLEEM-KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTY 186
L+ A L +M KS P P + +S L+ + ++ FD V L M GI N TY
Sbjct: 56 LDDAIGLFGDMVKSRP--FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 113
Query: 187 NTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQ 246
+ I+ + + + S + L +M+ P + T+NS L F + +I D+
Sbjct: 114 SIFINYFCRRSQLSLALAILGKMMK-LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 172
Query: 247 TAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
G QP+ TF L+ + + + A++E M +VTY VI+ K G+
Sbjct: 173 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGE 230
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 129/286 (45%), Gaps = 6/286 (2%)
Query: 27 KRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVM 86
K+ +KG I + ++ T+++ L + + AL +F + + RP+ Y LI
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYK---HMDDALNLFTEMDNK-GIRPDVFTYSSLISC 302
Query: 87 LGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
L + A L M++ + +++AL+ A+ + G L A L +EM P
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDP 361
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
D+ TYS LI D+ + + M PN VTY+TLI + KAKR E
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
EM + R + T + + F D + + + + G+ PN+ T+NILLD K
Sbjct: 422 REM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCK 480
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
K V EY+Q+ I TYNI+I+ KAG ++ LF
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 124/283 (43%), Gaps = 37/283 (13%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
++ Y+P++ + LI L + +A+ L MV GC D +Y +++ + G ++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 130 RAFSLLEEMK----------------------------------STPGCQPDVQTYSILI 155
A SLL++M+ G +PDV TYS LI
Sbjct: 241 LALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 156 KSCLEVFA-FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
SCL + + LLSDM I PN VT++ LIDA+ K + E E EM+ R
Sbjct: 301 -SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK-RS 358
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
PD++T +S + F ++D + ++ + PNV T++ L+ + K ++
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+ M + VTY +I F +A D + +F+ M S
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS 461
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 111/249 (44%), Gaps = 2/249 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y P+ L+ K+ A+ L MV+ G D ++T L+
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A +L+++M GCQPD+ TY ++ + D LL M I+ + V YNT+
Sbjct: 206 EAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTI 264
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
ID K K + + EM ++ +PDV+T +S + N G+ R
Sbjct: 265 IDGLCKYKHMDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK 323
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I PNV TF+ L+D++ K + + + M K I TY+ +I+ F L + +
Sbjct: 324 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 310 YLFRLMRSE 318
++F LM S+
Sbjct: 384 HMFELMISK 392
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 111/238 (46%), Gaps = 2/238 (0%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
+Y +I L K K + AL LF M ++G D +Y++L+S G A LL +M
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
P+V T+S LI + ++ + + L +M I P+ TY++LI+ + R
Sbjct: 320 IERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 378
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFN 258
E + + E++ +DC P+V T ++ ++ F +++ + + G+ N T+
Sbjct: 379 LDEAKH-MFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 259 ILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
L+ + + D V + M I+TYNI++D K G L + +F ++
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 127/295 (43%), Gaps = 7/295 (2%)
Query: 26 DKRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYR---PNSGVYIK 82
D R + +K+ P V + A E L E L +++ R P+ Y
Sbjct: 311 DASRLLSDMIERKINPNVV--TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LI + ++A +F+ M+ + C + +Y+ L+ + ++ +E L EM S
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREM-SQR 427
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G + TY+ LI + D Q + M G+ PN +TYN L+D K + ++
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK- 486
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
+ E L +PD++T N + G+++ + G+ PNV +N ++
Sbjct: 487 AMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMIS 546
Query: 263 SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+ + ++ ++++ M++ TYN +I A + GD + L + MRS
Sbjct: 547 GFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRS 601
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 98/222 (44%), Gaps = 2/222 (0%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+ A++LF MV + LLSA ++ E SL E+M+ T G D+ TYSI
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ-TLGISHDLYTYSI 123
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
I +L+ M G +P+ VT ++L++ Y +KR S+ LV+ + +
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD-AVALVDQMVEM 182
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
+PD +T + + + D+ G QP++ T+ +++ K D
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
++++ M+K +V YN +ID K + LF M
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 111/242 (45%), Gaps = 3/242 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R + A +FEL+ + + PN Y LI K K+ E+ +ELF+ M G V + +Y
Sbjct: 378 RLDEAKHMFELMISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
T L+ + ++ + A + ++M S G P++ TY+IL+ + K + +
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSV-GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
++P+ TYN +I+ KA + + L+ + P+V N+ + F G
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN-LSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+ + K + G PN T+N L+ + + D + + +++ M+ ++ T +V
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Query: 296 ID 297
+
Sbjct: 615 TN 616
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 4/205 (1%)
Query: 65 ELLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
EL RE Q N+ Y LI + + + A +F+ MV G + +Y LL
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 123 SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
++G L +A + E ++ + +PD+ TY+I+I+ + + L ++++ G+ PN
Sbjct: 479 CKNGKLAKAMVVFEYLQRST-MEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPN 537
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY 242
+ YNT+I + + E +S L +M D P+ T N+ +RA G +
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL-PNSGTYNTLIRARLRDGDREASAELI 596
Query: 243 DKFQTAGIQPNVQTFNILLDSYGKG 267
+ ++ G + T ++ + G
Sbjct: 597 KEMRSCGFAGDASTIGLVTNMLHDG 621
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 6/270 (2%)
Query: 43 TVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQA 102
T++++L E+ +AL V + ++ ++ RP+ Y LI L + +
Sbjct: 189 TIIDSLCEKGQV---NTALDVLKHMK-KMGIRPDVVTYNSLITRLFHSGTWGVSARILSD 244
Query: 103 MVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVF 162
M+ G D +++AL+ Y + G L A EM P++ TY+ LI
Sbjct: 245 MMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS-VNPNIVTYNSLINGLCIHG 303
Query: 163 AFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTM 222
D+ + +L+ + G PN VTYNTLI+ Y KAKR + L M D D +T
Sbjct: 304 LLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRD-GVDGDTFTY 362
Query: 223 NSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQK 282
N+ + + G+ E+ + + G+ P++ TFNILLD K +E +QK
Sbjct: 363 NTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQK 422
Query: 283 YHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
I+TYNI+I KA ++ YLF
Sbjct: 423 SKTVVGIITYNIIIKGLCKADKVEDAWYLF 452
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 107/248 (43%), Gaps = 2/248 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L + P+ + L+ + +A+ L +V G + Y ++ + G +
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A +L+ MK G +PDV TY+ LI + +LSDM GI P+ +T++ L
Sbjct: 202 TALDVLKHMKKM-GIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSAL 260
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
ID YGK + E + EM+ R P++ T NS + G +D ++ + + G
Sbjct: 261 IDVYGKEGQLLEAKKQYNEMI-QRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKG 319
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
PN T+N L++ Y K ++ M + TYN + + +AG E
Sbjct: 320 FFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAE 379
Query: 310 YLFRLMRS 317
+ M S
Sbjct: 380 KVLGRMVS 387
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 121/273 (44%), Gaps = 3/273 (1%)
Query: 46 EALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVD 105
E L + ++++ AL +F + E P+ + +L++ + K + E + LF+ +
Sbjct: 49 ERLRSGLHSIKFNDALTLFCDMAES-HPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEM 107
Query: 106 EGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFD 165
G D S+T L+ + R L A S L +M G +P + T+ L+ V F
Sbjct: 108 LGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKL-GFEPSIVTFGSLVNGFCHVNRFY 166
Query: 166 KVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNST 225
+ L+ + G +PN V YNT+ID+ + + + L M +PDV T NS
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHM-KKMGIRPDVVTYNSL 225
Query: 226 LRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHY 285
+ + G R GI P+V TF+ L+D YGK + M +
Sbjct: 226 ITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285
Query: 286 SWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ IVTYN +I+ G L + + + ++ S+
Sbjct: 286 NPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSK 318
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 6/245 (2%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ P+ Y LI L + +AL LF + +G + Y L+ S G++ A
Sbjct: 352 FVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAA 411
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L EM S G P+VQT++IL+ ++ GL+ M G P+ T+N LI
Sbjct: 412 QLANEM-SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 193 YGKAKRFSEMESTL--VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
Y + ME+ L ++++ D PDV+T NS L + + + Y G
Sbjct: 471 YSTQLK---MENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGC 527
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEY 310
PN+ TFNILL+S + + ++E M+ + VT+ +ID F K GDL
Sbjct: 528 APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYT 587
Query: 311 LFRLM 315
LFR M
Sbjct: 588 LFRKM 592
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 118/243 (48%), Gaps = 3/243 (1%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+PN +Y LI L +A +L M ++G + + +++ L++ + G + A
Sbjct: 388 KPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADG 447
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L++ M S G PD+ T++ILI + +L M +G+ P+ TYN+L++
Sbjct: 448 LVKVMISK-GYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGL 506
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
K +F ++ T M+ ++ C P+++T N L + ++D ++ + + P+
Sbjct: 507 CKTSKFEDVMETYKTMV-EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPD 565
Query: 254 VQTFNILLDSYGKGHDYKKMSAVMEYMQK-YHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
TF L+D + K D + M++ Y S + TYNI+I AF + ++ E LF
Sbjct: 566 AVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLF 625
Query: 313 RLM 315
+ M
Sbjct: 626 QEM 628
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 99/216 (45%), Gaps = 4/216 (1%)
Query: 48 LHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEG 107
+H T L+ E+AL++ +++ + P+ Y L+ L K + E +E ++ MV++G
Sbjct: 468 IHGYSTQLKMENALEILDVMLDN-GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 108 CVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKV 167
C + ++ LL + R L+ A LLEEMK+ PD T+ LI + D
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS-VNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 168 QGLLSDMA-IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTL 226
L M + + +T TYN +I A+ + + E EM+ DR PD +T +
Sbjct: 586 YTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMV-DRCLGPDGYTYRLMV 644
Query: 227 RAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
F G ++ + + G P++ T +++
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVIN 680
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 2/263 (0%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
++E+ +V +RE + GVY+ + G+ + ++A+ +F+ M C SY
Sbjct: 55 KFEAMEEVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSY 114
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
A++S SG ++A + M+ G PDV +++I +KS + LL++M+
Sbjct: 115 NAIMSVLVDSGYFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMS 173
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G + N V Y T++ + + +E +MLA + T N LR G +
Sbjct: 174 SQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS-GVSLCLSTFNKLLRVLCKKGDV 232
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
E+ DK G+ PN+ T+N+ + + + ++ + + ++TYN +
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 296 IDAFGKAGDLQQMEYLFRLMRSE 318
I K Q+ E M +E
Sbjct: 293 IYGLCKNSKFQEAEVYLGKMVNE 315
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 108/238 (45%), Gaps = 5/238 (2%)
Query: 81 IKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKS 140
++++ G K+ EK L+ ++ G + + +Y + + G L+ A ++ +
Sbjct: 223 LRVLCKKGDVKECEKLLD---KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 141 TPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS 200
G +PDV TY+ LI + F + + L M G++P++ TYNTLI Y K
Sbjct: 280 Q-GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
E + + + + PD +T S + + G+ + +++ GI+PNV +N L
Sbjct: 339 LAERIVGDAVFN-GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTL 397
Query: 261 LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ + + + M + + T+NI+++ K G + + L ++M S+
Sbjct: 398 IKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK 455
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 97/255 (38%), Gaps = 40/255 (15%)
Query: 89 KC-KQPEKALELFQAM---------------------------VDEGCVVDCES------ 114
KC K P KALE+F +M E +VD
Sbjct: 15 KCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHM 74
Query: 115 ----YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
Y + Y R G ++ A ++ E M C+P V +Y+ ++ ++ FD+ +
Sbjct: 75 LEGVYVGAMKNYGRKGKVQEAVNVFERMDFYD-CEPTVFSYNAIMSVLVDSGYFDQAHKV 133
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
M GI P+ ++ + ++ K R L+ ++ + C+ +V + + F
Sbjct: 134 YMRMRDRGITPDVYSFTIRMKSFCKTSR-PHAALRLLNNMSSQGCEMNVVAYCTVVGGFY 192
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
+ K +G+ + TFN LL K D K+ +++ + K +
Sbjct: 193 EENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLF 252
Query: 291 TYNIVIDAFGKAGDL 305
TYN+ I + G+L
Sbjct: 253 TYNLFIQGLCQRGEL 267
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 115/257 (44%), Gaps = 3/257 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R A F+ + E+ RPN Y L+ L + A L M+ + + +Y
Sbjct: 205 RVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY 263
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
+ALL A+ ++G + A L EEM PD+ TYS LI D+ + M
Sbjct: 264 SALLDAFVKNGKVLEAKELFEEMVRMS-IDPDIVTYSSLINGLCLHDRIDEANQMFDLMV 322
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G + V+YNTLI+ + KAKR + EM + R + T N+ ++ F G +
Sbjct: 323 SKGCLADVVSYNTLINGFCKAKRVEDGMKLFREM-SQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
D + + + GI P++ T+NILL + +K + E MQK IVTY V
Sbjct: 382 DKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTV 441
Query: 296 IDAFGKAGDLQQMEYLF 312
I K G +++ LF
Sbjct: 442 IRGMCKTGKVEEAWSLF 458
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 114/247 (46%), Gaps = 2/247 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
++ Y+P+ Y +I L K K+ A + F+ + +G + +YTAL++ S
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A LL +M P+V TYS L+ + ++ + + L +M I P+ VTY++L
Sbjct: 243 DAARLLSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
I+ R E + + +++ + C DV + N+ + F +++ + + + G
Sbjct: 302 INGLCLHDRIDE-ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
+ N T+N L+ + + D K M + S I TYNI++ G+L++
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 310 YLFRLMR 316
+F M+
Sbjct: 421 VIFEDMQ 427
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 2/220 (0%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
A++LF MV + LLSA + + SL ++M+ G + D+ T++I+I
Sbjct: 69 AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKME-VLGIRNDLYTFNIVI 127
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
F +L M G +P+ VT +L++ + + R S+ S LV+ + +
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS-LVDKMVEIGY 186
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
+PD+ N+ + + +++ + + + GI+PNV T+ L++ + +
Sbjct: 187 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 246
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
++ M K + ++TY+ ++DAF K G + + + LF M
Sbjct: 247 LLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 95/212 (44%), Gaps = 8/212 (3%)
Query: 47 ALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDE 106
LH+R+ + A ++F+L+ + + Y LI K K+ E ++LF+ M
Sbjct: 306 CLHDRI-----DEANQMFDLMVSK-GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQR 359
Query: 107 GCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDK 166
G V + +Y L+ + ++G +++A +M G PD+ TY+IL+ + +K
Sbjct: 360 GLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 167 VQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTL 226
+ DM + + VTY T+I K + E S L+ + +PD+ T + +
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS-LSLKGLKPDIVTYTTMM 477
Query: 227 RAFGNLGQIDTMERCYDKFQTAGIQPNVQTFN 258
G + +E Y K + G+ N T +
Sbjct: 478 SGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS 509
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 6/275 (2%)
Query: 48 LHERV--TALRWESALKVFELLREQLWYRPNSGV--YIKLIVMLGKCKQPEKALELFQAM 103
L ER+ T LR +L + + RP + + +L+ + K K+ + + L + M
Sbjct: 52 LRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKM 111
Query: 104 VDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFA 163
G D ++ +++ + + A S+L +M G +PD T L+
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKL-GYEPDRVTIGSLVNGFCRRNR 170
Query: 164 FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMN 223
L+ M G KP+ V YN +ID+ K KR ++ E + + +P+V T
Sbjct: 171 VSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE-IERKGIRPNVVTYT 229
Query: 224 STLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKY 283
+ + N + R I PNV T++ LLD++ K + + E M +
Sbjct: 230 ALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
Query: 284 HYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
IVTY+ +I+ + + +F LM S+
Sbjct: 290 SIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 9/283 (3%)
Query: 40 LPRTVLEALHERVTALR-WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALE 98
LPR ++ R L+ W ++ E LR Q W+ + ++ LI GK A
Sbjct: 101 LPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAER 160
Query: 99 LFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSC 158
+ + G + SYTAL+ +Y R G A ++ M+S+ G +P TY I++K+
Sbjct: 161 VLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS-GPEPSAITYQIILKTF 219
Query: 159 LEVFAFDKVQGL---LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
+E F + + + L D +KP+ Y+ +I Y KA + + M+
Sbjct: 220 VEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVP 279
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
Q V T NS + + ++ + YD+ Q + IQP+V ++ +L+ +YG+ ++ +
Sbjct: 280 QSTV-TYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALS 335
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
V E M T YNI++DAF +G ++Q + +F+ MR +
Sbjct: 336 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 7/252 (2%)
Query: 52 VTALRWESALKVFELL--REQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCV 109
V +++ A +VFE L ++ +P+ +Y +I M K EKA ++F +MV +G
Sbjct: 220 VEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVP 279
Query: 110 VDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQG 169
+Y +L+S + + + + ++ QPDV +Y++LIK+ ++
Sbjct: 280 QSTVTYNSLMSFETSYKEVSKIYDQMQR----SDIQPDVVSYALLIKAYGRARREEEALS 335
Query: 170 LLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAF 229
+ +M G++P YN L+DA+ + + ++ M DR PD+W+ + L A+
Sbjct: 336 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR-IFPDLWSYTTMLSAY 394
Query: 230 GNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI 289
N ++ E+ + + + G +PN+ T+ L+ Y K +D +KM V E M+
Sbjct: 395 VNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQ 454
Query: 290 VTYNIVIDAFGK 301
++DA G+
Sbjct: 455 TILTTIMDASGR 466
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 54 ALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE 113
A R E AL VFE + + RP Y L+ E+A +F++M + D
Sbjct: 327 ARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 385
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
SYT +LSAY + +E A + +K G +P++ TY LIK + +K+ +
Sbjct: 386 SYTTMLSAYVNASDMEGAEKFFKRIK-VDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 444
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFS-------EMES 204
M + GIK N T++DA G+ K F EMES
Sbjct: 445 MRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 482
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 135/283 (47%), Gaps = 9/283 (3%)
Query: 40 LPRTVLEALHERVTALR-WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALE 98
LPR ++ R L+ W ++ E LR Q W+ + ++ LI GK A
Sbjct: 108 LPRDLVLGTLVRFKQLKKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAER 167
Query: 99 LFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSC 158
+ + G + SYTAL+ +Y R G A ++ M+S+ G +P TY I++K+
Sbjct: 168 VLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS-GPEPSAITYQIILKTF 226
Query: 159 LEVFAFDKVQGL---LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
+E F + + + L D +KP+ Y+ +I Y KA + + M+
Sbjct: 227 VEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVP 286
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
Q V T NS + + ++ + YD+ Q + IQP+V ++ +L+ +YG+ ++ +
Sbjct: 287 QSTV-TYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALS 342
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
V E M T YNI++DAF +G ++Q + +F+ MR +
Sbjct: 343 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 7/252 (2%)
Query: 52 VTALRWESALKVFELL--REQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCV 109
V +++ A +VFE L ++ +P+ +Y +I M K EKA ++F +MV +G
Sbjct: 227 VEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVP 286
Query: 110 VDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQG 169
+Y +L+S + + + + ++ QPDV +Y++LIK+ ++
Sbjct: 287 QSTVTYNSLMSFETSYKEVSKIYDQMQR----SDIQPDVVSYALLIKAYGRARREEEALS 342
Query: 170 LLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAF 229
+ +M G++P YN L+DA+ + + ++ M DR PD+W+ + L A+
Sbjct: 343 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR-IFPDLWSYTTMLSAY 401
Query: 230 GNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI 289
N ++ E+ + + + G +PN+ T+ L+ Y K +D +KM V E M+
Sbjct: 402 VNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQ 461
Query: 290 VTYNIVIDAFGK 301
++DA G+
Sbjct: 462 TILTTIMDASGR 473
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 54 ALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE 113
A R E AL VFE + + RP Y L+ E+A +F++M + D
Sbjct: 334 ARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 392
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
SYT +LSAY + +E A + +K G +P++ TY LIK + +K+ +
Sbjct: 393 SYTTMLSAYVNASDMEGAEKFFKRIK-VDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 451
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFS-------EMES 204
M + GIK N T++DA G+ K F EMES
Sbjct: 452 MRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMES 489
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 133/328 (40%), Gaps = 85/328 (25%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E A K F +RE + PN Y LI K K+ A ELF+ M+ EGC+ + +Y+A
Sbjct: 535 EQARKWFNEMRE-VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSA 593
Query: 118 LLSAYSRSGLLERAFSLLEEM---KSTP-------------------------------- 142
L+ + ++G +E+A + E M K P
Sbjct: 594 LIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSH 653
Query: 143 ---------------GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYN 187
GC+P+ Y LI +V D+ Q + ++M+ HG TY+
Sbjct: 654 RVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYS 713
Query: 188 TLIDAYGKAKR----------------------FSEM------------ESTLVEMLADR 213
+LID Y K KR ++EM L++M+ ++
Sbjct: 714 SLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEK 773
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
CQP+V T + + FG +G+I+T ++ + G+ PN T+ +L+D K
Sbjct: 774 GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVA 833
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
++E M++ H+ Y VI+ F K
Sbjct: 834 HNLLEEMKQTHWPTHTAGYRKVIEGFNK 861
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 110/232 (47%), Gaps = 18/232 (7%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
EKA + + M+ +G + D +Y+ +L+ + +E AF L EEMK G DV TY+I
Sbjct: 465 EKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG-GLVADVYTYTI 523
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
++ S + ++ + ++M G PN VTY LI AY KAK+ S + L E +
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS-YANELFETMLSE 582
Query: 214 DCQPDVWTMNSTLRAFGNLGQID----TMER-C-----------YDKFQTAGIQPNVQTF 257
C P++ T ++ + GQ++ ER C + ++ +PNV T+
Sbjct: 583 GCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTY 642
Query: 258 NILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
LLD + K H ++ +++ M + Y+ +ID K G L + +
Sbjct: 643 GALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 694
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 127/299 (42%), Gaps = 23/299 (7%)
Query: 34 INSKKLLPRTVL--EALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIV------ 85
+ ++ +P TV + + A +E A+ +R PN Y L+
Sbjct: 293 VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKK 351
Query: 86 MLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQ 145
LG+CK+ + M+ EGC + + +L+ AY SG A+ LL++M G
Sbjct: 352 QLGRCKR------VLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKC-GHM 404
Query: 146 PDVQTYSILI------KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
P Y+ILI K L D + S+M G+ N + ++ A ++
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY 464
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
+ S + EM+ + PD T + L N +++ +++ + G+ +V T+ I
Sbjct: 465 EKAFSVIREMIG-QGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTI 523
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
++DS+ K ++ M++ + +VTY +I A+ KA + LF M SE
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSE 582
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 11/236 (4%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+ + A K+ +++ E+ +PN Y +I G + E LEL + M +G + +Y
Sbjct: 759 KTDEAYKLMQMMEEK-GCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVF--AFDKVQGLLSD 173
L+ ++G L+ A +LLEEMK Q T++ + +E F F + GLL +
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMK-----QTHWPTHTAGYRKVIEGFNKEFIESLGLLDE 872
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVW--TMNSTLRAFGN 231
+ P Y LID KA+R EM L+E +A + T NS + +
Sbjct: 873 IGQDDTAPFLSVYRLLIDNLIKAQRL-EMALRLLEEVATFSATLVDYSSTYNSLIESLCL 931
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW 287
+++T + + + G+ P +Q+F L+ + + +++++ W
Sbjct: 932 ANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQW 987
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 125/274 (45%), Gaps = 14/274 (5%)
Query: 34 INSKKLLPRTVLEAL----HERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGK 89
I + ++ TV+++L HE + AL +F + E RPN Y LI L
Sbjct: 249 IEANVVIYSTVIDSLCKYRHE-------DDALNLFTEM-ENKGVRPNVITYSSLISCLCN 300
Query: 90 CKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQ 149
+ A L M++ + +++AL+ A+ + G L +A L EEM P++
Sbjct: 301 YGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS-IDPNIF 359
Query: 150 TYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEM 209
TYS LI + + + +L M PN VTYNTLI+ + KAKR + EM
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREM 419
Query: 210 LADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHD 269
+ R + T + + F D + + + + G+ PN+ T+NILLD K
Sbjct: 420 -SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 270 YKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
K V EY+Q+ I TYNI+I+ KAG
Sbjct: 479 LAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 125/246 (50%), Gaps = 2/246 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
++ Y+P++ + LI L + +A+ L MV GC D +Y A+++ + G +
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTD 235
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A +LL +M++ + +V YS +I S + D L ++M G++PN +TY++L
Sbjct: 236 LALNLLNKMEAAK-IEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
I R+S+ L +M+ +R P++ T ++ + AF G++ E+ Y++
Sbjct: 295 ISCLCNYGRWSDASRLLSDMI-ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRS 353
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I PN+ T++ L++ + + ++E M + +VTYN +I+ F KA + +
Sbjct: 354 IDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGM 413
Query: 310 YLFRLM 315
LFR M
Sbjct: 414 ELFREM 419
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 2/241 (0%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
N +Y +I L K + + AL LF M ++G + +Y++L+S G A LL
Sbjct: 252 NVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLL 311
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+M P++ T+S LI + ++ K + L +M I PN TY++LI+ +
Sbjct: 312 SDMIERK-INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCM 370
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
R E + L E++ +DC P+V T N+ + F ++D + + G+ N
Sbjct: 371 LDRLGEAKQML-ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV 429
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
T+ L+ + + D V + M I+TYNI++D K G L + +F +
Sbjct: 430 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Query: 316 R 316
+
Sbjct: 490 Q 490
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 106/246 (43%), Gaps = 2/246 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y P+ L+ + A+ L MV+ G D ++T L+
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A +L++ M GCQPD+ TY ++ + D LL+ M I+ N V Y+T+
Sbjct: 201 EAVALIDRMVQR-GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
ID+ K + + + EM ++ +P+V T +S + N G+ R
Sbjct: 260 IDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I PN+ TF+ L+D++ K K + E M K I TY+ +I+ F L + +
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 310 YLFRLM 315
+ LM
Sbjct: 379 QMLELM 384
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 101/216 (46%), Gaps = 3/216 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
RW A ++ + E+ PN + LI K + KA +L++ M+ + +Y
Sbjct: 303 RWSDASRLLSDMIER-KINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
++L++ + L A +LE M C P+V TY+ LI + DK L +M+
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKD-CLPNVVTYNTLINGFCKAKRVDKGMELFREMS 420
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G+ NTVTY TLI + +A+ + +M++ P++ T N L G++
Sbjct: 421 QRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-VGVHPNILTYNILLDGLCKNGKL 479
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYK 271
++ Q + ++P++ T+NI+++ K +K
Sbjct: 480 AKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 128/310 (41%), Gaps = 48/310 (15%)
Query: 46 EALHERVTALRWESALKVFELLREQLWYRPNSGV--YIKLIVMLGKCKQPEKALELFQAM 103
E L ++ + + A+ +F ++ + RP + + KL+ + K + + + + M
Sbjct: 48 EVLRTGLSDIELDDAIGLFGVMAQS---RPFPSIIEFSKLLSAIAKMNKFDLVISFGEKM 104
Query: 104 VDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFA 163
G + +Y L++ + R L A +LL +M G +PD+ T + L+
Sbjct: 105 EILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKL-GYEPDIVTLNSLLNGFCHGNR 163
Query: 164 FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMN 223
L+ M G KP+TVT+ TLI + SE L++ + R CQPD+ T
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASE-AVALIDRMVQRGCQPDLVTYG 222
Query: 224 STLRAFGNLGQIDTMERCYDKFQTA----------------------------------- 248
+ + G D +K + A
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 249 GIQPNVQTFNILLD---SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
G++PNV T++ L+ +YG+ D S ++ M + + +VT++ +IDAF K G L
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSD---ASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 306 QQMEYLFRLM 315
+ E L+ M
Sbjct: 340 VKAEKLYEEM 349
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 2/230 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y P++ + LI L + +A+ L MV+ GC D +Y ++++ RSG
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A LL +M+ + DV TYS +I S D L +M GIK + VTYN+L
Sbjct: 211 LALDLLRKMEER-NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSL 269
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
+ KA ++++ L +M++ R+ P+V T N L F G++ Y + T G
Sbjct: 270 VRGLCKAGKWNDGALLLKDMVS-REIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
I PN+ T+N L+D Y + + + +++ M + S IVT+ +I +
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 120/309 (38%), Gaps = 72/309 (23%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+P+ Y ++ + + AL+L + M + D +Y+ ++ + R G ++ A S
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 134 LLEEMKSTPGCQPDVQTYSILIKS-C------------------------------LEVF 162
L +EM+ T G + V TY+ L++ C L+VF
Sbjct: 250 LFKEME-TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVF 308
Query: 163 A----FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
+ L +M GI PN +TYNTL+D Y R SE + +++++ C PD
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSE-ANNMLDLMVRNKCSPD 367
Query: 219 VWTMNSTLRA-----------------------------------FGNLGQIDTMERCYD 243
+ T S ++ F G+I E +
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 244 KFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
+ + G+ P+V T+ ILLD +K + E +QK IV Y +I+ K G
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487
Query: 304 DLQQMEYLF 312
++ LF
Sbjct: 488 KVEDAWNLF 496
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 130/272 (47%), Gaps = 7/272 (2%)
Query: 46 EALHERVTALRWESALKVFELLREQLWYRPNSGV--YIKLIVMLGKCKQPEKALELFQAM 103
E L + ++ + A+ +F+ E + RP + + + + + KQ L+ + +
Sbjct: 58 ERLRSGIVDIKKDDAIALFQ---EMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQL 114
Query: 104 VDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFA 163
G + + +++ + R A+S+L ++ G +PD T++ LIK
Sbjct: 115 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKL-GYEPDTTTFNTLIKGLFLEGK 173
Query: 164 FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMN 223
+ L+ M +G +P+ VTYN++++ ++ S + L+ + +R+ + DV+T +
Sbjct: 174 VSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS-LALDLLRKMEERNVKADVFTYS 232
Query: 224 STLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKY 283
+ + + G ID + + +T GI+ +V T+N L+ K + + +++ M
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 284 HYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
++T+N+++D F K G LQ+ L++ M
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEM 324
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/278 (21%), Positives = 113/278 (40%), Gaps = 37/278 (13%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN + L+ + K + ++A EL++ M+ G + +Y L+ Y L A ++
Sbjct: 296 PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNM 355
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L+ M C PD+ T++ LIK V D + +++ G+ N VTY+ L+ +
Sbjct: 356 LDLMVRNK-CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFC 414
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA------ 248
++ + E EM++ PDV T L + G+++ ++ Q +
Sbjct: 415 QSGKIKLAEELFQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 249 -----------------------------GIQPNVQTFNILLDSYGKGHDYKKMSAVMEY 279
G++PNV T+ +++ K + + ++
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 280 MQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
M++ + TYN +I A + GDL L M+S
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKS 571
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 8/226 (3%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ + LI K+ + +++F+ + G V + +Y+ L+ + +SG ++ A L
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+EM S G PDV TY IL+ + +K + D+ + V Y T+I+
Sbjct: 426 FQEMVS-HGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWT---MNSTLRAFGNLGQIDTMERCYDKFQTAGIQ 251
K + + + L + +P+V T M S L G+L + + + R K + G
Sbjct: 485 KGGKVEDAWNLFCS-LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLR---KMEEDGNA 540
Query: 252 PNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
PN T+N L+ ++ + D + ++E M+ +S + +VID
Sbjct: 541 PNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 91/200 (45%), Gaps = 8/200 (4%)
Query: 124 RSGLLE----RAFSLLEEM-KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHG 178
RSG+++ A +L +EM +S P P + +S + F+ V + ++G
Sbjct: 61 RSGIVDIKKDDAIALFQEMIRSRP--LPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNG 118
Query: 179 IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTM 238
I N T N +I+ + + + S L +++ +PD T N+ ++ G++
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMK-LGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 239 ERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
D+ G QP+V T+N +++ + D ++ M++ + + TY+ +ID+
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 299 FGKAGDLQQMEYLFRLMRSE 318
+ G + LF+ M ++
Sbjct: 238 LCRDGCIDAAISLFKEMETK 257
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 42/190 (22%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R + +KVF + ++ N+ Y L+ + + + A ELFQ MV G + D +Y
Sbjct: 383 RVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 116 TALLSAYSRSGLLERAFSLLEEMK--------------------------------STP- 142
LL +G LE+A + E+++ S P
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 143 -GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY-------G 194
G +P+V TY+++I + + + LL M G PN TYNTLI A+
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTA 561
Query: 195 KAKRFSEMES 204
AK EM+S
Sbjct: 562 SAKLIEEMKS 571
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 119/243 (48%), Gaps = 3/243 (1%)
Query: 69 EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL 128
E+ +PN Y LI L + EKA EL M+++G + + +Y AL++ Y + G++
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
E A ++E M+S P+ +TY+ LIK + K G+L+ M + P+ VTYN+
Sbjct: 410 EDAVDVVELMESRK-LSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 189 LIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA 248
LID ++ F + L+ ++ DR PD WT S + + +++ +D +
Sbjct: 468 LIDGQCRSGNF-DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQK 526
Query: 249 GIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQM 308
G+ PNV + L+D Y K + ++E M + +T+N +I G L++
Sbjct: 527 GVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Query: 309 EYL 311
L
Sbjct: 587 TLL 589
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 131/294 (44%), Gaps = 35/294 (11%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
+SA KVF + + R N Y LI L ++ ++A++LF M D+ C +YT
Sbjct: 270 DSAFKVFNEMPLK-GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+ + S A +L++EM+ T G +P++ TY++LI S F+K + LL M
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEET-GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK 387
Query: 178 GIKPNTVTYNTLIDAYGK---------------AKRFSEMESTLVEMLA----------- 211
G+ PN +TYN LI+ Y K +++ S T E++
Sbjct: 388 GLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAM 447
Query: 212 -------DRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY 264
+R PDV T NS + G D+ R G+ P+ T+ ++DS
Sbjct: 448 GVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSL 507
Query: 265 GKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
K ++ + + +++ + +V Y +ID + KAG + + + M S+
Sbjct: 508 CKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 137/303 (45%), Gaps = 23/303 (7%)
Query: 34 INSKKLLPR--TVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCK 91
+N + L+P T + + R E A +F+ L EQ PN +Y LI K
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL-EQKGVNPNVVMYTALIDGYCKAG 546
Query: 92 QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTY 151
+ ++A + + M+ + C+ + ++ AL+ G L+ A +LLEE G QP V T
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEEKMVKIGLQPTVSTD 605
Query: 152 SILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA 211
+ILI L+ FD M G KP+ TY T I Y + R + E + +M
Sbjct: 606 TILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKM-R 664
Query: 212 DRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF-----NILLDSYGK 266
+ PD++T +S ++ +G+LGQ + + + G +P+ TF ++L YGK
Sbjct: 665 ENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGK 724
Query: 267 GHDYKK----MSAVMEY---------MQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFR 313
+ MS +ME+ M ++ + +Y +I + G+L+ E +F
Sbjct: 725 QKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFD 784
Query: 314 LMR 316
M+
Sbjct: 785 HMQ 787
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 119/265 (44%), Gaps = 9/265 (3%)
Query: 60 ALKVFELLRE-------QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDC 112
AL V +L R+ +L Y+ G Y L+ L + ++ +++ M+++ +
Sbjct: 159 ALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNI 218
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
+Y +++ Y + G +E A + ++ G PD TY+ LI + D + +
Sbjct: 219 YTYNKMVNGYCKLGNVEEANQYVSKIVEA-GLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
+M + G + N V Y LI A+R E V+M D +C P V T +++
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM-KDDECFPTVRTYTVLIKSLCGS 336
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
+ + + GI+PN+ T+ +L+DS ++K ++ M + ++TY
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 293 NIVIDAFGKAGDLQQMEYLFRLMRS 317
N +I+ + K G ++ + LM S
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMES 421
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 104/260 (40%), Gaps = 19/260 (7%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+P++ Y I + + A ++ M + G D +Y++L+ Y G AF
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEV------------------FAFDKVQGLLSDMA 175
+L+ M+ T GC+P T+ LIK LE+ FD V LL M
Sbjct: 694 VLKRMRDT-GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
H + PN +Y LI + E M + P N+ L L +
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+ + D G P +++ +L+ K + ++ ++V + + + Y + + I+
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872
Query: 296 IDAFGKAGDLQQMEYLFRLM 315
ID GK G ++ LF +M
Sbjct: 873 IDGVGKQGLVEAFYELFNVM 892
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 123/246 (50%), Gaps = 2/246 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
++ Y+P+S + LI L + + +A+ L MV +GC D +Y +++ + G ++
Sbjct: 179 EMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDID 238
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A SLL++M+ +P V Y+ +I + + L ++M GI+PN VTYN+L
Sbjct: 239 LALSLLKKMEQGK-IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 297
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
I R+S+ L +M+ +R P+V T ++ + AF G++ E+ YD+
Sbjct: 298 IRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 356
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I P++ T++ L++ + + + E M +VTYN +I F KA + +
Sbjct: 357 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGM 416
Query: 310 YLFRLM 315
LFR M
Sbjct: 417 ELFREM 422
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 127/286 (44%), Gaps = 6/286 (2%)
Query: 27 KRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVM 86
K+ ++G I ++ T+++AL AL +F + + RPN Y LI
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNV---NDALNLFTEMDNK-GIRPNVVTYNSLIRC 300
Query: 87 LGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
L + A L M++ + +++AL+ A+ + G L A L +EM P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS-IDP 359
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
D+ TYS LI D+ + + M PN VTYNTLI + KAKR E
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
EM + R + T + + F + D + + + + G+ P++ T++ILLD
Sbjct: 420 REM-SQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+ V EY+Q+ I TYNI+I+ KAG ++ LF
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 111/249 (44%), Gaps = 2/249 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y P+ L+ + A+ L MV+ G D ++ L+ R
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A +L++ M GCQPD+ TY I++ + D LL M I+P V YNT+
Sbjct: 204 EAVALVDRM-VVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
IDA K ++ + EM ++ +P+V T NS +R N G+ R
Sbjct: 263 IDALCNYKNVNDALNLFTEM-DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I PNV TF+ L+D++ K + + + M K I TY+ +I+ F L + +
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 310 YLFRLMRSE 318
++F LM S+
Sbjct: 382 HMFELMISK 390
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 125/263 (47%), Gaps = 3/263 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
RW A ++ + E+ PN + LI K + +A +L+ M+ D +Y
Sbjct: 306 RWSDASRLLSDMIER-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
++L++ + L+ A + E M S C P+V TY+ LIK + D+ L +M+
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G+ NTVTY TLI + +A+ + +M++D PD+ T + L N G++
Sbjct: 424 QRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD-GVLPDIMTYSILLDGLCNNGKV 482
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+T ++ Q + ++P++ T+NI+++ K + + + +VTY +
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 296 IDAFGKAGDLQQMEYLFRLMRSE 318
+ F + G ++ + LFR M+ E
Sbjct: 543 MSGFCRKGLKEEADALFREMKEE 565
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 110/249 (44%), Gaps = 5/249 (2%)
Query: 70 QLWYRPNSGV---YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSG 126
W R SGV Y K+ + + + A+ LF MV ++ LLSA ++
Sbjct: 36 SFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMN 95
Query: 127 LLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTY 186
+ SL E+M++ G ++ TYSILI +L+ M G +P+ VT
Sbjct: 96 KFDLVISLGEQMQNL-GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTL 154
Query: 187 NTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQ 246
N+L++ + R S+ S LV + + QPD +T N+ + + D+
Sbjct: 155 NSLLNGFCHGNRISDAVS-LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMV 213
Query: 247 TAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
G QP++ T+ I+++ K D ++++ M++ +V YN +IDA ++
Sbjct: 214 VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVN 273
Query: 307 QMEYLFRLM 315
LF M
Sbjct: 274 DALNLFTEM 282
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 125/297 (42%), Gaps = 11/297 (3%)
Query: 26 DKRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYR---PNSGVYIK 82
D R + +K+ P V + A E L E L +++ R P+ Y
Sbjct: 309 DASRLLSDMIERKINPNVV--TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LI + ++A +F+ M+ + C + +Y L+ + ++ ++ L EM S
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREM-SQR 425
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G + TY+ LI + D Q + M G+ P+ +TY+ L+D + +
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGK---V 482
Query: 203 ESTLV--EMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
E+ LV E L +PD++T N + G+++ + G++PNV T+ +
Sbjct: 483 ETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 542
Query: 261 LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+ + + ++ A+ M++ TYN +I A + GD L R MRS
Sbjct: 543 MSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 110/242 (45%), Gaps = 3/242 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R + A +FEL+ + + PN Y LI K K+ ++ +ELF+ M G V + +Y
Sbjct: 376 RLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
T L+ + ++ + A + ++M S G PD+ TYSIL+ + + +
Sbjct: 435 TTLIHGFFQARECDNAQIVFKQMVSD-GVLPDIMTYSILLDGLCNNGKVETALVVFEYLQ 493
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
++P+ TYN +I+ KA + + L+ + +P+V T + + F G
Sbjct: 494 RSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS-LSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+ + + + + G P+ T+N L+ ++ + D + ++ M+ + T +V
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 612
Query: 296 ID 297
+
Sbjct: 613 TN 614
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A+++F+ + E+ R ++ Y L+ L + A L + MV V + ++TA++
Sbjct: 193 AVELFDRM-ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGC-QPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHG 178
+ + G A L EEM T C PDV TY+ LI D+ + +L M G
Sbjct: 252 DVFVKEGKFSEAMKLYEEM--TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 179 IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTM 238
P+ VTYNTLI+ + K+KR E EM A R D T N+ ++ + G+ D
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREM-AQRGLVGDTITYNTIIQGYFQAGRPDAA 368
Query: 239 ERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYK--KMSAVMEYMQKYHYSWTIVTYNIVI 296
+ + + + +PN++T++ILL YG +++ K + E MQK I TYNIVI
Sbjct: 369 QEIFSRMDS---RPNIRTYSILL--YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVI 423
Query: 297 DAFGKAGDLQQMEYLFR 313
K G+++ LFR
Sbjct: 424 HGMCKIGNVEDAWDLFR 440
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 2/248 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+ Y P+ LI + + A++L M + G D Y ++ + GL+
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A L + M+ G + D TY+ L+ + L+ DM + I PN +T+ +
Sbjct: 192 DAVELFDRMERD-GVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAV 250
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
ID + K +FSE L E + R PDV+T NS + G++D ++ D T G
Sbjct: 251 IDVFVKEGKFSE-AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKG 309
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
P+V T+N L++ + K + + + M + +TYN +I + +AG +
Sbjct: 310 CLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ 369
Query: 310 YLFRLMRS 317
+F M S
Sbjct: 370 EIFSRMDS 377
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 111/260 (42%), Gaps = 37/260 (14%)
Query: 56 RWESALKVFELLREQLWYR--PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE 113
RW A + L+R+ + PN + +I + K + +A++L++ M D
Sbjct: 224 RWSDAAR---LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVF 280
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y +L++ G ++ A +L+ M T GC PDV TY+ LI + D+ L +
Sbjct: 281 TYNSLINGLCMHGRVDEAKQMLDLM-VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKR-------FSEMES---------------------- 204
MA G+ +T+TYNT+I Y +A R FS M+S
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEK 399
Query: 205 --TLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
L E + + + D+ T N + +G ++ + G++P+V ++ ++
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459
Query: 263 SYGKGHDYKKMSAVMEYMQK 282
+ + + K + MQ+
Sbjct: 460 GFCRKRQWDKSDLLYRKMQE 479
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 124/265 (46%), Gaps = 7/265 (2%)
Query: 56 RWESALKVFELLREQLWYR--PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE 113
+W+ K +LRE + P+ + LI + K + +A EL+ M+ G D
Sbjct: 295 KWDDGAK---MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTI 351
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y +L+ + + L A + + M S GC+PD+ TYSILI S + D L +
Sbjct: 352 TYNSLIDGFCKENCLHEANQMFDLMVS-KGCEPDIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
++ G+ PNT+TYNTL+ + ++ + + + EM++ R P V T L + G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDGLCDNG 469
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
+++ ++K Q + + + +NI++ ++ + +VTYN
Sbjct: 470 ELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYN 529
Query: 294 IVIDAFGKAGDLQQMEYLFRLMRSE 318
++I K G L + + LFR M+ +
Sbjct: 530 VMIGGLCKKGSLSEADMLFRKMKED 554
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 116/248 (46%), Gaps = 8/248 (3%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
++P+ Y ++ L K AL+LF+ M + Y+ ++ + + G + A
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
SL EM+ G + DV TYS LI +D +L +M I P+ VT++ LID
Sbjct: 266 SLFNEME-MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDV 324
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
+ K + E + EM+ R PD T NS + F + + +D + G +P
Sbjct: 325 FVKEGKLLEAKELYNEMIT-RGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEP 383
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI---VTYNIVIDAFGKAGDLQQME 309
++ T++IL++SY K K++ M ++ I +TYN ++ F ++G L +
Sbjct: 384 DIVTYSILINSYCKA---KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 310 YLFRLMRS 317
LF+ M S
Sbjct: 441 ELFQEMVS 448
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 113/224 (50%), Gaps = 2/224 (0%)
Query: 95 KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSIL 154
+AL L MV+ G D +Y +L+ +SG A L +M+ + V YSI+
Sbjct: 193 EALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEER-NIKASVVQYSIV 251
Query: 155 IKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
I S + +FD L ++M + GIK + VTY++LI ++ + L EM+ R+
Sbjct: 252 IDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG-RN 310
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
PDV T ++ + F G++ + Y++ T GI P+ T+N L+D + K + + +
Sbjct: 311 IIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEAN 370
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ + M IVTY+I+I+++ KA + LFR + S+
Sbjct: 371 QMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK 414
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 113/259 (43%), Gaps = 39/259 (15%)
Query: 75 PNSGVYIKLIVMLGKCKQP--EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
P++ Y LI G CK+ +A ++F MV +GC D +Y+ L+++Y ++ ++
Sbjct: 348 PDTITYNSLID--GFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L E+ S+ G P+ TY+ L+ + + + L +M G+ P+ VTY L+D
Sbjct: 406 RLFREI-SSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 193 Y---GKAKR----FSEMESTLVEM---------------------------LADRDCQPD 218
G+ + F +M+ + + + L+D+ +PD
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 219 VWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVME 278
V T N + G + + + K + G P+ T+NIL+ ++ G ++E
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIE 584
Query: 279 YMQKYHYSWTIVTYNIVID 297
M+ +S T +VID
Sbjct: 585 EMKVCGFSADSSTIKMVID 603
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 105/224 (46%), Gaps = 10/224 (4%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
A++LF++M+ + + L SA +R+ + + M+ G + D+ T +I+I
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN-GIEHDMYTMTIMI 112
Query: 156 KS-CLE---VFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA 211
C + +FAF +L G +P+T+T++TL++ + R SE LV+ +
Sbjct: 113 NCYCRKKKLLFAF----SVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE-AVALVDRMV 167
Query: 212 DRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYK 271
+ +PD+ T+++ + G++ D+ G QP+ T+ +L+ K +
Sbjct: 168 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSA 227
Query: 272 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ M++ + ++V Y+IVID+ K G LF M
Sbjct: 228 LALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 111/271 (40%), Gaps = 5/271 (1%)
Query: 46 EALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVD 105
E L + ++ A+ +FE + Q P + +L + + KQ + L + M
Sbjct: 40 ERLRNGIVDIKVNDAIDLFESMI-QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMEL 98
Query: 106 EGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS-CLEVFAF 164
G D + T +++ Y R L AFS+L G +PD T+S L+ CLE
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKL-GYEPDTITFSTLVNGFCLEGRVS 157
Query: 165 DKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNS 224
+ V L+ M +P+ VT +TLI+ R SE L++ + + QPD T
Sbjct: 158 EAV-ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSE-ALVLIDRMVEYGFQPDEVTYGP 215
Query: 225 TLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYH 284
L G + K + I+ +V ++I++DS K + ++ M+
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 285 YSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+VTY+ +I G + R M
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 117/227 (51%), Gaps = 1/227 (0%)
Query: 81 IKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKS 140
I+++++ G E A +LF M + C +S+ ALLSAY S L+ A +E+
Sbjct: 126 IRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPE 185
Query: 141 TPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS 200
G PD+ TY+ +IK+ + D + + ++ +G +P+ +++NTL++ + + + F
Sbjct: 186 KLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFV 245
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
E + + +++ ++ P++ + NS +R + D +T GI P+V T+N L
Sbjct: 246 EGDR-IWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNAL 304
Query: 261 LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+ +Y ++ +++ M++ + VTY ++I K GDL +
Sbjct: 305 ITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDR 351
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 138/329 (41%), Gaps = 68/329 (20%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
W+ +L + + + E+ Y P+ Y ++ + + KQ + A LF M D +Y+
Sbjct: 135 WQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYS 194
Query: 117 ALLSAYSRSGLLERAFSLLEEMKST----------------------------------P 142
L++++ + G+ + A S L++M+
Sbjct: 195 TLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRS 254
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G PD+ Y+ +I + F + + L+ +M G+ PNTV+Y+TL+ Y + +F E
Sbjct: 255 GITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA 314
Query: 203 ESTLVEML--------------------------ADR--------DCQPDVWTMNSTLRA 228
S EM ADR D +P+V + N+ LR
Sbjct: 315 LSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRV 374
Query: 229 FGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWT 288
+G + Q I+ NV T+N ++ YGK +++K + +++ MQ
Sbjct: 375 YGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPN 434
Query: 289 IVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+TY+ +I +GKAG L + LF+ +RS
Sbjct: 435 AITYSTIISIWGKAGKLDRAATLFQKLRS 463
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 98/233 (42%), Gaps = 34/233 (14%)
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
++S SR +R+ +LL+ + P V Y++++++ L FD GL +M
Sbjct: 125 MVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQR 184
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR------------------------ 213
+ P+ TY+TLI ++GK F S L +M DR
Sbjct: 185 ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKA 244
Query: 214 ----------DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS 263
PD+ NS + +G + AG+ PN +++ LL
Sbjct: 245 ISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSV 304
Query: 264 YGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
Y + H + + +V M++ + + + T NI+ID +G+ +++ + LF +R
Sbjct: 305 YVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLR 357
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 125/267 (46%), Gaps = 23/267 (8%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A+ +F L++ + N Y +I + GK + EKA L Q M G + +Y+ ++
Sbjct: 384 AIHLFRLMQRKD-IEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTII 442
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
S + ++G L+RA +L ++++S+ G + D Y +I + V + LL ++ +
Sbjct: 443 SIWGKAGKLDRAATLFQKLRSS-GVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKL--- 498
Query: 180 KPNTVTYNTLIDAYGKAKRFSE--------MESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
P+ + T I KA R E ES V+ ++ C ++++ N
Sbjct: 499 -PDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRY----- 552
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVT 291
++ +E ++K +TAG P+ ++L++YGK +++K V MQ+ +
Sbjct: 553 ---VNVIE-VFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEV 608
Query: 292 YNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ ++ + D + +E LF+ + S+
Sbjct: 609 HFQMLSLYSSKKDFEMVESLFQRLESD 635
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/244 (20%), Positives = 110/244 (45%), Gaps = 6/244 (2%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y ++ + G+ + +A+ LF+ M + + +Y ++ Y ++ E+A +L
Sbjct: 363 PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNL 422
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
++EM+S G +P+ TYS +I + D+ L + G++ + V Y T+I AY
Sbjct: 423 VQEMQSR-GIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYE 481
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+ + L E+ PD + + G+ + + + +G ++
Sbjct: 482 RVGLMGHAKRLLHELKL-----PDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDI 536
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
F +++ Y + Y + V E M+ Y +V++A+GK + ++ + ++R
Sbjct: 537 SVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYRE 596
Query: 315 MRSE 318
M+ E
Sbjct: 597 MQEE 600
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
++ YRP++ + LI L + +A+ L MV GC + +Y +++ + G ++
Sbjct: 108 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
Query: 130 RAFSLLEEMKS----------------------------------TPGCQPDVQTYSILI 155
AF+LL +M++ T G +P+V TYS LI
Sbjct: 168 LAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 227
Query: 156 KSCLEVFA-FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
SCL + + LLSDM I PN VT+N LIDA+ K +F E E +M+ R
Sbjct: 228 -SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK-RS 285
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
PD++T NS + F ++D ++ ++ + P++ T+N L+ + K + +
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ M VTY +I GD + +F+ M S+
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 389
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 120/284 (42%), Gaps = 7/284 (2%)
Query: 37 KKLLPRTVLEALHERVTALRWESALKVFELLREQLWYR---PNSGVYIKLIVMLGKCKQP 93
KK+ P V + + A E E L + + R P+ Y LI +
Sbjct: 249 KKINPNLV--TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+KA ++F+ MV + C D ++Y L+ + +S +E L EM S G D TY+
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTT 365
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
LI+ D Q + M G+ P+ +TY+ L+D + E + + +
Sbjct: 366 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL-EKALEVFDYMQKS 424
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
+ + D++ + + G++D + G++PNV T+N ++ ++
Sbjct: 425 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 484
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
A+++ M++ TYN +I A + GD L R MRS
Sbjct: 485 YALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 2/249 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y P+ L+ K+ A+ L MV+ G D ++T L+
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A +L++ M GCQP++ TY +++ + D LL+ M I+ + V +NT+
Sbjct: 133 EAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
ID+ K + + + EM + +P+V T +S + + G+ +
Sbjct: 192 IDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I PN+ TFN L+D++ K + + + + M K I TYN +I+ F L + +
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAK 310
Query: 310 YLFRLMRSE 318
+F M S+
Sbjct: 311 QMFEFMVSK 319
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 89/204 (43%), Gaps = 2/204 (0%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
+ LLSA ++ + SL E+M+ G ++ TY+ILI LL M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRL-GISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
G +P+ VT ++L++ Y KR S+ LV+ + + +PD T + + +
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISD-AVALVDQMVEMGYRPDTITFTTLIHGLFLHNK 130
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNI 294
D+ G QPN+ T+ ++++ K D ++ M+ +V +N
Sbjct: 131 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNT 190
Query: 295 VIDAFGKAGDLQQMEYLFRLMRSE 318
+ID+ K + LF+ M ++
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETK 214
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 78/169 (46%), Gaps = 3/169 (1%)
Query: 138 MKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAK 197
+KS P P + ++ L+ + ++ FD V L M GI N TYN LI+ + +
Sbjct: 2 VKSRP--LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 198 RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF 257
+ S + L +M+ +P + T++S L + + +I D+ G +P+ TF
Sbjct: 60 QISLALALLGKMMK-LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 118
Query: 258 NILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
L+ + + A+++ M + +VTY +V++ K GD+
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 167
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 123/253 (48%), Gaps = 3/253 (1%)
Query: 63 VFELLREQLWYRPNS--GVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLS 120
V E+L EQ YR S G ++I + GK E A ++F+ M + C S+ ALLS
Sbjct: 93 VEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLS 152
Query: 121 AYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIK 180
AY S + L E+ +PD+ +Y+ LIK+ E + + LL ++ G+K
Sbjct: 153 AYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLK 212
Query: 181 PNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMER 240
P+ VT+NTL+ + +F E +M+ +++ D+ T N+ L N + +
Sbjct: 213 PDIVTFNTLLLSSYLKGQFELGEEIWAKMV-EKNVAIDIRTYNARLLGLANEAKSKELVN 271
Query: 241 CYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 300
+ + + +G++P+V +FN ++ + A + + K+ Y T+ +++ A
Sbjct: 272 LFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMC 331
Query: 301 KAGDLQQMEYLFR 313
KAGD + LF+
Sbjct: 332 KAGDFESAIELFK 344
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 98 ELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS 157
E++ MV++ +D +Y A L + + +L E+K++ G +PDV +++ +I+
Sbjct: 236 EIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKAS-GLKPDVFSFNAMIRG 294
Query: 158 CLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
+ D+ + ++ HG +P+ T+ L+ A KA F E + R
Sbjct: 295 SINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKR 350
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 130/293 (44%), Gaps = 38/293 (12%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R++ A+ + + + + + PN +Y +I L K + ALE+F M +G D +Y
Sbjct: 164 RFQEAVSLVDSM-DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTY 222
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLE--------------- 160
L+S S SG A LL +M P+V ++ LI + ++
Sbjct: 223 NTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 161 -------VFAFDK------VQGLLSD-------MAIHGIKPNTVTYNTLIDAYGKAKRFS 200
VF ++ + G L D M G P+ VTYNTLI + K+KR
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
+ EM + D +T N+ + + G+++ ++ +++ G+ P++ T+NIL
Sbjct: 342 DGMKLFCEMTY-QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNIL 400
Query: 261 LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFR 313
LD +K ++E +QK I+TYNI+I + L++ LFR
Sbjct: 401 LDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFR 453
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 115/265 (43%), Gaps = 7/265 (2%)
Query: 56 RWESALKVFELLREQLWYR--PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE 113
RW A + LLR+ + + PN + LI K +A L++ M+ V +
Sbjct: 234 RWTDAAR---LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVF 290
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y +L++ + G L A + + M S GC PDV TY+ LI + + L +
Sbjct: 291 TYNSLINGFCIHGCLGDAKYMFDLMVS-KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCE 349
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M G+ + TYNTLI Y +A + + + M+ D PD+ T N L N G
Sbjct: 350 MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV-DCGVSPDIVTYNILLDCLCNNG 408
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
+I+ + Q + + ++ T+NI++ + K+ + + + + Y
Sbjct: 409 KIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYI 468
Query: 294 IVIDAFGKAGDLQQMEYLFRLMRSE 318
+I + G ++ + L R M+ +
Sbjct: 469 TMISGLCRKGLQREADKLCRRMKED 493
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 95/226 (42%), Gaps = 2/226 (0%)
Query: 90 CKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQ 149
C + + A LF M+ + +T +L+ ++ + L +M++ G D+
Sbjct: 57 CIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENL-GISHDLY 115
Query: 150 TYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEM 209
+++ILI LL M G +P+ VT +L++ + + RF E S LV+
Sbjct: 116 SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS-LVDS 174
Query: 210 LADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHD 269
+ P+V N+ + ++ + + GI+ + T+N L+
Sbjct: 175 MDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGR 234
Query: 270 YKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ + ++ M K ++ + +ID F K G+L + L++ M
Sbjct: 235 WTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 138/267 (51%), Gaps = 13/267 (4%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDE--GCVVDCE 113
++ AL FEL++ RP++ + +I L K Q +AL+LF +M ++ C D
Sbjct: 263 QYSKALSYFELMKGAK-VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 321
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQG---- 169
++T+++ YS G +E ++ E M + G +P++ +Y+ L+ + +A + G
Sbjct: 322 TFTSIMHLYSVKGEIENCRAVFEAMVAE-GLKPNIVSYNALMGA----YAVHGMSGTALS 376
Query: 170 LLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAF 229
+L D+ +GI P+ V+Y L+++YG++++ + + + M +R +P+V T N+ + A+
Sbjct: 377 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAY 435
Query: 230 GNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI 289
G+ G + + + + GI+PNV + LL + + + V+ Q +
Sbjct: 436 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNT 495
Query: 290 VTYNIVIDAFGKAGDLQQMEYLFRLMR 316
YN I ++ A +L++ L++ MR
Sbjct: 496 AAYNSAIGSYINAAELEKAIALYQSMR 522
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 7/272 (2%)
Query: 49 HERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGC 108
H R RW L + ++LR + P+ Y LI G +ALE+ + M D G
Sbjct: 188 HGRAGQWRWAMNL-MDDMLRAAI--APSRSTYNNLINACGSSGNWREALEVCKKMTDNGV 244
Query: 109 VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQ 168
D ++ +LSAY +A S E MK +PD T++I+I ++ +
Sbjct: 245 GPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK-VRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 169 GLLSDM--AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTL 226
L + M +P+ VT+ +++ Y + M+A+ +P++ + N+ +
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE-GLKPNIVSYNALM 362
Query: 227 RAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYS 286
A+ G T + GI P+V ++ LL+SYG+ K V M+K
Sbjct: 363 GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK 422
Query: 287 WTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+VTYN +IDA+G G L + +FR M +
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD 454
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 35/276 (12%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y L+ G+ +QP KA E+F M E + +Y AL+ AY +G L A +
Sbjct: 388 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 447
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+M+ G +P+V + L+ +C V +LS GI NT YN+ I +Y
Sbjct: 448 FRQMEQD-GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYI 506
Query: 195 KA--------------KRFSEMESTLVEMLADRDCQ----PDVWTM-------------- 222
A K+ + +S +L C+ P+ +
Sbjct: 507 NAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKE 566
Query: 223 --NSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYM 280
+S L A+ GQ+ E +++ + AG +P+V + +L +Y + K + M
Sbjct: 567 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 626
Query: 281 QKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ + + ++ AF K G + L LMR
Sbjct: 627 EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 662
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 43/304 (14%)
Query: 47 ALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKC---KQPEKALELFQAM 103
A+ + A E A+ +++ +R++ + +S + LI G C K PE A+ + M
Sbjct: 501 AIGSYINAAELEKAIALYQSMRKKK-VKADSVTFTILIS--GSCRMSKYPE-AISYLKEM 556
Query: 104 VDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFA 163
D + E Y+++L AYS+ G + A S+ +MK GC+PDV Y+ ++ +
Sbjct: 557 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK-MAGCEPDVIAYTSMLHAYNASEK 615
Query: 164 FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR----------------------FSE 201
+ K L +M +GI+P+++ + L+ A+ K + F E
Sbjct: 616 WGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFE 675
Query: 202 MEST------------LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
+ S L++M+ + N L FG G+++ M + + K +G
Sbjct: 676 IFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASG 735
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
+ N++T+ ILL+ +++K V+E+M + Y +I +FG+ + E
Sbjct: 736 VGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII-SFGERSAGIEFE 794
Query: 310 YLFR 313
L R
Sbjct: 795 PLIR 798
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
N+ Y I + EKA+ L+Q+M + D ++T L+S R A S L
Sbjct: 494 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL 553
Query: 136 EEMK--STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
+EM+ S P + + YS ++ + + + + + + M + G +P+ + Y +++ AY
Sbjct: 554 KEMEDLSIPLTK---EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
++++ + +EM A+ +PD ++ +RAF GQ + D + I
Sbjct: 611 NASEKWGKACELFLEMEAN-GIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFT 669
Query: 254 VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
F + + ++K+ +++ M Y S +I N ++ FGK+G ++ M LF
Sbjct: 670 GAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLF 728
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 115/258 (44%), Gaps = 15/258 (5%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALEL---FQAMVDEGCVVDCESYT 116
A+++F + EQ +PN + + +L C + +K + + A G ++ +Y
Sbjct: 444 AVEIFRQM-EQDGIKPN---VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 499
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
+ + +Y + LE+A +L + M+ + D T++ILI + + + L +M
Sbjct: 500 SAIGSYINAAELEKAIALYQSMRKKK-VKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
I Y++++ AY K + +E ES +M C+PDV S L A+ +
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKM-AGCEPDVIAYTSMLHAYNASEKWG 617
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ + + GI+P+ + L+ ++ KG + +M+ M++ +T + +
Sbjct: 618 KACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIF 677
Query: 297 DA------FGKAGDLQQM 308
A + +A DL QM
Sbjct: 678 SACNTLQEWKRAIDLIQM 695
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 66/163 (40%), Gaps = 9/163 (5%)
Query: 155 IKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
I+ C+ VF + K+Q YN +I + + + EM
Sbjct: 123 IELCVNVFKWMKIQ--------KNYCARNDIYNMMIRLHARHNWVDQARGLFFEM-QKWS 173
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
C+PD T ++ + A G GQ D A I P+ T+N L+++ G ++++
Sbjct: 174 CKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREAL 233
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
V + M +VT+NIV+ A+ + F LM+
Sbjct: 234 EVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKG 276
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 105/210 (50%), Gaps = 1/210 (0%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
E+AL + M +G + Y L+ AY++S +E L EM+ G +P TY+I
Sbjct: 361 EEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDK-GLKPSAATYNI 419
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
L+ + D V+ LL +M G++PN +Y LI AYG+ K+ S+M + +
Sbjct: 420 LMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKV 479
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
+P + + + A+ G + +++ GI+P+V+T+ +LD++ + D K+
Sbjct: 480 GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKL 539
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
+ + M + T +TYN ++D F K G
Sbjct: 540 MEIWKLMLREKIKGTRITYNTLLDGFAKQG 569
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 134/264 (50%), Gaps = 3/264 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R++ A +V+E + + Y N I + + + ++ E+F+ M ++G + +
Sbjct: 288 RYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVF 347
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
L+ ++ GL E A + EM+ G + + Y+ L+ + + ++V+GL ++M
Sbjct: 348 GGLVKSFCDEGLKEEALVIQTEMEKK-GIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR 406
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G+KP+ TYN L+DAY + + +E+ L EM D +P+V + + A+G ++
Sbjct: 407 DKGLKPSAATYNILMDAYARRMQPDIVETLLREM-EDLGLEPNVKSYTCLISAYGRTKKM 465
Query: 236 -DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNI 294
D + + + G++P+ ++ L+ +Y ++K A E M K ++ TY
Sbjct: 466 SDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTS 525
Query: 295 VIDAFGKAGDLQQMEYLFRLMRSE 318
V+DAF ++GD ++ +++LM E
Sbjct: 526 VLDAFRRSGDTGKLMEIWKLMLRE 549
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 143/301 (47%), Gaps = 9/301 (2%)
Query: 16 LRREATKAIIDKRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRP 75
L+ EA +I +K I S ++ T+++A ++ + E +F +R++ +P
Sbjct: 359 LKEEAL--VIQTEMEKKGIRSNTIVYNTLMDAYNK---SNHIEEVEGLFTEMRDK-GLKP 412
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSG-LLERAFSL 134
++ Y L+ + QP+ L + M D G + +SYT L+SAY R+ + + A
Sbjct: 413 SAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADA 472
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
MK G +P +Y+ LI + +K +M GIKP+ TY +++DA+
Sbjct: 473 FLRMKKV-GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFR 531
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
++ ++ ML ++ + T N+ L F G +F G+QP+V
Sbjct: 532 RSGDTGKLMEIWKLMLREK-IKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSV 590
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
T+N+L+++Y +G K+ +++ M + +TY+ +I AF + D ++ + ++
Sbjct: 591 MTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKM 650
Query: 315 M 315
M
Sbjct: 651 M 651
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 100/236 (42%), Gaps = 2/236 (0%)
Query: 81 IKLIVMLGKCKQPEKALELFQAM-VDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
++ +VM+G+ + L ++ M + E + + + L + R + + LL +
Sbjct: 206 VEALVMMGESGFVKSCLYFYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLP 265
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
+ DV+ Y+ I +D + M + P+ VT LI KA R
Sbjct: 266 DKEEFR-DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRS 324
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
++ + E ++++ + +++F + G + + + GI+ N +N
Sbjct: 325 AKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNT 384
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
L+D+Y K + +++ + M+ + TYNI++DA+ + +E L R M
Sbjct: 385 LMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREM 440
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 138/267 (51%), Gaps = 13/267 (4%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDE--GCVVDCE 113
++ AL FEL++ RP++ + +I L K Q +AL+LF +M ++ C D
Sbjct: 131 QYSKALSYFELMKGAK-VRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVV 189
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQG---- 169
++T+++ YS G +E ++ E M + G +P++ +Y+ L+ + +A + G
Sbjct: 190 TFTSIMHLYSVKGEIENCRAVFEAMVAE-GLKPNIVSYNALMGA----YAVHGMSGTALS 244
Query: 170 LLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAF 229
+L D+ +GI P+ V+Y L+++YG++++ + + + M +R +P+V T N+ + A+
Sbjct: 245 VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERR-KPNVVTYNALIDAY 303
Query: 230 GNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI 289
G+ G + + + + GI+PNV + LL + + + V+ Q +
Sbjct: 304 GSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNT 363
Query: 290 VTYNIVIDAFGKAGDLQQMEYLFRLMR 316
YN I ++ A +L++ L++ MR
Sbjct: 364 AAYNSAIGSYINAAELEKAIALYQSMR 390
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 121/272 (44%), Gaps = 7/272 (2%)
Query: 49 HERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGC 108
H R RW L + ++LR + P+ Y LI G +ALE+ + M D G
Sbjct: 56 HGRAGQWRWAMNL-MDDMLRAAI--APSRSTYNNLINACGSSGNWREALEVCKKMTDNGV 112
Query: 109 VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQ 168
D ++ +LSAY +A S E MK +PD T++I+I ++ +
Sbjct: 113 GPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAK-VRPDTTTFNIIIYCLSKLGQSSQAL 171
Query: 169 GLLSDM--AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTL 226
L + M +P+ VT+ +++ Y + M+A+ +P++ + N+ +
Sbjct: 172 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE-GLKPNIVSYNALM 230
Query: 227 RAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYS 286
A+ G T + GI P+V ++ LL+SYG+ K V M+K
Sbjct: 231 GAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRK 290
Query: 287 WTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+VTYN +IDA+G G L + +FR M +
Sbjct: 291 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQD 322
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 35/276 (12%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y L+ G+ +QP KA E+F M E + +Y AL+ AY +G L A +
Sbjct: 256 PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEI 315
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+M+ G +P+V + L+ +C V +LS GI NT YN+ I +Y
Sbjct: 316 FRQMEQD-GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYI 374
Query: 195 KA--------------KRFSEMESTLVEMLADRDCQ----PDVWTM-------------- 222
A K+ + +S +L C+ P+ +
Sbjct: 375 NAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKE 434
Query: 223 --NSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYM 280
+S L A+ GQ+ E +++ + AG +P+V + +L +Y + K + M
Sbjct: 435 VYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEM 494
Query: 281 QKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ + + ++ AF K G + L LMR
Sbjct: 495 EANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR 530
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 135/304 (44%), Gaps = 43/304 (14%)
Query: 47 ALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKC---KQPEKALELFQAM 103
A+ + A E A+ +++ +R++ + +S + LI G C K PE A+ + M
Sbjct: 369 AIGSYINAAELEKAIALYQSMRKKK-VKADSVTFTILIS--GSCRMSKYPE-AISYLKEM 424
Query: 104 VDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFA 163
D + E Y+++L AYS+ G + A S+ +MK GC+PDV Y+ ++ +
Sbjct: 425 EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMK-MAGCEPDVIAYTSMLHAYNASEK 483
Query: 164 FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR----------------------FSE 201
+ K L +M +GI+P+++ + L+ A+ K + F E
Sbjct: 484 WGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFE 543
Query: 202 MEST------------LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
+ S L++M+ + N L FG G+++ M + + K +G
Sbjct: 544 IFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASG 603
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
+ N++T+ ILL+ +++K V+E+M + Y +I +FG+ + E
Sbjct: 604 VGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDII-SFGERSAGIEFE 662
Query: 310 YLFR 313
L R
Sbjct: 663 PLIR 666
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 110/239 (46%), Gaps = 6/239 (2%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
N+ Y I + EKA+ L+Q+M + D ++T L+S R A S L
Sbjct: 362 NTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYL 421
Query: 136 EEMK--STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
+EM+ S P + + YS ++ + + + + + + M + G +P+ + Y +++ AY
Sbjct: 422 KEMEDLSIPLTK---EVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 478
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
++++ + +EM A+ +PD ++ +RAF GQ + D + I
Sbjct: 479 NASEKWGKACELFLEMEAN-GIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFT 537
Query: 254 VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
F + + ++K+ +++ M Y S +I N ++ FGK+G ++ M LF
Sbjct: 538 GAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLF 596
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 4/206 (1%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
Y ++ ++R +++A L EM+ C+PD +TY LI + + L+ DM
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKW-SCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
I P+ TYN LI+A G + + E +M D PD+ T N L A+ + Q
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKM-TDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW--TIVTY 292
++ + A ++P+ TFNI++ K + + M++ +VT+
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 293 NIVIDAFGKAGDLQQMEYLFRLMRSE 318
++ + G+++ +F M +E
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAE 217
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/258 (21%), Positives = 115/258 (44%), Gaps = 15/258 (5%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALEL---FQAMVDEGCVVDCESYT 116
A+++F + EQ +PN + + +L C + +K + + A G ++ +Y
Sbjct: 312 AVEIFRQM-EQDGIKPN---VVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 367
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
+ + +Y + LE+A +L + M+ + D T++ILI + + + L +M
Sbjct: 368 SAIGSYINAAELEKAIALYQSMRKKK-VKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
I Y++++ AY K + +E ES +M C+PDV S L A+ +
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKM-AGCEPDVIAYTSMLHAYNASEKWG 485
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ + + GI+P+ + L+ ++ KG + +M+ M++ +T + +
Sbjct: 486 KACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIF 545
Query: 297 DA------FGKAGDLQQM 308
A + +A DL QM
Sbjct: 546 SACNTLQEWKRAIDLIQM 563
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 132/250 (52%), Gaps = 8/250 (3%)
Query: 62 KVFELLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
K F+LL E + + PN +Y LI K + EKA +LF M G V + +YT L+
Sbjct: 181 KSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI 240
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS-CLEVFAFDKVQGLLSDMAIHG 178
+ ++G+ ++ F + E+M+ G P++ TY+ ++ C + D Q + +M G
Sbjct: 241 NGLFKNGVKKQGFEMYEKMQE-DGVFPNLYTYNCVMNQLCKDGRTKDAFQ-VFDEMRERG 298
Query: 179 IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID-T 237
+ N VTYNTLI + + +E + +M +D P++ T N+ + F +G++
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-GINPNLITYNTLIDGFCGVGKLGKA 357
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ C D ++ G+ P++ T+NIL+ + + D + +++ M++ + VTY I+ID
Sbjct: 358 LSLCRD-LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILID 416
Query: 298 AFGKAGDLQQ 307
F ++ ++++
Sbjct: 417 TFARSDNMEK 426
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L N Y LI L K ++ E+++ M ++G + +Y +++ + G +
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
AF + +EM+ G ++ TY+ LI ++ ++ M GI PN +TYNTL
Sbjct: 286 DAFQVFDEMRER-GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTL 344
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
ID + + + S L L R P + T N + F G + + + G
Sbjct: 345 IDGFCGVGKLGKALS-LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERG 403
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I+P+ T+ IL+D++ + + +K + M++ + TY+++I F G + +
Sbjct: 404 IKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEAS 463
Query: 310 YLFRLM 315
LF+ M
Sbjct: 464 RLFKSM 469
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 100/212 (47%), Gaps = 8/212 (3%)
Query: 109 VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQ 168
V+D S+ L+ +G +E++F LL E+ + G P+V Y+ LI C + +K +
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIEL-TEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 169 GLLSDMAIHGIKPNTVTYNTLIDAY---GKAKRFSEMESTLVEMLADRDCQPDVWTMNST 225
L +M G+ N TY LI+ G K+ EM E + + P+++T N
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEM----YEKMQEDGVFPNLYTYNCV 274
Query: 226 LRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHY 285
+ G+ + +D+ + G+ N+ T+N L+ + + + V++ M+
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 286 SWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+ ++TYN +ID F G L + L R ++S
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 116/261 (44%), Gaps = 5/261 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R + A +VF+ +RE+ N Y LI L + + +A ++ M +G + +Y
Sbjct: 283 RTKDAFQVFDEMRER-GVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
L+ + G L +A SL ++KS G P + TY+IL+ ++ +M
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSR-GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
GIKP+ VTY LID + ++ + + M + PDV T + + F GQ+
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSM-EELGLVPDVHTYSVLIHGFCIKGQM 459
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGK-GHDYKKMSAVMEYMQKYHYSWTIVTYNI 294
+ R + +PN +N ++ Y K G Y+ + + E M++ + + +Y
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE-MEEKELAPNVASYRY 518
Query: 295 VIDAFGKAGDLQQMEYLFRLM 315
+I+ K ++ E L M
Sbjct: 519 MIEVLCKERKSKEAERLVEKM 539
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 91/223 (40%), Gaps = 3/223 (1%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
++ F MVD G V + LL+ S + +S E KS DV ++ ILI
Sbjct: 113 SISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK--VVLDVYSFGILI 170
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
K C E +K LL ++ G PN V Y TLID K + + EM
Sbjct: 171 KGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM-GKLGL 229
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
+ T + G Y+K Q G+ PN+ T+N +++ K K
Sbjct: 230 VANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQ 289
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
V + M++ S IVTYN +I + L + + M+S+
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD 332
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 111/231 (48%), Gaps = 10/231 (4%)
Query: 79 VYIKLIVMLGKCK--QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLE 136
VY I++ G C+ + EK+ +L + + G + YT L+ + G +E+A L
Sbjct: 163 VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFF 222
Query: 137 EMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQG--LLSDMAIHGIKPNTVTYNTLIDAYG 194
EM G + +TY++LI + K QG + M G+ PN TYN +++
Sbjct: 223 EMGKL-GLVANERTYTVLINGLFKNGV--KKQGFEMYEKMQEDGVFPNLYTYNCVMNQLC 279
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
K R + EM +R ++ T N+ + +++ + D+ ++ GI PN+
Sbjct: 280 KDGRTKDAFQVFDEM-RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 255 QTFNILLDSY-GKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
T+N L+D + G G K +S + ++ S ++VTYNI++ F + GD
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRD-LKSRGLSPSLVTYNILVSGFCRKGD 388
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 110/254 (43%), Gaps = 23/254 (9%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
+++E ++E + PN Y ++ L K + + A ++F M + G + +Y L+
Sbjct: 252 GFEMYEKMQEDGVF-PNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLI 310
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
R L A ++++MKS G P++ TY+ LI V K L D+ G+
Sbjct: 311 GGLCREMKLNEANKVVDQMKS-DGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 180 KPNTVTYNTLI-------DAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
P+ VTYN L+ D G AK EME +R +P T + F
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEME--------ERGIKPSKVTYTILIDTFA-- 419
Query: 233 GQIDTMERCYD---KFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI 289
+ D ME+ + G+ P+V T+++L+ + + S + + M + +
Sbjct: 420 -RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 290 VTYNIVIDAFGKAG 303
V YN +I + K G
Sbjct: 479 VIYNTMILGYCKEG 492
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 4/187 (2%)
Query: 84 IVMLGKCKQPEK--ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKST 141
I++ G C++ + A ++ + M + G +YT L+ ++RS +E+A L M+
Sbjct: 378 ILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEEL 437
Query: 142 PGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
G PDV TYS+LI ++ L M +PN V YNT+I Y K
Sbjct: 438 -GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR 496
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
L EM +++ P+V + + + ER +K +GI P+ +++
Sbjct: 497 ALKLLKEM-EEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555
Query: 262 DSYGKGH 268
+ H
Sbjct: 556 RAKNDSH 562
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 123/246 (50%), Gaps = 2/246 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
++ Y+P++ + LI L + +A+ L MV GC D +Y +++ + G ++
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A +LL +M++ + +V ++ +I S + + L ++M GI+PN VTYN+L
Sbjct: 241 LALNLLNKMEAAR-IKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSL 299
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
I+ R+S+ L ML ++ P+V T N+ + AF G++ E+ +++
Sbjct: 300 INCLCNYGRWSDASRLLSNML-EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRS 358
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I P+ T+N+L++ + + + + ++M I TYN +I+ F K ++
Sbjct: 359 IDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGV 418
Query: 310 YLFRLM 315
LFR M
Sbjct: 419 ELFREM 424
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 111/249 (44%), Gaps = 2/249 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y P+ L+ K+ A+ L MV+ G D ++T L+
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A +L+++M GCQPD+ TY ++ + D LL+ M IK N V +NT+
Sbjct: 206 EAVALVDQMVQR-GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTI 264
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
ID+ K R E+ L + + +P+V T NS + N G+ R
Sbjct: 265 IDSLCKY-RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I PNV TFN L+D++ K + + E M + +TYN++I+ F L + +
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 310 YLFRLMRSE 318
+F+ M S+
Sbjct: 384 QMFKFMVSK 392
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 106/242 (43%), Gaps = 8/242 (3%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
RPN Y LI L + A L M+++ + ++ AL+ A+ + G L A
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L EEM PD TY++LI D+ + + M PN TYNTLI+ +
Sbjct: 350 LHEEMIQR-SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
K KR + EM + R + T + ++ F G D+ + + + + + +
Sbjct: 409 CKCKRVEDGVELFREM-SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 254 VQTFNILLD---SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEY 310
+ T++ILL SYGK + +Y+QK I YN +I+ KAG + +
Sbjct: 468 IMTYSILLHGLCSYGK---LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWD 524
Query: 311 LF 312
LF
Sbjct: 525 LF 526
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 97/244 (39%), Gaps = 35/244 (14%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+ A++LF MV + LLSA ++ E SL E+M+ T G D+ TYSI
Sbjct: 65 DDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQ-TLGISHDLYTYSI 123
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMES--------- 204
I +L+ M G +P+ VT ++L++ Y +KR S+ +
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 205 -------------------------TLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
LV+ + R CQPD+ T + + G ID
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 240 RCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
+K + A I+ NV FN ++DS K + + M+ +VTYN +I+
Sbjct: 244 NLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 300 GKAG 303
G
Sbjct: 304 CNYG 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 6/263 (2%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
RW A ++ + E+ PN + LI K + +A +L + M+ D +Y
Sbjct: 308 RWSDASRLLSNMLEK-KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
L++ + L+ A + + M S C P++QTY+ LI + + L +M+
Sbjct: 367 NLLINGFCMHNRLDEAKQMFKFMVS-KDCLPNIQTYNTLINGFCKCKRVEDGVELFREMS 425
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G+ NTVTY T+I + +A + +M+++R D+ T + L + G++
Sbjct: 426 QRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNR-VPTDIMTYSILLHGLCSYGKL 484
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
DT + Q + ++ N+ +N +++ K K+ + +VTYN +
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKA---GKVGEAWDLFCSLSIKPDVVTYNTM 541
Query: 296 IDAFGKAGDLQQMEYLFRLMRSE 318
I LQ+ + LFR M+ +
Sbjct: 542 ISGLCSKRLLQEADDLFRKMKED 564
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 98/223 (43%), Gaps = 5/223 (2%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y LI KCK+ E +ELF+ M G V + +YT ++ + ++G + A +
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
++M S D+ TYSIL+ D + + ++ N YNT+I+
Sbjct: 456 FKQMVSNR-VPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
KA + E ++ +PDV T N+ + + + + + K + G PN
Sbjct: 515 KAGKVGEAW----DLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNS 570
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
T+N L+ + + D + +++ M+ + T ++V +
Sbjct: 571 GTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTN 613
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 120/259 (46%), Gaps = 10/259 (3%)
Query: 62 KVFELLREQLWYRPNS---GVYIKLIVMLGKC--KQPEKALELFQAMVDEGCVVDCESYT 116
K LLRE R NS V+ V+ G C K+ EKALEL M GC ++
Sbjct: 160 KAVSLLREM---RRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
L+ A+ ++G ++ A L+EMK G + D+ Y+ LI+ + D+ + L ++
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFM-GLEADLVVYTSLIRGFCDCGELDRGKALFDEVLE 275
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
G P +TYNTLI + K + E S + E + +R +P+V+T + +G+
Sbjct: 276 RGDSPCAITYNTLIRGFCKLGQLKE-ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTK 334
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ + +PN T+NI+++ K ++E M+K +TYNI++
Sbjct: 335 EALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILL 394
Query: 297 DAFGKAGDLQQMEYLFRLM 315
GDL + L LM
Sbjct: 395 GGLCAKGDLDEASKLLYLM 413
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 109/240 (45%), Gaps = 4/240 (1%)
Query: 79 VYIKLIVMLGKCKQPE--KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLE 136
VY I++ G C+ E KA+ L + M + D SY ++ + LE+A L
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 137 EMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKA 196
EMK + GC + T+ ILI + + D+ G L +M G++ + V Y +LI +
Sbjct: 202 EMKGS-GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDC 260
Query: 197 KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQT 256
++ E+L +R P T N+ +R F LGQ+ ++ G++PNV T
Sbjct: 261 GELDRGKALFDEVL-ERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 257 FNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ L+D K+ ++ M + VTYNI+I+ K G + + LM+
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 48 LHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEG 107
+H R AL +++LL E+L I L L K KA+EL++ + D
Sbjct: 431 IHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTL-KAGDVNKAMELWKQISDSK 489
Query: 108 CVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKV 167
V + ++YTA++ + ++G+L A LL +M+ + QP V Y+ L+ S + + D+
Sbjct: 490 IVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE-LQPSVFDYNCLLSSLCKEGSLDQA 548
Query: 168 QGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLR 227
L +M P+ V++N +ID KA ES LV M + PD++T + +
Sbjct: 549 WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGM-SRAGLSPDLFTYSKLIN 607
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
F LG +D +DK +G +P+ + +L
Sbjct: 608 RFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVL 641
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 2/220 (0%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
A + M+ G + ++ LL R+ +A SLL EM+ PDV +Y+ +I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS-LMPDVFSYNTVI 184
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
+ E +K L ++M G + VT+ LIDA+ KA + E L EM
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM-KFMGL 243
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
+ D+ S +R F + G++D + +D+ G P T+N L+ + K K+ S
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ E+M + + TY +ID G ++ L LM
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 5/258 (1%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE--SYTA 117
A+++ EL++++ RP++ Y L+ L ++A +L M+ + D + SY A
Sbjct: 371 AVEIVELMKKR-RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNA 429
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+ + L +A + + + G V T +IL+ S L+ +K L ++
Sbjct: 430 LIHGLCKENRLHQALDIYDLLVEKLGAGDRVTT-NILLNSTLKAGDVNKAMELWKQISDS 488
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
I N+ TY +ID + K + + L +M + QP V+ N L + G +D
Sbjct: 489 KIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS-ELQPSVFDYNCLLSSLCKEGSLDQ 547
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
R +++ Q P+V +FNI++D K D K +++ M + S + TY+ +I+
Sbjct: 548 AWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Query: 298 AFGKAGDLQQMEYLFRLM 315
F K G L + F M
Sbjct: 608 RFLKLGYLDEAISFFDKM 625
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 102/245 (41%), Gaps = 6/245 (2%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P + Y LI K Q ++A E+F+ M++ G + +YT L+ G + A L
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 135 LEEMKSTPGCQPDVQTYSILI-KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L M +P+ TY+I+I K C + D V+ ++ M +P+ +TYN L+
Sbjct: 340 LNLMIEKDE-EPNAVTYNIIINKLCKDGLVADAVE-IVELMKKRRTRPDNITYNILLGGL 397
Query: 194 GKAKRFSEMESTLVEMLADRD-CQPDVWTMNSTLRAFGNLGQIDTMERCYDKF-QTAGIQ 251
E L ML D PDV + N+ + ++ YD + G
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457
Query: 252 PNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
V T NILL+S K D K + + + TY +ID F K G L + L
Sbjct: 458 DRVTT-NILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGL 516
Query: 312 FRLMR 316
MR
Sbjct: 517 LCKMR 521
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 35/276 (12%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+PNS +Y +I +L + + +A E F M+ +G + D YT L+ + + G + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
EM S PDV TY+ +I ++ + L +M G++P++VT+ LI+ Y
Sbjct: 373 FFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 194 GKAKRFSE------------------MESTLVEML---ADRDC-------------QPDV 219
KA + +TL++ L D D QP++
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 220 WTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEY 279
+T NS + G I+ + +F+ AG+ + T+ L+D+Y K + K +++
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 280 MQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
M TIVT+N++++ F G L+ E L M
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 2/244 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y LI L K + A EL M G + +Y ++++ +SG +E A L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+ E ++ G D TY+ L+ + + DK Q +L +M G++P VT+N L++ +
Sbjct: 514 VGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+ E L MLA + P+ T NS ++ + + Y + G+ P+
Sbjct: 573 LHGMLEDGEKLLNWMLA-KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
+T+ L+ + K + K+ + + M+ +S ++ TY+++I F K + +F
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 315 MRSE 318
MR E
Sbjct: 692 MRRE 695
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 10/240 (4%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGL-LERAFSLLEE 137
V+ +++V G ++ A +F+ M++ G V+ +S L+ S+ A + E
Sbjct: 180 VFFQVLVDFGLLRE---ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 138 MKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAK 197
C +V +Y+I+I ++ + LL M + G P+ ++Y+T+++ Y
Sbjct: 237 FPEVGVCW-NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC--- 292
Query: 198 RFSEMEST--LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
RF E++ L+E++ + +P+ + S + + ++ E + + GI P+
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ L+D + K D + S M + ++TY +I F + GD+ + LF M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 35/276 (12%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+PNS +Y +I +L + + +A E F M+ +G + D YT L+ + + G + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
EM S PDV TY+ +I ++ + L +M G++P++VT+ LI+ Y
Sbjct: 373 FFYEMHSRD-ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 431
Query: 194 GKAKRFSE------------------MESTLVEML---ADRDC-------------QPDV 219
KA + +TL++ L D D QP++
Sbjct: 432 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 491
Query: 220 WTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEY 279
+T NS + G I+ + +F+ AG+ + T+ L+D+Y K + K +++
Sbjct: 492 FTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE 551
Query: 280 MQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
M TIVT+N++++ F G L+ E L M
Sbjct: 552 MLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 113/244 (46%), Gaps = 2/244 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y LI L K + A EL M G + +Y ++++ +SG +E A L
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+ E ++ G D TY+ L+ + + DK Q +L +M G++P VT+N L++ +
Sbjct: 514 VGEFEAA-GLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+ E L MLA + P+ T NS ++ + + Y + G+ P+
Sbjct: 573 LHGMLEDGEKLLNWMLA-KGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDG 631
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
+T+ L+ + K + K+ + + M+ +S ++ TY+++I F K + +F
Sbjct: 632 KTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQ 691
Query: 315 MRSE 318
MR E
Sbjct: 692 MRRE 695
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 109/240 (45%), Gaps = 10/240 (4%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGL-LERAFSLLEE 137
V+ +++V G ++ A +F+ M++ G V+ +S L+ S+ A + E
Sbjct: 180 VFFQVLVDFGLLRE---ARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFRE 236
Query: 138 MKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAK 197
C +V +Y+I+I ++ + LL M + G P+ ++Y+T+++ Y
Sbjct: 237 FPEVGVCW-NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC--- 292
Query: 198 RFSEMEST--LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
RF E++ L+E++ + +P+ + S + + ++ E + + GI P+
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ L+D + K D + S M + ++TY +I F + GD+ + LF M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 121/264 (45%), Gaps = 1/264 (0%)
Query: 52 VTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVD 111
V A R E AL+ E + + + PN Y +I + E+A+EL + M +GC+ D
Sbjct: 288 VRANRLEKALRFLERM-QVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPD 346
Query: 112 CESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
SY ++ + + L+++M G PD TY+ LI + D+ L
Sbjct: 347 KVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFL 406
Query: 172 SDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
D G + + + Y+ ++ A K R SE + + EML+ C PDV T + + F
Sbjct: 407 KDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCR 466
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVT 291
LG++D ++ T G +PN ++ LL+ + + +M +++ +S +T
Sbjct: 467 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 292 YNIVIDAFGKAGDLQQMEYLFRLM 315
Y++++ + G L + + R M
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREM 550
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 120/295 (40%), Gaps = 37/295 (12%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
ALK F Q YR + VY ++ +L K K + + + M G E+++ ++
Sbjct: 190 ALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVM 249
Query: 120 SAYSRSG-----------------------------------LLERAFSLLEEMKSTPGC 144
+YSR+G LE+A LE M+ G
Sbjct: 250 VSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVV-GI 308
Query: 145 QPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMES 204
P+V TY+ +I+ ++ ++ LL DM G P+ V+Y T++ K KR E+
Sbjct: 309 VPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRD 368
Query: 205 TLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY 264
+ +M + PD T N+ + D Q G + + ++ ++ +
Sbjct: 369 LMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHAL 428
Query: 265 GK-GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
K G + + E + K H +VTY V++ F + G++ + + L ++M +
Sbjct: 429 CKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTH 483
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/303 (21%), Positives = 108/303 (35%), Gaps = 72/303 (23%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y LI ML K ++AL + ++G +D Y+A++ A + G + A L
Sbjct: 381 PDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDL 440
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKP------------- 181
+ EM S C PDV TY+ ++ + DK + LL M HG KP
Sbjct: 441 INEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMC 500
Query: 182 ----------------------NTVTYNTLIDAYGKAKRFSEMESTLVEMLA-------- 211
N++TY+ ++ + + SE + EM+
Sbjct: 501 RTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPV 560
Query: 212 --------------------------DRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKF 245
++ C +V + + F ++D D
Sbjct: 561 EINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDM 620
Query: 246 QTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF---GKA 302
+V T+ L+D+ GK + + +M+ M T VTY VI + GK
Sbjct: 621 YLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKV 680
Query: 303 GDL 305
DL
Sbjct: 681 DDL 683
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 2/172 (1%)
Query: 67 LREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSG 126
+ E+ W+ PNS Y ++ L + + +A ++ + MV +G LL + R G
Sbjct: 514 MSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDG 573
Query: 127 LLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTY 186
A +EE + GC +V ++ +I + D +L DM + + TY
Sbjct: 574 RTHEARKFMEECLNK-GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632
Query: 187 NTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTM 238
TL+D GK R +E + +ML + P T + + + +G++D +
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKML-HKGIDPTPVTYRTVIHRYCQMGKVDDL 683
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+A + + +++GC ++ ++T ++ + ++ L+ A S+L++M DV TY+
Sbjct: 576 HEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINK-HADVFTYTT 634
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
L+ + + + L+ M GI P VTY T+I Y + + ++ + L +M++ +
Sbjct: 635 LVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQ 694
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTM 238
C+ + L G L + DT+
Sbjct: 695 KCRTIYNQVIEKLCVLGKLEEADTL 719
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 127/254 (50%), Gaps = 6/254 (2%)
Query: 63 VFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
VF + E+ + N Y+ LI EKA+ ++ M++ GC D + Y AL+S
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 123 SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
+ A ++E++K G D+ Y++LI + +KV +L+DM G KP+
Sbjct: 522 CQVRRDHDAIRVVEKLKEG-GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPD 580
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY 242
++TYNTLI +GK K F +E + +M D P V T + + A+ ++G++D + +
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 243 -DKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
D + + PN +NIL++++ K ++ + ++ E M+ + TYN + F
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL---FKC 696
Query: 302 AGDLQQMEYLFRLM 315
+ Q E L +LM
Sbjct: 697 LNEKTQGETLLKLM 710
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 130/303 (42%), Gaps = 47/303 (15%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIK--------LIVMLGKCKQPEKALELFQAM-VDE 106
R + AL+VFE +R + R + G IK LI L K + ++A EL M ++E
Sbjct: 344 RVDEALEVFEQMRGK---RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 107 GCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDK 166
CV + +Y L+ Y R+G LE A ++ MK +P+V T + ++ +
Sbjct: 401 RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE-IKPNVVTVNTIVGGMCRHHGLNM 459
Query: 167 VQGLLSDMAIHGIKPNTVTYNTLIDA-------------YGK---------AKRFSEMES 204
DM G+K N VTY TLI A Y K AK + + S
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 205 TLVEMLADRDC------------QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
L ++ D D D+ N + F + + + + G +P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+ T+N L+ +GK D++ + +ME M++ T+ TY VIDA+ G+L + LF
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 313 RLM 315
+ M
Sbjct: 640 KDM 642
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 111/250 (44%), Gaps = 13/250 (5%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PNS + I L K + A ++ ++ ++ + ALLS R+ + R L
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 135 LEEMKSTPGCQPDVQTYSILIKS---------CLEVFAFDKVQGLLSDMAIHGIKPNTVT 185
+ +M +PDV T ILI + LEVF ++++G +D + IK +++
Sbjct: 317 VLKMDEVK-IRPDVVTLGILINTLCKSRRVDEALEVF--EQMRGKRTDDG-NVIKADSIH 372
Query: 186 YNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKF 245
+NTLID K R E E LV M + C P+ T N + + G+++T + +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 246 QTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
+ I+PNV T N ++ + H M+K +VTY +I A ++
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 306 QQMEYLFRLM 315
++ Y + M
Sbjct: 493 EKAMYWYEKM 502
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 59 SALKVFELLR--EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
+A KV+E+L E+ +P+S Y LI GK K E + + M ++G +Y
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYG 620
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
A++ AY G L+ A L ++M P+ Y+ILI + ++ F + L +M +
Sbjct: 621 AVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 177 HGIKPNTVTYNTL 189
++PN TYN L
Sbjct: 681 KMVRPNVETYNAL 693
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 124/284 (43%), Gaps = 37/284 (13%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
++ YRP++ + LI L + +A+ L MV GC + +Y +++ + G +
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 130 RAFSLLEEMKS----------------------------------TPGCQPDVQTYSILI 155
A +LL +M++ T G +P+V TYS LI
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 156 KSCLEVFA-FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
SCL + + LLSDM I PN VT+N LIDA+ K +F E E +M+ R
Sbjct: 303 -SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK-RS 360
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
PD++T NS + F ++D ++ ++ + P+V T+N L+ + K + +
Sbjct: 361 IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGT 420
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ M VTY +I GD + +F+ M S+
Sbjct: 421 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 114/255 (44%), Gaps = 3/255 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
+ AL +F+ + E RPN Y LI L + A +L M+++ + ++ A
Sbjct: 277 DDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNA 335
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+ A+ + G A L ++M PD+ TY+ L+ DK + + M
Sbjct: 336 LIDAFVKEGKFVEAEKLYDDMIKRS-IDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
P+ VTYNTLI + K+KR + EM + R D T + ++ + G D
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTTLIQGLFHDGDCDN 453
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
++ + + + G+ P++ T++ILLD +K V +YMQK I Y +I+
Sbjct: 454 AQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIE 513
Query: 298 AFGKAGDLQQMEYLF 312
KAG + LF
Sbjct: 514 GMCKAGKVDDGWDLF 528
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 115/281 (40%), Gaps = 37/281 (13%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y P+ L+ K+ A+ L MV+ G D ++T L+
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCL----------------------EVFAF--- 164
A +L++ M GCQP++ TY +++ +V F
Sbjct: 208 EAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 165 ----------DKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
D L +M GI+PN VTY++LI R+S+ L +M+ ++
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI-EKK 325
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
P++ T N+ + AF G+ E+ YD I P++ T+N L++ + K
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ E+M +VTYN +I F K+ ++ LFR M
Sbjct: 386 QMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM 426
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 2/224 (0%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+KA ++F+ MV + C D +Y L+ + +S +E L EM S G D TY+
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVTYTT 440
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
LI+ D Q + M G+ P+ +TY+ L+D + E + + +
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKL-EKALEVFDYMQKS 499
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
+ + D++ + + G++D + G++PNV T+N ++ ++
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
A+++ M++ TYN +I A + GD L R MRS
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R + A ++FE + + + P+ Y LI K K+ E ELF+ M G V D +Y
Sbjct: 380 RLDKAKQMFEFMVSKDCF-PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI---------KSCLEVFAF-- 164
T L+ G + A + ++M S G PD+ TYSIL+ + LEVF +
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 165 ------------------------DKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS 200
D L +++ G+KPN VTYNT+I +
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRA 228
E + L +M D P+ T N+ +RA
Sbjct: 558 EAYALLKKMKEDGPL-PNSGTYNTLIRA 584
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 2/225 (0%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+ A+ LF MV + + LLSA ++ + SL E+M+ + TY+I
Sbjct: 67 DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG-LYTYNI 125
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
LI LL M G +P+ VT ++L++ Y KR S+ LV+ + +
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD-AVALVDQMVEM 184
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
+PD T + + + D+ G QPN+ T+ ++++ K D
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
++ M+ +V +N +ID+ K + LF+ M ++
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETK 289
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 84 IVMLGKCKQP--EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKST 141
I++ G C EKALE+F M +D YT ++ ++G ++ + L + S
Sbjct: 475 ILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL-SL 533
Query: 142 PGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
G +P+V TY+ +I + LL M G PN+ TYNTLI A+
Sbjct: 534 KGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 126/268 (47%), Gaps = 5/268 (1%)
Query: 37 KKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKA 96
K L P+ VL+ L +A +F+ Y ++ VY ++ L + +
Sbjct: 6 KSLSPKHVLKLLKSEKNP---RAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHV 62
Query: 97 LELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIK 156
+ + + + C D + +++ Y ++ + ++A + + M+ GC+P +++Y+ L+
Sbjct: 63 SRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLN 122
Query: 157 SCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQ 216
+ +E + KV+ L + G+ PN TYN LI K K F E ++ + +
Sbjct: 123 AFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEF-EKARGFLDWMWKEGFK 181
Query: 217 PDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAV 276
PDV++ ++ + G++D +D+ G+ P+V +NIL+D + K D+K +
Sbjct: 182 PDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMEL 241
Query: 277 MEYMQKYHYSW-TIVTYNIVIDAFGKAG 303
+ + + + + T+NI+I K G
Sbjct: 242 WDRLLEDSSVYPNVKTHNIMISGLSKCG 269
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 112/258 (43%), Gaps = 1/258 (0%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
+ AL VF+ +RE P Y L+ + KQ K LF G + ++Y
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+ + E+A L+ M G +PDV +YS +I + D L +M+
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWK-EGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER 213
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G+ P+ YN LID + K K +L D P+V T N + G++D
Sbjct: 214 GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDD 273
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ +++ + + ++ T++ L+ + K +V + + S +VTYN ++
Sbjct: 274 CLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLG 333
Query: 298 AFGKAGDLQQMEYLFRLM 315
F + G +++ L+R+M
Sbjct: 334 GFCRCGKIKESLELWRIM 351
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 129/280 (46%), Gaps = 20/280 (7%)
Query: 43 TVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQA 102
T+L A E ++ ES FE PN Y LI M K K+ EKA
Sbjct: 119 TLLNAFVEAKQWVKVESLFAYFE----TAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDW 174
Query: 103 MVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLE-- 160
M EG D SY+ +++ +++G L+ A L +EM S G PDV Y+ILI L+
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEM-SERGVAPDVTCYNILIDGFLKEK 233
Query: 161 --VFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
A + LL D +++ PN T+N +I K R + + E + + + D
Sbjct: 234 DHKTAMELWDRLLEDSSVY---PNVKTHNIMISGLSKCGRVDDC-LKIWERMKQNEREKD 289
Query: 219 VWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY---GKGHDYKKMSA 275
++T +S + + G +D E +++ +V T+N +L + GK + ++
Sbjct: 290 LYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR 349
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ME+ S IV+YNI+I + G + + ++RLM
Sbjct: 350 IMEHKN----SVNIVSYNILIKGLLENGKIDEATMIWRLM 385
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 109/238 (45%), Gaps = 5/238 (2%)
Query: 78 GVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEE 137
G++I + + G KAL + Q + G +D +Y +++ + LE A +L++E
Sbjct: 398 GIFIHGLCVNG---YVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 138 MKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAK 197
M S G + + + LI + + L +M +G +P V+YN LI KA
Sbjct: 455 M-SKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513
Query: 198 RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF 257
+F E + + EML + +PD+ T + L +ID + +F +G++ +V
Sbjct: 514 KFGEASAFVKEML-ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMH 572
Query: 258 NILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
NIL+ VM M+ + + +VTYN +++ F K GD + ++ M
Sbjct: 573 NILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM 630
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 2/220 (0%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y +I L K K+ E+A L + M G ++ AL+ R L A L EM
Sbjct: 432 YASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMG 491
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
GC+P V +Y+ILI + F + + +M +G KP+ TY+ L+ + ++
Sbjct: 492 KN-GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKI 550
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
++ L + DV N + ++G++D + N+ T+N
Sbjct: 551 -DLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
L++ + K D + + + YM K I++YN ++
Sbjct: 610 LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 8/191 (4%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
RP Y LI L K + +A + M++ G D ++Y+ LL R ++ A
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L + + G + DV ++ILI V D ++++M N VTYNTL++ +
Sbjct: 556 LWHQFLQS-GLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614
Query: 194 ---GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
G + R + + + +M QPD+ + N+ ++ + +D + GI
Sbjct: 615 FKVGDSNRATVIWGYMYKM----GLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGI 670
Query: 251 QPNVQTFNILL 261
P V T+NIL+
Sbjct: 671 FPTVYTWNILV 681
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 8/226 (3%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
NS V LI L + + +A + M GC SY L+ ++G A + +
Sbjct: 463 NSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFV 522
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+EM G +PD++TYSIL+ D L G++ + + +N LI
Sbjct: 523 KEMLEN-GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCS 581
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
+ + + + M R+C ++ T N+ + F +G + + G+QP++
Sbjct: 582 VGKLDDAMTVMANM-EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDII 640
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYM---QKYHYSWTIVTYNIVIDA 298
++N ++ + +S ME+ + + T+ T+NI++ A
Sbjct: 641 SYNTIMKGLCM---CRGVSYAMEFFDDARNHGIFPTVYTWNILVRA 683
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/269 (19%), Positives = 116/269 (43%), Gaps = 5/269 (1%)
Query: 48 LHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEG 107
+++ A + + AL++F+ + E+ P+ Y LI K K + A+EL+ ++++
Sbjct: 191 INDLAKAGKLDDALELFDEMSER-GVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDS 249
Query: 108 CVV-DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDK 166
V + +++ ++S S+ G ++ + E MK + D+ TYS LI + DK
Sbjct: 250 SVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNER-EKDLYTYSSLIHGLCDAGNVDK 308
Query: 167 VQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTL 226
+ + +++ + VTYNT++ + + + E S + + + ++ + N +
Sbjct: 309 AESVFNELDERKASIDVVTYNTMLGGFCRCGKIKE--SLELWRIMEHKNSVNIVSYNILI 366
Query: 227 RAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYS 286
+ G+ID + G + T+ I + K VM+ ++
Sbjct: 367 KGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGH 426
Query: 287 WTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ Y +ID K L++ L + M
Sbjct: 427 LDVYAYASIIDCLCKKKRLEEASNLVKEM 455
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 2/226 (0%)
Query: 91 KQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQT 150
K+ ++A MV G D +Y+ L+ +E A ++ K G PDV T
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLPDVYT 612
Query: 151 YSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEML 210
YS++I C + ++ Q +M ++PNTV YN LI AY ++ R S M L E +
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS-MALELREDM 671
Query: 211 ADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDY 270
+ P+ T S ++ + +++ + +++ + G++PNV + L+D YGK
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 271 KKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
K+ ++ M + +TY ++I + + G++ + L MR
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 130/302 (43%), Gaps = 40/302 (13%)
Query: 53 TALRWESALK-VFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVD 111
+ L ++SAL+ V E+L + P G+ LI L K + KALEL+ +++G VVD
Sbjct: 447 SHLMFDSALRFVGEMLLRNM--SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 112 CESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
+ ALL +G L+ AF + +E+ GC D +Y+ LI C D+ L
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 172 SDMAIHGIKPNTVTYNTL-----------------------------------IDAYGKA 196
+M G+KP+ TY+ L ID KA
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 197 KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQT 256
+R E + EM++ ++ QP+ N +RA+ G++ + + GI PN T
Sbjct: 624 ERTEEGQEFFDEMMS-KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Query: 257 FNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ L+ ++ + E M+ + Y +ID +GK G + ++E L R M
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 742
Query: 317 SE 318
S+
Sbjct: 743 SK 744
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 3/222 (1%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
AL++F + ++G + LL++ R+ ++ + + G PDV ++ I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV--CKGVSPDVYLFTTAI 267
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
+ + ++ L S M G+ PN VT+NT+ID G R+ E E + +R
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE-AFMFKEKMVERGM 326
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
+P + T + ++ +I + G PNV +N L+DS+ + K
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+ + M S T TYN +I + K G E L + M S
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ ++ I K + E+A++LF M + G + ++ ++ G + AF
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
E+M G +P + TYSIL+K +L +M G PN + YN LID++
Sbjct: 318 KEKMVER-GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+A ++ + +++ + T N+ ++ + GQ D ER + + G N
Sbjct: 377 EAGSLNK-AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 255 QTF 257
+F
Sbjct: 436 GSF 438
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 2/179 (1%)
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
+ G P T +IL+ S + F K D+ G+ P+ + T I+A+ K +
Sbjct: 218 ANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKV 276
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
E L + + P+V T N+ + G G+ D +K G++P + T++I
Sbjct: 277 EE-AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
L+ + V++ M K + ++ YN +ID+F +AG L + + LM S+
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+ E A+K+F + E+ PN + +I LG C + ++A + MV+ G +Y
Sbjct: 275 KVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
+ L+ +R+ + A+ +L+EM + G P+V Y+ LI S +E + +K + M
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEM-TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA 211
G+ + TYNTLI Y K + E L EML+
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 36 SKKLLPRTVL--EALHERVTALRWESALKVFELLREQLWYR---PNSGVYIKLIVMLGKC 90
SK + P TV+ + + R AL+ LRE + ++ PNS Y LI +
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALE----LREDMKHKGISPNSATYTSLIKGMSII 693
Query: 91 KQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQT 150
+ E+A LF+ M EG + YTAL+ Y + G + + LL EM S P+ T
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS-KNVHPNKIT 752
Query: 151 YSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
Y+++I + LL++M GI P+++TY I Y K
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 2/224 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ PN VY LI + KA+E+ MV +G + +Y L+ Y ++G + A
Sbjct: 361 FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
LL+EM S G + +++ +I FD + +M + + P TLI
Sbjct: 421 RLLKEMLSI-GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
K + S+ + L ++ D T N+ L G++D R + G
Sbjct: 480 LCKHGKHSKALELWFQFL-NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ ++N L+ + ++ M K TY+I+I
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 2/226 (0%)
Query: 91 KQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQT 150
K+ ++A MV G D +Y+ L+ +E A ++ K G PDV T
Sbjct: 554 KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRN-GMLPDVYT 612
Query: 151 YSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEML 210
YS++I C + ++ Q +M ++PNTV YN LI AY ++ R S M L E +
Sbjct: 613 YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLS-MALELREDM 671
Query: 211 ADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDY 270
+ P+ T S ++ + +++ + +++ + G++PNV + L+D YGK
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 271 KKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
K+ ++ M + +TY ++I + + G++ + L MR
Sbjct: 732 VKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMR 777
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 130/302 (43%), Gaps = 40/302 (13%)
Query: 53 TALRWESALK-VFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVD 111
+ L ++SAL+ V E+L + P G+ LI L K + KALEL+ +++G VVD
Sbjct: 447 SHLMFDSALRFVGEMLLRNM--SPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504
Query: 112 CESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
+ ALL +G L+ AF + +E+ GC D +Y+ LI C D+ L
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGR-GCVMDRVSYNTLISGCCGKKKLDEAFMFL 563
Query: 172 SDMAIHGIKPNTVTYNTL-----------------------------------IDAYGKA 196
+M G+KP+ TY+ L ID KA
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623
Query: 197 KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQT 256
+R E + EM++ ++ QP+ N +RA+ G++ + + GI PN T
Sbjct: 624 ERTEEGQEFFDEMMS-KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Query: 257 FNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ L+ ++ + E M+ + Y +ID +GK G + ++E L R M
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMH 742
Query: 317 SE 318
S+
Sbjct: 743 SK 744
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 95/222 (42%), Gaps = 3/222 (1%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
AL++F + ++G + LL++ R+ ++ + + G PDV ++ I
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVV--CKGVSPDVYLFTTAI 267
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
+ + ++ L S M G+ PN VT+NT+ID G R+ E E + +R
Sbjct: 268 NAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDE-AFMFKEKMVERGM 326
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
+P + T + ++ +I + G PNV +N L+DS+ + K
Sbjct: 327 EPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIE 386
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+ + M S T TYN +I + K G E L + M S
Sbjct: 387 IKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 2/183 (1%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ ++ I K + E+A++LF M + G + ++ ++ G + AF
Sbjct: 258 PDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMF 317
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
E+M G +P + TYSIL+K +L +M G PN + YN LID++
Sbjct: 318 KEKMVER-GMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFI 376
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+A ++ + +++ + T N+ ++ + GQ D ER + + G N
Sbjct: 377 EAGSLNK-AIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQ 435
Query: 255 QTF 257
+F
Sbjct: 436 GSF 438
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 2/179 (1%)
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
+ G P T +IL+ S + F K D+ G+ P+ + T I+A+ K +
Sbjct: 218 ANKGMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKV 276
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
E L + + P+V T N+ + G G+ D +K G++P + T++I
Sbjct: 277 EE-AVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSI 335
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
L+ + V++ M K + ++ YN +ID+F +AG L + + LM S+
Sbjct: 336 LVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 2/156 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+ E A+K+F + E+ PN + +I LG C + ++A + MV+ G +Y
Sbjct: 275 KVEEAVKLFSKM-EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITY 333
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
+ L+ +R+ + A+ +L+EM + G P+V Y+ LI S +E + +K + M
Sbjct: 334 SILVKGLTRAKRIGDAYFVLKEM-TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMV 392
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA 211
G+ + TYNTLI Y K + E L EML+
Sbjct: 393 SKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 77/165 (46%), Gaps = 10/165 (6%)
Query: 36 SKKLLPRTVL--EALHERVTALRWESALKVFELLREQLWYR---PNSGVYIKLIVMLGKC 90
SK + P TV+ + + R AL+ LRE + ++ PNS Y LI +
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALE----LREDMKHKGISPNSATYTSLIKGMSII 693
Query: 91 KQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQT 150
+ E+A LF+ M EG + YTAL+ Y + G + + LL EM S P+ T
Sbjct: 694 SRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS-KNVHPNKIT 752
Query: 151 YSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
Y+++I + LL++M GI P+++TY I Y K
Sbjct: 753 YTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLK 797
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 2/224 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ PN VY LI + KA+E+ MV +G + +Y L+ Y ++G + A
Sbjct: 361 FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
LL+EM S G + +++ +I FD + +M + + P TLI
Sbjct: 421 RLLKEMLSI-GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
K + S+ + L ++ D T N+ L G++D R + G
Sbjct: 480 LCKHGKHSKALELWFQFL-NKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ ++N L+ + ++ M K TY+I+I
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILI 582
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 112/240 (46%), Gaps = 5/240 (2%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P GV+ L +L E+A++ F M S LL +++ G +
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
++M G +P V TY+I+I + + +GL +M G+ P+TVTYN++ID +G
Sbjct: 250 FKDMIGA-GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
K R + EM D C+PDV T N+ + F G++ Y + + G++PNV
Sbjct: 309 KVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNV 367
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
+++ L+D++ K ++ M++ TY +IDA K G+L FRL
Sbjct: 368 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDA---FRL 424
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 2/234 (0%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
RP Y +I + K E A LF+ M G V D +Y +++ + + G L+
Sbjct: 259 RPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVC 318
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
EEMK C+PDV TY+ LI + +M +G+KPN V+Y+TL+DA+
Sbjct: 319 FFEEMKDM-CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAF 377
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
K + V+M P+ +T S + A +G + R ++ G++ N
Sbjct: 378 CKEGMMQQAIKFYVDM-RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 436
Query: 254 VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
V T+ L+D K+ + M + +YN +I F KA ++ +
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDR 490
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 107/228 (46%), Gaps = 2/228 (0%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+PN Y L+ K ++A++ + M G V + +YT+L+ A + G L AF
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L EM G + +V TY+ LI + + + L M G+ PN +YN LI +
Sbjct: 424 LGNEMLQV-GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGF 482
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
KAK L E L R +PD+ + + +L +I+ + ++ + GI+ N
Sbjct: 483 VKAKNMDRALELLNE-LKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKAN 541
Query: 254 VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
+ L+D+Y K + + +++ M++ T+VT+ ++ID K
Sbjct: 542 SLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCK 589
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 9/236 (3%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
N Y LI L ++ ++A ELF M G + + SY AL+ + ++ ++RA LL
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 495
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
E+K G +PD+ Y I + + + ++++M GIK N++ Y TL+DAY K
Sbjct: 496 NELKGR-GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFK 554
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN----LGQIDTMERCYDKFQTAGIQ 251
+ +E L EM + D + V T + +D R + F G+Q
Sbjct: 555 SGNPTEGLHLLDEM-KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF---GLQ 610
Query: 252 PNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
N F ++D K + + + + E M + Y ++D K G++ +
Sbjct: 611 ANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLE 666
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 106/261 (40%), Gaps = 40/261 (15%)
Query: 62 KVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQ-AMVDEGCVVDCESYTALLS 120
K+F+L +W P V +K + P+ A + F+ +M G ESY +
Sbjct: 100 KLFDLTLAPIWV-PRVLVELK--------EDPKLAFKFFKWSMTRNGFKHSVESYCIVAH 150
Query: 121 AYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS---CLEVFA-FDKVQGLLSDMAI 176
+ + A S+L+EM + + D + +L + C+ F FD + +L D+ +
Sbjct: 151 ILFCARMYYDANSVLKEMVLS---KADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGM 207
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
I + K KRF T R C N L F LG+ D
Sbjct: 208 ---------LEEAIQCFSKMKRFRVFPKT-------RSC-------NGLLHRFAKLGKTD 244
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
++R + AG +P V T+NI++D K D + + E M+ VTYN +I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304
Query: 297 DAFGKAGDLQQMEYLFRLMRS 317
D FGK G L F M+
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKD 325
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 1/125 (0%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A+ F + + N+ ++ +I L K Q E A LF+ MV +G V D +YT+L+
Sbjct: 596 AVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+ G + A +L ++M G + D+ Y+ L+ K + L +M GI
Sbjct: 656 DGNFKQGNVLEALALRDKMAEI-GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGI 714
Query: 180 KPNTV 184
P+ V
Sbjct: 715 HPDEV 719
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/324 (27%), Positives = 146/324 (45%), Gaps = 50/324 (15%)
Query: 34 INSKKLLPRTVLEALHERVT--ALRWESALKVFELLREQLWYRPNSGV------YIKLIV 85
+ SK L P +E + VT +LR+ + F+L+ E GV Y +I
Sbjct: 176 VKSKSLFP---METIFYNVTMKSLRFG---RQFQLIEEMALEMVKDGVELDNITYSTIIT 229
Query: 86 MLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQ 145
+C KA+E F+ M G + D +Y+A+L YS+SG +E SL E +T G +
Sbjct: 230 CAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVAT-GWK 288
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR------- 198
PD +S+L K E +D ++ +L +M +KPN V YNTL++A G+A +
Sbjct: 289 PDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSL 348
Query: 199 FSEM--------ESTLVEMLA-------DRDC-------QPDVWTM-----NSTLRAFGN 231
F+EM E TL ++ RD + W M N+ L +
Sbjct: 349 FNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCAD 408
Query: 232 LGQIDTMERCY-DKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
+G + ER + D ++ +P+ ++ +L+ YG G +K + E M K ++
Sbjct: 409 IGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVM 468
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRL 314
++ GKA + + Y+F L
Sbjct: 469 GCTCLVQCLGKAKRIDDVVYVFDL 492
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 6/223 (2%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
E ALE MV +G +D +Y+ +++ R L +A E M T G PD TYS
Sbjct: 207 EMALE----MVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKT-GLMPDEVTYSA 261
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
++ + ++V L G KP+ + ++ L +G+A + + L EM
Sbjct: 262 ILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEM-KSM 320
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
D +P+V N+ L A G G+ +++ AG+ PN +T L+ YGK +
Sbjct: 321 DVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDA 380
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ E M+ + + YN +++ G ++ E LF M+
Sbjct: 381 LQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMK 423
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Query: 151 YSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL--VE 208
Y++ +KS F ++ + +M G++ + +TY+T+I AKR + + E
Sbjct: 189 YNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITC---AKRCNLYNKAIEWFE 245
Query: 209 MLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGH 268
+ PD T ++ L + G+++ + Y++ G +P+ F++L +G+
Sbjct: 246 RMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAG 305
Query: 269 DYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
DY + V++ M+ +V YN +++A G+AG LF M
Sbjct: 306 DYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 352
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 1/144 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN L+ + GK + AL+L++ M + +D Y LL+ + GL E A L
Sbjct: 359 PNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERL 418
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+MK + C+PD +Y+ ++ +K L +M G++ N + L+ G
Sbjct: 419 FNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLG 478
Query: 195 KAKRFSEMESTLVEMLADRDCQPD 218
KAKR ++ + ++ R +PD
Sbjct: 479 KAKRIDDV-VYVFDLSIKRGVKPD 501
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 122/258 (47%), Gaps = 3/258 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E + KV E ++ P+ + L+ L K E A + + M D G V D +++
Sbjct: 266 EKSFKVRERMKAD-HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L YS + E A + E + G + + T SIL+ + + +K + +L
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDS-GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAK 383
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G+ PN V YNT+ID Y + +E + + +PD N +R F LG+++
Sbjct: 384 GLVPNEVIYNTMIDGYCRKGDLVGARMK-IEAMEKQGMKPDHLAYNCLIRRFCELGEMEN 442
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
E+ +K + G+ P+V+T+NIL+ YG+ +++ K +++ M+ +V+Y +I+
Sbjct: 443 AEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLIN 502
Query: 298 AFGKAGDLQQMEYLFRLM 315
K L + + + R M
Sbjct: 503 CLCKGSKLLEAQIVKRDM 520
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 113/244 (46%), Gaps = 6/244 (2%)
Query: 75 PNSGVYIKLIVMLGKCKQPE--KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
PN +Y +I G C++ + A +AM +G D +Y L+ + G +E A
Sbjct: 387 PNEVIYNTMID--GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
+ +MK G P V+TY+ILI + FDK +L +M +G PN V+Y TLI+
Sbjct: 445 KEVNKMK-LKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINC 503
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
K + E + +M DR P V N + + G+I+ R + GI+
Sbjct: 504 LCKGSKLLEAQIVKRDM-EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIEL 562
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
N+ T+N L+D + ++ + + + TYN +I +G AG++Q+ L+
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 313 RLMR 316
M+
Sbjct: 623 EEMK 626
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 6/233 (2%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y LI G+ + +K ++ + M D G + + SY L++ + L A +
Sbjct: 457 PSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIV 516
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+M+ G P V+ Y++LI C + +M GI+ N VTYNTLID
Sbjct: 517 KRDMEDR-GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLS 575
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+ SE E L+E ++ + +PDV+T NS + +G G + Y++ + +GI+P +
Sbjct: 576 MTGKLSEAEDLLLE-ISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+T+++L+ K + + + ++ YN V+ + GD+++
Sbjct: 635 KTYHLLISLCTK----EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEK 683
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 112/272 (41%), Gaps = 37/272 (13%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAM---------------VDEGC----VVDCE 113
+RP+ +Y K I K K LELF M +D C + D E
Sbjct: 175 FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAE 234
Query: 114 ----------------SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS 157
+Y L+ Y ++G E++F + E MK+ +P + T++ L+K
Sbjct: 235 QLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH-IEPSLITFNTLLKG 293
Query: 158 CLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQP 217
+ + + +L +M G P+ T++ L D Y ++ +E + E D +
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEK-AEAALGVYETAVDSGVKM 352
Query: 218 DVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM 277
+ +T + L A G+I+ E + G+ PN +N ++D Y + D +
Sbjct: 353 NAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKI 412
Query: 278 EYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
E M+K + YN +I F + G+++ E
Sbjct: 413 EAMEKQGMKPDHLAYNCLIRRFCELGEMENAE 444
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 2/220 (0%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y+ L V+L + K +A +LF A+ +EG +S T LL ++ ++ +
Sbjct: 112 YLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNIL 171
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
+ +P Y I++ +++ K L + M I P+ YN LID K KR
Sbjct: 172 ESD-FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRM 230
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
++ E EMLA R P + T N+ + + G + + ++ + I+P++ TFN
Sbjct: 231 NDAEQLFDEMLARR-LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNT 289
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
LL K + V++ M+ + T++I+ D +
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 107/224 (47%), Gaps = 19/224 (8%)
Query: 81 IKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKS 140
I + M GK + E +L + +G D +Y +L+S Y +G ++R +L EEMK
Sbjct: 571 IDGLSMTGKLSEAE---DLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 141 TPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY---GKAK 197
+ G +P ++TY +LI C + + + L +M++ KP+ + YN ++ Y G +
Sbjct: 628 S-GIKPTLKTYHLLISLCTKE-GIELTERLFGEMSL---KPDLLVYNGVLHCYAVHGDME 682
Query: 198 RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF 257
+ ++ ++E + D T NS + +G++ + D+ ++P T+
Sbjct: 683 KAFNLQKQMIE----KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTY 738
Query: 258 NILLDSYGKGHDYKKMSAVMEY--MQKYHYSWTIVTYNIVIDAF 299
NI++ + + DY MSA + Y MQ+ + + N ++
Sbjct: 739 NIIVKGHCEVKDY--MSAYVWYREMQEKGFLLDVCIGNELVSGL 780
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 132/264 (50%), Gaps = 6/264 (2%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
RW+ +++FE +++ + + Y I +G K KALE++Q++ DE ++
Sbjct: 113 RWQDLIQLFEWMQQH--GKISVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYIC 169
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV-FAFDKVQGLLSDM 174
++LS ++G L+ L ++MK G +PDV TY+ L+ C++V + K L+ ++
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRD-GLKPDVVTYNTLLAGCIKVKNGYPKAIELIGEL 228
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
+GI+ ++V Y T++ R E E+ + +M + P+++ +S L ++ G
Sbjct: 229 PHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGH-SPNIYHYSSLLNSYSWKGD 287
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNI 294
+ + ++ G+ PN LL Y KG + + ++ ++ Y+ + Y +
Sbjct: 288 YKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCM 347
Query: 295 VIDAFGKAGDLQQMEYLFRLMRSE 318
++D KAG L++ +F M+ +
Sbjct: 348 LMDGLSKAGKLEEARSIFDDMKGK 371
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+KA EL M G V + T LL Y + GL +R+ LL E++S G + Y +
Sbjct: 289 KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESA-GYAENEMPYCM 347
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
L+ + ++ + + DM G++ + + +I A ++KRF E + E+ D
Sbjct: 348 LMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAK----ELSRDS 403
Query: 214 DC---QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
+ + D+ +N+ L A+ G+++++ R K + P+ TF+IL+ + K
Sbjct: 404 ETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIK 459
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 119/247 (48%), Gaps = 1/247 (0%)
Query: 71 LWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLER 130
L ++PN + LI L K ++A E+ + MV G + ++TAL+ + G E+
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 131 AFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLI 190
AF L ++ + +P+V TY+ +I + ++ + L S M G+ PN TY TLI
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 191 DAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
+ + KA F L+ ++ D P+++T N+ + + + +K + G+
Sbjct: 401 NGHCKAGSFGRAYE-LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGL 459
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEY 310
+ + T+ IL+ K +D + A M K + + NI+I AF + +++ E
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 519
Query: 311 LFRLMRS 317
LF+L+ S
Sbjct: 520 LFQLVVS 526
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 6/260 (2%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPE--KALELFQAMVDEGCVVDCESY 115
E A ++F L Y+PN Y +I G CK+ + +A LF M ++G + +Y
Sbjct: 339 EKAFRLFLKLVRSDTYKPNVHTYTSMIG--GYCKEDKLNRAEMLFSRMKEQGLFPNVNTY 396
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
T L++ + ++G RA+ L+ M G P++ TY+ I S + + LL+
Sbjct: 397 TTLINGHCKAGSFGRAYELMNLM-GDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAF 455
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G++ + VTY LI K ++ + M + D+ N + AF ++
Sbjct: 456 SCGLEADGVTYTILIQEQCKQNDINQALAFFCRM-NKTGFEADMRLNNILIAAFCRQKKM 514
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
ER + + G+ P +T+ ++ Y K D M+++ TY +
Sbjct: 515 KESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSL 574
Query: 296 IDAFGKAGDLQQMEYLFRLM 315
I K + + L+ M
Sbjct: 575 ISGLCKKSMVDEACKLYEAM 594
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 93/226 (41%), Gaps = 3/226 (1%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
E A +F M G V D SY ++ R G ++ A L M G PD T ++
Sbjct: 199 EYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQR-GFIPDNATCTL 257
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
++ + E ++ M G KPN + + +LID K + L EM+ +
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRN- 316
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKF-QTAGIQPNVQTFNILLDSYGKGHDYKK 272
+P+V+T + + G + R + K ++ +PNV T+ ++ Y K +
Sbjct: 317 GWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 273 MSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ M++ + TY +I+ KAG + L LM E
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDE 422
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
E +L +S G L A ++ +M++ G P T + +++ +E+ + + +
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQ-GLTPSSITMNCVLEIAVELGLIEYAENVFD 206
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
+M++ G+ P++ +Y ++ + + E + L M+ R PD T L A
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMI-QRGFIPDNATCTLILTALCEN 265
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
G ++ + K G +PN+ F L+D K K+ ++E M + + + T+
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH 325
Query: 293 NIVIDAFGKAGDLQQMEYLF-RLMRSE 318
+ID K G ++ LF +L+RS+
Sbjct: 326 TALIDGLCKRGWTEKAFRLFLKLVRSD 352
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LI + K+ +++ LFQ +V G + E+YT+++S Y + G ++ A MK
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR-H 562
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
GC PD TY LI + D+ L M G+ P VT TL AY KR
Sbjct: 563 GCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTL--AYEYCKR 616
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 4/199 (2%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
++A KVF+ + + +R N Y +LI L + K+ ++AL L M D+ C + +YT
Sbjct: 207 DAAFKVFKEMTQNGCHR-NEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTV 265
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+ A SG A +L ++M S G +PD Y++LI+S D+ GLL M +
Sbjct: 266 LIDALCGSGQKSEAMNLFKQM-SESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLEN 324
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G+ PN +TYN LI + K M L+ + +++ PD+ T N+ + + G +D+
Sbjct: 325 GLMPNVITYNALIKGFCKKNVHKAM--GLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDS 382
Query: 238 MERCYDKFQTAGIQPNVQT 256
R + +G+ PN +T
Sbjct: 383 AYRLLSLMEESGLVPNQRT 401
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 109/246 (44%), Gaps = 2/246 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
++ Y+ Y L+ L + E+ L+ M+++ D ++ L++ Y + G +
Sbjct: 113 EIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVV 172
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A + + GC PD TY+ I D + +M +G N V+Y L
Sbjct: 173 EAKQYVTWLIQA-GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQL 231
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
I +AK+ E S LV+M D +C P+V T + A GQ + + +G
Sbjct: 232 IYGLFEAKKIDEALSLLVKM-KDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESG 290
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
I+P+ + +L+ S+ G + S ++E+M + ++TYN +I F K + M
Sbjct: 291 IKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMG 350
Query: 310 YLFRLM 315
L +++
Sbjct: 351 LLSKML 356
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 99/213 (46%), Gaps = 3/213 (1%)
Query: 103 MVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVF 162
++ GC D +YT+ ++ + R ++ AF + +EM GC + +Y+ LI E
Sbjct: 181 LIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQN-GCHRNEVSYTQLIYGLFEAK 239
Query: 163 AFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTM 222
D+ LL M PN TY LIDA + + SE + L + +++ +PD
Sbjct: 240 KIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMN-LFKQMSESGIKPDDCMY 298
Query: 223 NSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQK 282
+++F + +D + G+ PNV T+N L+ + K + +K M ++ M +
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAM-GLLSKMLE 357
Query: 283 YHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ ++TYN +I +G+L L LM
Sbjct: 358 QNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLM 390
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 109/242 (45%), Gaps = 2/242 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN+ Y LI K K+ + A +L M + GC D +Y L+ SG ++ A ++
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
++ G PD Y++L+ + F + L S+M I P+ Y TLID +
Sbjct: 438 KVKLIDR-GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFI 496
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
++ F E + ++ + DV N+ ++ F G +D C ++ + P+
Sbjct: 497 RSGDFDEARKVF-SLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDK 555
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
T++ ++D Y K D + YM+K +VTY +I+ F GD + E F+
Sbjct: 556 FTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE 615
Query: 315 MR 316
M+
Sbjct: 616 MQ 617
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 1/171 (0%)
Query: 144 CQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEME 203
C+PDV TY+ILI + + G L + + G+ PN ++Y LI AY K+K + ++
Sbjct: 341 CKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEY-DIA 399
Query: 204 STLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS 263
S L+ +A+R C+PD+ T + G +D K G+ P+ +N+L+
Sbjct: 400 SKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSG 459
Query: 264 YGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
K + + M + Y +ID F ++GD + +F L
Sbjct: 460 LCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL 510
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 103/231 (44%), Gaps = 6/231 (2%)
Query: 80 YIKLIVMLGKCKQP--EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEE 137
Y I++ G C + E +L + +GC+ + Y ++ Y + G +E A+ + +E
Sbjct: 206 YSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKE 265
Query: 138 MKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA-YGKA 196
+K G P ++T+ +I + F LLS++ G++ + N +IDA Y
Sbjct: 266 LK-LKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHG 324
Query: 197 KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQT 256
+ ES + + DC+PDV T N + G+ + D+ G+ PN +
Sbjct: 325 YKVDPAES--IGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLS 382
Query: 257 FNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+ L+ +Y K +Y S ++ M + IVTY I+I +G +
Sbjct: 383 YAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDD 433
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/281 (20%), Positives = 102/281 (36%), Gaps = 48/281 (17%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P++ VY LI + ++A ++F V++G VD + A++ + RSG+L+ A +
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 135 LEEMKS---TPG-------------------------------CQPDVQTYSILIKSCLE 160
+ M P C+P+V TY+ LI
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC 602
Query: 161 VFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVW 220
F + +M + + PN VTY TLI + K E E++ C P+
Sbjct: 603 QGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEV 662
Query: 221 TMNSTLRAF--------------GNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
T N L+ F N GQ + + ++ G + +N L
Sbjct: 663 TFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCV 722
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
K + M K +S V++ ++ F G+ +Q
Sbjct: 723 HGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 113/248 (45%), Gaps = 2/248 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L + P+ + LI + E+A+ + MV+ G D YT ++ + ++G +
Sbjct: 135 KLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVN 194
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A SL ++M++ G +PDV Y+ L+ + LL M IKP+ +T+N L
Sbjct: 195 YALSLFDQMENY-GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNAL 253
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
IDA+ K +F + E EM+ P+++T S + F G +D + + +T G
Sbjct: 254 IDAFVKEGKFLDAEELYNEMIR-MSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKG 312
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
P+V + L++ + K + M + + +TY +I FG+ G +
Sbjct: 313 CFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQ 372
Query: 310 YLFRLMRS 317
+F M S
Sbjct: 373 EVFSHMVS 380
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 102/220 (46%), Gaps = 5/220 (2%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
A EL+ M+ + +YT+L++ + G ++ A + M+ T GC PDV Y+ LI
Sbjct: 266 AEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME-TKGCFPDVVAYTSLI 324
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
+ D + +M+ G+ NT+TY TLI +G+ + + + M++ R
Sbjct: 325 NGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS-RGV 383
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQ---TAGIQPNVQTFNILLDSYGKGHDYKK 272
P++ T N L G++ ++ Q G+ PN+ T+N+LL +K
Sbjct: 384 PPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEK 443
Query: 273 MSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
V E M+K I+TY I+I KAG ++ LF
Sbjct: 444 ALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLF 483
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 123/275 (44%), Gaps = 7/275 (2%)
Query: 46 EALHERVTALRWESALKVFELLREQLWYRPNSGV--YIKLIVMLGKCKQPEKALELFQAM 103
E L + +L++ AL +F + E RP + + KL+ ++ K K+ + + L +
Sbjct: 42 EILRNGLHSLQFNEALDLFTHMVES---RPLPSIIDFTKLLNVIAKMKKFDVVINLCDHL 98
Query: 104 VDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFA 163
G D + L++ + +S A S L +M G +PD+ T++ LI
Sbjct: 99 QIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKL-GFEPDIVTFTSLINGFCLGNR 157
Query: 164 FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMN 223
++ +++ M GIKP+ V Y T+ID+ K + S L + + + +PDV
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS-LFDQMENYGIRPDVVMYT 216
Query: 224 STLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKY 283
S + N G+ + I+P+V TFN L+D++ K + + M +
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 284 HYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ I TY +I+ F G + + +F LM ++
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 38/174 (21%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+ + A+K+F + ++ N+ Y LI G+ +P A E+F MV G + +Y
Sbjct: 332 KVDDAMKIFYEMSQK-GLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Query: 116 TALLSAYSRSGLLERAFSLLEEM--KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
LL +G +++A + E+M + G P++ TY++L+ +K + D
Sbjct: 391 NVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFED 450
Query: 174 M---------------------------AIH--------GIKPNTVTYNTLIDA 192
M A++ G+KPN VTY T+I
Sbjct: 451 MRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISG 504
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 114/249 (45%), Gaps = 5/249 (2%)
Query: 56 RWESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCES 114
+WE K+ ++ E+ PN Y LI L + + E+A+ L + M ++G D S
Sbjct: 313 KWEEGEKLMTKMFSEKC--DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
Y L++A+ R G L+ A LE M S GC PD+ Y+ ++ + + D+ + +
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISD-GCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
G PN+ +YNT+ A + ++EM+++ PD T NS + G
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN-GIDPDEITYNSMISCLCREGM 488
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNI 294
+D ++ P+V T+NI+L + K H + V+E M TY +
Sbjct: 489 VDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTV 548
Query: 295 VIDAFGKAG 303
+I+ G AG
Sbjct: 549 LIEGIGFAG 557
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 126/256 (49%), Gaps = 11/256 (4%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A++V E+L + + +P+ Y LI K + + A + M + D +Y ++
Sbjct: 143 AVRVMEILEK--FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMI 200
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+ G L+ A +L ++ S CQP V TY+ILI++ + D+ L+ +M G+
Sbjct: 201 GSLCSRGKLDLALKVLNQLLSD-NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGL 259
Query: 180 KPNTVTYNTLIDAY---GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
KP+ TYNT+I G R EM V L + C+PDV + N LRA N G+ +
Sbjct: 260 KPDMFTYNTIIRGMCKEGMVDRAFEM----VRNLELKGCEPDVISYNILLRALLNQGKWE 315
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
E+ K + PNV T++IL+ + + ++ +++ M++ + +Y+ +I
Sbjct: 316 EGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 375
Query: 297 DAFGKAGDLQ-QMEYL 311
AF + G L +E+L
Sbjct: 376 AAFCREGRLDVAIEFL 391
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 118/264 (44%), Gaps = 11/264 (4%)
Query: 58 ESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQP--EKALELFQAMVDEGCVVDCES 114
+ ALK+ E+L L +P+ Y +I G CK+ ++A E+ + + +GC D S
Sbjct: 245 DEALKLMDEMLSRGL--KPDMFTYNTII--RGMCKEGMVDRAFEMVRNLELKGCEPDVIS 300
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
Y LL A G E L+ +M S C P+V TYSILI + ++ LL M
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
G+ P+ +Y+ LI A+ + R L M++D C PD+ N+ L G+
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD-GCLPDIVNYNTVLATLCKNGK 418
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDS-YGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
D + K G PN ++N + + + G + + ++E M +TYN
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSN-GIDPDEITYN 477
Query: 294 IVIDAFGKAGDLQQMEYLFRLMRS 317
+I + G + + L MRS
Sbjct: 478 SMISCLCREGMVDEAFELLVDMRS 501
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 4/273 (1%)
Query: 44 VLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAM 103
+L+ H + + +L + E + + Y P+ + KLI + KA+ + + +
Sbjct: 92 MLKIFHRSCRSGNYIESLHLLETMVRK-GYNPDVILCTKLIKGFFTLRNIPKAVRVMEIL 150
Query: 104 VDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFA 163
G D +Y AL++ + + ++ A +L+ M+S PD TY+I+I S
Sbjct: 151 EKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSK-DFSPDTVTYNIMIGSLCSRGK 208
Query: 164 FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMN 223
D +L+ + +P +TY LI+A E + EML+ R +PD++T N
Sbjct: 209 LDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS-RGLKPDMFTYN 267
Query: 224 STLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKY 283
+ +R G +D + G +P+V ++NILL + +++ +M M
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 284 HYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+VTY+I+I + G +++ L +LM+
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMK 360
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 3/170 (1%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y ++ L K + ++ALE+F + + GC + SY + SA SG RA +
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+ EM S G PD TY+ +I D+ LL DM P+ VTYN ++ +
Sbjct: 461 ILEMMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFC 519
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG-QIDTMERCYD 243
KA R + + L M+ + C+P+ T + G G + + ME D
Sbjct: 520 KAHRIEDAINVLESMVGN-GCRPNETTYTVLIEGIGFAGYRAEAMELAND 568
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 10/293 (3%)
Query: 24 IIDKRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKL 83
+I+ RKK +N + T + + A + + A+ F ++ E+ PN + L
Sbjct: 156 LINAMRKKKMLNVE-----TFCIVMRKYARAQKVDEAIYAFNVM-EKYDLPPNLVAFNGL 209
Query: 84 IVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPG 143
+ L K K KA E+F+ M D D ++Y+ LL + + L +A + EM G
Sbjct: 210 LSALCKSKNVRKAQEVFENMRDRF-TPDSKTYSILLEGWGKEPNLPKAREVFREMIDA-G 267
Query: 144 CQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEME 203
C PD+ TYSI++ + D+ G++ M KP T Y+ L+ YG R E
Sbjct: 268 CHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAV 327
Query: 204 STLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS 263
T +EM + DV NS + AF ++ + R + ++ G+ PN ++ NI+L
Sbjct: 328 DTFLEM-ERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386
Query: 264 YGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ + + V M K TY +VI F + +++ + +++ MR
Sbjct: 387 LIERGEKDEAFDVFRKMIKVCEP-DADTYTMVIKMFCEKKEMETADKVWKYMR 438
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 141/317 (44%), Gaps = 41/317 (12%)
Query: 1 MKNSKIASQKAVSVILRREATKAIIDKRRKKGPINSKKLLPRTVLEALHERVTAL----R 56
M+ K+ + + +++R+ A +D+ + K LP ++ A + ++AL
Sbjct: 160 MRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLV-AFNGLLSALCKSKN 218
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
A +VFE +R++ + P+S Y L+ GK KA E+F+ M+D GC D +Y+
Sbjct: 219 VRKAQEVFENMRDR--FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYS 276
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
++ ++G ++ A ++ M + C+P YS+L+ + ++ +M
Sbjct: 277 IMVDILCKAGRVDEALGIVRSMDPSI-CKPTTFIYSVLVHTYGTENRLEEAVDTFLEMER 335
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEM------------------LADRD---- 214
G+K + +N+LI A+ KA R + L EM L +R
Sbjct: 336 SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDE 395
Query: 215 -----------CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS 263
C+PD T ++ F +++T ++ + + G+ P++ TF++L++
Sbjct: 396 AFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLING 455
Query: 264 YGKGHDYKKMSAVMEYM 280
+ +K ++E M
Sbjct: 456 LCEERTTQKACVLLEEM 472
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 118/284 (41%), Gaps = 36/284 (12%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R AL +F+ + + Y+PN +Y +I L K KQ + AL+L M +G D +Y
Sbjct: 166 RVYDALYMFDQM-VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 116 TALLSAYSRSGLLERAFSLLEEMKS-------------TPGC------------------ 144
+L+S SG A ++ M C
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIR 284
Query: 145 ---QPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
PD+ TYS+LI D+ + + M G P+ VTY+ LI+ Y K+K+
Sbjct: 285 RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
EM + R + T ++ + G+++ E + + G+ PN+ T+N+LL
Sbjct: 345 GMKLFCEM-SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 262 DSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
+K ++ MQK IVTYNI+I KAG++
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEV 447
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 108/246 (43%), Gaps = 2/246 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L + P+ + L+ + + AL +F MV G + Y ++ +S ++
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A LL M+ G PDV TY+ LI + ++S M I P+ T+N L
Sbjct: 204 NALDLLNRMEKD-GIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNAL 262
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
IDA K R SE E EM+ R PD+ T + + ++D E + + G
Sbjct: 263 IDACVKEGRVSEAEEFYEEMIR-RSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG 321
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
P+V T++IL++ Y K + + M + VTY I+I + +AG L E
Sbjct: 322 CFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAE 381
Query: 310 YLFRLM 315
+FR M
Sbjct: 382 EIFRRM 387
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 91/204 (44%), Gaps = 5/204 (2%)
Query: 65 ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSR 124
E++R L P+ Y LI L + ++A E+F MV +GC D +Y+ L++ Y +
Sbjct: 281 EMIRRSL--DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 125 SGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTV 184
S +E L EM S G + TY+ILI+ + + + M G+ PN +
Sbjct: 339 SKKVEHGMKLFCEM-SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 185 TYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDK 244
TYN L+ + + L +M + D+ T N +R G++ Y
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKN-GMDADIVTYNIIIRGMCKAGEVADAWDIYCS 456
Query: 245 FQTAGIQPNVQTF-NILLDSYGKG 267
G+ P++ T+ ++L Y KG
Sbjct: 457 LNCQGLMPDIWTYTTMMLGLYKKG 480
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 117/274 (42%), Gaps = 5/274 (1%)
Query: 46 EALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVD 105
E L + ++ + +L +F + Q P+ + +L+ + K K+ + + L++ M
Sbjct: 51 EMLRNGIRFMKLDDSLDLFFHM-VQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQM 109
Query: 106 EGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS-CLEVFAF 164
G + + LL+ + R L A S L +M G +P + T+ L+ C +
Sbjct: 110 LGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKL-GHEPSIVTFGSLLNGFCRGDRVY 168
Query: 165 DKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNS 224
D + + M G KPN V YNT+ID K+K+ L M D PDV T NS
Sbjct: 169 DALY-MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKD-GIGPDVVTYNS 226
Query: 225 TLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYH 284
+ + G+ R I P+V TFN L+D+ K + E M +
Sbjct: 227 LISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRS 286
Query: 285 YSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
IVTY+++I L + E +F M S+
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK 320
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 115/267 (43%), Gaps = 27/267 (10%)
Query: 8 SQKAVSVILRRE------ATKAIIDKRRKKGPINS----------KKLLPRTVLEAL--H 49
+ + VS + +RE A+ID K+G ++ + L P V +L +
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 50 ERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCV 109
R + A ++F + + + P+ Y LI K K+ E ++LF M G V
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCF-PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358
Query: 110 VDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQG 169
+ +YT L+ Y R+G L A + M G P++ TY++L+ + +K
Sbjct: 359 RNTVTYTILIQGYCRAGKLNVAEEIFRRMVFC-GVHPNIITYNVLLHGLCDNGKIEKALV 417
Query: 170 LLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQ---PDVWTMNSTL 226
+L+DM +G+ + VTYN +I KA ++ + +CQ PD+WT + +
Sbjct: 418 ILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL----NCQGLMPDIWTYTTMM 473
Query: 227 RAFGNLGQIDTMERCYDKFQTAGIQPN 253
G + + K + GI PN
Sbjct: 474 LGLYKKGLRREADALFRKMKEDGILPN 500
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 132/291 (45%), Gaps = 18/291 (6%)
Query: 32 GPINSKKLLPRTVLEALHERVTALRWESALKVFELL--REQLWYRPNSGVYIKLIVMLGK 89
GPI T E LH + + A K+ E++ Q+ + P+ L+ L +
Sbjct: 97 GPITEND--EETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCS---NLVRGLAR 151
Query: 90 CKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQ 149
Q +KA+ + + MV G V D +Y ++ + G + A LLE+M S G PDV
Sbjct: 152 IDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM-SLSGSPPDVI 210
Query: 150 TYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY----GKAKRFSEMEST 205
TY+ +I+ + ++ D +G P +TY L++ G A+ +E
Sbjct: 211 TYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDM 270
Query: 206 LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYG 265
VE C PD+ T NS + G ++ + + G++ N T+N LL S
Sbjct: 271 AVE-----GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Query: 266 KGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ-MEYLFRLM 315
+ ++ ++ M + Y T++TYNI+I+ KA L + +++ ++++
Sbjct: 326 SHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 109/262 (41%), Gaps = 37/262 (14%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y L+ ++ + +A+E+ + M EGC D +Y +L++ R G LE S+++ +
Sbjct: 247 YTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHIL 306
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS--------------DMAIHGIK----- 180
S G + + TY+ L+ S +D+V+ +L+ ++ I+G+
Sbjct: 307 SH-GLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLL 365
Query: 181 ----------------PNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNS 224
P+ VTYNT++ A K + L+ +L + C P + T NS
Sbjct: 366 SRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDD-AIELLGLLKNTCCPPGLITYNS 424
Query: 225 TLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYH 284
+ G + Y + AGI P+ T L+ + + + ++ V++
Sbjct: 425 VIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
Query: 285 YSWTIVTYNIVIDAFGKAGDLQ 306
TY +VI K +++
Sbjct: 485 NGIRGSTYRLVIQGLCKKKEIE 506
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 95/182 (52%), Gaps = 2/182 (1%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
+Y + LGK KQ +LF+ M +G D +Y L++++ R G ++ A ++ EE+
Sbjct: 444 MYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEEL 503
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
+ + C+PD+ +Y+ LI + D+ +M G+ P+ VTY+TL++ +GK +R
Sbjct: 504 ERS-DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTER 562
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFN 258
EM +L E + + CQP++ T N L G+ Y K + G+ P+ T+
Sbjct: 563 V-EMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYT 621
Query: 259 IL 260
+L
Sbjct: 622 VL 623
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 107/241 (44%), Gaps = 2/241 (0%)
Query: 78 GVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEE 137
G+Y L+ L K +A LF M + +SY ++L + +G A +L +
Sbjct: 373 GIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSK 432
Query: 138 MKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAK 197
+ G D Y+ + + ++ + L M G P+ TYN LI ++G+
Sbjct: 433 IHEK-GVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVG 491
Query: 198 RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF 257
E + E L DC+PD+ + NS + G G +D + + Q G+ P+V T+
Sbjct: 492 EVDE-AINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTY 550
Query: 258 NILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+ L++ +GK + ++ E M IVTYNI++D K G + L+ M+
Sbjct: 551 STLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQ 610
Query: 318 E 318
+
Sbjct: 611 Q 611
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 88/167 (52%), Gaps = 8/167 (4%)
Query: 24 IIDKRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKL 83
+ +K +K GP S + +L A RV + + A+ +FE L E+ +P+ Y L
Sbjct: 464 LFEKMKKDGP--SPDIFTYNILIASFGRVGEV--DEAINIFEEL-ERSDCKPDIISYNSL 518
Query: 84 IVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPG 143
I LGK ++A F+ M ++G D +Y+ L+ + ++ +E A+SL EEM G
Sbjct: 519 INCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM-LVKG 577
Query: 144 CQPDVQTYSILIKSCLEVFA-FDKVQGLLSDMAIHGIKPNTVTYNTL 189
CQP++ TY+IL+ CLE + L S M G+ P+++TY L
Sbjct: 578 CQPNIVTYNILL-DCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 37/275 (13%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
NS Y L+ + + KA +++ + G +D +Y LL A ++ E+A +
Sbjct: 202 NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKD---EKACQVF 258
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
E+MK C+ D TY+I+I++ + D+ GL ++M G+ N V YNTL+ K
Sbjct: 259 EDMKKR-HCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAK 317
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMN---STLRAFGNLGQIDTMERCYDKFQTAGIQP 252
K + M+ + C+P+ +T + + L A G L ++D + ++ T GI
Sbjct: 318 GKMVDKAIQVFSRMV-ETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYS 376
Query: 253 NV-----------QTFNILLDSYG---KGHDYKKMSAV------------MEYMQKYHYS 286
+ + + D + KG MS + +E + K H
Sbjct: 377 YLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEK 436
Query: 287 WTI---VTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ + YN V A GK + + LF M+ +
Sbjct: 437 GVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKD 471
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 141/325 (43%), Gaps = 51/325 (15%)
Query: 33 PINSKKLLPRTVLEALHERVTALRWESALKVFE-LLREQLWYRPNSGVYIKLIVMLGKCK 91
P SK L + LHE + AL++F+ ++R +L +PN + +++G +
Sbjct: 127 PPPSKALFDIALSAYLHEG----KPHVALQIFQKMIRLKL--KPN--LLTCNTLLIGLVR 178
Query: 92 QPEK-----ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
P A E+F MV G ++ +++ L++ Y G LE A +LE M S P
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNP 238
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
D TY+ ++K+ + ++ LL DM +G+ PN VTYN L+ Y K E +
Sbjct: 239 DNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEA-FQI 297
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS--- 263
VE++ + PD+ T N + N G + D ++ +QP+V T+N L+D
Sbjct: 298 VELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFE 357
Query: 264 YGKGHDYKKM---------------------------------SAVMEYMQKYHYSWTIV 290
G + +K+ V E + + +S IV
Sbjct: 358 LGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIV 417
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLM 315
TY+ +I A+ K GDL + R M
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREM 442
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 1/225 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y L+ K ++A ++ + M + D +Y L++ +G + L
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
++ MKS QPDV TY+ LI C E+ + + L+ M G+K N VT+N +
Sbjct: 333 MDAMKSLK-LQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLC 391
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
K ++ + + E++ PD+ T ++ ++A+ +G + + GI+ N
Sbjct: 392 KEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNT 451
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
T N +LD+ K + ++ K + VTY +I F
Sbjct: 452 ITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGF 496
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 93/202 (46%), Gaps = 4/202 (1%)
Query: 119 LSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCL---EVFAFDKVQGLLSDMA 175
LSAY G A + ++M +P++ T + L+ + F+ + + DM
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLK-LKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMV 196
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G+ N T+N L++ Y + + L M+++ PD T N+ L+A G++
Sbjct: 197 KIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRL 256
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
++ + G+ PN T+N L+ Y K K+ ++E M++ + + TYNI+
Sbjct: 257 SDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNIL 316
Query: 296 IDAFGKAGDLQQMEYLFRLMRS 317
I+ AG +++ L M+S
Sbjct: 317 INGLCNAGSMREGLELMDAMKS 338
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+ E AL++++ ++ ++ P + LI L + E A+E F + + G + D ++
Sbjct: 501 KVEKALEMWDEMK-KVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
+++ Y + G +E+AF E +PD T +IL+ + +K + +
Sbjct: 560 NSIILGYCKEGRVEKAFEFYNE-SIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTL- 617
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
I + +TVTYNT+I A+ K K+ E L EM ++ +PD +T NS + G++
Sbjct: 618 IEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEM-EEKGLEPDRFTYNSFISLLMEDGKL 676
Query: 236 DTMERCYDKF 245
+ KF
Sbjct: 677 SETDELLKKF 686
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 118/328 (35%), Gaps = 70/328 (21%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A ++ EL++ Q P+ Y LI L + LEL AM D +Y L+
Sbjct: 294 AFQIVELMK-QTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352
Query: 120 SAYSRSGLLERAFSLLEEMKS-----------------------------------TPGC 144
GL A L+E+M++ G
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGF 412
Query: 145 QPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMES 204
PD+ TY LIK+ L+V ++ +M GIK NT+T NT++DA K ++ E +
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 205 TL-------------------------------VEM---LADRDCQPDVWTMNSTLRAFG 230
L +EM + P V T NS +
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
+ G+ + +D+ +G+ P+ TFN ++ Y K +K K+ +
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNY 592
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
T NI+++ K G ++ F + E
Sbjct: 593 TCNILLNGLCKEGMTEKALNFFNTLIEE 620
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 9/254 (3%)
Query: 64 FELLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSA 121
E++RE Q + N+ ++ L K ++ ++A L + G +VD +Y L+
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMG 495
Query: 122 YSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKP 181
+ R +E+A + +EMK P V T++ LI + ++A G+ P
Sbjct: 496 FFREEKVEKALEMWDEMKKVK-ITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP 554
Query: 182 NTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERC 241
+ T+N++I Y K R + E + +PD +T N L G E+
Sbjct: 555 DDSTFNSIILGYCKEGRVEKAFEFYNESIK-HSFKPDNYTCNILLNGLCKEGMT---EKA 610
Query: 242 YDKFQTAGIQPNVQ--TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
+ F T + V T+N ++ ++ K K+ ++ M++ TYN I
Sbjct: 611 LNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Query: 300 GKAGDLQQMEYLFR 313
+ G L + + L +
Sbjct: 671 MEDGKLSETDELLK 684
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 117/267 (43%), Gaps = 4/267 (1%)
Query: 51 RVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVV 110
R T+ +L+ F R Y P S Y +L L K+ E ++ + M D +
Sbjct: 85 RATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDI 144
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
E+ ++ Y ++G +++A L + T GCQ V Y+ L+ + +V F L
Sbjct: 145 SGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYAL 204
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
+ M G+KP+ TY L++ + A + E + L EM + R P + +
Sbjct: 205 IRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEM-SRRGFNPPARGRDLLIEGLL 263
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
N G +++ + K G P++QTFNIL+++ K + + + K I
Sbjct: 264 NAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDID 323
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLMRS 317
TY +I A K G + + FRL+ +
Sbjct: 324 TYKTLIPAVSKIGKIDEA---FRLLNN 347
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 61/137 (44%), Gaps = 1/137 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ P+ + LI + K + E +E++ G VD ++Y L+ A S+ G ++ AF
Sbjct: 283 FVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAF 342
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
LL G +P Y+ +IK FD SDM + PN Y LI
Sbjct: 343 RLLNNCVED-GHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITM 401
Query: 193 YGKAKRFSEMESTLVEM 209
G+ +F + + LVEM
Sbjct: 402 CGRGGKFVDAANYLVEM 418
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 3/236 (1%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LI G +++++LFQ M G ++ +LLS + G A L +EM+ T
Sbjct: 144 LIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTY 203
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G PD T++ LI + D+ + DM ++ P+ VTYNT+ID +A +
Sbjct: 204 GVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 203 ESTLVEMLAD-RDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
+ L ML D P+V + + +R + +ID + + G++PN T+N L+
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 262 DSYGKGHDYKKMSAVMEYMQKYHYSWT--IVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ H Y ++ ++ ++ T+NI+I A AG L +F+ M
Sbjct: 324 KGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEM 379
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 108/262 (41%), Gaps = 13/262 (4%)
Query: 66 LLREQLWYRPNSGVYIKLIVMLGKCKQPE--KALELFQAMVDEGCVVDCESYTALLSAYS 123
+L++ PN Y L+ G C + E +A+ +F M+ G + +Y L+ S
Sbjct: 270 MLKKATDVHPNVVSYTTLVR--GYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLS 327
Query: 124 RSGLLERAFSLL-EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
+ + +L + PD T++ILIK+ + D + +M + P+
Sbjct: 328 EAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPD 387
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVE------MLADRDCQPDVWTMNSTLRAFGNLGQID 236
+ +Y+ LI F E+ E +L +C+P N G+
Sbjct: 388 SASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTK 447
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
E+ + + G+Q + ++ L+ + + +K ++ M + + + TY ++I
Sbjct: 448 QAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLI 506
Query: 297 DAFGKAGD-LQQMEYLFRLMRS 317
D K G+ L + L R++RS
Sbjct: 507 DGLLKIGEALLAHDTLQRMLRS 528
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 4/231 (1%)
Query: 91 KQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE--RAFSLLEEMKSTPGCQPDV 148
K P L F + ++G +S+ +L R+ L R F E +S +
Sbjct: 79 KVPADGLRFFDWVSNKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQD 138
Query: 149 QTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVE 208
+ ++ LI+S F + L M GI P+ +T+N+L+ K R E
Sbjct: 139 RYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDE 198
Query: 209 MLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGH 268
M PD +T N+ + F +D R + + P+V T+N ++D +
Sbjct: 199 MRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAG 258
Query: 269 DYKKMSAVMEYMQK--YHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
K V+ M K +V+Y ++ + ++ + +F M S
Sbjct: 259 KVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLS 309
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 95 KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSIL 154
+A+ F M D GCV D +++ ++S SR A S + +K +PDV Y+ L
Sbjct: 204 EAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR--FEPDVIVYTNL 261
Query: 155 IKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
++ + + + +M + GI+PN TY+ +IDA + + S +ML D
Sbjct: 262 VRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADML-DSG 320
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
C P+ T N+ +R G+ + + + Y++ + G +P+ T+N L++++ + + +
Sbjct: 321 CAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAV 380
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
V+ M K T+N + K D+ ++ M
Sbjct: 381 KVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKM 421
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 112/242 (46%), Gaps = 3/242 (1%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y +I L +C Q +A ++F M+D GC + ++ L+ + ++G E+ +
Sbjct: 288 PNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQV 347
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+MK GC+PD TY+ LI++ + +L+ M + N T+NT+ Y
Sbjct: 348 YNQMKKL-GCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIF-RYI 405
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+ KR + + + C+P+ T N +R F D + + + ++PNV
Sbjct: 406 EKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNV 465
Query: 255 QTFNILLDSY-GKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFR 313
T+ +L+ + G GH E +++ + ++ Y +V+ +AG L++ E L
Sbjct: 466 NTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVE 525
Query: 314 LM 315
M
Sbjct: 526 KM 527
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 51 RVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVV 110
V A R E L+V+ ++ +L P++ Y LI + + E A+++ M+ + C V
Sbjct: 335 HVKAGRTEKVLQVYNQMK-KLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEV 393
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
+ ++ + + + A + +M C+P+ TY+IL++ + + D V +
Sbjct: 394 NASTFNTIFRYIEKKRDVNGAHRMYSKMMEA-KCEPNTVTYNILMRMFVGSKSTDMVLKM 452
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
+M ++PN TY L+ + ++ EM+ ++ P + L
Sbjct: 453 KKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLR 512
Query: 231 NLGQIDTMERCYDKFQTAGI 250
GQ+ E +K G+
Sbjct: 513 RAGQLKKHEELVEKMIQKGL 532
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 3/232 (1%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN + LI K ++++F+ M+D+ + SY +L++ G + A S+
Sbjct: 294 PNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
++M S G QP++ TY+ LI + + + + G P T YN LIDAY
Sbjct: 354 RDKMVSA-GVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
K + + L E + PDV T N + G I+ ++ +D+ + G+ P++
Sbjct: 413 KLGKIDD-GFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDL 470
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
TF+IL++ Y + + +K + +++ M K +TYNIV+ + K G+L+
Sbjct: 471 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLK 522
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 37/198 (18%)
Query: 145 QPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY---GKAKRFSE 201
QP+V T++++I + + +K + ++ DM ++G PN V+YNTLID Y G + +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK 279
Query: 202 MESTLVEM----------------------------------LADRDCQPDVWTMNSTLR 227
++ L EM + D+D +P+V + NS +
Sbjct: 280 ADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLIN 339
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW 287
N G+I DK +AG+QPN+ T+N L++ + K K+ + ++
Sbjct: 340 GLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVP 399
Query: 288 TIVTYNIVIDAFGKAGDL 305
T YN++IDA+ K G +
Sbjct: 400 TTRMYNMLIDAYCKLGKI 417
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 125/260 (48%), Gaps = 13/260 (5%)
Query: 65 ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSR 124
E++R ++ +PN + +I L K + KA ++ + M GC + SY L+ Y +
Sbjct: 213 EMIRRKI--QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270
Query: 125 ---SGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKP 181
+G + +A ++L+EM P++ T++ILI + + +M +KP
Sbjct: 271 LGGNGKMYKADAVLKEMVEND-VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 182 NTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERC 241
N ++YN+LI+ + SE S +M++ QP++ T N+ + F + D ++
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVS-AGVQPNLITYNALINGF---CKNDMLKEA 385
Query: 242 YDKFQTA---GIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
D F + G P + +N+L+D+Y K A+ E M++ + TYN +I
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 299 FGKAGDLQQMEYLFRLMRSE 318
+ G+++ + LF + S+
Sbjct: 446 LCRNGNIEAAKKLFDQLTSK 465
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 115/245 (46%), Gaps = 9/245 (3%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+PN Y LI K ++AL++F ++ +G V Y L+ AY + G ++ F+
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L EEM+ G PDV TY+ LI + + L + G+ P+ VT++ L++ Y
Sbjct: 423 LKEEMERE-GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGY 480
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAF---GNLGQIDTMERCYDKFQTAGI 250
+ K S + L++ ++ +P T N ++ + GNL M +K + +
Sbjct: 481 CR-KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR--L 537
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME- 309
+ NV ++N+LL Y + + + ++ M + +TY IV + G + +E
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEG 597
Query: 310 YLFRL 314
+LF +
Sbjct: 598 HLFNV 602
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 94/203 (46%), Gaps = 3/203 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
+ AL +F ++ Q P + +Y LI K + + L + M EG V D +Y
Sbjct: 383 KEALDMFGSVKGQ-GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L++ R+G +E A L +++ S PD+ T+ IL++ K LL +M+
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKG--LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKM 499
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G+KP +TYN ++ Y K + +M +R + +V + N L+ + G+++
Sbjct: 500 GLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLED 559
Query: 238 MERCYDKFQTAGIQPNVQTFNIL 260
++ G+ PN T+ I+
Sbjct: 560 ANMLLNEMLEKGLVPNRITYEIV 582
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 6/219 (2%)
Query: 95 KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSIL 154
+A L MV +G +D +Y +++ + G + A +LL +M+ T +PDV YS +
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVIYSAI 302
Query: 155 IKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
I + Q L S+M GI PN TYN +ID + R+S+ + L +M+ +R+
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI-ERE 361
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
PDV T N+ + A G++ E+ D+ I P+ T+N ++ + K + +
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFR 313
+ + M S +VT+N +ID + +A + + L R
Sbjct: 422 HMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 9/269 (3%)
Query: 52 VTALRWESALKVFELLREQLWYR---PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGC 108
++A E L E L +++ +R P++ Y +I K + + A +F M
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP-- 430
Query: 109 VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQ 168
D ++ ++ Y R+ ++ LL E+ S G + TY+ LI EV + Q
Sbjct: 431 --DVVTFNTIIDVYCRAKRVDEGMQLLREI-SRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 169 GLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRA 228
L +M HG+ P+T+T N L+ + + ++ E L E++ D N +
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE-LFEVIQMSKIDLDTVAYNIIIHG 546
Query: 229 FGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWT 288
++D + G++P+VQT+N+++ + + + M+ +
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Query: 289 IVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
TYN +I KAG++ + L MRS
Sbjct: 607 NSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 17/266 (6%)
Query: 56 RWESALKVFELLREQLWYRPNSGVY-----IKLIVMLGKCKQPEKALELFQAMVDEGCVV 110
RW A + LLR+ + N V I V GK + EK L M+
Sbjct: 346 RWSDAQR---LLRDMIEREINPDVLTFNALISASVKEGKLFEAEK---LCDEMLHRCIFP 399
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
D +Y +++ + + + A + + M S PDV T++ +I D+ L
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
L +++ G+ NT TYNTLI + + + + EM++ C PD T N L F
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC-PDTITCNILLYGFC 513
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
+++ ++ Q + I + +NI++ KG + + + + +
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLMR 316
TYN++I F + LF M+
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMK 599
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 17/249 (6%)
Query: 82 KLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKST 141
K+I + + +P+ A+ L++ M ++ S+ L+ + L + S ++ +
Sbjct: 111 KVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKL-TK 169
Query: 142 PGCQPDVQTYSILIKS-CLE--------VFAFDKVQGLLSDMAIH------GIKPNTVTY 186
G QPDV T++ L+ CLE +F + G L +A+ G+ P +T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 187 NTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQ 246
NTLI+ R E + LV + + DV T + + +G + K +
Sbjct: 230 NTLINGLCLEGRVLEA-AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 247 TAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
I+P+V ++ ++D K + + M + + + TYN +ID F G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 307 QMEYLFRLM 315
+ L R M
Sbjct: 349 DAQRLLRDM 357
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 25/244 (10%)
Query: 91 KQPEKALELFQAMVDEG---CVVDCESYTALLSAYSRSGLLERAFSLLE--EMKSTPGCQ 145
K + A++ F MV VDC ++ + R + A SL E++ P
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDC---NKVIGVFVRMNRPDVAISLYRKMEIRRIP--- 138
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE---- 201
++ +++ILIK + + G +P+ VT+NTL+ R SE
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 202 ----MESTLVEMLADRD------CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQ 251
+E+ +E +A D P V T N+ + G++ +K G+
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLH 258
Query: 252 PNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
+V T+ +++ K D K ++ M++ H +V Y+ +ID K G +YL
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 312 FRLM 315
F M
Sbjct: 319 FSEM 322
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 6/132 (4%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCK--QPEKALELFQAMVDEGCVVDCE 113
+ E AL++FE+++ + + I++ G CK + ++A +LF ++ G D +
Sbjct: 517 KLEEALELFEVIQMS---KIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y ++S + + A L +MK G +PD TY+ LI+ CL+ DK L+S+
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDN-GHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 174 MAIHGIKPNTVT 185
M +G + T
Sbjct: 633 MRSNGFSGDAFT 644
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 114/245 (46%), Gaps = 3/245 (1%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P++ Y L+ + + A ++F M++ CVVD +Y ALL A +SG ++ + +
Sbjct: 206 PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKM 265
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+EM + G +PD +++I I + + +L M + + PN T+N +I
Sbjct: 266 FQEMGNL-GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLC 324
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
K ++ + L EM+ + PD WT NS + + +++ + + P+
Sbjct: 325 KNEKVDDAYLLLDEMI-QKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDR 383
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF-GKAGDLQQMEYLFR 313
T+N++L + + + + + E M + + T+ TY ++I K G L++ F
Sbjct: 384 HTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFE 443
Query: 314 LMRSE 318
+M E
Sbjct: 444 MMIDE 448
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 1/165 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN + +I L K ++ + A L M+ +G D +Y ++++ + + RA L
Sbjct: 311 PNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKL 370
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L M T C PD TY++++K + + FD+ + M+ P TY +I
Sbjct: 371 LSRMDRTK-CLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLV 429
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
+ K E EM+ D P T+ GQ+D ++
Sbjct: 430 RKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVD 474
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 96/251 (38%), Gaps = 47/251 (18%)
Query: 54 ALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEG---CVV 110
AL W+ ++ RE ++ +S V+ + + P +A F MV+ G CV
Sbjct: 119 ALLWDFLIEA----REYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVD 174
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
D + LL + + A + K G P +TYSIL++
Sbjct: 175 DLDQ---LLHSLCDKKHVNHAQEFFGKAKGF-GIVPSAKTYSILVRG------------- 217
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
+ + DA G K F EM +R+C D+ N+ L A
Sbjct: 218 ---------------WARIRDASGARKVFDEM--------LERNCVVDLLAYNALLDALC 254
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
G +D + + + G++P+ +F I + +Y D V++ M++Y +
Sbjct: 255 KSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVY 314
Query: 291 TYNIVIDAFGK 301
T+N +I K
Sbjct: 315 TFNHIIKTLCK 325
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 113/243 (46%), Gaps = 4/243 (1%)
Query: 66 LLREQLWYRPNSGVYIKLIVMLGKC--KQPEKALELFQAMVDEGCVVDCESYTALLSAYS 123
+ +E L + + V+ I++ G C + AL LF M +GC+ + +Y L+ Y
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 124 RSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNT 183
+ ++ F LL M + G +P++ +Y+++I +V +L++M G +
Sbjct: 252 KLRKIDDGFKLLRSM-ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDE 310
Query: 184 VTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYD 243
VTYNTLI Y K F + EML P V T S + + G ++ D
Sbjct: 311 VTYNTLIKGYCKEGNFHQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLD 369
Query: 244 KFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
+ + G+ PN +T+ L+D + + + V+ M +S ++VTYN +I+ G
Sbjct: 370 QMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTG 429
Query: 304 DLQ 306
++
Sbjct: 430 KME 432
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 111/239 (46%), Gaps = 8/239 (3%)
Query: 65 ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSR 124
E+LR L P+ Y LI + K +A+E M G + +YT L+ +S+
Sbjct: 335 EMLRHGLT--PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 125 SGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTV 184
G + A+ +L EM G P V TY+ LI + +L DM G+ P+ V
Sbjct: 393 KGYMNEAYRVLREMNDN-GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 185 TYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERC--Y 242
+Y+T++ + ++ E EM+ ++ +PD T +S ++ F Q T E C Y
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMV-EKGIKPDTITYSSLIQGFCE--QRRTKEACDLY 508
Query: 243 DKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
++ G+ P+ T+ L+++Y D +K + M + +VTY+++I+ K
Sbjct: 509 EEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 2/173 (1%)
Query: 144 CQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR-FSEM 202
C + +++KS + DK ++ HG P ++YN ++DA ++KR S
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
E+ EML + P+V+T N +R F G ID +DK +T G PNV T+N L+D
Sbjct: 190 ENVFKEML-ESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 263 SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
Y K ++ M +++YN+VI+ + G ++++ ++ M
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM 301
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 7/203 (3%)
Query: 108 CVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV---FAF 164
C + ++ +YSR L+++A S++ + G P V +Y+ ++ + + +F
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVH-LAQAHGFMPGVLSYNAVLDATIRSKRNISF 188
Query: 165 DKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNS 224
+ + +M + PN TYN LI + A ++ TL + + + C P+V T N+
Sbjct: 189 --AENVFKEMLESQVSPNVFTYNILIRGFCFAGNI-DVALTLFDKMETKGCLPNVVTYNT 245
Query: 225 TLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYH 284
+ + L +ID + G++PN+ ++N++++ + K++S V+ M +
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 285 YSWTIVTYNIVIDAFGKAGDLQQ 307
YS VTYN +I + K G+ Q
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQ 328
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 4/222 (1%)
Query: 88 GKCKQP--EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQ 145
G CK+ +AL + M+ G +YT+L+ + ++G + RA L++M+ C
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC- 377
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMEST 205
P+ +TY+ L+ + ++ +L +M +G P+ VTYN LI+ + + + +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 206 LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYG 265
L +M ++ PDV + ++ L F +D R + GI+P+ T++ L+ +
Sbjct: 438 LEDM-KEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 266 KGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+ K+ + E M + TY +I+A+ GDL++
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 108/233 (46%), Gaps = 2/233 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y LI K ++ + +L ++M +G + SY +++ R G ++ +
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L EM G D TY+ LIK + F + + ++M HG+ P+ +TY +LI +
Sbjct: 298 LTEMNRR-GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
KA + L +M C P+ T + + F G ++ R + G P+V
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSV 415
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
T+N L++ + + AV+E M++ S +V+Y+ V+ F ++ D+ +
Sbjct: 416 VTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 126/272 (46%), Gaps = 9/272 (3%)
Query: 46 EALHERVTA--LRWESALKVFELLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQ 101
+ L E V A L E A VF+ L+E L Y S V+ ++ + +KAL +
Sbjct: 100 QILAEDVAAKTLDDEYASLVFKSLQETYDLCY-STSSVFDLVVKSYSRLSLIDKALSIVH 158
Query: 102 AMVDEGCVVDCESYTALLSAYSRSGL-LERAFSLLEEMKSTPGCQPDVQTYSILIKSCLE 160
G + SY A+L A RS + A ++ +EM + P+V TY+ILI+
Sbjct: 159 LAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ-VSPNVFTYNILIRGFCF 217
Query: 161 VFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVW 220
D L M G PN VTYNTLID Y K ++ + L+ +A + +P++
Sbjct: 218 AGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD-GFKLLRSMALKGLEPNLI 276
Query: 221 TMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYM 280
+ N + G++ + + G + T+N L+ Y K ++ + + M
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336
Query: 281 QKYHYSWTIVTYNIVIDAFGKAGDLQQ-MEYL 311
++ + +++TY +I + KAG++ + ME+L
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 8/240 (3%)
Query: 64 FELLREQLW--YRPNSGVYIKLIVMLGKCKQP--EKALELFQAMVDEGCVVDCESYTALL 119
F+LLR PN Y +V+ G C++ ++ + M G +D +Y L+
Sbjct: 260 FKLLRSMALKGLEPNLISYN--VVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
Y + G +A + EM G P V TY+ LI S + ++ L M + G+
Sbjct: 318 KGYCKEGNFHQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
PN TY TL+D + + +E L EM D P V T N+ + G+++
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREM-NDNGFSPSVVTYNALINGHCVTGKMEDAI 435
Query: 240 RCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
+ + G+ P+V +++ +L + + +D + V M + +TY+ +I F
Sbjct: 436 AVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGF 495
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 42/244 (17%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPE--KALELFQAMVDEGCVVDCESY 115
+ A KVFE +RE+ + PN + L + G C++ + +A E+ M + G D +
Sbjct: 219 KEASKVFEDMREK--FPPNLRYFTSL--LYGWCREGKLMEAKEVLVQMKEAGLEPDIVVF 274
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTP--------------------------------- 142
T LLS Y+ +G + A+ L+ +M+
Sbjct: 275 TNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEME 334
Query: 143 --GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS 200
GC+ D+ TY+ LI + DK +L DM G+ P+ VTY ++ A+ K ++F
Sbjct: 335 RYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFE 394
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
E L+E + R C PD+ N +R LG++ R +++ + G+ P V TF I+
Sbjct: 395 EC-LELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIM 453
Query: 261 LDSY 264
++ +
Sbjct: 454 INGF 457
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 118/259 (45%), Gaps = 6/259 (2%)
Query: 62 KVFELLREQLWY--RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
K E+L E Y P+ V+ L+ L K ++A ++F+ M E + +T+LL
Sbjct: 185 KAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM-REKFPPNLRYFTSLL 243
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+ R G L A +L +MK G +PD+ ++ L+ L++DM G
Sbjct: 244 YGWCREGKLMEAKEVLVQMKEA-GLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGF 302
Query: 180 KPNTVTYNTLIDAYGKA-KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTM 238
+PN Y LI A + KR E VEM C+ D+ T + + F G ID
Sbjct: 303 EPNVNCYTVLIQALCRTEKRMDEAMRVFVEM-ERYGCEADIVTYTALISGFCKWGMIDKG 361
Query: 239 ERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
D + G+ P+ T+ ++ ++ K +++ ++E M++ ++ YN+VI
Sbjct: 362 YSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRL 421
Query: 299 FGKAGDLQQMEYLFRLMRS 317
K G++++ L+ M +
Sbjct: 422 ACKLGEVKEAVRLWNEMEA 440
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 40/277 (14%)
Query: 41 PRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELF 100
P T + +H+ + + +LK L + Y P+ + ++ + K Q + A ++
Sbjct: 21 PFTCNKHIHQLINSNCGILSLKFLAYLVSR-GYTPHRSSFNSVVSFVCKLGQVKFAEDIV 79
Query: 101 QAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPG--CQPDVQTYSILIKSC 158
+M GC D SY +L+ + R+G + A +LE ++++ G C+PD+
Sbjct: 80 HSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDI---------- 129
Query: 159 LEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
V++N+L + + K K E+ + ML + C P+
Sbjct: 130 -------------------------VSFNSLFNGFSKMKMLDEVFVYMGVML--KCCSPN 162
Query: 219 VWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVME 278
V T ++ + F G++ + + + + PNV TF L+D Y K D + ++ +
Sbjct: 163 VVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYK 222
Query: 279 YMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
M++ S +VTY +ID F K G++Q+ E ++ M
Sbjct: 223 EMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM 259
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 136/343 (39%), Gaps = 63/343 (18%)
Query: 22 KAIIDKRRKKGPINSKKLLPRTVLEALHERVTA---LRWESALKVF---ELLREQLWY-- 73
++ID + G I S L+ + L A H + + + S F ++L E Y
Sbjct: 95 NSLIDGHCRNGDIRSASLVLES-LRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMG 153
Query: 74 ------RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGL 127
PN Y I K + + AL+ F +M + + ++T L+ Y ++G
Sbjct: 154 VMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGD 213
Query: 128 LERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYN 187
LE A SL +EM+ +V TY+ LI + + + + S M ++PN++ Y
Sbjct: 214 LEVAVSLYKEMRRVR-MSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYT 272
Query: 188 TLIDAY--------------------------------------GKAKRFSEMESTLVEM 209
T+ID + GK K +E +VE
Sbjct: 273 TIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATE----IVED 328
Query: 210 LADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHD 269
+ D PD+ + + A+ G++ Y K G +P+V + ++D K
Sbjct: 329 MEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQ 388
Query: 270 YKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+ + V ++K + V Y ++IDA K GD ++E LF
Sbjct: 389 LHE-AIVYFCIEKAND----VMYTVLIDALCKEGDFIEVERLF 426
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Query: 168 QGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD--CQPDVWTMNST 225
+ ++ M G +P+ ++YN+LID + + L + A C+PD+ + NS
Sbjct: 76 EDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSL 135
Query: 226 LRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHY 285
F + +D + Y PNV T++ +D++ K + + M++
Sbjct: 136 FNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDAL 194
Query: 286 SWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
S +VT+ +ID + KAGDL+ L++ MR
Sbjct: 195 SPNVVTFTCLIDGYCKAGDLEVAVSLYKEMR 225
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Query: 64 FELLREQLWYR--PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSA 121
E++ E L R P+ L+ L K + E+AL L + +VD G + Y AL+ +
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 122 YSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKP 181
+ A L + M G +P+ TYSILI D L +M G+K
Sbjct: 377 LCKGRKFHEAELLFDRMGKI-GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKL 435
Query: 182 NTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERC 241
+ YN+LI+ + K S E + EM+ ++ +P V T S + + + G+I+ R
Sbjct: 436 SVYPYNSLINGHCKFGDISAAEGFMAEMI-NKKLEPTVVTYTSLMGGYCSKGKINKALRL 494
Query: 242 YDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
Y + GI P++ TF LL + + + M +++ VTYN++I+ + +
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE 554
Query: 302 AGDLQQ-MEYL 311
GD+ + E+L
Sbjct: 555 EGDMSKAFEFL 565
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 115/255 (45%), Gaps = 2/255 (0%)
Query: 52 VTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVD 111
V + R + VF+++ ++ P L+ L K + A+ELF MV G D
Sbjct: 167 VRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPD 226
Query: 112 CESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
YT ++ + L RA ++ M++T GC ++ Y++LI + + G+
Sbjct: 227 VYIYTGVIRSLCELKDLSRAKEMIAHMEAT-GCDVNIVPYNVLIDGLCKKQKVWEAVGIK 285
Query: 172 SDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
D+A +KP+ VTY TL+ K + F + EML R P ++S +
Sbjct: 286 KDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR-FSPSEAAVSSLVEGLRK 344
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVT 291
G+I+ + G+ PN+ +N L+DS KG + + + + M K VT
Sbjct: 345 RGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVT 404
Query: 292 YNIVIDAFGKAGDLQ 306
Y+I+ID F + G L
Sbjct: 405 YSILIDMFCRRGKLD 419
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 112/257 (43%), Gaps = 6/257 (2%)
Query: 62 KVFELLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
K FE L+E + P++ Y LI L Q +A + C ++ YT LL
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+ R G LE A S+ +EM G D+ Y +LI L+ GLL +M G+
Sbjct: 620 HGFCREGKLEEALSVCQEMVQR-GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
KP+ V Y ++IDA K F E + +++ + C P+ T + + G ++ E
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFG-IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 240 RCYDKFQTAGIQPNVQTFNILLDSYGKGH-DYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
K Q PN T+ LD KG D +K + + K + T TYN++I
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANT-ATYNMLIRG 796
Query: 299 FGKAGDLQQMEYLFRLM 315
F + G +++ L M
Sbjct: 797 FCRQGRIEEASELITRM 813
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 6/237 (2%)
Query: 85 VMLGKCKQPE--KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
+M G C + + KAL L+ M +G ++T LLS R+GL+ A L EM +
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEW 536
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
+P+ TY+++I+ E K L +M GI P+T +Y LI + SE
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID-TMERCYDKFQTAGIQPNVQTFNILL 261
+ V+ L +C+ + L F G+++ + C + Q G+ ++ + +L+
Sbjct: 597 K-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR-GVDLDLVCYGVLI 654
Query: 262 DSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
D K D K +++ M V Y +IDA K GD ++ ++ LM +E
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 126/319 (39%), Gaps = 40/319 (12%)
Query: 34 INSKKLLP--RTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCK 91
I LLP RT+ LH V + A+++F + + RP+ +Y +I L + K
Sbjct: 183 ITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMV-SVGIRPDVYIYTGVIRSLCELK 241
Query: 92 QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTY 151
+A E+ M GC V+ Y L+ + + A + +++ + +PDV TY
Sbjct: 242 DLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDL-AGKDLKPDVVTY 300
Query: 152 SILIKSCLEVFAFD-----------------------KVQGLLSDMAIH----------- 177
L+ +V F+ V+GL I
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
Query: 178 -GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
G+ PN YN LID+ K ++F E E L + + +P+ T + + F G++D
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAE-LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLD 419
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
T + G++ +V +N L++ + K D M M T+VTY ++
Sbjct: 420 TALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLM 479
Query: 297 DAFGKAGDLQQMEYLFRLM 315
+ G + + L+ M
Sbjct: 480 GGYCSKGKINKALRLYHEM 498
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 92/219 (42%), Gaps = 4/219 (1%)
Query: 88 GKCKQPE-KALELFQA-MVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQ 145
G CK + A E F A M+++ +YT+L+ Y G + +A L EM + G
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM-TGKGIA 504
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMEST 205
P + T++ L+ L ++MA +KPN VTYN +I+ Y + S+
Sbjct: 505 PSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEF 564
Query: 206 LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYG 265
L EM ++ PD ++ + GQ + D + N + LL +
Sbjct: 565 LKEM-TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 266 KGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
+ ++ +V + M + +V Y ++ID K D
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD 662
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 64 FELLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSA 121
F LL+E +P+ +Y +I K ++A ++ M++EGCV + +YTA+++
Sbjct: 667 FGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 122 YSRSGLLERAFSLLEEMKSTPGCQPDVQTYS----ILIKSCLEVFAFDKVQGLLSDMAIH 177
++G + A L +M+ P+ TY IL K EV V+ L + +
Sbjct: 727 LCKAGFVNEAEVLCSKMQPVSSV-PNQVTYGCFLDILTKG--EVDMQKAVE--LHNAILK 781
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G+ NT TYN LI + + R E + M+ D PD T + + +
Sbjct: 782 GLLANTATYNMLIRGFCRQGRIEEASELITRMIGD-GVSPDCITYTTMINELCRRNDVKK 840
Query: 238 MERCYDKFQTAGIQPNVQTFNILL 261
++ GI+P+ +N L+
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLI 864
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 12/230 (5%)
Query: 84 IVMLGKCKQPEKAL--ELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKST 141
+++ G K ++ L L + M D G D YT+++ A S++G + AF + + M +
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMIN- 710
Query: 142 PGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKA----K 197
GC P+ TY+ +I + ++ + L S M PN VTY +D K +
Sbjct: 711 EGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQ 770
Query: 198 RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF 257
+ E+ + +++ L + T N +R F G+I+ + G+ P+ T+
Sbjct: 771 KAVELHNAILKGLL-----ANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825
Query: 258 NILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+++ + +D KK + M + V YN +I AG++ +
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGK 875
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 3/137 (2%)
Query: 75 PNSGVYIKLIVMLGKCK-QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
PN Y + +L K + +KA+EL A++ +G + + +Y L+ + R G +E A
Sbjct: 750 PNQVTYGCFLDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASE 808
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L+ M G PD TY+ +I K L + M GI+P+ V YNTLI
Sbjct: 809 LITRMIGD-GVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGC 867
Query: 194 GKAKRFSEMESTLVEML 210
A + EML
Sbjct: 868 CVAGEMGKATELRNEML 884
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
Query: 76 NSGVYIKLIVMLGKCKQP--EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
N+ Y LI G C+Q E+A EL M+ +G DC +YT +++ R +++A
Sbjct: 786 NTATYNMLI--RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIE 843
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
L M + G +PD Y+ LI C K L ++M G+ PN T T
Sbjct: 844 LWNSM-TEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 6/219 (2%)
Query: 95 KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSIL 154
+A L MV +G +D +Y +++ + G + A +LL +M+ T +PDV YS +
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH-IKPDVVIYSAI 302
Query: 155 IKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
I + Q L S+M GI PN TYN +ID + R+S+ + L +M+ +R+
Sbjct: 303 IDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI-ERE 361
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
PDV T N+ + A G++ E+ D+ I P+ T+N ++ + K + +
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAK 421
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFR 313
+ + M S +VT+N +ID + +A + + L R
Sbjct: 422 HMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLR 456
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 9/269 (3%)
Query: 52 VTALRWESALKVFELLREQLWYR---PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGC 108
++A E L E L +++ +R P++ Y +I K + + A +F M
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASP-- 430
Query: 109 VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQ 168
D ++ ++ Y R+ ++ LL E+ S G + TY+ LI EV + Q
Sbjct: 431 --DVVTFNTIIDVYCRAKRVDEGMQLLREI-SRRGLVANTTTYNTLIHGFCEVDNLNAAQ 487
Query: 169 GLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRA 228
L +M HG+ P+T+T N L+ + + ++ E L E++ D N +
Sbjct: 488 DLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE-LFEVIQMSKIDLDTVAYNIIIHG 546
Query: 229 FGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWT 288
++D + G++P+VQT+N+++ + + + M+ +
Sbjct: 547 MCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPD 606
Query: 289 IVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
TYN +I KAG++ + L MRS
Sbjct: 607 NSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 17/266 (6%)
Query: 56 RWESALKVFELLREQLWYRPNSGVY-----IKLIVMLGKCKQPEKALELFQAMVDEGCVV 110
RW A + LLR+ + N V I V GK + EK L M+
Sbjct: 346 RWSDAQR---LLRDMIEREINPDVLTFNALISASVKEGKLFEAEK---LCDEMLHRCIFP 399
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
D +Y +++ + + + A + + M S PDV T++ +I D+ L
Sbjct: 400 DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-----PDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
L +++ G+ NT TYNTLI + + + + EM++ C PD T N L F
Sbjct: 455 LREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC-PDTITCNILLYGFC 513
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
+++ ++ Q + I + +NI++ KG + + + + +
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLMR 316
TYN++I F + LF M+
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMK 599
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 90/215 (41%), Gaps = 4/215 (1%)
Query: 65 ELLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
+LLRE + N+ Y LI + A +LFQ M+ G D + LL +
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 512
Query: 123 SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
+ LE A L E ++ + D Y+I+I + D+ L + IHG++P+
Sbjct: 513 CENEKLEEALELFEVIQMSK-IDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPD 571
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY 242
TYN +I + S+ + L + D +PD T N+ +R G+ID
Sbjct: 572 VQTYNVMISGFCGKSAISD-ANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELI 630
Query: 243 DKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM 277
+ ++ G + T ++ D G K S ++
Sbjct: 631 SEMRSNGFSGDAFTIKMVADLITDGRLDKSFSDML 665
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 105/249 (42%), Gaps = 17/249 (6%)
Query: 82 KLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKST 141
K+I + + +P+ A+ L++ M ++ S+ L+ + L + S ++ +
Sbjct: 111 KVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKL-TK 169
Query: 142 PGCQPDVQTYSILIKS-CLE--------VFAFDKVQGLLSDMAIH------GIKPNTVTY 186
G QPDV T++ L+ CLE +F + G L +A+ G+ P +T+
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITF 229
Query: 187 NTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQ 246
NTLI+ R E + LV + + DV T + + +G + K +
Sbjct: 230 NTLINGLCLEGRVLE-AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 247 TAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
I+P+V ++ ++D K + + M + + + TYN +ID F G
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 307 QMEYLFRLM 315
+ L R M
Sbjct: 349 DAQRLLRDM 357
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 75/154 (48%), Gaps = 9/154 (5%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCK--QPEKALELFQAMVDEGCVVDCE 113
+ E AL++FE+++ + + I++ G CK + ++A +LF ++ G D +
Sbjct: 517 KLEEALELFEVIQ---MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y ++S + + A L +MK G +PD TY+ LI+ CL+ DK L+S+
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDN-GHEPDNSTYNTLIRGCLKAGEIDKSIELISE 632
Query: 174 MAIHGIKPNTVTYNTLIDAYGKA---KRFSEMES 204
M +G + T + D K FS+M S
Sbjct: 633 MRSNGFSGDAFTIKMVADLITDGRLDKSFSDMLS 666
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 99/244 (40%), Gaps = 25/244 (10%)
Query: 91 KQPEKALELFQAMVDEG---CVVDCESYTALLSAYSRSGLLERAFSLLE--EMKSTPGCQ 145
K + A++ F MV VDC ++ + R + A SL E++ P
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCNK---VIGVFVRMNRPDVAISLYRKMEIRRIP--- 138
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE---- 201
++ +++ILIK + + G +P+ VT+NTL+ R SE
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 202 ----MESTLVEMLADRD------CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQ 251
+E+ +E +A D P V T N+ + G++ +K G+
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLH 258
Query: 252 PNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
+V T+ +++ K D K ++ M++ H +V Y+ +ID K G +YL
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYL 318
Query: 312 FRLM 315
F M
Sbjct: 319 FSEM 322
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 115/250 (46%), Gaps = 5/250 (2%)
Query: 63 VFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
+F+ L+E+ + PN Y L+ + + +A ++ M+D+G D ++ +L
Sbjct: 286 LFDKLKER--FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGL 343
Query: 123 SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
RS A L MKS C P+V++Y+I+I+ + + + DM G++P+
Sbjct: 344 LRSRKKSDAIKLFHVMKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY 242
Y LI +G K+ + L EM ++ PD T N+ ++ N + R Y
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEM-QEKGHPPDGKTYNALIKLMANQKMPEHATRIY 461
Query: 243 DKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF-GK 301
+K I+P++ TFN+++ SY +Y+ AV E M K +Y ++I G+
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGE 521
Query: 302 AGDLQQMEYL 311
+ YL
Sbjct: 522 GKSREACRYL 531
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 91 KQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQT 150
K+ +KA+ +F+ M + E+ LL + R+ L + A L +++K P++ T
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMT 300
Query: 151 YSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEML 210
Y++L+ V + + +DM G+KP+ V +N +++ ++++ S+ M
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMK 360
Query: 211 ADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDY 270
+ C P+V + +R F ++T +D +G+QP+ + L+ +G
Sbjct: 361 SKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 271 KKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ +++ MQ+ + TYN +I
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 9/184 (4%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQP--EKALELFQAMVDEGCVVDCESYTA 117
A+K+F +++ + P V I++ CKQ E A+E F MVD G D YT
Sbjct: 352 AIKLFHVMKSK---GPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L++ + L+ + LL+EM+ G PD +TY+ LIK + + + M +
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEK-GHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQN 467
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
I+P+ T+N ++ +Y A+ + + EM+ C PD + +R G +G+ +
Sbjct: 468 EIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC-PDDNSYTVLIR--GLIGEGKS 524
Query: 238 MERC 241
E C
Sbjct: 525 REAC 528
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Query: 106 EGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFD 165
+G D +Y +++S +++ E S+LEEM T G ++T++I +K+
Sbjct: 189 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLT-METFTIAMKAFAAAKERK 246
Query: 166 KVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNST 225
K G+ M + K T N L+D+ G+AK E + L + L +R P++ T
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKER-FTPNMMTYTVL 304
Query: 226 LRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHY 285
L + + + R ++ G++P++ N++L+ + + M+
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 364
Query: 286 SWTIVTYNIVIDAFGKAGDLQQ-MEYL 311
+ +Y I+I F K ++ +EY
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYF 391
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 6/255 (2%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E A+K+ R RPN VY + + +A +FQ + + G + DC YT
Sbjct: 358 EEAIKLIHSFR----LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
++ Y G ++AF + + G P + T +ILI +C + + + +M
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKS-GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G+K + VTYN L+ YGK + +++ + EM + PDV T N + + G ID
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS-AGISPDVATYNILIHSMVVRGYIDE 531
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ G P+ F ++ + K D+++ + YM +VT + ++
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 298 AFGKAGDLQQMEYLF 312
+ KA +++ LF
Sbjct: 592 GYCKAQRMEKAIVLF 606
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 85 VMLGKCKQ---PEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKST 141
+++G C + A +F+ M EG +D +Y L+ Y ++ L + F L++EM+S
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 142 PGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
G PDV TY+ILI S + D+ ++S++ G P+T+ + +I + K F E
Sbjct: 508 -GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE 566
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
L +AD +PDV T ++ L + +++ ++K AG++P+V +N L+
Sbjct: 567 -AFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 262 DSYGKGHDYKKMSAVMEYM 280
Y D +K ++ M
Sbjct: 626 HGYCSVGDIEKACELIGLM 644
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 5/225 (2%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
RP+ + I L K ++A + + G D S ++++ + + G E A
Sbjct: 303 RPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIK 362
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L+ + +P++ YS + + + + ++ G+ P+ V Y T+ID Y
Sbjct: 363 LIHSFR----LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
R + +L + P + T + A G I E + +T G++ +
Sbjct: 419 CNLGRTDKAFQYFGALLKSGN-PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 254 VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
V T+N L+ YGK H K+ +++ M+ S + TYNI+I +
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 111/280 (39%), Gaps = 32/280 (11%)
Query: 69 EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL 128
+Q P+ GV I L+ + + E A E + M+ G ++ + + Y G
Sbjct: 228 DQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYF 287
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
++ + LL MK G +PD+ +++ I + + +L + + GI ++V+ ++
Sbjct: 288 DKGWELLMGMKHY-GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSS 346
Query: 189 LIDAYGKAKRFSEM-------------------------------ESTLVEMLADRDCQP 217
+ID + K + E ST+ + + + P
Sbjct: 347 VIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 218 DVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM 277
D + + + NLG+ D + + +G P++ T IL+ + + +V
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 278 EYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
M+ +VTYN ++ +GK L ++ L MRS
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 6/255 (2%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E A+K+ R RPN VY + + +A +FQ + + G + DC YT
Sbjct: 358 EEAIKLIHSFR----LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTT 413
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
++ Y G ++AF + + G P + T +ILI +C + + + +M
Sbjct: 414 MIDGYCNLGRTDKAFQYFGALLKS-GNPPSLTTSTILIGACSRFGSISDAESVFRNMKTE 472
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G+K + VTYN L+ YGK + +++ + EM + PDV T N + + G ID
Sbjct: 473 GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS-AGISPDVATYNILIHSMVVRGYIDE 531
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ G P+ F ++ + K D+++ + YM +VT + ++
Sbjct: 532 ANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLH 591
Query: 298 AFGKAGDLQQMEYLF 312
+ KA +++ LF
Sbjct: 592 GYCKAQRMEKAIVLF 606
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 85 VMLGKCKQ---PEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKST 141
+++G C + A +F+ M EG +D +Y L+ Y ++ L + F L++EM+S
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA 507
Query: 142 PGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
G PDV TY+ILI S + D+ ++S++ G P+T+ + +I + K F E
Sbjct: 508 -GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE 566
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
L +AD +PDV T ++ L + +++ ++K AG++P+V +N L+
Sbjct: 567 -AFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLI 625
Query: 262 DSYGKGHDYKKMSAVMEYM 280
Y D +K ++ M
Sbjct: 626 HGYCSVGDIEKACELIGLM 644
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 96/225 (42%), Gaps = 5/225 (2%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
RP+ + I L K ++A + + G D S ++++ + + G E A
Sbjct: 303 RPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIK 362
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L+ + +P++ YS + + + + ++ G+ P+ V Y T+ID Y
Sbjct: 363 LIHSFR----LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
R + +L + P + T + A G I E + +T G++ +
Sbjct: 419 CNLGRTDKAFQYFGALLKSGN-PPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLD 477
Query: 254 VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
V T+N L+ YGK H K+ +++ M+ S + TYNI+I +
Sbjct: 478 VVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/280 (19%), Positives = 111/280 (39%), Gaps = 32/280 (11%)
Query: 69 EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL 128
+Q P+ GV I L+ + + E A E + M+ G ++ + + Y G
Sbjct: 228 DQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYF 287
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
++ + LL MK G +PD+ +++ I + + +L + + GI ++V+ ++
Sbjct: 288 DKGWELLMGMKHY-GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSS 346
Query: 189 LIDAYGKAKRFSEM-------------------------------ESTLVEMLADRDCQP 217
+ID + K + E ST+ + + + P
Sbjct: 347 VIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLP 406
Query: 218 DVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM 277
D + + + NLG+ D + + +G P++ T IL+ + + +V
Sbjct: 407 DCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVF 466
Query: 278 EYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
M+ +VTYN ++ +GK L ++ L MRS
Sbjct: 467 RNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 109/231 (47%), Gaps = 5/231 (2%)
Query: 81 IKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKS 140
++L V GK EK LF M + G D YT+L+S R G ++RAF L +E+ +
Sbjct: 301 MELSVKNGKMSDAEK---LFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL-T 356
Query: 141 TPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS 200
G P TY LI +V + L+++M G+ V +NTLID Y +
Sbjct: 357 EKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVD 416
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
E S + +++ + Q DV+T N+ F L + D ++ + G++ + ++ L
Sbjct: 417 E-ASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNL 475
Query: 261 LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
+D Y K + ++ + M +TYN++I A+ K G +++ L
Sbjct: 476 IDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKL 526
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 5/260 (1%)
Query: 57 WESALKVFE-LLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+E L+VF+ ++++ L S I +V K ++ + LE+F+ MVD G + S
Sbjct: 170 FEEGLRVFDYMVKKGLSIDERS--CIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
T ++ R G +E++ L++E S G +P+ TY+ +I + ++ F V+G+L M
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEF-SVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G+ N VTY L++ K + S+ E EM +R + DV S + G +
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM-RERGIESDVHVYTSLISWNCRKGNM 345
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+D+ G+ P+ T+ L+D K + +M MQ + T V +N +
Sbjct: 346 KRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 296 IDAFGKAGDLQQMEYLFRLM 315
ID + + G + + ++ +M
Sbjct: 406 IDGYCRKGMVDEASMIYDVM 425
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 106/226 (46%), Gaps = 4/226 (1%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
E+ L +F MV +G +D S L A + ++ + M + G + V + +I
Sbjct: 171 EEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDS-GVKITVYSLTI 229
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
+++ +K + L+ + ++ GIKP TYNT+I+AY K + FS +E L M D
Sbjct: 230 VVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDG 289
Query: 214 DCQPDV-WTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKK 272
V +T+ L G++ E+ +D+ + GI+ +V + L+ + + K+
Sbjct: 290 VVYNKVTYTLLMELSVKN--GKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347
Query: 273 MSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ + + + S + TY +ID K G++ E L M+S+
Sbjct: 348 AFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK 393
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y LI + K E+A LF M +G + +Y ++ AY + G ++ A L M+
Sbjct: 472 YTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANME 531
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
+ G PD TY+ LI D+ L S+M + G+ N+VTY +I KA +
Sbjct: 532 AN-GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 590
Query: 200 SE 201
E
Sbjct: 591 DE 592
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/300 (20%), Positives = 116/300 (38%), Gaps = 47/300 (15%)
Query: 42 RTVLEALHERVTALRW-------ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPE 94
R + +H + + W + A +F+ L E+ P+S Y LI + K +
Sbjct: 323 RGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEK-GLSPSSYTYGALIDGVCKVGEMG 381
Query: 95 KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSIL 154
A L M +G + + L+ Y R G+++ A S++ ++ G Q DV T +
Sbjct: 382 AAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEA-SMIYDVMEQKGFQADVFTCNT- 439
Query: 155 IKSC--------------------------------LEVFA----FDKVQGLLSDMAIHG 178
I SC ++V+ ++ + L +M+ G
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKG 499
Query: 179 IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTM 238
++PN +TYN +I AY K + E M A+ PD +T S + +D
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN-GMDPDSYTYTSLIHGECIADNVDEA 558
Query: 239 ERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
R + + G+ N T+ +++ K + + + M++ Y+ Y +I +
Sbjct: 559 MRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGS 618
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 112/244 (45%), Gaps = 2/244 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P + Y LI + K + EL M V+ +Y ++ SG L+ A+++
Sbjct: 380 PQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNI 439
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
++EM ++ GC+P+V Y+ LIK+ L+ F +L +M GI P+ YN+LI
Sbjct: 440 VKEMIAS-GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLS 498
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
KAKR E S LVEM+ + +P+ +T + + + + + ++ + + G+ PN
Sbjct: 499 KAKRMDEARSFLVEMV-ENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
L++ Y K + + M TY ++++ K + E +FR
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 315 MRSE 318
MR +
Sbjct: 618 MRGK 621
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 115/261 (44%), Gaps = 3/261 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R+ A++V + ++EQ P+ Y LI+ L K K+ ++A MV+ G + +Y
Sbjct: 467 RFGDAMRVLKEMKEQ-GIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
A +S Y + A ++EM+ G P+ + LI + + M
Sbjct: 526 GAFISGYIEASEFASADKYVKEMREC-GVLPNKVLCTGLINEYCKKGKVIEACSAYRSMV 584
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
GI + TY L++ K + + E EM + PDV++ + F LG +
Sbjct: 585 DQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRG-KGIAPDVFSYGVLINGFSKLGNM 643
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+D+ G+ PNV +N+LL + + + +K +++ M VTY +
Sbjct: 644 QKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTI 703
Query: 296 IDAFGKAGDLQQMEYLFRLMR 316
ID + K+GDL + LF M+
Sbjct: 704 IDGYCKSGDLAEAFRLFDEMK 724
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 117/244 (47%), Gaps = 11/244 (4%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y L+ L K + + A E+F+ M +G D SY L++ +S+ G +++A S+ +EM
Sbjct: 595 YTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM- 653
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
G P+V Y++L+ +K + LL +M++ G+ PN VTY T+ID Y K+
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQT--AGIQPNVQTF 257
+E EM + PD + + + L + ER F T G + F
Sbjct: 714 AEAFRLFDEMKL-KGLVPDSFVYTTLVDGCCRLNDV---ERAITIFGTNKKGCASSTAPF 769
Query: 258 NILLD---SYGKGH-DYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFR 313
N L++ +GK + ++ +M+ VTYNI+ID K G+L+ + LF
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 314 LMRS 317
M++
Sbjct: 830 QMQN 833
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 119/266 (44%), Gaps = 18/266 (6%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+ + A ++F +R + P+ Y LI K +KA +F MV+EG + Y
Sbjct: 607 KVDDAEEIFREMRGK-GIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIY 665
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
LL + RSG +E+A LL+EM S G P+ TY +I + + L +M
Sbjct: 666 NMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR-DCQPDVWTMNSTLRAFGNLGQ 234
+ G+ P++ Y TL+D R +++E + ++ C N+ + G+
Sbjct: 725 LKGLVPDSFVYTTLVDG---CCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGK 781
Query: 235 IDT--------MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYS 286
+ M+ +D+F +PN T+NI++D K + + + MQ +
Sbjct: 782 TELKTEVLNRLMDGSFDRFG----KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 287 WTIVTYNIVIDAFGKAGDLQQMEYLF 312
T++TY +++ + K G +M +F
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVF 863
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 110/242 (45%), Gaps = 7/242 (2%)
Query: 65 ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSR 124
E++ E L PN +Y L+ + + EKA EL M +G + +Y ++ Y +
Sbjct: 652 EMVEEGL--TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCK 709
Query: 125 SGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTV 184
SG L AF L +EMK G PD Y+ L+ C + ++ + G +T
Sbjct: 710 SGDLAEAFRLFDEMK-LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTA 767
Query: 185 TYNTLID---AYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERC 241
+N LI+ +GK + +E+ + L++ DR +P+ T N + G ++ +
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKEL 827
Query: 242 YDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
+ + Q A + P V T+ LL+ Y K +M V + + Y+++I+AF K
Sbjct: 828 FHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLK 887
Query: 302 AG 303
G
Sbjct: 888 EG 889
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/269 (20%), Positives = 116/269 (43%), Gaps = 33/269 (12%)
Query: 69 EQLWYRPNSGVYIKLIVMLGKCKQPEKAL----------ELFQAMVDEGCVVDCESYTAL 118
E+ + +S + ++L+ L +CK AL ++++ MV+ V D ++Y L
Sbjct: 168 EEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHML 227
Query: 119 LSAYSRSGLLE-------------RAFSL-------LEEMKSTPGCQPDVQTYSILIKSC 158
+ A+ R+G ++ R +L L+E G P TY +LI
Sbjct: 228 IIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGL 287
Query: 159 LEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR-DCQP 217
++ + + LL +M G+ + TY+ LID K + + + EM++ + +P
Sbjct: 288 CKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKP 347
Query: 218 DVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM 277
+ + + G ++ + +D +G+ P Q + L++ Y + + ++ ++
Sbjct: 348 --YMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELL 405
Query: 278 EYMQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
M+K + + TY V+ +GDL
Sbjct: 406 VEMKKRNIVISPYTYGTVVKGMCSSGDLD 434
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 9/267 (3%)
Query: 55 LRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCES 114
+ WE A+++FE + + Y N Y ++ +LGK + L+ M+ +G +
Sbjct: 165 IHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINST 224
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
Y L+ YS+ GL A L +M S G QPD T I+++ + F K +
Sbjct: 225 YGTLIDVYSKGGLKVHALCWLGKM-SKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKW 283
Query: 175 AIHGIKPN------TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRA 228
+ K + + TYNT+ID YGK+ + E T ML + P T N+ +
Sbjct: 284 SCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRML-EEGIVPTTVTFNTMIHI 342
Query: 229 FGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWT 288
+GN GQ+ + K P+ +T+NIL+ + K +D ++ A + M+
Sbjct: 343 YGNNGQLGEVTSLM-KTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPD 401
Query: 289 IVTYNIVIDAFGKAGDLQQMEYLFRLM 315
V+Y ++ AF +++ E L M
Sbjct: 402 PVSYRTLLYAFSIRHMVEEAEGLIAEM 428
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 117/264 (44%), Gaps = 6/264 (2%)
Query: 58 ESALKVFELLREQLWY--RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
+S K EL + Y P+ Y L+ +L P K + M + G V DC Y
Sbjct: 519 KSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPY 578
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
A++S++ + G L A + +EM +PDV Y +LI + + + + M
Sbjct: 579 CAVISSFVKLGQLNMAEEVYKEMVEY-NIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEML--ADRDCQPDVWTMNSTLRAFGNLG 233
GI N+V YN+LI Y K E E+ ++L ++ PDV+T N + +
Sbjct: 638 EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERS 697
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
+ E +D + G + N TF ++L Y K +++ + + + M++ ++YN
Sbjct: 698 MVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYN 756
Query: 294 IVIDAFGKAGDLQQMEYLFRLMRS 317
V+ F G ++ F+ M S
Sbjct: 757 SVLGLFALDGRFKEAVETFKEMVS 780
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 117/242 (48%), Gaps = 5/242 (2%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
+S Y +I GK Q ++A E F+ M++EG V ++ ++ Y +G L SL+
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLM 356
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+ MK C PD +TY+ILI + ++ +M G+KP+ V+Y TL+ A+
Sbjct: 357 KTMKLH--CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSI 414
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
E E + EM D + + D +T ++ R + ++ + +F AG + +
Sbjct: 415 RHMVEEAEGLIAEM-DDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSE 472
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
++ +D+YG+ + V Q+ + T++ YN++I A+G + ++ LF M
Sbjct: 473 GYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFESM 531
Query: 316 RS 317
S
Sbjct: 532 MS 533
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 41/230 (17%)
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
ERA + E KS + +V Y+I+++ + + VQ L +M GIKP TY T
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 189 LIDAYG-----------------------------------KAKRFSEMES-----TLVE 208
LID Y KA+ F + E + E
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 209 MLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGH 268
AD +T N+ + +G GQI + + GI P TFN ++ YG
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 269 DYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+++++M+ M K H + TYNI+I K D+++ F+ M+ +
Sbjct: 348 QLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDD 396
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 15/207 (7%)
Query: 113 ESYTALLSAYSRSGLL---ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQG 169
E Y+A + AY G L ER F +E+ + V Y+++IK+ + +K
Sbjct: 472 EGYSANIDAYGERGYLSEAERVFICCQEVN-----KRTVIEYNVMIKAYGISKSCEKACE 526
Query: 170 LLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLAD---RDCQPDVWTMNSTL 226
L M +G+ P+ TYNTL+ A + L +M DC P + +
Sbjct: 527 LFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYC----AVI 582
Query: 227 RAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYS 286
+F LGQ++ E Y + I+P+V + +L++++ + ++ + +E M++
Sbjct: 583 SSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIP 642
Query: 287 WTIVTYNIVIDAFGKAGDLQQMEYLFR 313
V YN +I + K G L + E ++R
Sbjct: 643 GNSVIYNSLIKLYTKVGYLDEAEAIYR 669
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 102/245 (41%), Gaps = 12/245 (4%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P++ Y LI + K E+A F+ M D+G D SY LL A+S ++E A L
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+ EM + D T S L + +E +K + G ++ Y+ IDAYG
Sbjct: 425 IAEMDDD-NVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYSANIDAYG 482
Query: 195 KAKRFSEMESTLVEMLADRDCQP----DVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
+ SE E + CQ V N ++A+G + ++ + G+
Sbjct: 483 ERGYLSEAERVFI------CCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGV 536
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEY 310
P+ T+N L+ K +E M++ Y + Y VI +F K G L E
Sbjct: 537 TPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEE 596
Query: 311 LFRLM 315
+++ M
Sbjct: 597 VYKEM 601
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 89/200 (44%), Gaps = 6/200 (3%)
Query: 65 ELLREQLWYR--PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
E+ +E + Y P+ VY LI ++A+ +AM + G + Y +L+ Y
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLY 655
Query: 123 SRSGLLERAFSLLEEM-KSTPGCQ-PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIK 180
++ G L+ A ++ ++ +S Q PDV T + +I E K + + M G +
Sbjct: 656 TKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-E 714
Query: 181 PNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMER 240
N T+ ++ Y K RF E + + + + + D + NS L F G+
Sbjct: 715 ANEFTFAMMLCMYKKNGRFEEA-TQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVE 773
Query: 241 CYDKFQTAGIQPNVQTFNIL 260
+ + ++GIQP+ TF L
Sbjct: 774 TFKEMVSSGIQPDDSTFKSL 793
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 110/244 (45%), Gaps = 2/244 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P Y LI L + E A L + + ++G V+D +Y L++ Y + G ++AF+L
Sbjct: 360 PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFAL 419
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+EM T G QP TY+ LI + L + G+KP+ V NTL+D +
Sbjct: 420 HDEMM-TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHC 478
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
S L EM PD T N +R G+ + + + GI+P+
Sbjct: 479 AIGNMDRAFSLLKEMDM-MSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDH 537
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
++N L+ Y K D K V + M ++ T++TYN ++ K + + E L R
Sbjct: 538 ISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLRE 597
Query: 315 MRSE 318
M+SE
Sbjct: 598 MKSE 601
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 14/281 (4%)
Query: 41 PRTVLEALHERVTALRWESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKC----KQPEK 95
P+ V + L E VT+ R S +F EL+ S + L+V +C + ++
Sbjct: 118 PKPVTQLLKEVVTS-RKNSIRNLFDELVLAHDRLETKSTILFDLLV---RCCCQLRMVDE 173
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
A+E F M ++G E+ +L+ SR +E A+ +M + +V T++I+I
Sbjct: 174 AIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME-IKSNVYTFNIMI 232
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
+ K +G L M + GIKP VTYNTL+ + R + EM +
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEM-KSKGF 291
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
QPD+ T N L N G+ + R + + G+ P+ ++NIL+ D + A
Sbjct: 292 QPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ M K T TYN +I ++ E L R +R
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIR 389
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 4/200 (2%)
Query: 60 ALKVFELLREQL--WYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
A K F L E + +P Y LI +L + + +A ELF+ +V +G D
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+ + G ++RAFSLL+EM PD TY+ L++ F++ + L+ +M
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMM-SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRR 531
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
GIKP+ ++YNTLI Y K EML+ P + T N+ L+ + +
Sbjct: 532 GIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLS-LGFNPTLLTYNALLKGLSKNQEGEL 590
Query: 238 MERCYDKFQTAGIQPNVQTF 257
E + ++ GI PN +F
Sbjct: 591 AEELLREMKSEGIVPNDSSF 610
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 107/235 (45%), Gaps = 10/235 (4%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
+ I ++ GK K+ + L + + + +V +Y L+ +S G +E A ++ EM
Sbjct: 230 IMINVLCKEGKLKKAKGFLGIMEVFGIKPTIV---TYNTLVQGFSLRGRIEGARLIISEM 286
Query: 139 KSTPGCQPDVQTYS-ILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAK 197
KS G QPD+QTY+ IL C E + +L +M G+ P++V+YN LI
Sbjct: 287 KSK-GFQPDMQTYNPILSWMCNE----GRASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 198 RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF 257
EM + + + P +T N+ + +I+ E + + GI + T+
Sbjct: 342 DL-EMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 400
Query: 258 NILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
NIL++ Y + D KK A+ + M T TY +I + ++ + LF
Sbjct: 401 NILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELF 455
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 117/262 (44%), Gaps = 13/262 (4%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
ESAL + + E+ + + +Y +I L K A LF M D+G D +Y+
Sbjct: 58 ESALNLLSKM-EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
++ ++ RSG A LL +M PDV T+S LI + ++ + + + DM
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQ-INPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
GI P T+TYN++ID + K R ++ + L M A + C PDV T ++ + + ++D
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSM-ASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI- 296
+ + GI N T+ L+ + + D ++ M + +T+ ++
Sbjct: 235 GMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Query: 297 ---------DAFGKAGDLQQME 309
AF DLQ+ E
Sbjct: 295 SLCSKKELRKAFAILEDLQKSE 316
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 105/241 (43%), Gaps = 8/241 (3%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y +I L K E AL L M + Y A++ + G A +L EM
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
G PDV TYS +I S + + LL DM I P+ VT++ LI+A K +
Sbjct: 104 D-KGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKV 162
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
SE E +ML R P T NS + F +++ +R D + P+V TF+
Sbjct: 163 SEAEEIYGDMLR-RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFST 221
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTI---VTYNIVIDAFGKAGDLQQMEYLFRLMR 316
L++ Y K K++ ME + H + VTY +I F + GDL + L +M
Sbjct: 222 LINGYCKA---KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Query: 317 S 317
S
Sbjct: 279 S 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 6/216 (2%)
Query: 103 MVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVF 162
MV+ GC D ++T L++ G + +A +L++ M G QP Y +I ++
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVE-EGHQP----YGTIINGLCKMG 55
Query: 163 AFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTM 222
+ LLS M IK + V YN +ID K ++ EM D+ PDV T
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEM-HDKGIFPDVITY 114
Query: 223 NSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQK 282
+ + +F G+ E+ I P+V TF+ L+++ K + + M +
Sbjct: 115 SGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLR 174
Query: 283 YHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
T +TYN +ID F K L + + M S+
Sbjct: 175 RGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 111/236 (47%), Gaps = 2/236 (0%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y ++I L K ++ E A F+ + GC +D ++Y L+ + GL +AF + E M+
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
T D TY ++I S + D L M ++P+ +++L+D+ GKA R
Sbjct: 306 KTDSLL-DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
+EM +P S + ++ G++DT R +D+ + +G +PN + +
Sbjct: 365 DTSMKVYMEM-QGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+++S+ K + V + M+K + T TY+ +++ +G + ++ M
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSM 479
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 123/266 (46%), Gaps = 15/266 (5%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCV---VDCES 114
++AL +F ++Q WY P+ Y+ L L + + LF+ MV + + +
Sbjct: 186 DAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFNA 245
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYS----ILIKSCLEVFAFDKVQGL 170
Y ++ +++ LE AF ++ + + GC+ D QTY+ + + L AF+ + +
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQES-GCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 171 -LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAF 229
+D + G TY +I + K+ R + L + + +R +P +S + +
Sbjct: 305 EKTDSLLDG-----STYELIIPSLAKSGRL-DAAFKLFQQMKERKLRPSFSVFSSLVDSM 358
Query: 230 GNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI 289
G G++DT + Y + Q G +P+ F L+DSY K + + M+K +
Sbjct: 359 GKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNF 418
Query: 290 VTYNIVIDAFGKAGDLQQMEYLFRLM 315
Y ++I++ K+G L+ +F+ M
Sbjct: 419 GLYTMIIESHAKSGKLEVAMTVFKDM 444
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/206 (20%), Positives = 94/206 (45%), Gaps = 38/206 (18%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R ++A K+F+ ++E+ RP+ V+ L+ +GK + + +++++ M G +
Sbjct: 328 RLDAAFKLFQQMKERK-LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMF 386
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
+L+ +Y+++G L+ A L +EMK + G +P+ Y+++I+S + + + DM
Sbjct: 387 VSLIDSYAKAGKLDTALRLWDEMKKS-GFRPNFGLYTMIIESHAKSGKLEVAMTVFKDME 445
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G P TY+ L++ + + GQ+
Sbjct: 446 KAGFLPTPSTYSCLLEMHAGS------------------------------------GQV 469
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILL 261
D+ + Y+ AG++P + ++ LL
Sbjct: 470 DSAMKIYNSMTNAGLRPGLSSYISLL 495
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 77/158 (48%), Gaps = 2/158 (1%)
Query: 54 ALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE 113
A R ++++KV+ + + +RP++ +++ LI K + + AL L+ M G +
Sbjct: 361 AGRLDTSMKVY-MEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFG 419
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
YT ++ ++++SG LE A ++ ++M+ G P TYS L++ D + +
Sbjct: 420 LYTMIIESHAKSGKLEVAMTVFKDMEKA-GFLPTPSTYSCLLEMHAGSGQVDSAMKIYNS 478
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA 211
M G++P +Y +L+ + L+EM A
Sbjct: 479 MTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKA 516
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 115/253 (45%), Gaps = 5/253 (1%)
Query: 56 RWESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCES 114
++E A +VF E+LR L P+S Y L++ K + ++F M V D
Sbjct: 320 KYERAKEVFAEMLRSGL--SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVC 377
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
+++++S ++RSG L++A +K G PD Y+ILI+ L ++M
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEA-GLIPDNVIYTILIQGYCRKGMISVAMNLRNEM 436
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
G + VTYNT++ K K E + EM +R PD +T+ + LG
Sbjct: 437 LQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEM-TERALFPDSYTLTILIDGHCKLGN 495
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNI 294
+ + K + I+ +V T+N LLD +GK D + M T ++Y+I
Sbjct: 496 LQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 295 VIDAFGKAGDLQQ 307
+++A G L +
Sbjct: 556 LVNALCSKGHLAE 568
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 113/240 (47%), Gaps = 6/240 (2%)
Query: 79 VYIKLIVMLGKCK--QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLE 136
VY I++ CK + EK + ++G D +Y L+SAYS GL+E AF L+
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 137 EMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKA 196
M G P V TY+ +I + +++ + + ++M G+ P++ TY +L+ K
Sbjct: 295 AMPG-KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 197 KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQT 256
E E +M + RD PD+ +S + F G +D ++ + AG+ P+
Sbjct: 354 GDVVETEKVFSDMRS-RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 257 FNILLDSYG-KGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ IL+ Y KG M+ E +Q+ + +VTYN ++ K L + + LF M
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQ-GCAMDVVTYNTILHGLCKRKMLGEADKLFNEM 471
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 4/246 (1%)
Query: 62 KVFELLREQLWYRPNSGVYIKLIVMLGKCKQP--EKALELFQAMVDEGCVVDCESYTALL 119
+ FEL+ + GVY V+ G CK E+A E+F M+ G D +Y +LL
Sbjct: 288 EAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLL 347
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+ G + + +M+S PD+ +S ++ DK + + G+
Sbjct: 348 MEACKKGDVVETEKVFSDMRSRD-VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
P+ V Y LI Y + S + EML + C DV T N+ L + +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEML-QQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 240 RCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
+ +++ + P+ T IL+D + K + + + + M++ +VTYN ++D F
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 300 GKAGDL 305
GK GD+
Sbjct: 526 GKVGDI 531
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 121/259 (46%), Gaps = 7/259 (2%)
Query: 62 KVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSA 121
KVF +R + P+ + ++ + + +KAL F ++ + G + D YT L+
Sbjct: 361 KVFSDMRSRDVV-PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 122 YSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKP 181
Y R G++ A +L EM GC DV TY+ ++ + + L ++M + P
Sbjct: 420 YCRKGMISVAMNLRNEMLQQ-GCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFP 478
Query: 182 NTVTYNTLIDAYGKAKRF-SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMER 240
++ T LID + K + ME L + + ++ + DV T N+ L FG +G IDT +
Sbjct: 479 DSYTLTILIDGHCKLGNLQNAME--LFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKE 536
Query: 241 CYDKFQTAGIQPNVQTFNILLDSY-GKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
+ + I P +++IL+++ KGH + E + K + T++ N +I +
Sbjct: 537 IWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISK-NIKPTVMICNSMIKGY 595
Query: 300 GKAGDLQQMEYLFRLMRSE 318
++G+ E M SE
Sbjct: 596 CRSGNASDGESFLEKMISE 614
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 118/257 (45%), Gaps = 19/257 (7%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCK--QPEKALELFQAMVDEGCVVDCESYTA 117
A K+F + E+ + P+S Y I++ G CK + A+ELFQ M ++ +D +Y
Sbjct: 464 ADKLFNEMTERALF-PDS--YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNT 520
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
LL + + G ++ A + +M S P +YSIL+ + + + +M
Sbjct: 521 LLDGFGKVGDIDTAKEIWADMVSKE-ILPTPISYSILVNALCSKGHLAEAFRVWDEMISK 579
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAF-------G 230
IKP + N++I Y ++ S+ ES L +M+++ PD + N+ + F
Sbjct: 580 NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISE-GFVPDCISYNTLIYGFVREENMSK 638
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
G + ME + G+ P+V T+N +L + + + K+ V+ M + +
Sbjct: 639 AFGLVKKMEE-----EQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRS 693
Query: 291 TYNIVIDAFGKAGDLQQ 307
TY +I+ F +L +
Sbjct: 694 TYTCMINGFVSQDNLTE 710
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 23/218 (10%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
++A+++F+ ++E+ R + Y L+ GK + A E++ MV + + SY+
Sbjct: 497 QNAMELFQKMKEK-RIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSI 555
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS-CLEVFAFDKVQGLLSDMAI 176
L++A G L AF + +EM S +P V + +IK C A D + L M
Sbjct: 556 LVNALCSKGHLAEAFRVWDEMIS-KNIKPTVMICNSMIKGYCRSGNASDG-ESFLEKMIS 613
Query: 177 HGIKPNTVTYNTLI----------DAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTL 226
G P+ ++YNTLI A+G K+ E + LV PDV+T NS L
Sbjct: 614 EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV---------PDVFTYNSIL 664
Query: 227 RAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY 264
F Q+ E K G+ P+ T+ +++ +
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGF 702
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 5/187 (2%)
Query: 131 AFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLI 190
AF+LL + G + + LI S + + + G+ +++ G+ N T N ++
Sbjct: 187 AFTLLR----SKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMV 242
Query: 191 DAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
+A K + ++ T + + ++ PD+ T N+ + A+ + G ++ + G
Sbjct: 243 NALCKDGKMEKV-GTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF 301
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEY 310
P V T+N +++ K Y++ V M + S TY ++ K GD+ + E
Sbjct: 302 SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEK 361
Query: 311 LFRLMRS 317
+F MRS
Sbjct: 362 VFSDMRS 368
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 7/187 (3%)
Query: 36 SKKLLPRTVLEALHERVTALRWESAL-KVFELLREQLWYRPNSGVYIKLIVMLGKCK--Q 92
SK++LP + ++ V AL + L + F + E + V I ++ G C+
Sbjct: 543 SKEILPTPISYSI--LVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600
Query: 93 PEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM-KSTPGCQPDVQTY 151
+ M+ EG V DC SY L+ + R + +AF L+++M + G PDV TY
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTY 660
Query: 152 SILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA 211
+ ++ + + +L M G+ P+ TY +I+ + +E EML
Sbjct: 661 NSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEML- 719
Query: 212 DRDCQPD 218
R PD
Sbjct: 720 QRGFSPD 726
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 125/261 (47%), Gaps = 11/261 (4%)
Query: 64 FELLREQLWYRPNSGVYIKLIVMLGKCK--QPEKALELFQAMVDEG----CVVDCESYTA 117
+E++R+ L + V I++ G+C+ + L L + M+ G ++ C +
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC---SV 368
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
+LS ++G ++ A SL +MK+ G PD+ YSI+I ++ FD L +M
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKA-DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
I PN+ T+ L+ + E S L +++ + D+ N + + G I+
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE-TLDIVLYNIVIDGYAKSGCIEE 486
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ GI P+V TFN L+ Y K + + +++ ++ Y + ++V+Y ++D
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 298 AFGKAGDLQQMEYLFRLMRSE 318
A+ G+ + ++ L R M++E
Sbjct: 547 AYANCGNTKSIDELRREMKAE 567
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
S+ +++S Y + G ++ A S + G P V +++ILI V + + L SD
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKC-GLVPSVYSHNILINGLCLVGSIAEALELASD 282
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M HG++P++VTYN L + S + +ML D+ PDV T L LG
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML-DKGLSPDVITYTILLCGQCQLG 341
Query: 234 QIDTMERCYDKFQTAGIQPN-VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
ID + G + N + +++L K + ++ M+ S +V Y
Sbjct: 342 NIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 401
Query: 293 NIVIDAFGKAGDLQQMEYLFRLM 315
+IVI K G +L+ M
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEM 424
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 114/287 (39%), Gaps = 51/287 (17%)
Query: 75 PNSGVYIKLIVMLGKCKQPE--KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
PNS + L +LG C++ +A L +++ G +D Y ++ Y++SG +E A
Sbjct: 431 PNSRTHGAL--LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L + + T G P V T++ LI + + + +L + ++G+ P+ V+Y TL+DA
Sbjct: 489 ELFKVVIET-GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 193 YGKAKRFSEMESTLVEMLAD---------------------------------------- 212
Y ++ EM A+
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 213 -RDCQ-----PDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
RD + PD T N+ ++ + + + ++ + + T+NIL+DS
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFR 313
+K + + +Q+ + S + Y +I A GD + LF
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 107/256 (41%), Gaps = 23/256 (8%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E AL++F+++ E P+ + LI K + +A ++ + G SYT
Sbjct: 485 EEALELFKVVIET-GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIK---------SCLEVF---AFD 165
L+ AY+ G + L EMK+ G P TYS++ K +C V F+
Sbjct: 544 LMDAYANCGNTKSIDELRREMKA-EGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 166 KVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNST 225
K + L DM GI P+ +TYNT+I + K S +E++ R+ T N
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG-AFVFLEIMKSRNLDASSATYNIL 661
Query: 226 LRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYK--KMSAVMEYMQKY 283
+ + G I R D F + + NV + K H K AV + Q
Sbjct: 662 IDSLCVYGYI----RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL 717
Query: 284 H--YSWTIVTYNIVID 297
H ++ +I Y+ VI+
Sbjct: 718 HRGFNVSIRDYSAVIN 733
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 125/261 (47%), Gaps = 11/261 (4%)
Query: 64 FELLREQLWYRPNSGVYIKLIVMLGKCK--QPEKALELFQAMVDEG----CVVDCESYTA 117
+E++R+ L + V I++ G+C+ + L L + M+ G ++ C +
Sbjct: 312 WEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC---SV 368
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
+LS ++G ++ A SL +MK+ G PD+ YSI+I ++ FD L +M
Sbjct: 369 MLSGLCKTGRIDEALSLFNQMKA-DGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDK 427
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
I PN+ T+ L+ + E S L +++ + D+ N + + G I+
Sbjct: 428 RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGE-TLDIVLYNIVIDGYAKSGCIEE 486
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ GI P+V TFN L+ Y K + + +++ ++ Y + ++V+Y ++D
Sbjct: 487 ALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMD 546
Query: 298 AFGKAGDLQQMEYLFRLMRSE 318
A+ G+ + ++ L R M++E
Sbjct: 547 AYANCGNTKSIDELRREMKAE 567
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 88/203 (43%), Gaps = 3/203 (1%)
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
S+ +++S Y + G ++ A S + G P V +++ILI V + + L SD
Sbjct: 224 SFNSIMSGYCKLGFVDMAKSFFCTVLKC-GLVPSVYSHNILINGLCLVGSIAEALELASD 282
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M HG++P++VTYN L + S + +ML D+ PDV T L LG
Sbjct: 283 MNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDML-DKGLSPDVITYTILLCGQCQLG 341
Query: 234 QIDTMERCYDKFQTAGIQPN-VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
ID + G + N + +++L K + ++ M+ S +V Y
Sbjct: 342 NIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAY 401
Query: 293 NIVIDAFGKAGDLQQMEYLFRLM 315
+IVI K G +L+ M
Sbjct: 402 SIVIHGLCKLGKFDMALWLYDEM 424
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 114/287 (39%), Gaps = 51/287 (17%)
Query: 75 PNSGVYIKLIVMLGKCKQPE--KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
PNS + L +LG C++ +A L +++ G +D Y ++ Y++SG +E A
Sbjct: 431 PNSRTHGAL--LLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEAL 488
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L + + T G P V T++ LI + + + +L + ++G+ P+ V+Y TL+DA
Sbjct: 489 ELFKVVIET-GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDA 547
Query: 193 YGKAKRFSEMESTLVEMLAD---------------------------------------- 212
Y ++ EM A+
Sbjct: 548 YANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQG 607
Query: 213 -RDCQ-----PDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
RD + PD T N+ ++ + + + ++ + + T+NIL+DS
Sbjct: 608 LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCV 667
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFR 313
+K + + +Q+ + S + Y +I A GD + LF
Sbjct: 668 YGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFH 714
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 107/256 (41%), Gaps = 23/256 (8%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E AL++F+++ E P+ + LI K + +A ++ + G SYT
Sbjct: 485 EEALELFKVVIET-GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTT 543
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIK---------SCLEVF---AFD 165
L+ AY+ G + L EMK+ G P TYS++ K +C V F+
Sbjct: 544 LMDAYANCGNTKSIDELRREMKA-EGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFE 602
Query: 166 KVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNST 225
K + L DM GI P+ +TYNT+I + K S +E++ R+ T N
Sbjct: 603 KCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSG-AFVFLEIMKSRNLDASSATYNIL 661
Query: 226 LRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYK--KMSAVMEYMQKY 283
+ + G I R D F + + NV + K H K AV + Q
Sbjct: 662 IDSLCVYGYI----RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLL 717
Query: 284 H--YSWTIVTYNIVID 297
H ++ +I Y+ VI+
Sbjct: 718 HRGFNVSIRDYSAVIN 733
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 120/263 (45%), Gaps = 7/263 (2%)
Query: 54 ALRWESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDC 112
A R+ A +++ +L++ + +P+ +Y LI L K + E AL+L +M +G D
Sbjct: 316 ARRYTQAFELYANMLKKNI--KPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDT 373
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
Y A++ A GLLE SL EM T PD T++ILI S + + + +
Sbjct: 374 YCYNAVIKALCGRGLLEEGRSLQLEMSETESF-PDACTHTILICSMCRNGLVREAEEIFT 432
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
++ G P+ T+N LID K+ E L +M R + +S R+F +
Sbjct: 433 EIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTM 492
Query: 233 ---GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI 289
G I R F G P++ ++N+L++ + + D ++ +Q S
Sbjct: 493 VESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDS 552
Query: 290 VTYNIVIDAFGKAGDLQQMEYLF 312
VTYN +I+ + G ++ LF
Sbjct: 553 VTYNTLINGLHRVGREEEAFKLF 575
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 98/244 (40%), Gaps = 3/244 (1%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL-ERAFSL 134
+S + LI K EKA+E F M + C D +Y +L R + AF++
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
EM C P++ T+ IL+ + Q + DM GI PN VTY LI
Sbjct: 186 YNEMLKC-NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLC 244
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+ + EM + PD N+ L F LG++ F+ G +
Sbjct: 245 QRGSADDARKLFYEMQTSGN-YPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGL 303
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
+ ++ L+D + Y + + M K + I+ Y I+I KAG ++ L
Sbjct: 304 RGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSS 363
Query: 315 MRSE 318
M S+
Sbjct: 364 MPSK 367
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%), Gaps = 2/241 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y LI L + + A +LF M G D ++ ALL + + G + AF L
Sbjct: 231 PNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL 290
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L + G ++ YS LI + + L ++M IKP+ + Y LI
Sbjct: 291 L-RLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLS 349
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
KA + + L M + PD + N+ ++A G ++ + P+
Sbjct: 350 KAGKIEDALKLLSSM-PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDA 408
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
T IL+ S + ++ + ++K S ++ T+N +ID K+G+L++ L
Sbjct: 409 CTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHK 468
Query: 315 M 315
M
Sbjct: 469 M 469
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 5/198 (2%)
Query: 107 GCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCL--EVFAF 164
G VD + L+SAY++ G+ E+A MK C+PDV TY+++++ + EVF F
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD-CRPDVFTYNVILRVMMREEVF-F 179
Query: 165 DKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNS 224
+ ++M PN T+ L+D K R S+ + +M R P+ T
Sbjct: 180 MLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTG-RGISPNRVTYTI 238
Query: 225 TLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYH 284
+ G D + + + QT+G P+ N LLD + K + ++ +K
Sbjct: 239 LISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDG 298
Query: 285 YSWTIVTYNIVIDAFGKA 302
+ + Y+ +ID +A
Sbjct: 299 FVLGLRGYSSLIDGLFRA 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 7/187 (3%)
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
LEE+KS G D + +LI + ++ +K M +P+ TYN ++
Sbjct: 115 LEELKSG-GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMM 173
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+ + F + + + +C P+++T + G+ ++ +D GI PN
Sbjct: 174 REEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNR 233
Query: 255 QTFNILLDSY---GKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
T+ IL+ G D +K+ M+ Y S V +N ++D F K G + + L
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDS---VAHNALLDGFCKLGRMVEAFEL 290
Query: 312 FRLMRSE 318
RL +
Sbjct: 291 LRLFEKD 297
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 114/241 (47%), Gaps = 5/241 (2%)
Query: 42 RTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQ 101
RT + +H + +L+VF+++R + P + LI L + +Q EKA+E+
Sbjct: 590 RTFMPIIHGYAKSGDMRRSLEVFDMMR-RCGCVPTVHTFNGLINGLVEKRQMEKAVEILD 648
Query: 102 AMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV 161
M G + +YT ++ Y+ G +AF +++ G D+ TY L+K+C +
Sbjct: 649 EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNE-GLDVDIFTYEALLKACCKS 707
Query: 162 FAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMEST-LVEMLADRDCQPDVW 220
+ +M+ I N+ YN LID + A+R E+ L++ + +PD+
Sbjct: 708 GRMQSALAVTKEMSARNIPRNSFVYNILIDGW--ARRGDVWEAADLIQQMKKEGVKPDIH 765
Query: 221 TMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYM 280
T S + A G ++ + ++ + G++PN++T+ L+ + + +K + E M
Sbjct: 766 TYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM 825
Query: 281 Q 281
+
Sbjct: 826 K 826
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 122/259 (47%), Gaps = 19/259 (7%)
Query: 57 WESALKVFE-LLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
W +A VFE +++E + +P+ +Y +I ++A++ + M ++
Sbjct: 535 WANAFAVFEDMVKEGM--KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
++ Y++SG + R+ + + M+ GC P V T++ LI +E +K +L +M
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRC-GCVPTVHTFNGLINGLVEKRQMEKAVEILDEMT 651
Query: 176 IHGIKPNTVTYNTLIDAY------GKA-KRFSEMESTLVEMLADRDCQPDVWTMNSTLRA 228
+ G+ N TY ++ Y GKA + F+ +++ +++ D++T + L+A
Sbjct: 652 LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDV--------DIFTYEALLKA 703
Query: 229 FGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWT 288
G++ + + I N +NIL+D + + D + + +++ M+K
Sbjct: 704 CCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPD 763
Query: 289 IVTYNIVIDAFGKAGDLQQ 307
I TY I A KAGD+ +
Sbjct: 764 IHTYTSFISACSKAGDMNR 782
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 2/188 (1%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
N Y K++ KA E F + +EG VD +Y ALL A +SG ++ A ++
Sbjct: 658 NEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+EM S + Y+ILI + L+ M G+KP+ TY + I A K
Sbjct: 718 KEM-SARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSK 776
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
A + T+ EM A +P++ T + ++ + + CY++ + GI+P+
Sbjct: 777 AGDMNRATQTIEEMEA-LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKA 835
Query: 256 TFNILLDS 263
++ LL S
Sbjct: 836 VYHCLLTS 843
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 101/224 (45%), Gaps = 2/224 (0%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
N+ +Y K+I + E+A L + M +EG Y ++ Y+ ++ +
Sbjct: 413 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVF 472
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+ +K G P V TY LI +V K + M G+K N TY+ +I+ + K
Sbjct: 473 KRLKEC-GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVK 531
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
K ++ + +M+ + +PDV N+ + AF +G +D + + Q +P +
Sbjct: 532 LKDWANAFAVFEDMVKE-GMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTR 590
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
TF ++ Y K D ++ V + M++ T+ T+N +I+
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL 634
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 122/296 (41%), Gaps = 42/296 (14%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
L VF+ L+E + P Y LI + K + KALE+ + M +EG + ++Y+ ++
Sbjct: 468 GLVVFKRLKE-CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+ + + AF++ E+M G +PDV Y+ +I + + D+ + +M
Sbjct: 527 NGFVKLKDWANAFAVFEDM-VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRH 585
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTL--VEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
+P T T+ +I Y K+ +M +L +M+ C P V T N + Q++
Sbjct: 586 RPTTRTFMPIIHGYAKS---GDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEK 642
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSY------GKGHDY--------------------- 270
D+ AG+ N T+ ++ Y GK +Y
Sbjct: 643 AVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLK 702
Query: 271 --------KKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ AV + M + YNI+ID + + GD+ + L + M+ E
Sbjct: 703 ACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE 758
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 113/250 (45%), Gaps = 7/250 (2%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A + FE +R + P S +Y LI + ++AL + M +EG + +Y+ ++
Sbjct: 328 ARETFERMRAR-GITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIV 386
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+S++G E A +E K + Y +I + + ++ + L+ +M GI
Sbjct: 387 GGFSKAGHAEAADYWFDEAKRIHKTL-NASIYGKIIYAHCQTCNMERAEALVREMEEEGI 445
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC--QPDVWTMNSTLRAFGNLGQIDT 237
Y+T++D Y ++ + LV ++C P V T + + +G+I
Sbjct: 446 DAPIAIYHTMMDGY---TMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISK 502
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ G++ N++T++++++ + K D+ AV E M K ++ YN +I
Sbjct: 503 ALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIS 562
Query: 298 AFGKAGDLQQ 307
AF G++ +
Sbjct: 563 AFCGMGNMDR 572
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R +SAL V + + + R NS VY LI + +A +L Q M EG D +Y
Sbjct: 709 RMQSALAVTKEMSARNIPR-NSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 767
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
T+ +SA S++G + RA +EEM++ G +P+++TY+ LIK +K +M
Sbjct: 768 TSFISACSKAGDMNRATQTIEEMEAL-GVKPNIKTYTTLIKGWARASLPEKALSCYEEMK 826
Query: 176 IHGIKPNTVTYNTLI 190
GIKP+ Y+ L+
Sbjct: 827 AMGIKPDKAVYHCLL 841
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 16/211 (7%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
+ ++ Y R G + RA E M++ G P + Y+ LI + D+ + M
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRAR-GITPTSRIYTSLIHAYAVGRDMDEALSCVRKM 370
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL-- 232
GI+ + VTY+ ++ + KA + E A R + T+N+++ +G +
Sbjct: 371 KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDE--AKRIHK----TLNASI--YGKIIY 422
Query: 233 --GQIDTMERC---YDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW 287
Q MER + + GI + ++ ++D Y D KK V + +++ ++
Sbjct: 423 AHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTP 482
Query: 288 TIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
T+VTY +I+ + K G + + + R+M+ E
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEE 513
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 9/129 (6%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
WE+A + ++ +E + +P+ Y I K +A + + M G + ++YT
Sbjct: 746 WEAADLIQQMKKEGV--KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 803
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCL------EVFAFDKVQGL 170
L+ ++R+ L E+A S EEMK+ G +PD Y L+ S L E + + V +
Sbjct: 804 TLIKGWARASLPEKALSCYEEMKAM-GIKPDKAVYHCLLTSLLSRASIAEAYIYSGVMTI 862
Query: 171 LSDMAIHGI 179
+M G+
Sbjct: 863 CKEMVEAGL 871
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 120/292 (41%), Gaps = 38/292 (13%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVD---- 111
R E A+ +F+ + + ++PN Y LI L K + A+ELF M G +
Sbjct: 168 RIEDAIALFDQIL-GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226
Query: 112 -------CE------------------------SYTALLSAYSRSGLLERAFSLLEEMKS 140
CE ++TAL+ A+ + G L A L M
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 141 TPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS 200
PDV TY LI D+ + + M +G PN V Y TLI + K+KR
Sbjct: 287 M-SVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
+ EM + + + T ++ + +G+ D + +++ + P+++T+N+L
Sbjct: 346 DGMKIFYEM-SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 261 LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
LD +K + EYM+K IVTY I+I K G ++ LF
Sbjct: 405 LDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF 456
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 105/249 (42%), Gaps = 2/249 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L + P+ + L+ + E A+ LF ++ G + +YT L+ ++ L
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A L +M T G +P+V TY+ L+ E+ + LL DM I+PN +T+ L
Sbjct: 206 HAVELFNQM-GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
IDA+ K + E + L ++ PDV+T S + G +D + + + G
Sbjct: 265 IDAFVKVGKLMEAKE-LYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
PN + L+ + K + + M + +TY ++I + G +
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383
Query: 310 YLFRLMRSE 318
+F M S
Sbjct: 384 EVFNQMSSR 392
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 100/224 (44%), Gaps = 2/224 (0%)
Query: 92 QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTY 151
Q AL+LF MV + +T LLS ++ + SL E+M+ G P + T
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQ-ILGIPPLLCTC 121
Query: 152 SILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA 211
+I++ + L M G +P+ VT+ +L++ Y R + L + +
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIED-AIALFDQIL 180
Query: 212 DRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYK 271
+P+V T + +R ++ +++ T G +PNV T+N L+ + +
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 272 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ ++ M K ++T+ +IDAF K G L + + L+ +M
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVM 284
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 3/196 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
+ A ++F L+ Y PN +Y LI K K+ E +++F M +G V + +YT
Sbjct: 310 DEARQMFYLMERNGCY-PNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTV 368
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+ Y G + A + +M S PD++TY++L+ +K + M
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRA-PPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKR 427
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
+ N VTY +I K + + + + + +P+V T + + F G I
Sbjct: 428 EMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS-KGMKPNVITYTTMISGFCRRGLIHE 486
Query: 238 MERCYDKFQTAGIQPN 253
+ + K + G PN
Sbjct: 487 ADSLFKKMKEDGFLPN 502
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 87/200 (43%), Gaps = 8/200 (4%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
Q+ P+ Y LI L ++A ++F M GC + YT L+ + +S +E
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
+ EM S G + TY++LI+ V D Q + + M+ P+ TYN L
Sbjct: 346 DGMKIFYEM-SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVL 404
Query: 190 IDAY---GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQ 246
+D GK E + E + R+ ++ T ++ LG+++ +
Sbjct: 405 LDGLCCNGKV----EKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLF 460
Query: 247 TAGIQPNVQTFNILLDSYGK 266
+ G++PNV T+ ++ + +
Sbjct: 461 SKGMKPNVITYTTMISGFCR 480
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 63 VFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
+F+ L+E+ + PN Y L+ + + +A ++ M+D G D ++ +L
Sbjct: 286 LFDKLKER--FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 343
Query: 123 SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
RS A L MKS C P+V++Y+I+I+ + + + DM G++P+
Sbjct: 344 LRSMKKSDAIKLFHVMKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 402
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY 242
Y LI +G K+ + L EM ++ PD T N+ ++ N + R Y
Sbjct: 403 AAVYTCLITGFGTQKKLDTVYELLKEM-QEKGHPPDGKTYNALIKLMANQKMPEHGTRIY 461
Query: 243 DKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKA 302
+K I+P++ TFN+++ SY +Y+ AV + M K +Y ++I
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISE 521
Query: 303 G 303
G
Sbjct: 522 G 522
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 91 KQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQT 150
K+ +KA+ +F+ M + E+ LL + R+ L + A L +++K P++ T
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMT 300
Query: 151 YSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEML 210
Y++L+ V + + +DM HG+KP+ V +N +++ ++ + S+ M
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 360
Query: 211 ADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDY 270
+ C P+V + +R F ++T +D +G+QP+ + L+ +G
Sbjct: 361 SKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 419
Query: 271 KKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ +++ MQ+ + TYN +I
Sbjct: 420 DTVYELLKEMQEKGHPPDGKTYNALI 445
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 10/226 (4%)
Query: 44 VLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQP--EKALELFQ 101
+LE L + +++ A+K+F +++ + P V I++ CKQ E A+E F
Sbjct: 339 MLEGL---LRSMKKSDAIKLFHVMKSK---GPCPNVRSYTIMIRDFCKQSSMETAIEYFD 392
Query: 102 AMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV 161
MVD G D YT L++ + L+ + LL+EM+ G PD +TY+ LIK
Sbjct: 393 DMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK-GHPPDGKTYNALIKLMANQ 451
Query: 162 FAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWT 221
+ + + M + I+P+ T+N ++ +Y A+ + + EM+ C PD +
Sbjct: 452 KMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC-PDDNS 510
Query: 222 MNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKG 267
+R + G+ R ++ G++ + +N + +G
Sbjct: 511 YTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRG 556
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 63 VFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
+F+ L+E+ + PN Y L+ + + +A ++ M+D G D ++ +L
Sbjct: 285 LFDKLKER--FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGL 342
Query: 123 SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
RS A L MKS C P+V++Y+I+I+ + + + DM G++P+
Sbjct: 343 LRSMKKSDAIKLFHVMKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPD 401
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY 242
Y LI +G K+ + L EM ++ PD T N+ ++ N + R Y
Sbjct: 402 AAVYTCLITGFGTQKKLDTVYELLKEM-QEKGHPPDGKTYNALIKLMANQKMPEHGTRIY 460
Query: 243 DKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKA 302
+K I+P++ TFN+++ SY +Y+ AV + M K +Y ++I
Sbjct: 461 NKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISE 520
Query: 303 G 303
G
Sbjct: 521 G 521
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 3/206 (1%)
Query: 91 KQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQT 150
K+ +KA+ +F+ M + E+ LL + R+ L + A L +++K P++ T
Sbjct: 242 KERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMT 299
Query: 151 YSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEML 210
Y++L+ V + + +DM HG+KP+ V +N +++ ++ + S+ M
Sbjct: 300 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMK 359
Query: 211 ADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDY 270
+ C P+V + +R F ++T +D +G+QP+ + L+ +G
Sbjct: 360 SKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKL 418
Query: 271 KKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ +++ MQ+ + TYN +I
Sbjct: 419 DTVYELLKEMQEKGHPPDGKTYNALI 444
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 104/226 (46%), Gaps = 10/226 (4%)
Query: 44 VLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQP--EKALELFQ 101
+LE L + +++ A+K+F +++ + P V I++ CKQ E A+E F
Sbjct: 338 MLEGL---LRSMKKSDAIKLFHVMKSK---GPCPNVRSYTIMIRDFCKQSSMETAIEYFD 391
Query: 102 AMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV 161
MVD G D YT L++ + L+ + LL+EM+ G PD +TY+ LIK
Sbjct: 392 DMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK-GHPPDGKTYNALIKLMANQ 450
Query: 162 FAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWT 221
+ + + M + I+P+ T+N ++ +Y A+ + + EM+ C PD +
Sbjct: 451 KMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGIC-PDDNS 509
Query: 222 MNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKG 267
+R + G+ R ++ G++ + +N + +G
Sbjct: 510 YTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRG 555
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Query: 106 EGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFD 165
+G D +Y +++S +++ E S+LEEM T G ++T++I +K+
Sbjct: 188 QGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLT-METFTIAMKAFAAAKERK 245
Query: 166 KVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNST 225
K G+ M + K T N L+D+ G+AK E + L + L +R P++ T
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ-VLFDKLKER-FTPNMMTYTVL 303
Query: 226 LRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHY 285
L + + + R ++ G++P++ N++L+ + + M+
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 363
Query: 286 SWTIVTYNIVIDAFGKAGDLQQ-MEYL 311
+ +Y I+I F K ++ +EY
Sbjct: 364 CPNVRSYTIMIRDFCKQSSMETAIEYF 390
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 2/234 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L P + L+ + + E A + + + + G DC+ YT L+S+ ++SG ++
Sbjct: 460 KLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVD 519
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
F + +M S G + ++ T+ LI C K G + +KP+ V +N L
Sbjct: 520 AMFEVFHQM-SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNAL 578
Query: 190 IDAYGKAKRFSEMESTLVEMLAD-RDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA 248
I A G++ L EM A+ PD ++ + ++A N GQ++ + Y
Sbjct: 579 ISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKY 638
Query: 249 GIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKA 302
GI+ + + I ++S K D+ ++ + M++ + V ++ +ID G A
Sbjct: 639 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA 692
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 11/246 (4%)
Query: 32 GPINSKKLLP-RTVLEALHERVTALRWESAL-KVFELLRE-QLWYRPNSGVYIKLIVMLG 88
G + SK + P R V AL ++A A+ + F++L E + P +I + ++
Sbjct: 561 GILRSKNVKPDRVVFNAL---ISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMK 617
Query: 89 KC---KQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQ 145
C Q E+A E++Q + G E YT +++ S+SG + A S+ ++MK
Sbjct: 618 ACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK-DVT 676
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMEST 205
PD +S LI D+ G+L D GI+ T++Y++L+ A AK + +
Sbjct: 677 PDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALE- 735
Query: 206 LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYG 265
L E + +P + TMN+ + A Q+ D+ +T G++PN T+++L+ +
Sbjct: 736 LYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASE 795
Query: 266 KGHDYK 271
+ D++
Sbjct: 796 RKDDFE 801
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 115/258 (44%), Gaps = 8/258 (3%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE--SYTA 117
A + +LR + +P+ V+ LI G+ ++A ++ M E +D + S A
Sbjct: 556 AFGAYGILRSK-NVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGA 614
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+ A +G +ERA + + M G + + Y+I + SC + +D + DM
Sbjct: 615 LMKACCNAGQVERAKEVYQ-MIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK 673
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
+ P+ V ++ LID G AK E L + + + + + +S + A N
Sbjct: 674 DVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKS-QGIRLGTISYSSLMGACCNAKDWKK 732
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
Y+K ++ ++P + T N L+ + +G+ K ++ ++ +TY++++
Sbjct: 733 ALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLML 792
Query: 298 AFGKAGDLQQMEYLFRLM 315
A + D E F+L+
Sbjct: 793 ASERKDDF---EVSFKLL 807
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 130/306 (42%), Gaps = 26/306 (8%)
Query: 36 SKKLLPRTVLEALHERVTALRWESALKVFE-----LLREQLWYR---------------- 74
K LP ++ H V R + ++K F ++ E L++R
Sbjct: 123 GKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMN 182
Query: 75 --PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
PN + +I L K + ++A+E+F+ M + C+ D +Y L+ + ++ A
Sbjct: 183 ISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAV 242
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
LL+EM+S GC P Y++LI + +V L+ +M + G PN VTYNTLI
Sbjct: 243 LLLDEMQSE-GCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHG 301
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
+ + S L M++ + C P+ T + + + R + G
Sbjct: 302 LCLKGKLDKAVSLLERMVSSK-CIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQM-EYL 311
N +++L+ K ++ ++ M + IV Y++++D + G + E L
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 312 FRLMRS 317
R++ S
Sbjct: 421 NRMIAS 426
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 8/274 (2%)
Query: 36 SKKLLPRTVLEA--LHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQP 93
S K +P V ++ V R A+++ + E+ Y N +Y LI L K +
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEER-GYHLNQHIYSVLISGLFKEGKA 378
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
E+A+ L++ M ++GC + Y+ L+ R G A +L M ++ GC P+ TYS
Sbjct: 379 EEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GCLPNAYTYSS 437
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
L+K + ++ + +M G N Y+ LID R E +ML
Sbjct: 438 LMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLT-I 496
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKF---QTAGIQPNVQTFNILLDSYGKGHDY 270
+PD +S ++ +G +D + Y + + QP+V T+NILLD D
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDI 556
Query: 271 KKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
+ ++ M ++T N ++ + +
Sbjct: 557 SRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSN 590
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 105/244 (43%), Gaps = 5/244 (2%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y LI L K ++ A+ L +M + G ++ Y+ L+S + G E A SL
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+M + GC+P++ YS+L+ ++ + +L+ M G PN TY++L+ +
Sbjct: 385 WRKM-AEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFF 443
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
K E EM C + + + + +G++ + K T GI+P+
Sbjct: 444 KTGLCEEAVQVWKEM-DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 255 QTFNIL---LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
++ + L G K+ M ++ +VTYNI++D D+ + L
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDL 562
Query: 312 FRLM 315
M
Sbjct: 563 LNSM 566
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 106/275 (38%), Gaps = 40/275 (14%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDE-GCVVDCESYTALLSAYSRSGLLERAFSLLE-- 136
+I + GK P+KA++LF MVDE C +S+ ++L+ GL R +
Sbjct: 115 FIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYV 174
Query: 137 -----EMKSTPG-------------------------------CQPDVQTYSILIKSCLE 160
M +P C PD TY L+ +
Sbjct: 175 VNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCK 234
Query: 161 VFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVW 220
D+ LL +M G P+ V YN LID K + + + LV+ + + C P+
Sbjct: 235 EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV-TKLVDNMFLKGCVPNEV 293
Query: 221 TMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYM 280
T N+ + G++D ++ ++ PN T+ L++ K ++ M
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSM 353
Query: 281 QKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
++ Y Y+++I K G ++ L+R M
Sbjct: 354 EERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKM 388
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 98/241 (40%), Gaps = 2/241 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y LI L + +KA+ L + MV C+ + +Y L++ + A L
Sbjct: 290 PNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRL 349
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L M+ G + YS+LI + ++ L MA G KPN V Y+ L+D
Sbjct: 350 LSSMEER-GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+ + +E + L M+A C P+ +T +S ++ F G + + + + G N
Sbjct: 409 REGKPNEAKEILNRMIAS-GCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNK 467
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
+++L+D K+ V M V Y+ +I G + L+
Sbjct: 468 FCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHE 527
Query: 315 M 315
M
Sbjct: 528 M 528
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 128/267 (47%), Gaps = 11/267 (4%)
Query: 47 ALHERVTALRWESALK---VFELLREQLWYRPN---SGVYIKLIVMLGKCKQPEKALELF 100
A++ER T R +A K V E+L EQ Y PN G ++I + G+ E A ++F
Sbjct: 72 AVYER-TVRRLAAAKKFEWVEEILEEQNKY-PNMSKEGFVARIINLYGRVGMFENAQKVF 129
Query: 101 QAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLE 160
M + C S+ ALL+A S + + +E+ +PDV +Y+ LIK
Sbjct: 130 DEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCG 189
Query: 161 VFAFDKVQGLLSDMAIHGIKPNTVTYNTLI-DAYGKAKRFSEMESTLVEMLADRDCQPDV 219
+F + L+ ++ G+KP+ +T+N L+ ++Y K K F E E M+ +++ + D+
Sbjct: 190 KGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGK-FEEGEQIWARMV-EKNVKRDI 247
Query: 220 WTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEY 279
+ N+ L + + M +DK + ++P+V TF ++ + + +
Sbjct: 248 RSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKE 307
Query: 280 MQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
++K +N ++ A KAGDL+
Sbjct: 308 IEKNGCRPLKFVFNSLLPAICKAGDLE 334
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 109/243 (44%), Gaps = 15/243 (6%)
Query: 72 WYRPNSGVYIKLIVMLGKCKQPEKALELFQA------MVDEGCVVDCESYTALLSAYSRS 125
W+R N VY + + L K+ E E+ + M EG V +++ Y R
Sbjct: 66 WFRKNIAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFV------ARIINLYGRV 119
Query: 126 GLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH-GIKPNTV 184
G+ E A + +EM C+ +++ L+ +C+ FD V+G+ ++ I+P+
Sbjct: 120 GMFENAQKVFDEMPER-NCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVA 178
Query: 185 TYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDK 244
+YNTLI F+E L++ + ++ +PD T N L G+ + E+ + +
Sbjct: 179 SYNTLIKGLCGKGSFTEA-VALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWAR 237
Query: 245 FQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
++ +++++N L + ++M ++ + ++ + T+ +I F G
Sbjct: 238 MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGK 297
Query: 305 LQQ 307
L +
Sbjct: 298 LDE 300
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 164 FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMN 223
F+ Q + +M K +++N L++A +K+F +E E+ +PDV + N
Sbjct: 122 FENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYN 181
Query: 224 STLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL-DSYGKGHDYKKMSAVMEYMQK 282
+ ++ G D+ + G++P+ TFNILL +SY KG +++ + M +
Sbjct: 182 TLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGK-FEEGEQIWARMVE 240
Query: 283 YHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+ I +YN + ++M LF
Sbjct: 241 KNVKRDIRSYNARLLGLAMENKSEEMVSLF 270
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 117/261 (44%), Gaps = 3/261 (1%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
++ ALK+F ++ E P+ Y L+ L K + + A + M G V +YT
Sbjct: 389 FKEALKMFYMM-EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYT 447
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
++ ++G L+ A LL EM S G PD+ TYS LI +V F + ++ +
Sbjct: 448 GMIDGLCKNGFLDEAVVLLNEM-SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
G+ PN + Y+TLI + E M+ + + D +T N + + G++
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR-DHFTFNVLVTSLCKAGKVA 565
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
E + GI PN +F+ L++ YG + K +V + M K + T TY ++
Sbjct: 566 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 625
Query: 297 DAFGKAGDLQQMEYLFRLMRS 317
K G L++ E + + +
Sbjct: 626 KGLCKGGHLREAEKFLKSLHA 646
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 107/243 (44%), Gaps = 2/243 (0%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
N VY LI + + + +LE+F+ M G + A+L + +SG +S L
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFL 221
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+EM C PDV T++ILI +F+K L+ M G P VTYNT++ Y K
Sbjct: 222 KEMLKRKIC-PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
RF + L++ + + DV T N + +I + I PN
Sbjct: 281 KGRF-KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
T+N L++ + S ++ M + S VT+N +ID G+ ++ +F +M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 316 RSE 318
++
Sbjct: 400 EAK 402
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 101/237 (42%), Gaps = 3/237 (1%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
L+ L K + +A E + M +G + + S+ L++ Y SG +AFS+ +EM
Sbjct: 554 LVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKV- 612
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G P TY L+K + + + L + +TV YNTL+ A K+ ++
Sbjct: 613 GHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKA 672
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG-IQPNVQTFNILL 261
S EM+ R PD +T S + G+ + + G + PN + +
Sbjct: 673 VSLFGEMV-QRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV 731
Query: 262 DSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
D K +K E M ++ IVT N +ID + + G +++ L M ++
Sbjct: 732 DGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 114/271 (42%), Gaps = 3/271 (1%)
Query: 48 LHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEG 107
+H+ + R + +R+++ + PN Y LI + A +L M+ G
Sbjct: 310 IHDLCRSNRIAKGYLLLRDMRKRMIH-PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFG 368
Query: 108 CVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKV 167
+ ++ AL+ + G + A + M++ G P +Y +L+ + FD
Sbjct: 369 LSPNHVTFNALIDGHISEGNFKEALKMFYMMEA-KGLTPSEVSYGVLLDGLCKNAEFDLA 427
Query: 168 QGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLR 227
+G M +G+ +TY +ID K E L EM D PD+ T ++ +
Sbjct: 428 RGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD-GIDPDIVTYSALIN 486
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW 287
F +G+ T + + G+ PN ++ L+ + + K+ + E M ++
Sbjct: 487 GFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTR 546
Query: 288 TIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
T+N+++ + KAG + + E R M S+
Sbjct: 547 DHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 89/213 (41%), Gaps = 5/213 (2%)
Query: 60 ALKVFELLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
LK F + E ++ + P Y L+ L K +A + +++ VD Y
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS-CLEVFAFDKVQGLLSDMAI 176
LL+A +SG L +A SL EM PD TY+ LI C + + A
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRS-ILPDSYTYTSLISGLCRKGKTVIAILFAKEAEAR 717
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
+ PN V Y +D KA ++ + E + + PD+ T N+ + + +G+I+
Sbjct: 718 GNVLPNKVMYTCFVDGMFKAGQW-KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHD 269
+ PN+ T+NILL Y K D
Sbjct: 777 KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 1/173 (0%)
Query: 144 CQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEME 203
C + Y ILI+ L + M ++G P+ T N ++ + K+ +
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 204 STLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS 263
S L EML + C PDV T N + G + K + +G P + T+N +L
Sbjct: 219 SFLKEMLKRKIC-PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 277
Query: 264 YGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
Y K +K ++++M+ + TYN++I ++ + + L R MR
Sbjct: 278 YCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMR 330
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 2/196 (1%)
Query: 108 CVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKV 167
C + Y L+ Y R G+++ + + M G P V T + ++ S ++ V
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLM-GLYGFNPSVYTCNAILGSVVKSGEDVSV 217
Query: 168 QGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLR 227
L +M I P+ T+N LI+ F E S L++ + P + T N+ L
Sbjct: 218 WSFLKEMLKRKICPDVATFNILINVLCAEGSF-EKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW 287
+ G+ D ++ G+ +V T+N+L+ + + K ++ M+K
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 288 TIVTYNIVIDAFGKAG 303
VTYN +I+ F G
Sbjct: 337 NEVTYNTLINGFSNEG 352
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 101/232 (43%), Gaps = 2/232 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN +Y + + K Q + + + M + G D + A++ YSR G +E+ L
Sbjct: 722 PNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 781
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L EM + G P++ TY+IL+ + L + ++GI P+ +T ++L+
Sbjct: 782 LPEMGNQNG-GPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGIC 840
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
++ E+ +++ R + D +T N + G+I+ + GI +
Sbjct: 841 ESNML-EIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDK 899
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
T + ++ + H +++ V+ M K S Y +I+ + GD++
Sbjct: 900 DTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 133/293 (45%), Gaps = 17/293 (5%)
Query: 20 ATKAIIDKRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLRE--QLWYRPNS 77
A +I++ RK+ P +L+ + L +R + + K E+L E + + P+
Sbjct: 165 AVWGLIEEMRKENP----QLIEPELFVVLVQRFASA--DMVKKAIEVLDEMPKFGFEPDE 218
Query: 78 GVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEE 137
V+ L+ L K + A +LF+ M V+ +T+LL + R G + A +L +
Sbjct: 219 YVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQ 277
Query: 138 MKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAK 197
M G +PD+ Y+ L+ LL DM G +PN Y LI A K
Sbjct: 278 MNEA-GFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 198 RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY---DKFQTAGIQPNV 254
R E VEM +C+ DV T + + F G+ID +CY D G+ P+
Sbjct: 337 RMEEAMKVFVEM-ERYECEADVVTYTALVSGFCKWGKID---KCYIVLDDMIKKGLMPSE 392
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
T+ ++ ++ K +++ +ME M++ Y I YN+VI K G++++
Sbjct: 393 LTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKE 445
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 88/191 (46%), Gaps = 2/191 (1%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ P+ Y L+ + A +L + M G + YT L+ A + +E A
Sbjct: 283 FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 342
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
+ EM+ C+ DV TY+ L+ + DK +L DM G+ P+ +TY ++ A
Sbjct: 343 KVFVEMERYE-CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA 401
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
+ K + F E L+E + + PD+ N +R LG++ R +++ + G+ P
Sbjct: 402 HEKKESFEEC-LELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSP 460
Query: 253 NVQTFNILLDS 263
V TF I+++
Sbjct: 461 GVDTFVIMING 471
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 108/207 (52%), Gaps = 4/207 (1%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
++ L ++E ++ L +PN +Y +LI +G+ K+P +A +++ ++ G + +Y
Sbjct: 296 YDGCLNIYEEMK-ALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA- 175
AL+ AY R+ + A ++ EMK G V Y+ L+ C + D+ + DM
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEK-GLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKN 413
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
P++ T+++LI Y + R SE E+ L++M + +P ++ + S ++ +G Q+
Sbjct: 414 CETCDPDSWTFSSLITVYACSGRVSEAEAALLQM-REAGFEPTLFVLTSVIQCYGKAKQV 472
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLD 262
D + R +D+ GI P+ + LL+
Sbjct: 473 DDVVRTFDQVLELGITPDDRFCGCLLN 499
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 122/263 (46%), Gaps = 10/263 (3%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E + K+F+ + E+ +P++ + +I + P++A+E F+ M GC D + A
Sbjct: 192 EKSEKLFDEMLER-GIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAA 250
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
++ AY R+G ++ A SL + + T + D T+S LI+ +D + +M
Sbjct: 251 MIDAYGRAGNVDMALSLYDRAR-TEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKAL 309
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G+KPN V YN LID+ G+AKR + + +++ + P+ T + +RA+G D
Sbjct: 310 GVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITN-GFTPNWSTYAALVRAYGRARYGDD 368
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHY----SWTIVTYN 293
Y + + G+ V +N LL + + + M+ SW T++
Sbjct: 369 ALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSW---TFS 425
Query: 294 IVIDAFGKAGDLQQMEYLFRLMR 316
+I + +G + + E MR
Sbjct: 426 SLITVYACSGRVSEAEAALLQMR 448
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 11/184 (5%)
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
+LLE MK + +V Y++ +K + +K + L +M GIKP+ T+ T+I
Sbjct: 164 NLLETMKPSR----EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISC 219
Query: 193 Y---GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
G KR E E ++ C+PD TM + + A+G G +D YD+ +T
Sbjct: 220 ARQNGVPKRAVEW----FEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEK 275
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
+ + TF+ L+ YG +Y + E M+ +V YN +ID+ G+A Q +
Sbjct: 276 WRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAK 335
Query: 310 YLFR 313
+++
Sbjct: 336 IIYK 339
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 109/241 (45%), Gaps = 6/241 (2%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVM--LGKCKQPEKALELFQAMVDEGCVVDCESY 115
E+A V L E + +P+ V + + M K K EK+ +LF M++ G D ++
Sbjct: 156 ETAPLVLNNLLETM--KPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATF 213
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
T ++S ++G+ +RA E+M S GC+PD T + +I + D L
Sbjct: 214 TTIISCARQNGVPKRAVEWFEKMSSF-GCEPDNVTMAAMIDAYGRAGNVDMALSLYDRAR 272
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
+ + VT++TLI YG + + + EM A +P++ N + + G +
Sbjct: 273 TEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKA-LGVKPNLVIYNRLIDSMGRAKRP 331
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+ Y T G PN T+ L+ +YG+ A+ M++ S T++ YN +
Sbjct: 332 WQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTL 391
Query: 296 I 296
+
Sbjct: 392 L 392
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 13/250 (5%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PNS + I L K + A ++ ++ ++ + ALLS R+ + R L
Sbjct: 257 PNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 135 LEEMKSTPGCQPDVQTYSILIKS---------CLEVFAFDKVQGLLSDMAIHGIKPNTVT 185
+ +M +PDV T ILI + LEVF +K++G +D + IK +++
Sbjct: 317 VLKMDEVK-IRPDVVTLGILINTLCKSRRVDEALEVF--EKMRGKRTDDG-NVIKADSIH 372
Query: 186 YNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKF 245
+NTLID K R E E LV M + C P+ T N + + G+++T + +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 246 QTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
+ I+PNV T N ++ + H M+K +VTY +I A ++
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 306 QQMEYLFRLM 315
++ Y + M
Sbjct: 493 EKAMYWYEKM 502
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 129/303 (42%), Gaps = 47/303 (15%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIK--------LIVMLGKCKQPEKALELFQAM-VDE 106
R + AL+VFE +R + R + G IK LI L K + ++A EL M ++E
Sbjct: 344 RVDEALEVFEKMRGK---RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 107 GCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDK 166
C + +Y L+ Y R+G LE A ++ MK +P+V T + ++ +
Sbjct: 401 RCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE-IKPNVVTVNTIVGGMCRHHGLNM 459
Query: 167 VQGLLSDMAIHGIKPNTVTYNTLIDA-------------YGK---------AKRFSEMES 204
DM G+K N VTY TLI A Y K AK + + S
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 205 TLVEMLADRDC------------QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
L ++ D D D+ N + F + + + + G +P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKP 579
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+ T+N L+ +GK D++ + +ME M++ T+ TY VIDA+ G+L + LF
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 313 RLM 315
+ M
Sbjct: 640 KDM 642
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 7/229 (3%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R A++V E L+E + + Y LI + EK E+ M EG D +Y
Sbjct: 526 RDHDAIRVVEKLKEG-GFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITY 584
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
L+S + + E ++E+M+ G P V TY +I + V D+ L DM
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 176 IHG-IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
+H + PNTV YN LI+A+ K F + S L E + + +P+V T N+ + Q
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALS-LKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKY 283
+T+ + D+ +PN T IL++ + K+ ++MQ Y
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLR---KFMQGY 748
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 124/282 (43%), Gaps = 38/282 (13%)
Query: 63 VFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
VF + E+ + N Y+ LI EKA+ ++ M++ GC D + Y AL+S
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 123 SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
+ A ++E++K G D+ Y++LI + +KV +L+DM G KP+
Sbjct: 522 CQVRRDHDAIRVVEKLKEG-GFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPD 580
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY 242
++TYNTLI +GK K F +E + +M D P V T + + A+ ++G++D + +
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 243 --------------------DKFQTAG----------------IQPNVQTFNILLDSYGK 266
+ F G ++PNV+T+N L +
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE 699
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQM 308
+ + +M+ M + +T I+++ + +L ++
Sbjct: 700 KTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKL 741
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 3/201 (1%)
Query: 62 KVFELLR--EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
KV+E+L E+ +P+S Y LI GK K E + + M ++G +Y A++
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
AY G L+ A L ++M P+ Y+ILI + ++ F + L +M + +
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
+PN TYN L + K E L++ + ++ C+P+ TM + ++ +
Sbjct: 684 RPNVETYNALFKCLNE-KTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLR 742
Query: 240 RCYDKFQTAGIQPNVQTFNIL 260
+ + A F++
Sbjct: 743 KFMQGYSVASPTEKASPFDVF 763
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 130/303 (42%), Gaps = 47/303 (15%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIK--------LIVMLGKCKQPEKALELFQAM-VDE 106
R + AL+VFE +R + R + G IK LI L K + ++A EL M ++E
Sbjct: 344 RVDEALEVFEQMRGK---RTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEE 400
Query: 107 GCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDK 166
CV + +Y L+ Y R+G LE A ++ MK +P+V T + ++ +
Sbjct: 401 RCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDE-IKPNVVTVNTIVGGMCRHHGLNM 459
Query: 167 VQGLLSDMAIHGIKPNTVTYNTLIDA-------------YGK---------AKRFSEMES 204
DM G+K N VTY TLI A Y K AK + + S
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 205 TLVEMLADRDC------------QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
L ++ D D D+ N + F + + + + G +P
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+ T+N L+ +GK D++ + +ME M++ T+ TY VIDA+ G+L + LF
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 313 RLM 315
+ M
Sbjct: 640 KDM 642
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 104/229 (45%), Gaps = 7/229 (3%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R A++V E L+E + + Y LI + EK E+ M EG D +Y
Sbjct: 526 RDHDAIRVVEKLKEG-GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
L+S + + E ++E+M+ G P V TY +I + V D+ L DM
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 176 IHG-IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
+H + PNTV YN LI+A+ K F + S L E + + +P+V T N+ + Q
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALS-LKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKY 283
+T+ + D+ +PN T IL++ + K+ ++MQ Y
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLR---KFMQGY 748
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 111/250 (44%), Gaps = 13/250 (5%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PNS + I L K + A ++ ++ ++ + ALLS R+ + R L
Sbjct: 257 PNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDL 316
Query: 135 LEEMKSTPGCQPDVQTYSILIKS---------CLEVFAFDKVQGLLSDMAIHGIKPNTVT 185
+ +M +PDV T ILI + LEVF ++++G +D + IK +++
Sbjct: 317 VLKMDEVK-IRPDVVTLGILINTLCKSRRVDEALEVF--EQMRGKRTDDG-NVIKADSIH 372
Query: 186 YNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKF 245
+NTLID K R E E LV M + C P+ T N + + G+++T + +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 246 QTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
+ I+PNV T N ++ + H M+K +VTY +I A ++
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 306 QQMEYLFRLM 315
++ Y + M
Sbjct: 493 EKAMYWYEKM 502
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 124/282 (43%), Gaps = 38/282 (13%)
Query: 63 VFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
VF + E+ + N Y+ LI EKA+ ++ M++ GC D + Y AL+S
Sbjct: 462 VFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGL 521
Query: 123 SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
+ A ++E++K G D+ Y++LI + +KV +L+DM G KP+
Sbjct: 522 CQVRRDHDAIRVVEKLKEG-GFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPD 580
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY 242
++TYNTLI +GK K F +E + +M D P V T + + A+ ++G++D + +
Sbjct: 581 SITYNTLISFFGKHKDFESVERMMEQMRED-GLDPTVTTYGAVIDAYCSVGELDEALKLF 639
Query: 243 --------------------DKFQTAG----------------IQPNVQTFNILLDSYGK 266
+ F G ++PNV+T+N L +
Sbjct: 640 KDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNE 699
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQM 308
+ + +M+ M + +T I+++ + +L ++
Sbjct: 700 KTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKL 741
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 3/204 (1%)
Query: 59 SALKVFELLR--EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
+A KV+E+L E+ +P+S Y LI GK K E + + M ++G +Y
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYG 620
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
A++ AY G L+ A L ++M P+ Y+ILI + ++ F + L +M +
Sbjct: 621 AVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
++PN TYN L + K E L++ + ++ C+P+ TM + ++
Sbjct: 681 KMVRPNVETYNALFKCLNE-KTQGETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELV 739
Query: 237 TMERCYDKFQTAGIQPNVQTFNIL 260
+ + + A F++
Sbjct: 740 KLRKFMQGYSVASPTEKASPFDVF 763
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 7/268 (2%)
Query: 53 TALRWESALKVFELLREQLWYR--PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVV 110
A RW+ K LLR+ + + PN + LI K + +A +L + M+ G
Sbjct: 310 NAGRWDDGAK---LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
+ +Y +L+ + + LE A +++ M S GC PD+ T++ILI + D L
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMIS-KGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
+M++ G+ NTVTYNTL+ + ++ + E+ L + + R +PD+ + L
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKL-EVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
+ G+++ + K + + ++ ++ + I++ + +
Sbjct: 485 DNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR 544
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
YNI+I + L + + LFR M E
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEE 572
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 118/254 (46%), Gaps = 12/254 (4%)
Query: 70 QLWYRPNSGVYIKLIVMLG-KCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL 128
+L Y P++ ++ L+ L +C+ E ALEL MV+ G + L++ +G +
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSE-ALELVDRMVEMGHKPTLITLNTLVNGLCLNGKV 209
Query: 129 ERAFSLLEEMKSTPGCQPDVQTY----SILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTV 184
A L++ M T G QP+ TY +++ KS A + LL M IK + V
Sbjct: 210 SDAVVLIDRMVET-GFQPNEVTYGPVLNVMCKSGQTALAME----LLRKMEERNIKLDAV 264
Query: 185 TYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDK 244
Y+ +ID K + EM + + D+ T N+ + F N G+ D +
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 245 FQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
I PNV TF++L+DS+ K ++ +++ M + + +TYN +ID F K
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 305 LQQMEYLFRLMRSE 318
L++ + LM S+
Sbjct: 384 LEEAIQMVDLMISK 397
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 102/250 (40%), Gaps = 42/250 (16%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R E A+++ +L+ + P+ + LI K + + LELF+ M G + + +Y
Sbjct: 383 RLEEAIQMVDLMISK-GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI---------KSCLEVFA--- 163
L+ + +SG LE A L +EM S +PD+ +Y IL+ + LE+F
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRR-VRPDIVSYKILLDGLCDNGELEKALEIFGKIE 500
Query: 164 -----------------------FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS 200
D L + + G+K + YN +I + S
Sbjct: 501 KSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLS 560
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID--TMERCYDKFQTAGIQPNVQTFN 258
+ + L + + PD T N +RA +LG D T ++ +++G +V T
Sbjct: 561 KAD-ILFRKMTEEGHAPDELTYNILIRA--HLGDDDATTAAELIEEMKSSGFPADVSTVK 617
Query: 259 ILLDSYGKGH 268
++++ G
Sbjct: 618 MVINMLSSGE 627
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/253 (26%), Positives = 118/253 (46%), Gaps = 3/253 (1%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
AL+V + ++++ PN Y LI L K + A M + + +++AL+
Sbjct: 67 ALEVLKRMKDR-GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
AY++ G L + S+ + M P+V TYS LI D+ +L M G
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQM-SIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 184
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
PN VTY+TL + + K+ R + L +M R + + N+ ++ + G+ID
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDM-PQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 240 RCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
+ + G+ PN++++NI+L + +K + E+MQK I+TY I+I
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGM 303
Query: 300 GKAGDLQQMEYLF 312
KA +++ LF
Sbjct: 304 CKACMVKEAYDLF 316
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 2/203 (0%)
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
T L+ ++ L+ A +L+ MK G P+V TYS LI + + L +M
Sbjct: 52 TILIDTLCKNRLVVPALEVLKRMKDR-GISPNVVTYSSLITGLCKSGRLADAERRLHEMD 110
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
I PN +T++ LIDAY K + S+++S + +M+ P+V+T +S + ++
Sbjct: 111 SKKINPNVITFSALIDAYAKRGKLSKVDS-VYKMMIQMSIDPNVFTYSSLIYGLCMHNRV 169
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
D + D + G PNV T++ L + + K +++ M + + V+ N +
Sbjct: 170 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 229
Query: 296 IDAFGKAGDLQQMEYLFRLMRSE 318
I + +AG + +F M S
Sbjct: 230 IKGYFQAGKIDLALGVFGYMTSN 252
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 3/155 (1%)
Query: 143 GCQPDVQTYSILIKS-CLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
G +PD+ T S L+ CL D V + M GIK + V LID K R
Sbjct: 8 GIEPDIVTASSLVNGFCLSNSIKDAVY-VAGQMEKMGIKRDVVVDTILIDTLCK-NRLVV 65
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
+++ + DR P+V T +S + G++ ER + + I PNV TF+ L+
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 262 DSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
D+Y K K+ +V + M + + TY+ +I
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLI 160
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 122/250 (48%), Gaps = 8/250 (3%)
Query: 69 EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL 128
E+ RP+ Y LI L K + + A LF M G + + +T L+ +SR+G +
Sbjct: 302 EKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEI 361
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
+ ++M S G QPD+ Y+ L+ + + ++ M G++P+ +TY T
Sbjct: 362 DLMKESYQKMLSK-GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 189 LIDAYGKAKRFSEMESTLVEMLADRD---CQPDVWTMNSTLRAFGNLGQIDTMERCYDKF 245
LID + + ++E+ L E+ + D + D ++ + G++ ER +
Sbjct: 421 LIDGFCRG---GDVETAL-EIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 246 QTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
AGI+P+ T+ +++D++ K D + +++ MQ + ++VTYN++++ K G +
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 306 QQMEYLFRLM 315
+ + L M
Sbjct: 537 KNADMLLDAM 546
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 117/277 (42%), Gaps = 39/277 (14%)
Query: 79 VYIKLIVMLGKCKQPE--KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLE 136
VY+ I+M CK+ A ++F + S+ L++ Y + G L+ F L
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 137 EMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKA 196
+M+ + +PDV TYS LI + + D GL +M G+ PN V + TLI + +
Sbjct: 300 QMEKSR-TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRN 358
Query: 197 KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQT 256
M+ + +ML+ + QPD+ N+ + F G + D G++P+ T
Sbjct: 359 GEIDLMKESYQKMLS-KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 257 FNILLDSYGKGHDY-------KKMSAVMEYMQKYHYSWTI-------------------- 289
+ L+D + +G D K+M + + +S +
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 290 --------VTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
VTY +++DAF K GD Q L + M+S+
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSD 514
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 11/198 (5%)
Query: 88 GKCKQPE--KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQ 145
G CK + A + M+ G D +YT L+ + R G +E A + +EM G +
Sbjct: 389 GFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQN-GIE 447
Query: 146 PDVQTYSILIKS-CLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMES 204
D +S L+ C E D + L +M GIKP+ VTY ++DA+ K
Sbjct: 448 LDRVGFSALVCGMCKEGRVIDAERAL-REMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFK 506
Query: 205 TLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY 264
L EM +D P V T N L LGQ+ + D G+ P+ T+N LL+
Sbjct: 507 LLKEMQSDGHV-PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLE-- 563
Query: 265 GKGHDYKKMSAVMEYMQK 282
GH ++ ++ Y+QK
Sbjct: 564 --GH-HRHANSSKRYIQK 578
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 102/229 (44%), Gaps = 4/229 (1%)
Query: 88 GKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPD 147
G+ +P +L +F M D C ++Y +L+ L AF + M+ G P
Sbjct: 97 GRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREI-GLPPT 155
Query: 148 VQTYSILIKS-CLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
V + ++LIK+ C D + +M G P++ TY TLI + R E +
Sbjct: 156 VASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLF 215
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
EM+ ++DC P V T S + +D R ++ ++ GI+PNV T++ L+D K
Sbjct: 216 TEMV-EKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCK 274
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ-MEYLFRL 314
+ + E M +VTY +I K +Q+ +E L R+
Sbjct: 275 DGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 4/202 (1%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+ L++F M GC D +Y L+S R G ++ A L EM C P V TY+
Sbjct: 174 DAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD-CAPTVVTYTS 232
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR-FSEMESTLVEMLAD 212
LI D+ L +M GI+PN TY++L+D K R ME L EM+
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME--LFEMMMA 290
Query: 213 RDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKK 272
R C+P++ T + + +I D+ G++P+ + ++ + +++
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFRE 350
Query: 273 MSAVMEYMQKYHYSWTIVTYNI 294
+ ++ M + +T+NI
Sbjct: 351 AANFLDEMILGGITPNRLTWNI 372
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 97/220 (44%), Gaps = 12/220 (5%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
+ A++ E ++ + PN Y L+ L K + +A+ELF+ M+ GC + +YT
Sbjct: 244 DEAMRYLEEMKSK-GIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L++ + ++ A LL+ M + G +PD Y +I + F + L +M +
Sbjct: 303 LITGLCKEQKIQEAVELLDRM-NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILG 361
Query: 178 GIKPNTVTYNTLIDAYGKAKR-----FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
GI PN +T+N + + R + TL + R +V T+ S ++
Sbjct: 362 GITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKK 421
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKK 272
G+ + D+ T G P+ T+ +L+ GH K
Sbjct: 422 GEFQKAVQLVDEIVTDGCIPSKGTWKLLI-----GHTLDK 456
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 35/187 (18%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
++ LK+F L + P+S Y LI L + + ++A +LF MV++ C +YT+
Sbjct: 174 DAGLKIF-LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTS 232
Query: 118 LLSAYSRSGLLERAFSLLEEMKS----------------------------------TPG 143
L++ S ++ A LEEMKS G
Sbjct: 233 LINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARG 292
Query: 144 CQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEME 203
C+P++ TY+ LI + + LL M + G+KP+ Y +I + +F E
Sbjct: 293 CRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAA 352
Query: 204 STLVEML 210
+ L EM+
Sbjct: 353 NFLDEMI 359
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/283 (20%), Positives = 111/283 (39%), Gaps = 8/283 (2%)
Query: 36 SKKLLPRTVLEALHERVTALRWESALKVFELLREQL--WYRPNSGVYIKLIVMLGKCKQP 93
SK + P V++ + E ++ VF+ + Y + + +++ L +
Sbjct: 11 SKNITPSQVIKLMRAEKDV---EKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKF 67
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+ A +L M E CVV + ++ Y R + + +MK C P + Y
Sbjct: 68 KAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFD-CDPSQKAYVT 126
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
++ +E + +M G+ P + N LI A + + + + R
Sbjct: 127 VLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKR 186
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
C PD +T + + G+ID ++ + + P V T+ L++ + +
Sbjct: 187 GCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEA 246
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAG-DLQQMEYLFRLM 315
+E M+ + TY+ ++D K G LQ ME LF +M
Sbjct: 247 MRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME-LFEMM 288
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 106/232 (45%), Gaps = 2/232 (0%)
Query: 87 LGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
L K + E+A L + G + D +Y L+ Y+R ++ A+++ M+ G +P
Sbjct: 23 LCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREA-GIEP 81
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
DV TY+ LI + ++V L +M G+ P+ +YNTL+ Y K R E L
Sbjct: 82 DVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKIL 141
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
E + P + T N L A G D + ++ ++P + T+NIL++ K
Sbjct: 142 HEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCK 200
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ +M ++K Y+ VTY ++ + K +++ LF M+ E
Sbjct: 201 SRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 99/232 (42%), Gaps = 24/232 (10%)
Query: 51 RVTALRWESALKVFELLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGC 108
RV ++ W ++RE + Y PN+ Y ++ M K K+ EK L+LF M EG
Sbjct: 203 RVGSVDW--------MMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGY 254
Query: 109 VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQ 168
D + A++SA ++G E A+ + E+ + D+ +Y+ L+ + D V
Sbjct: 255 TFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVD 314
Query: 169 GLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRA 228
LL ++ + G+KP+ T+ +++ E L + + QP V T N +
Sbjct: 315 DLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLA-CIGEMGMQPSVVTCNCLIDG 373
Query: 229 FGNLGQIDTMERCY------DKFQTAGIQPN-------VQTFNILLDSYGKG 267
G +D R + D+F + N V +LL Y KG
Sbjct: 374 LCKAGHVDRAMRLFASMEVRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKG 425
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 110/259 (42%), Gaps = 10/259 (3%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
+ A V +RE P+ Y LI K + L+LF M+ G D SY
Sbjct: 65 DEAYAVTRRMREA-GIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+S Y + G AF +L E G P + TY+IL+ + + D L +
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR 183
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
+KP +TYN LI+ K++R ++ + E L P+ T + L+ + +I+
Sbjct: 184 -VKPELMTYNILINGLCKSRRVGSVDWMMRE-LKKSGYTPNAVTYTTMLKMYFKTKRIEK 241
Query: 238 MERCYDKFQTAGIQ----PNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
+ + K + G N + L+ + G + + E ++ S IV+YN
Sbjct: 242 GLQLFLKMKKEGYTFDGFANCAVVSALIKT---GRAEEAYECMHELVRSGTRSQDIVSYN 298
Query: 294 IVIDAFGKAGDLQQMEYLF 312
+++ + K G+L ++ L
Sbjct: 299 TLLNLYFKDGNLDAVDDLL 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 47/249 (18%)
Query: 107 GCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDK 166
G V ++Y LL A +SG + A L + +KS +P++ TY+ILI +
Sbjct: 149 GLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR--VKPELMTYNILINGLCKSRRVGS 206
Query: 167 VQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR-------FSEME---------------S 204
V ++ ++ G PN VTY T++ Y K KR F +M+ S
Sbjct: 207 VDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVS 266
Query: 205 TLV-------------EMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQ 251
L+ E++ D+ + N+ L + G +D ++ ++ + G++
Sbjct: 267 ALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLK 326
Query: 252 PNVQTFNI----LLDSYGKGHDYKKMSAVMEY-MQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
P+ T I LL+ G K ++ + E MQ ++VT N +ID KAG +
Sbjct: 327 PDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQP-----SVVTCNCLIDGLCKAGHVD 381
Query: 307 QMEYLFRLM 315
+ LF M
Sbjct: 382 RAMRLFASM 390
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 82/175 (46%), Gaps = 4/175 (2%)
Query: 146 PDVQT--YSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEME 203
P + T +I + S + ++ + LL D G+ P+ +TYNTLI Y + E
Sbjct: 9 PGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAY 68
Query: 204 STLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS 263
+ M + +PDV T NS + ++ + + +D+ +G+ P++ ++N L+
Sbjct: 69 AVTRRM-REAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 127
Query: 264 YGK-GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
Y K G + + E + I TYNI++DA K+G LF+ ++S
Sbjct: 128 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS 182
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 111/246 (45%), Gaps = 12/246 (4%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
++A+++F+ L+ ++ +P Y LI L K ++ + + + G + +YT
Sbjct: 171 DNAIELFKHLKSRV--KPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTT 228
Query: 118 LLSAYSRSGLLERAFSLLEEMKS---TPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
+L Y ++ +E+ L +MK T + S LIK+ A++ + L+
Sbjct: 229 MLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRS- 287
Query: 175 AIHGIKP-NTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
G + + V+YNTL++ Y K ++ L+E + + +PD +T + N+G
Sbjct: 288 ---GTRSQDIVSYNTLLNLYFKDGNLDAVDD-LLEEIEMKGLKPDDYTHTIIVNGLLNIG 343
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK-GHDYKKMSAVMEYMQKYHYSWTIVTY 292
E+ G+QP+V T N L+D K GH + M + +++T V +
Sbjct: 344 NTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFTYTSVVH 403
Query: 293 NIVIDA 298
N+ D
Sbjct: 404 NLCKDG 409
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 107/242 (44%), Gaps = 35/242 (14%)
Query: 54 ALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE 113
A + E AL+ F R + ++K+I MLG+ + A + M ++G D +
Sbjct: 127 AKKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDED 186
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKS--------------------------------- 140
+ L+ +Y ++G+++ + + ++MK
Sbjct: 187 MFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKM 246
Query: 141 -TPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
+ G +P TY++++ + DM GI P+ T+NT+I+ + + K+
Sbjct: 247 VSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKM 306
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
E E VEM ++ P V + + ++ + + ++D R +++ +++GI+PN T++
Sbjct: 307 DEAEKLFVEMKGNK-IGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYST 365
Query: 260 LL 261
LL
Sbjct: 366 LL 367
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 91/228 (39%), Gaps = 9/228 (3%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
E AL F+ M G D ++ +++ + R ++ A L EMK P V +Y+
Sbjct: 272 ETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNK-IGPSVVSYTT 330
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
+IK L V D + +M GI+PN TY+TL+ A + E ++ L M+A
Sbjct: 331 MIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKH 390
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
D L + G + T + + +L+++ K Y +
Sbjct: 391 IAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRA 450
Query: 274 SAVM------EYMQKYHYSWTI--VTYNIVIDAFGKAGDLQQMEYLFR 313
++ E + ++ + + YN +I+ G + E LFR
Sbjct: 451 IKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFR 498
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 113/252 (44%), Gaps = 10/252 (3%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
++ R N+ + LI K Q +A ++F M D D +Y L+ Y R+G ++
Sbjct: 359 EIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVD 418
Query: 130 RAFSLLEEMKSTPGCQ----PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVT 185
A L ++M CQ P V TY+IL+K + AF V L M G+ + ++
Sbjct: 419 EALKLCDQM-----CQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEIS 473
Query: 186 YNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKF 245
+TL++A K F+E +LA R D T+N + + +++ + D
Sbjct: 474 CSTLLEALFKLGDFNEAMKLWENVLA-RGLLTDTITLNVMISGLCKMEKVNEAKEILDNV 532
Query: 246 QTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
+P VQT+ L Y K + K+ AV EYM++ TI YN +I K L
Sbjct: 533 NIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHL 592
Query: 306 QQMEYLFRLMRS 317
++ L +R+
Sbjct: 593 NKVADLVIELRA 604
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 1/208 (0%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
AL ++ M+ D + + +++AY RSG +++A +E +S+ G + +V TY+ LI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
+ + + +L M+ G+ N VTY +LI Y K E E E+L ++
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF-ELLKEKKL 327
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
D + + GQI R +D G++ N N L++ Y K +
Sbjct: 328 VADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQ 387
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
+ M + TYN ++D + +AG
Sbjct: 388 IFSRMNDWSLKPDHHTYNTLVDGYCRAG 415
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 11/225 (4%)
Query: 86 MLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERA---FSLLEEMKSTP 142
M+G + + L L M + G + +YT+L+ Y + GL+E A F LL+E K
Sbjct: 273 MIGDVEGMTRVLRL---MSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVA 329
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
D Y +L+ + +M G++ NT N+LI+ Y K+ + E
Sbjct: 330 ----DQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEA 385
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
E M D +PD T N+ + + G +D + D+ + P V T+NILL
Sbjct: 386 EQIFSRM-NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLK 444
Query: 263 SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
Y + + + ++ + M K + ++ + +++A K GD +
Sbjct: 445 GYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNE 489
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 64/166 (38%), Gaps = 36/166 (21%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
Y ++ ++G LE A L ++ S+ PD TY+ILI C +K L +M
Sbjct: 722 YNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEM 781
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
A+ GI PN VTYN LI K LG
Sbjct: 782 ALKGIIPNIVTYNALIKGLCK------------------------------------LGN 805
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYM 280
+D +R K GI PN T+N L+D K + + + E M
Sbjct: 806 VDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 124/269 (46%), Gaps = 30/269 (11%)
Query: 55 LRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCK---QPEKALELFQAMVDEGCVVD 111
L E+ L++F L +Q +RP+ Y K++ +L + + Q + L A+ G VV
Sbjct: 82 LNPEACLEIFNLASKQQKFRPDYKAYCKMVHILSRARNYQQTKSYLCELVALNHSGFVV- 140
Query: 112 CESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
+ L+ + F ++ ++ + G L+K+ L VF
Sbjct: 141 ---WGELVRVFKEFSFSPTVFDMILKVYAEKG----------LVKNALHVF--------- 178
Query: 172 SDMAIHGIKPNTVTYNTLIDA-YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
+M +G P+ ++ N+L+ K + F + + + + + PDV+T + + A+
Sbjct: 179 DNMGNYGRIPSLLSCNSLLSNLVRKGENFVALH--VYDQMISFEVSPDVFTCSIVVNAYC 236
Query: 231 NLGQID-TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI 289
G +D M + + G++ NV T+N L++ Y D + M+ V+ M + S +
Sbjct: 237 RSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNV 296
Query: 290 VTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
VTY +I + K G +++ E++F L++ +
Sbjct: 297 VTYTSLIKGYCKKGLMEEAEHVFELLKEK 325
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 34/298 (11%)
Query: 30 KKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVML-G 88
K+G +N+ ++ T+LEAL + + A+K++E + R I L VM+ G
Sbjct: 464 KRG-VNADEISCSTLLEALFKLGD---FNEAMKLWE----NVLARGLLTDTITLNVMISG 515
Query: 89 KCK--QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
CK + +A E+ + C ++Y AL Y + G L+ AF++ E M+ G P
Sbjct: 516 LCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMER-KGIFP 574
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
++ Y+ LI + +KV L+ ++ G+ P TY LI + + +T
Sbjct: 575 TIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATC 634
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
EM+ ++ +V + + L +ID E C + + F++LL Y
Sbjct: 635 FEMI-EKGITLNVNICSKIANSLFRLDKID--EACL-------LLQKIVDFDLLLPGYQS 684
Query: 267 GHDYKKMSA--------VMEYMQKYHYSWTIV----TYNIVIDAFGKAGDLQQMEYLF 312
++ + SA + E ++ +V YN+ I KAG L+ LF
Sbjct: 685 LKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLF 742
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 55/127 (43%)
Query: 181 PNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMER 240
PN + YN I KA + + ++L+ PD +T + G I+
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 241 CYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 300
D+ GI PN+ T+N L+ K + + ++ + + + +TYN +ID
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 301 KAGDLQQ 307
K+G++ +
Sbjct: 837 KSGNVAE 843
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 3/242 (1%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEG-CVVDCESYTALLSAYSRSGLLERAFSL 134
N VY +I L K Q KA EL M++E V C SY +++ + + G ++ A +
Sbjct: 547 NGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAA 606
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
EEM G P+V TY+ L+ + D+ + +M G+K + Y LID +
Sbjct: 607 YEEMCGN-GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
K E S L L + P NS + F NLG + Y K G++ ++
Sbjct: 666 KRSNM-ESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDL 724
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
T+ L+D K + S + MQ + Y ++++ K G ++ +F
Sbjct: 725 GTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEE 784
Query: 315 MR 316
M+
Sbjct: 785 MK 786
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 115/262 (43%), Gaps = 13/262 (4%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQ--PEKALELFQAMVDEGCVVDCE 113
+ E ALK+F+ + + + V++ ++ CKQ ++A EL M G +
Sbjct: 424 KHEEALKLFD----ESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVV 479
Query: 114 SYTALLSAYSRSGLLERA---FSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
SY ++ + R ++ A FS + E G +P+ TYSILI C +
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILE----KGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
++ M I+ N V Y T+I+ K + S+ L M+ ++ + NS + F
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFF 595
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
G++D+ Y++ GI PNV T+ L++ K + + + + M+ I
Sbjct: 596 KEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIP 655
Query: 291 TYNIVIDAFGKAGDLQQMEYLF 312
Y +ID F K +++ LF
Sbjct: 656 AYGALIDGFCKRSNMESASALF 677
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 88 GKCKQP--EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQ 145
G CK+ E A LF +++EG Y +L+S + G + A L ++M G +
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD-GLR 721
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMEST 205
D+ TY+ LI L+ L ++M G+ P+ + Y +++ K +F ++
Sbjct: 722 CDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKM 781
Query: 206 LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
EM + P+V N+ + G +D R +D+ GI P+ TF+IL+
Sbjct: 782 FEEM-KKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/285 (19%), Positives = 114/285 (40%), Gaps = 34/285 (11%)
Query: 67 LREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSG 126
++E+ P+ Y +I+ K + A+ L M+ +G ++ + T+L++ + ++
Sbjct: 294 MKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNN 353
Query: 127 LLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTY 186
L A L ++M+ G P+ T+S+LI+ + +K M + G+ P+
Sbjct: 354 DLVSALVLFDKMEKE-GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHV 412
Query: 187 NTLIDAYGKAKRFSEM--------------------------------EST-LVEMLADR 213
+T+I + K ++ E E+T L+ + R
Sbjct: 413 HTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESR 472
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
P+V + N+ + +D + G++PN T++IL+D + HD +
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
V+ +M + V Y +I+ K G + L M E
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEE 577
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 6/177 (3%)
Query: 58 ESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
ESA +F ELL E L P+ +Y LI AL+L++ M+ +G D +YT
Sbjct: 671 ESASALFSELLEEGL--NPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYT 728
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
L+ + G L A L EM++ G PD Y++++ + F KV + +M
Sbjct: 729 TLIDGLLKDGNLILASELYTEMQAV-GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKK 787
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRA-FGNL 232
+ + PN + YN +I + + E EML D+ PD T + + GNL
Sbjct: 788 NNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML-DKGILPDGATFDILVSGQVGNL 843
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 1/243 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ NS + L+ K +Q + A+++ M++ + LSA + L A
Sbjct: 159 FEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAK 218
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L M + G D T +L+++ L + +LS G +P+++ Y+ + A
Sbjct: 219 ELYSRMVAI-GVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQA 277
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
K + S L EM + C P T S + A G +D R D+ + GI
Sbjct: 278 CCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISM 337
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
NV L+ + K +D + + M+K S VT++++I+ F K G++++ +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 313 RLM 315
+ M
Sbjct: 398 KKM 400
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 116/235 (49%), Gaps = 2/235 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
++PN +L+ L K + +KA+ + + MV G + D +YT L++ + G + A
Sbjct: 102 HKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAM 161
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L+E+M+ G + TY+ L++ + + ++ + + G+ PN TY+ L++A
Sbjct: 162 QLVEKMEDH-GYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
K + E L E++ + +P++ + N L F G+ D + + G +
Sbjct: 221 AYKERGTDEAVKLLDEIIV-KGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKA 279
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
NV ++NILL +++ ++++ M + ++VTYNI+I++ G +Q
Sbjct: 280 NVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 118/258 (45%), Gaps = 5/258 (1%)
Query: 48 LHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEG 107
L++ A R + A++V EL+ P++ Y L+ L K A++L + M D G
Sbjct: 113 LYDLCKANRLKKAIRVIELMVSS-GIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHG 171
Query: 108 CVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKV 167
+ +Y AL+ G L ++ +E + G P+ TYS L+++ + D+
Sbjct: 172 YPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK-GLAPNAFTYSFLLEAAYKERGTDEA 230
Query: 168 QGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLR 227
LL ++ + G +PN V+YN L+ + K R + + E+ A + + +V + N LR
Sbjct: 231 VKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPA-KGFKANVVSYNILLR 289
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQK--YHY 285
G+ + + P+V T+NIL++S ++ V++ M K + +
Sbjct: 290 CLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQF 349
Query: 286 SWTIVTYNIVIDAFGKAG 303
T +YN VI K G
Sbjct: 350 RVTATSYNPVIARLCKEG 367
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 2/186 (1%)
Query: 128 LERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYN 187
L +FS LE + T G +P+V + L+ + K ++ M GI P+ Y
Sbjct: 87 LSDSFSHLESL-VTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYT 145
Query: 188 TLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQT 247
L++ K LVE + D + T N+ +R LG ++ + ++
Sbjct: 146 YLVNQLCKRGNVG-YAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQ 204
Query: 248 AGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
G+ PN T++ LL++ K + +++ + +V+YN+++ F K G
Sbjct: 205 KGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDD 264
Query: 308 MEYLFR 313
LFR
Sbjct: 265 AMALFR 270
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 2/230 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P ++ +I G+ K P +AL +F M C +S +LLSA + G LE+
Sbjct: 81 PTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKER 140
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L + +PD TY+ILI C + FD L +M +KP VT+ TLI
Sbjct: 141 LSSIDEFG--KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLC 198
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
K R E +ML +P V S ++A +G++ + D+ I+ +
Sbjct: 199 KDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDA 258
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
++ L+ S K ++S ++E M + VTYN++I+ F D
Sbjct: 259 AIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVEND 308
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 119/246 (48%), Gaps = 16/246 (6%)
Query: 64 FELLREQL-----WYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTAL 118
E ++E+L + +P++ Y LI + + AL+LF MV + ++ L
Sbjct: 134 LEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTL 193
Query: 119 LSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV----FAFDKVQGLLSDM 174
+ + ++ A + +M G +P V Y+ LIK+ ++ FAF L D
Sbjct: 194 IHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFK-----LKDE 248
Query: 175 AIHG-IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
A G IK + Y+TLI + KA R +E+ S ++E ++++ C+PD T N + F
Sbjct: 249 AYEGKIKVDAAIYSTLISSLIKAGRSNEV-SMILEEMSEKGCKPDTVTYNVLINGFCVEN 307
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
++ R D+ G++P+V ++N++L + + +++ + + E M + S ++Y
Sbjct: 308 DSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYR 367
Query: 294 IVIDAF 299
IV D
Sbjct: 368 IVFDGL 373
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
Query: 48 LHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEG 107
+H R + ALK+ + + RP +Y LI L + + A +L +
Sbjct: 194 IHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGK 253
Query: 108 CVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS-CLEVFAFDK 166
VD Y+ L+S+ ++G +LEEM S GC+PD TY++LI C+E + +
Sbjct: 254 IKVDAAIYSTLISSLIKAGRSNEVSMILEEM-SEKGCKPDTVTYNVLINGFCVENDS-ES 311
Query: 167 VQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWT 221
+L +M G+KP+ ++YN ++ + + K++ E + L E + R C PD +
Sbjct: 312 ANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEE-ATYLFEDMPRRGCSPDTLS 365
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
++ +Y LI L K + + + + M ++GC D +Y L++ + E A +L
Sbjct: 257 DAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVL 316
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+EM G +PDV +Y++++ + +++ L DM G P+T++Y + D +
Sbjct: 317 DEMVEK-GLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCE 375
Query: 196 AKRFSEMESTLVEML 210
+F E L EML
Sbjct: 376 GLQFEEAAVILDEML 390
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 109/243 (44%), Gaps = 4/243 (1%)
Query: 74 RPNSGVYIKLIV-MLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
RPNS + LI L KC E A ++F M++ +Y +L+ R+ + +A
Sbjct: 183 RPNSVSFNILIKGFLDKCDW-EAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
SLLE+M +P+ T+ +L+K +++ + L+ DM G KP V Y L+
Sbjct: 242 SLLEDMIKKR-IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSD 300
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
GK R E + L EM R +PDV N + ++ R + Q G +P
Sbjct: 301 LGKRGRIDEAKLLLGEM-KKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKP 359
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
N T+ +++D + + D+ V+ M + T T+ ++ K G+L ++
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVL 419
Query: 313 RLM 315
+M
Sbjct: 420 EVM 422
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 105/224 (46%), Gaps = 2/224 (0%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
R +++ LI GK +KA+++F + CV +S L++ +G LE+A S
Sbjct: 113 RCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKS 172
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
+ K +P+ +++ILIK L+ ++ + +M ++P+ VTYN+LI
Sbjct: 173 FFDGAKDMR-LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFL 231
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
+ + +S L +M+ R +P+ T ++ G+ + ++ + G +P
Sbjct: 232 CRNDDMGKAKSLLEDMIKKR-IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 254 VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ + IL+ GK + ++ M+K +V YNI+++
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
E A SL + + G + D +YS LI + FD V +L + ++ +
Sbjct: 63 EEALSLFHQYQEM-GFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 189 LIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA 248
LI YGKA + + DC + ++N+ + + G+++ + +D +
Sbjct: 122 LIQHYGKAGSVDKAIDVF-HKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 249 GIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQM 308
++PN +FNIL+ + D++ V + M + ++VTYN +I + D+ +
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 309 EYLFRLM 315
+ L M
Sbjct: 241 KSLLEDM 247
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 8/259 (3%)
Query: 66 LLREQLWYR------PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
L E LW P+S + ++ L + ++ + +Q M+ G V D Y L
Sbjct: 147 LFEEALWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLF 206
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+ GL + LL+EM S G +P+V Y+I I ++ + + M HG+
Sbjct: 207 QCCFKQGLYSKKEKLLDEMTSL-GIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGV 265
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
PN TY+ +ID Y K + E+L + P+V + + F ++ T
Sbjct: 266 LPNLYTYSAMIDGYCKTGNVRQAYGLYKEILV-AELLPNVVVFGTLVDGFCKARELVTAR 324
Query: 240 RCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
+ G+ PN+ +N L+ + K + + ++ M+ + S + TY I+I+
Sbjct: 325 SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Query: 300 GKAGDLQQMEYLFRLMRSE 318
+ + LF+ M++E
Sbjct: 385 CIEDQVAEANRLFQKMKNE 403
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 108/238 (45%), Gaps = 6/238 (2%)
Query: 71 LWYRPNSGVYIKLIVMLGKCK--QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL 128
L +PN VYI I +L C+ + E+A ++F+ M G + + +Y+A++ Y ++G +
Sbjct: 228 LGIKPN--VYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNV 285
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
+A+ L +E+ P+V + L+ + + L M G+ PN YN
Sbjct: 286 RQAYGLYKEIL-VAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNC 344
Query: 189 LIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA 248
LI + K+ E L EM + PDV+T + Q+ R + K +
Sbjct: 345 LIHGHCKSGNMLEAVGLLSEM-ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403
Query: 249 GIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
I P+ T+N L+ Y K ++ ++ + M I+T++ +ID + D++
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIK 461
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 104/252 (41%), Gaps = 43/252 (17%)
Query: 69 EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL 128
E L P+ Y LI L Q +A LFQ M +E +Y +L+ Y + +
Sbjct: 366 ESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNM 425
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
E+A L EM ++ G +P++ T+S LI V GL +M I GI P+ VTY
Sbjct: 426 EQALDLCSEMTAS-GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTA 484
Query: 189 LIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA 248
LIDA+ K E+ + E L R Y A
Sbjct: 485 LIDAHFK-------EANMKEAL-----------------------------RLYSDMLEA 508
Query: 249 GIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHY---SWTIVTYNIVIDAFGKAGDL 305
GI PN TF L+D + K ++S +++ Q+ + W V + +I+ + G +
Sbjct: 509 GIHPNDHTFACLVDGFWKE---GRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYI 565
Query: 306 QQMEYLFRLMRS 317
+ F MRS
Sbjct: 566 LRASRFFSDMRS 577
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 7/283 (2%)
Query: 37 KKLLPRTVLEALHERVTALRWESAL--KVFELLREQLWYRPNSGVYIKLIVMLGKCKQPE 94
K L R ++++L ER+ S + ++F L + + + GV+ LI+ + E
Sbjct: 90 KYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFE 149
Query: 95 KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSIL 154
+AL + + M C D ++ ++L+ R + + + M S G PDV Y +L
Sbjct: 150 EALWVSREM---KCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISR-GLVPDVHIYFVL 205
Query: 155 IKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
+ C + + K + LL +M GIKPN Y I + + E E + E++
Sbjct: 206 FQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEK-MFELMKKHG 264
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
P+++T ++ + + G + Y + A + PNV F L+D + K +
Sbjct: 265 VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTAR 324
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
++ +M K+ + YN +I K+G++ + L M S
Sbjct: 325 SLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 95/214 (44%), Gaps = 17/214 (7%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQ--PEKALELFQAMVDEGCVVDCESYTA 117
A ++F+ ++ + + P+S Y LI G CK+ E+AL+L M G + +++
Sbjct: 393 ANRLFQKMKNERIF-PSSATYNSLI--HGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
L+ Y ++ A L EM + G PDV TY+ LI + + + L SDM
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEM-TIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWT---MNSTLRAFGNLGQ 234
GI PN T+ L+D + K R S ++ + + Q W + G
Sbjct: 509 GIHPNDHTFACLVDGFWKEGRL----SVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGY 564
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGH 268
I R + ++ GI P++ ++ +L KGH
Sbjct: 565 ILRASRFFSDMRSCGITPDICSYVSML----KGH 594
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/233 (21%), Positives = 95/233 (40%), Gaps = 2/233 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ +Y L K K +L M G + YT + R +E A +
Sbjct: 197 PDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKM 256
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
E MK G P++ TYS +I + + GL ++ + + PN V + TL+D +
Sbjct: 257 FELMKKH-GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFC 315
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
KA+ S V M+ P+++ N + G + + ++ + P+V
Sbjct: 316 KARELVTARSLFVHMV-KFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDV 374
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
T+ IL++ + + + + M+ + TYN +I + K +++Q
Sbjct: 375 FTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQ 427
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 3/264 (1%)
Query: 52 VTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVD 111
+ A R + ALK E++R + PN + + +C P KA E+ +++ +
Sbjct: 261 LIAGRVDEALKQLEMMRVR-KLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQ 319
Query: 112 CESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
Y A+L S + + + L ++ G PD T++ + L+ + +
Sbjct: 320 RVGYDAVLYCLSNNSMAKETGQFLRKIGER-GYIPDSSTFNAAMSCLLKGHDLVETCRIF 378
Query: 172 SDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
G+KP Y L+ A A+RFSE + L +M D V++ N+ +
Sbjct: 379 DGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVD-GLLSSVYSYNAVIDCLCK 437
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVT 291
+I+ + Q GI PN+ TFN L Y D KK+ V+E + + + ++T
Sbjct: 438 ARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVIT 497
Query: 292 YNIVIDAFGKAGDLQQMEYLFRLM 315
++++I+ +A +++ F+ M
Sbjct: 498 FSLIINCLCRAKEIKDAFDCFKEM 521
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 97/243 (39%), Gaps = 2/243 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
Y P+S + + L K + +F V G Y L+ A +
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L++M G V +Y+ +I + + L++M GI PN VT+NT +
Sbjct: 411 RYLKQM-GVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
Y ++ L ++L +PDV T + + +I C+ + GI+P
Sbjct: 470 YSVRGDVKKVHGVLEKLLV-HGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEP 528
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
N T+NIL+ S D + + M++ S + YN I +F K +++ E L
Sbjct: 529 NEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELL 588
Query: 313 RLM 315
+ M
Sbjct: 589 KTM 591
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 109/268 (40%), Gaps = 39/268 (14%)
Query: 71 LWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLER 130
L +P++ +Y +I L K + A FQ M +GC D +Y L+ + G+++
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 131 AFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLI 190
A L+++M+ G +P+V TY+ILI L D+ L M + + PN T T +
Sbjct: 234 AIRLVKQMEQE-GNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV 292
Query: 191 D----------AYGKAKRFSEMESTL------------------------VEMLADRDCQ 216
A+ F E +S L + + +R
Sbjct: 293 HGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYI 352
Query: 217 PDVWTMNSTLRAFGNLGQIDTMERC--YDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
PD T N+ + L D +E C +D F + G++P + +L+ + + +
Sbjct: 353 PDSSTFNAAMSCL--LKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKA 302
++ M ++ +YN VID KA
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKA 438
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Query: 65 ELLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
ELL+E YR + + LI G+ + ++F + G Y A++ A
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 123 SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
+S L+ A+ ++M+S GC+PD TY+ILI + D+ L+ M G +PN
Sbjct: 191 VKSNSLDLAYLKFQQMRSD-GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPN 249
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAF 229
TY LID + A R E L EM+ R P+ +T+R F
Sbjct: 250 VFTYTILIDGFLIAGRVDEALKQL-EMMRVRKLNPN----EATIRTF 291
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 2/163 (1%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+K + + ++ G D +++ +++ R+ ++ AF +EM G +P+ TY+I
Sbjct: 477 KKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEW-GIEPNEITYNI 535
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
LI+SC D+ L + M +G+ P+ YN I ++ K ++ + E L ML
Sbjct: 536 LIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRI- 594
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQT 256
+PD +T ++ ++A G+ + + G P+ T
Sbjct: 595 GLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYT 637
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 71/149 (47%), Gaps = 2/149 (1%)
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
+ L +A R G L + LL+E++ + G + + +LI S + + + ++
Sbjct: 114 SVLGNALFRKGPLLLSMELLKEIRDS-GYRISDELMCVLIGSWGRLGLAKYCNDVFAQIS 172
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G+KP+T YN +IDA K+ +M +D C+PD +T N + G +
Sbjct: 173 FLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSD-GCKPDRFTYNILIHGVCKKGVV 231
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSY 264
D R + + G +PNV T+ IL+D +
Sbjct: 232 DEAIRLVKQMEQEGNRPNVFTYTILIDGF 260
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 78/165 (47%), Gaps = 5/165 (3%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ P+S Y L+ +LGK +P AL M + G YT L+ SR+G LE
Sbjct: 285 FSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACK 344
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L+EM GC+PDV Y+++I + DK + + +M + G PN TYN++I
Sbjct: 345 YFLDEMVKA-GCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRG 403
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVW---TMNSTLRAFGNLGQ 234
A F E L EM R C P+ T+ S LR G L +
Sbjct: 404 LCMAGEFREACWLLKEM-ESRGCNPNFVVYSTLVSYLRKAGKLSE 447
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 2/200 (1%)
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
SY L+ ++ G + + L++EM G +T+++LI SC E +
Sbjct: 150 NSYHLLMKIFAECGEYKAMWRLVDEM-VQDGFPTTARTFNLLICSCGEAGLAKQAVVQFM 208
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
+P +YN ++++ K++ +E +ML D PDV T N L L
Sbjct: 209 KSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLED-GFSPDVLTYNILLWTNYRL 267
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
G++D +R +D+ G P+ T+NILL GKG+ + +M++ +++ Y
Sbjct: 268 GKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHY 327
Query: 293 NIVIDAFGKAGDLQQMEYLF 312
+ID +AG+L+ +Y
Sbjct: 328 TTLIDGLSRAGNLEACKYFL 347
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 109/243 (44%), Gaps = 2/243 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
YRP Y ++ L KQ + +++ M+++G D +Y LL R G ++R
Sbjct: 215 YRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFD 274
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L +EM + G PD TY+IL+ + L+ M GI P+ + Y TLID
Sbjct: 275 RLFDEM-ARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG 333
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
+A + L EM+ C+PDV + + G++D + + + G P
Sbjct: 334 LSRAGNLEACKYFLDEMVK-AGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP 392
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
NV T+N ++ ++++ +++ M+ + V Y+ ++ KAG L + +
Sbjct: 393 NVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVI 452
Query: 313 RLM 315
R M
Sbjct: 453 REM 455
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 113/294 (38%), Gaps = 39/294 (13%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A + F EQ +R Y L+ + +C + + L MV +G ++ L+
Sbjct: 132 AYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI 191
Query: 120 SAYSRSGLLERAFSLLEEMKSTP------------------------------------G 143
+ +GL ++A +++ MKS G
Sbjct: 192 CSCGEAGLAKQA--VVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDG 249
Query: 144 CQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEME 203
PDV TY+IL+ + + D+ L +MA G P++ TYN L+ GK +
Sbjct: 250 FSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAAL 309
Query: 204 STLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS 263
+TL M + P V + + G ++ + D+ AG +P+V + +++
Sbjct: 310 TTLNHM-KEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITG 368
Query: 264 YGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
Y + K + M + TYN +I AG+ ++ +L + M S
Sbjct: 369 YVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMES 422
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 63/136 (46%), Gaps = 1/136 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y LI L + E MV GC D YT +++ Y SG L++A +
Sbjct: 322 PSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEM 381
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
EM + G P+V TY+ +I+ F + LL +M G PN V Y+TL+
Sbjct: 382 FREM-TVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLR 440
Query: 195 KAKRFSEMESTLVEML 210
KA + SE + EM+
Sbjct: 441 KAGKLSEARKVIREMV 456
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 86/204 (42%), Gaps = 14/204 (6%)
Query: 87 LGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
LGK + ++ LF M +G D +Y LL + A + L MK G P
Sbjct: 267 LGKMDRFDR---LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEV-GIDP 322
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
V Y+ LI + + L +M G +P+ V Y +I Y + + +
Sbjct: 323 SVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMF 382
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY--DKFQTAGIQPNVQTFNIL---L 261
EM + P+V+T NS +R G+ E C+ + ++ G PN ++ L L
Sbjct: 383 REMTV-KGQLPNVFTYNSMIRGLCMAGEFR--EACWLLKEMESRGCNPNFVVYSTLVSYL 439
Query: 262 DSYGKGHDYKKMSAVMEYMQKYHY 285
GK + +K+ + E ++K HY
Sbjct: 440 RKAGKLSEARKV--IREMVKKGHY 461
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 84/194 (43%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y ++ ++A ++ M G + +Y LL Y + ++RA L
Sbjct: 450 PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDL 509
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L EM G +PDV +Y+I+I C+ + ++M GI P ++Y TL+ A+
Sbjct: 510 LREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFA 569
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+ + EM+ D + D+ N + + LG I+ +R + + G PNV
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 255 QTFNILLDSYGKGH 268
T+ L + +
Sbjct: 630 ATYGSLANGVSQAR 643
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 60/140 (42%), Gaps = 3/140 (2%)
Query: 181 PNTVTYNTLIDAYGKAKRFSEMESTLVEMLA--DRDCQPDVWTMNSTLRAFGNLGQIDTM 238
P++ Y TL+ Y K R ++ L M DR+ PD T + + AF N G +D
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 239 ERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM-EYMQKYHYSWTIVTYNIVID 297
+ + G+ N T+N+LL Y K + ++ E + +V+YNI+ID
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 298 AFGKAGDLQQMEYLFRLMRS 317
D F MR+
Sbjct: 532 GCILIDDSAGALAFFNEMRT 551
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
AL F M G SYT L+ A++ SG + A + +EM + P + D+ +++L+
Sbjct: 542 ALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLV 601
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
+ + + Q ++S M +G PN TY +L + +A++
Sbjct: 602 EGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARK 644
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 93 PEKALELFQAMV-------DEGCV----VDCESYTALLSAYSRSGLLERAFSLLEEMKST 141
PE++++LF A+ D+ V D ++ A+L+A + G ++ + L EEM S
Sbjct: 206 PEESIKLFIAITRRVKRFGDQSLVGQSRPDTAAFNAVLNACANLGDTDKYWKLFEEM-SE 264
Query: 142 PGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
C+PDV TY+++IK C V + + +L + GIK T ++L+ AY
Sbjct: 265 WDCEPDVLTYNVMIKLCARVGRKELIVFVLERIIDKGIKVCMTTMHSLVAAY 316
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 119/302 (39%), Gaps = 46/302 (15%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQP--EKALELFQAMVDEGCVVDCE 113
R + AL+ + +R + PN Y +VM G C+ +K +EL Q M G
Sbjct: 218 RVDIALRFYREMR-RCKISPNP--YTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
SY L++ + GLL A L + M G QP+V T++ LI + + +
Sbjct: 275 SYNTLIAGHCEKGLLSSALKL-KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M + PNTVTYNTLI+ Y + EM E + Q D+ T N+ + FG
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGD-HEMAFRFYEDMVCNGIQRDILTYNALI--FGLCK 390
Query: 234 QIDT--------------------------MERC-----------YDKFQTAGIQPNVQT 256
Q T M +C Y +G PN QT
Sbjct: 391 QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQT 450
Query: 257 FNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
FN+L+ ++ + D+ S V+ M + T + V + G Q ++ L + M
Sbjct: 451 FNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Query: 317 SE 318
+
Sbjct: 511 GK 512
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 4/222 (1%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
V+ L K+ A + F M D G + ES A +S+ G ++ A EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
+ P+ T ++++ DK LL DM G + V+YNTLI + +
Sbjct: 230 RRCK-ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFN 258
S L M+ QP+V T N+ + F ++ + + + + + PN T+N
Sbjct: 289 LSS-ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 259 ILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 300
L++ Y + D++ E M I+TYN +I FG
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI--FG 387
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 119/302 (39%), Gaps = 46/302 (15%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQP--EKALELFQAMVDEGCVVDCE 113
R + AL+ + +R + PN Y +VM G C+ +K +EL Q M G
Sbjct: 218 RVDIALRFYREMR-RCKISPNP--YTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
SY L++ + GLL A L + M G QP+V T++ LI + + +
Sbjct: 275 SYNTLIAGHCEKGLLSSALKL-KNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGE 333
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M + PNTVTYNTLI+ Y + EM E + Q D+ T N+ + FG
Sbjct: 334 MKAVNVAPNTVTYNTLINGYSQQGD-HEMAFRFYEDMVCNGIQRDILTYNALI--FGLCK 390
Query: 234 QIDT--------------------------MERC-----------YDKFQTAGIQPNVQT 256
Q T M +C Y +G PN QT
Sbjct: 391 QAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQT 450
Query: 257 FNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
FN+L+ ++ + D+ S V+ M + T + V + G Q ++ L + M
Sbjct: 451 FNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEME 510
Query: 317 SE 318
+
Sbjct: 511 GK 512
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 4/222 (1%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
V+ L K+ A + F M D G + ES A +S+ G ++ A EM
Sbjct: 170 VFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREM 229
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
+ P+ T ++++ DK LL DM G + V+YNTLI + +
Sbjct: 230 RRCK-ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFN 258
S L M+ QP+V T N+ + F ++ + + + + + PN T+N
Sbjct: 289 LSS-ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 259 ILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 300
L++ Y + D++ E M I+TYN +I FG
Sbjct: 348 TLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALI--FG 387
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 93/205 (45%), Gaps = 8/205 (3%)
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
TA++ + G A +L EM G P+V TY+ +I S + LL M
Sbjct: 14 TAIVDRLCKDGNHINAQNLFTEMHE-KGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMI 72
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
I P+ VT++ LI+A+ K ++ SE E EML P T NS + F ++
Sbjct: 73 EKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLR-WSIFPTTITYNSMIDGFCKQDRV 131
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI---VTY 292
D +R D + G P+V TF+ L++ Y K K++ ME + H + VTY
Sbjct: 132 DDAKRMLDSMASKGCSPDVVTFSTLINGYCKA---KRVDNGMEIFCEMHRRGIVANTVTY 188
Query: 293 NIVIDAFGKAGDLQQMEYLFRLMRS 317
+I F + GDL + L M S
Sbjct: 189 TTLIHGFCQVGDLDAAQDLLNEMIS 213
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 103/224 (45%), Gaps = 3/224 (1%)
Query: 59 SALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTAL 118
+A +F + E+ + PN Y +I + A +L + M+++ D +++AL
Sbjct: 28 NAQNLFTEMHEKGIF-PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSAL 86
Query: 119 LSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHG 178
++A+ + + A + +EM P TY+ +I + D + +L MA G
Sbjct: 87 INAFVKERKVSEAEEIYKEMLRW-SIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG 145
Query: 179 IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTM 238
P+ VT++TLI+ Y KAKR EM R + T + + F +G +D
Sbjct: 146 CSPDVVTFSTLINGYCKAKRVDNGMEIFCEM-HRRGIVANTVTYTTLIHGFCQVGDLDAA 204
Query: 239 ERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQK 282
+ ++ + G+ P+ TF+ +L + +K A++E +QK
Sbjct: 205 QDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 117/267 (43%), Gaps = 9/267 (3%)
Query: 50 ERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCV 109
+R+T W K+F+ + +L N VY L+ K PEKA +L M ++G
Sbjct: 181 QRLTDTVW----KIFKKMV-KLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVF 235
Query: 110 VDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQG 169
D +Y L+S Y + + A S+ + M+ + G P++ TY+ I +
Sbjct: 236 PDIFTYNTLISVYCKKSMHFEALSVQDRMERS-GVAPNIVTYNSFIHGFSREGRMREATR 294
Query: 170 LLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAF 229
L ++ + N VTY TLID Y + E L E++ R P V T NS LR
Sbjct: 295 LFREIK-DDVTANHVTYTTLIDGYCRMNDIDE-ALRLREVMESRGFSPGVVTYNSILRKL 352
Query: 230 GNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI 289
G+I R + I+P+ T N L+++Y K D V + M + +
Sbjct: 353 CEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDM 412
Query: 290 VTYNIVIDAFGKAGDLQQM-EYLFRLM 315
+Y +I F K +L+ E LF ++
Sbjct: 413 YSYKALIHGFCKVLELENAKEELFSMI 439
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 114/240 (47%), Gaps = 5/240 (2%)
Query: 77 SGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLE 136
S V+ L++ K ++ +F+ + G ++ T LL++ + L + + + +
Sbjct: 133 SHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFK 192
Query: 137 EMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKA 196
+M G ++ Y++L+ +C + +K + LLS+M G+ P+ TYNTLI Y
Sbjct: 193 KMVKL-GVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVY--C 249
Query: 197 KRFSEMESTLVEMLADRD-CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
K+ E+ V+ +R P++ T NS + F G++ R + + + + N
Sbjct: 250 KKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHV 308
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
T+ L+D Y + +D + + E M+ +S +VTYN ++ + G +++ L M
Sbjct: 309 TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 108/236 (45%), Gaps = 6/236 (2%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y I + + +A LF+ + D+ + +YT L+ Y R ++ A L
Sbjct: 271 PNIVTYNSFIHGFSREGRMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRL 329
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
E M+S G P V TY+ +++ E + LL++M+ I+P+ +T NTLI+AY
Sbjct: 330 REVMESR-GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYC 388
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
K + +M+ + + D+++ + + F + +++ + G P
Sbjct: 389 KIEDMVSAVKVKKKMI-ESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGY 447
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEY 310
T++ L+D + + +++ ++E +K + Y +I K L+Q++Y
Sbjct: 448 ATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICK---LEQVDY 500
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 89/204 (43%), Gaps = 37/204 (18%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
++ L+ Y+++G++ + + E+++S G +P +Q ++L+ S ++ D V + M
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSC-GLKPHLQACTVLLNSLVKQRLTDTVWKIFKKM 194
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
G+ N YN L+ A K+ G
Sbjct: 195 VKLGVVANIHVYNVLVHACSKS------------------------------------GD 218
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNI 294
+ E+ + + G+ P++ T+N L+ Y K + + +V + M++ + IVTYN
Sbjct: 219 PEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNS 278
Query: 295 VIDAFGKAGDLQQMEYLFRLMRSE 318
I F + G +++ LFR ++ +
Sbjct: 279 FIHGFSREGRMREATRLFREIKDD 302
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 2/203 (0%)
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y +L + + GLLE A +L E ++ +Q+Y+I ++ + F + + +L
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDL-ASLQSYNIWLQGLVRHGKFIEAETVLKQ 351
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M GI P+ +YN L+D K S+ + T+V ++ PD T L + ++G
Sbjct: 352 MTDKGIGPSIYSYNILMDGLCKLGMLSDAK-TIVGLMKRNGVCPDAVTYGCLLHGYCSVG 410
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
++D + + PN T NILL S K + ++ M + Y VT N
Sbjct: 411 KVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCN 470
Query: 294 IVIDAFGKAGDLQQMEYLFRLMR 316
I++D +G+L + + + MR
Sbjct: 471 IIVDGLCGSGELDKAIEIVKGMR 493
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 113/260 (43%), Gaps = 23/260 (8%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN+ L+ L K + +A EL + M ++G +D + ++ SG L++A +
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Query: 135 LEEMKS----------------------TPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
++ M+ C PD+ TYS L+ + F + + L +
Sbjct: 489 VKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFA 548
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
+M ++P++V YN I + K + S L +M + C + T NS + G
Sbjct: 549 EMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM-EKKGCHKSLETYNSLILGLGIK 607
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
QI + D+ + GI PN+ T+N + +G + + +++ M + + + + ++
Sbjct: 608 NQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSF 667
Query: 293 NIVIDAFGKAGDLQQMEYLF 312
+I+AF K D + +F
Sbjct: 668 KYLIEAFCKVPDFDMAQEVF 687
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 124/263 (47%), Gaps = 7/263 (2%)
Query: 58 ESALKVFELLREQL-WYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
+ A F+L+R + +P+ +Y L+ K ++ E L++ MV G ++
Sbjct: 92 DKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFN 151
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
L+ A S ++ A L +EM GC+P+ T+ IL++ + DK LL+ M
Sbjct: 152 LLIRALCDSSCVDAARELFDEMPEK-GCKPNEFTFGILVRGYCKAGLTDKGLELLNAMES 210
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
G+ PN V YNT++ ++ + R + E +VE + + PD+ T NS + A G++
Sbjct: 211 FGVLPNKVIYNTIVSSFCREGRNDDSEK-MVEKMREEGLVPDIVTFNSRISALCKEGKVL 269
Query: 237 TMERCYDKFQT---AGI-QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
R + + G+ +PN T+N++L + K + + E +++ ++ +Y
Sbjct: 270 DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSY 329
Query: 293 NIVIDAFGKAGDLQQMEYLFRLM 315
NI + + G + E + + M
Sbjct: 330 NIWLQGLVRHGKFIEAETVLKQM 352
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 4/245 (1%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P + + LI L + A ELF M ++GC + ++ L+ Y ++GL ++ L
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L M+S G P+ Y+ ++ S D + ++ M G+ P+ VT+N+ I A
Sbjct: 205 LNAMESF-GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 195 KAKRFSEMESTLVEMLADRDC---QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQ 251
K + + +M D +P+ T N L+ F +G ++ + ++ +
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 252 PNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
++Q++NI L + + + V++ M +I +YNI++D K G L + +
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 312 FRLMR 316
LM+
Sbjct: 384 VGLMK 388
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 87/206 (42%), Gaps = 37/206 (17%)
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKST-PGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
S +++S +++S +++AF + ++S P +P V Y++L++SC++ + V L
Sbjct: 77 SLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYK 136
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
DM + GI P T T+N LI A L D C
Sbjct: 137 DMVLCGIAPQTYTFNLLIRA-----------------LCDSSC----------------- 162
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
+D +D+ G +PN TF IL+ Y K K ++ M+ + V Y
Sbjct: 163 --VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIY 220
Query: 293 NIVIDAFGKAGDLQQMEYLFRLMRSE 318
N ++ +F + G E + MR E
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREE 246
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 2/177 (1%)
Query: 102 AMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV 161
++++ C+ D +Y+ LL+ ++G A +L EM QPD Y+I I +
Sbjct: 514 SLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK-LQPDSVAYNIFIHHFCKQ 572
Query: 162 FAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWT 221
+L DM G + TYN+LI G + E+ + EM ++ P++ T
Sbjct: 573 GKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM-KEKGISPNICT 631
Query: 222 MNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVME 278
N+ ++ +++ D+ I PNV +F L++++ K D+ V E
Sbjct: 632 YNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 111/284 (39%), Gaps = 33/284 (11%)
Query: 58 ESALKVFELLREQ--LWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
E A +FE +RE L + ++++ +V GK + E L + M D+G SY
Sbjct: 308 EDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL---KQMTDKGIGPSIYSY 364
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
L+ + G+L A +++ MK C PD TY L+ V D + LL +M
Sbjct: 365 NILMDGLCKLGMLSDAKTIVGLMKRNGVC-PDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
+ PN T N L+ + K R SE E L +M ++ D T N + G++
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELLRKM-NEKGYGLDTVTCNIIVDGLCGSGEL 482
Query: 236 D------------------TMERCY-----DKFQTAGIQPNVQTFNILLDSYGKGHDYKK 272
D + Y D P++ T++ LL+ K + +
Sbjct: 483 DKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAE 542
Query: 273 MSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ M V YNI I F K G + FR+++
Sbjct: 543 AKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSA---FRVLK 583
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 107/263 (40%), Gaps = 27/263 (10%)
Query: 79 VYIKLIVMLGKCK--QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLE 136
+Y I+M G CK A + M G D +Y LL Y G ++ A SLL+
Sbjct: 361 IYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQ 420
Query: 137 EMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA---- 192
EM C P+ T +IL+ S ++ + + LL M G +TVT N ++D
Sbjct: 421 EMMRN-NCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGS 479
Query: 193 ---------------YGKAKRFSEMESTLVEMLAD----RDCQPDVWTMNSTLRAFGNLG 233
+G A + ++ + ++ D +C PD+ T ++ L G
Sbjct: 480 GELDKAIEIVKGMRVHGSAA-LGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
+ + + + +QP+ +NI + + K V++ M+K ++ TYN
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 294 IVIDAFGKAGDLQQMEYLFRLMR 316
+I G + ++ L M+
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMK 621
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 109/258 (42%), Gaps = 12/258 (4%)
Query: 54 ALRWESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDC 112
A R+ A +F E++ E+L +P+S Y I K + A + + M +GC
Sbjct: 537 AGRFAEAKNLFAEMMGEKL--QPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSL 594
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
E+Y +L+ + L++EMK G P++ TY+ I+ E + LL
Sbjct: 595 ETYNSLILGLGIKNQIFEIHGLMDEMKEK-GISPNICTYNTAIQYLCEGEKVEDATNLLD 653
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFS---EMESTLVEMLADRDCQPDVWTMNSTLRAF 229
+M I PN ++ LI+A+ K F E+ T V + ++ + N L A
Sbjct: 654 EMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSL-MFNELLAAG 712
Query: 230 GNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI 289
L + +E D+ G + + L++S K + + S ++ M Y +
Sbjct: 713 QLLKATELLEAVLDR----GFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDP 768
Query: 290 VTYNIVIDAFGKAGDLQQ 307
VID GK G+ ++
Sbjct: 769 AALMPVIDGLGKMGNKKE 786
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 116/261 (44%), Gaps = 9/261 (3%)
Query: 56 RWESALKVFELLREQLWYRPNSGVY---IKLIVMLGKCKQPEKALELFQAMVDEGCVVDC 112
R++ ALKVF L+ +P+ + +++ +M G+ E+AL LF M G D
Sbjct: 511 RFDEALKVFRLM-GIYGIKPDVATFTTVMRVSIMEGRL---EEALFLFFRMFKMGLEPDA 566
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
+Y L+ A+ + L + M+ D+ +++I + + +
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNK-ISADIAVCNVVIHLLFKCHRIEDASKFFN 625
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
++ ++P+ VTYNT+I Y +R E E + E+L P+ T+ +
Sbjct: 626 NLIEGKMEPDIVTYNTMICGYCSLRRLDEAER-IFELLKVTPFGPNTVTLTILIHVLCKN 684
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
+D R + G +PN T+ L+D + K D + + E MQ+ S +IV+Y
Sbjct: 685 NDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSY 744
Query: 293 NIVIDAFGKAGDLQQMEYLFR 313
+I+ID K G + + +F
Sbjct: 745 SIIIDGLCKRGRVDEATNIFH 765
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 92 QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTY 151
Q E A L ++D G + ++ L++ + + G ++RAF L + M+ G +PD+ Y
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR-GIEPDLIAY 324
Query: 152 SILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA 211
S LI + L S G+K + V +++ ID Y K+ + ML
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 212 DRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYK 271
+ P+V T ++ G+I Y + G++P++ T++ L+D + K + +
Sbjct: 385 -QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 272 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
A+ E M K Y +V Y +++D K G
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 12/246 (4%)
Query: 75 PNSGVYIKLIVMLGKCKQPE--KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
PN + LI G CK+ E +A +LF+ M G D +Y+ L+ Y ++G+L
Sbjct: 284 PNVVTFCTLIN--GFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L + G + DV +S I ++ + M GI PN VTY LI
Sbjct: 342 KLFSQALHK-GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
+ R E ++L R +P + T +S + F G + + Y+ G P
Sbjct: 401 LCQDGRIYEAFGMYGQILK-RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEY---MQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
+V + +L+D K M M + M +V +N +ID + + +
Sbjct: 460 DVVIYGVLVDGLSK---QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 310 YLFRLM 315
+FRLM
Sbjct: 517 KVFRLM 522
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 105/253 (41%), Gaps = 4/253 (1%)
Query: 62 KVFELLR--EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
+ F+L + EQ P+ Y LI K +LF + +G +D +++ +
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
Y +SG L A + + M G P+V TY+ILIK + + G+ + G+
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM 422
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
+P+ VTY++LID + K L E + PDV + G +
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRS-GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAM 481
Query: 240 RCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
R K I+ NV FN L+D + + + + + V M Y + T+ V+
Sbjct: 482 RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 300 GKAGDLQQMEYLF 312
G L++ +LF
Sbjct: 542 IMEGRLEEALFLF 554
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 90/200 (45%), Gaps = 2/200 (1%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
+I +L KC + E A + F +++ D +Y ++ Y L+ A + E +K TP
Sbjct: 607 VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTP 666
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
P+ T +ILI + D + S MA G KPN VTY L+D + K+ E
Sbjct: 667 -FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDI-EG 724
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
L E + ++ P + + + + G++D + + A + P+V + IL+
Sbjct: 725 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 784
Query: 263 SYGKGHDYKKMSAVMEYMQK 282
Y K + + + E+M +
Sbjct: 785 GYCKVGRLVEAALLYEHMLR 804
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 3/163 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R + A ++FELL+ + PN+ LI +L K + A+ +F M ++G + +Y
Sbjct: 651 RLDEAERIFELLKVT-PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 709
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
L+ +S+S +E +F L EEM+ G P + +YSI+I + D+ +
Sbjct: 710 GCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 768
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
+ P+ V Y LI Y K R E + L E + +PD
Sbjct: 769 DAKLLPDVVAYAILIRGYCKVGRLVE-AALLYEHMLRNGVKPD 810
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 104/246 (42%), Gaps = 4/246 (1%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
R N V+ LI + + ++AL++F+ M G D ++T ++ G LE A
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALF 552
Query: 134 LLEEMKSTPGCQPDVQTYSILIKS-CLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L M G +PD Y LI + C + +Q L M + I + N +I
Sbjct: 553 LFFRMFKM-GLEPDALAYCTLIDAFCKHMKPTIGLQ-LFDLMQRNKISADIAVCNVVIHL 610
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
K R E S L + +PD+ T N+ + + +L ++D ER ++ + P
Sbjct: 611 LFKCHRI-EDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
N T IL+ K +D + M + VTY ++D F K+ D++ LF
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729
Query: 313 RLMRSE 318
M+ +
Sbjct: 730 EEMQEK 735
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 170 LLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMEST--LVEMLADRDCQPDVWTMNSTLR 227
LLS + G PN VT+ TLI+ + K EM+ L +++ R +PD+ ++ +
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKR---GEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW 287
+ G + + + + G++ +V F+ +D Y K D S V + M S
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 288 TIVTYNIVIDAFGKAGDLQQ 307
+VTY I+I + G + +
Sbjct: 390 NVVTYTILIKGLCQDGRIYE 409
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 7/237 (2%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y LI L K E+AL L M+ EG + +YTA++ + G LE AF L +
Sbjct: 280 YSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL 339
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
S G + D Y LI ++ +L DM GI+P+ +TYNT+I+ A R
Sbjct: 340 SV-GIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRV 398
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
SE + + DV T ++ L ++ + ID + +F A I ++ NI
Sbjct: 399 SEADEV------SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNI 452
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
LL ++ Y + A+ M + + TY +I + K G +++ +F +R
Sbjct: 453 LLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR 509
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 122/295 (41%), Gaps = 46/295 (15%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E AL FE + PN Y L+ L + + ++ +L + + DEG DC Y+
Sbjct: 188 ELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSN 247
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
+ Y + G L A EM G DV +YSILI + ++ GLL M
Sbjct: 248 WIHGYFKGGALVDALMQDREMVE-KGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKE 306
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSE------------------MESTLVE----------- 208
G++PN +TY +I K + E + TL++
Sbjct: 307 GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRA 366
Query: 209 --MLAD---RDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS 263
ML D R QP + T N+ + G++ + + G+ +V T++ LLDS
Sbjct: 367 FSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDS 421
Query: 264 YGKGHDYKKMSAVMEYMQKY---HYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
Y K + + AV+E +++ +V NI++ AF G + + L+R M
Sbjct: 422 YIK---VQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAM 473
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 103/235 (43%), Gaps = 14/235 (5%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y +I L K + E+A LF ++ G VD Y L+ R G L RAFS+
Sbjct: 310 PNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSM 369
Query: 135 LEEMKSTPGCQPDVQTYSILIKS-CL--EVFAFDKVQGLLSDMAIHGIKPNTVTYNTLID 191
L +M+ G QP + TY+ +I C+ V D+V G+ + +TY+TL+D
Sbjct: 370 LGDMEQR-GIQPSILTYNTVINGLCMAGRVSEADEVS--------KGVVGDVITYSTLLD 420
Query: 192 AYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQ 251
+Y K + + L + D+ N L+AF +G + Y +
Sbjct: 421 SYIKVQNIDAVLEIRRRFLEAK-IPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLT 479
Query: 252 PNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
P+ T+ ++ Y K ++ + ++K S V YN +IDA K G L
Sbjct: 480 PDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAA-VCYNRIIDALCKKGMLD 533
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 140/303 (46%), Gaps = 17/303 (5%)
Query: 15 ILRREATKAII---DKRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQL 71
I R + +K ++ D R G S T ++ V ++A++V E++ +
Sbjct: 109 ITRDDPSKGLLILRDCLRNHGAFPSS----LTFCSLIYRFVEKGEMDNAIEVLEMMTNKN 164
Query: 72 WYRPNSGVYIKLIVMLGKCK--QPEKALELFQAMVDEGCVV-DCESYTALLSAYSRSGLL 128
P ++ V+ G CK +PE AL F++ VD G +V + +YT L+SA + G +
Sbjct: 165 VNYPFDN-FVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKV 223
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD--MAIHGIKPNTVTY 186
+ L+ ++ G + D YS I + A V L+ D M G+ + V+Y
Sbjct: 224 DEVRDLVRRLED-EGFEFDCVFYSNWIHGYFKGGAL--VDALMQDREMVEKGMNRDVVSY 280
Query: 187 NTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQ 246
+ LID K E L +M+ + +P++ T + +R +G+++ +++
Sbjct: 281 SILIDGLSKEGNVEEALGLLGKMIKE-GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRIL 339
Query: 247 TAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
+ GI+ + + L+D + + + +++ M++ +I+TYN VI+ AG +
Sbjct: 340 SVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVS 399
Query: 307 QME 309
+ +
Sbjct: 400 EAD 402
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 4/183 (2%)
Query: 84 IVMLGKCKQP--EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKST 141
I++ G CK+ KAL L G ++ +Y +L++ + G L A L + +++
Sbjct: 660 IIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENI 719
Query: 142 PGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
G P TY ILI + + F + LL M G+ PN + YN+++D Y K + +
Sbjct: 720 -GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTED 778
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
+ + R PD +T++S ++ + G ++ + +F+ I + F L+
Sbjct: 779 AMRVVSRKMMGR-VTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLI 837
Query: 262 DSY 264
+
Sbjct: 838 KGF 840
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 112/263 (42%), Gaps = 12/263 (4%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEG----CVVDC 112
+E+A++V+ ++R + +K +V ++L+ + +V+ G +D
Sbjct: 602 FEAAIEVYMIMRRKGLTVTFPSTILKTLV------DNLRSLDAYLLVVNAGETTLSSMDV 655
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
YT +++ + G L +A +L KS G + TY+ LI + + L
Sbjct: 656 IDYTIIINGLCKEGFLVKALNLCSFAKSR-GVTLNTITYNSLINGLCQQGCLVEALRLFD 714
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
+ G+ P+ VTY LID K F + E L M++ + P++ NS + + L
Sbjct: 715 SLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVS-KGLVPNIIIYNSIVDGYCKL 773
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
GQ + R + + P+ T + ++ Y K D ++ +V + + S +
Sbjct: 774 GQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGF 833
Query: 293 NIVIDAFGKAGDLQQMEYLFRLM 315
+I F G +++ L R M
Sbjct: 834 LFLIKGFCTKGRMEEARGLLREM 856
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 125/300 (41%), Gaps = 36/300 (12%)
Query: 42 RTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQ 101
R++ L+ + R++ +F+ +E PN L+ L K E A ++
Sbjct: 156 RSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLD 215
Query: 102 AMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV 161
+ G V + +YT +L Y G +E A +LEEM G PD TY++L+ ++
Sbjct: 216 EIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR-GWYPDATTYTVLMDGYCKL 274
Query: 162 FAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA---------- 211
F + ++ DM + I+PN VTY +I A K K+ E + EML
Sbjct: 275 GRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLC 334
Query: 212 ------------------------DRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQT 247
+C PD +++ + G++ + +D+F+
Sbjct: 335 CKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEK 394
Query: 248 AGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
I P++ T+N L+ + + + + + M + TYN++I+ K G++++
Sbjct: 395 GSI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKE 453
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 1/188 (0%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
++I L+ G + E ++ +F + D G S LL+ ++ + ++ +
Sbjct: 122 LFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNS 181
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
K + G P++ T ++L+K+ + + +L ++ G+ PN VTY T++ Y
Sbjct: 182 KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGD 241
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFN 258
+ L EML DR PD T + + LG+ D + I+PN T+
Sbjct: 242 MESAKRVLEEML-DRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYG 300
Query: 259 ILLDSYGK 266
+++ + K
Sbjct: 301 VMIRALCK 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 3/162 (1%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ P+S + K+I L + + ++A L++ M+ C+ D + L+ + G + A
Sbjct: 327 FMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEAR 386
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L +E + G P + TY+ LI E + L DM KPN TYN LI+
Sbjct: 387 KLFDEFEK--GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEG 444
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
K E L EML + C P+ T LG+
Sbjct: 445 LSKNGNVKEGVRVLEEML-EIGCFPNKTTFLILFEGLQKLGK 485
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/229 (18%), Positives = 103/229 (44%), Gaps = 3/229 (1%)
Query: 82 KLIVMLGKCKQPEKALELF--QAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
+L+ M+ + + + AL++F G + ++Y ++L SR+ + SL+ +++
Sbjct: 51 RLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLR 110
Query: 140 ST-PGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
++ P + + L+++ ++ + + G+K + + NTL++ + +R
Sbjct: 111 NSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQR 170
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFN 258
F + + P+++T N ++A I++ + D+ + G+ PN+ T+
Sbjct: 171 FDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYT 230
Query: 259 ILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+L Y D + V+E M + TY +++D + K G +
Sbjct: 231 TILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSE 279
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 92 QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTY 151
Q E A L ++D G + ++ L++ + + G ++RAF L + M+ G +PD+ Y
Sbjct: 266 QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR-GIEPDLIAY 324
Query: 152 SILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA 211
S LI + L S G+K + V +++ ID Y K+ + ML
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 212 DRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYK 271
+ P+V T ++ G+I Y + G++P++ T++ L+D + K + +
Sbjct: 385 -QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 272 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
A+ E M K Y +V Y +++D K G
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 18/251 (7%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
R N V+ LI + + ++AL++F+ M G D ++T ++ R ++E AF
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM----RVSIMEDAFC 548
Query: 134 LLEEMKSTPGCQ-----------PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
+ MK T G Q D+ +++I + + +++ ++P+
Sbjct: 549 --KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPD 606
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY 242
VTYNT+I Y +R E E + E+L P+ T+ + +D R +
Sbjct: 607 IVTYNTMICGYCSLRRLDEAER-IFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMF 665
Query: 243 DKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKA 302
G +PN T+ L+D + K D + + E MQ+ S +IV+Y+I+ID K
Sbjct: 666 SIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKR 725
Query: 303 GDLQQMEYLFR 313
G + + +F
Sbjct: 726 GRVDEATNIFH 736
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 101/246 (41%), Gaps = 12/246 (4%)
Query: 75 PNSGVYIKLIVMLGKCKQPE--KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
PN + LI G CK+ E +A +LF+ M G D +Y+ L+ Y ++G+L
Sbjct: 284 PNVVTFCTLIN--GFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L + G + DV +S I ++ + M GI PN VTY LI
Sbjct: 342 KLFSQALHK-GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKG 400
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
+ R E ++L R +P + T +S + F G + + Y+ G P
Sbjct: 401 LCQDGRIYEAFGMYGQILK-RGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPP 459
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEY---MQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
+V + +L+D K M M + M +V +N +ID + + +
Sbjct: 460 DVVIYGVLVDGLSK---QGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 310 YLFRLM 315
+FRLM
Sbjct: 517 KVFRLM 522
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 109/284 (38%), Gaps = 41/284 (14%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y LI KC L++ M+ G D Y L+ S+ GL+ A
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLI---- 190
+M + +V ++ LI + FD+ + M I+GIKP+ T+ T++
Sbjct: 484 SVKMLGQ-SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 191 --DAYGKAKR-------FSEME---------------------------STLVEMLADRD 214
DA+ K + F M+ S L +
Sbjct: 543 MEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 602
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
+PD+ T N+ + + +L ++D ER ++ + PN T IL+ K +D
Sbjct: 603 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 662
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ M + VTY ++D F K+ D++ LF M+ +
Sbjct: 663 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEK 706
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 100/223 (44%), Gaps = 3/223 (1%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
L++F+L++ + V +I +L KC + E A + F +++ D +Y ++
Sbjct: 556 GLQLFDLMQRN-KISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
Y L+ A + E +K TP P+ T +ILI + D + S MA G
Sbjct: 615 CGYCSLRRLDEAERIFELLKVTP-FGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 673
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
KPN VTY L+D + K+ E L E + ++ P + + + + G++D
Sbjct: 674 KPNAVTYGCLMDWFSKSVDI-EGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732
Query: 240 RCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQK 282
+ + A + P+V + IL+ Y K + + + E+M +
Sbjct: 733 NIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLR 775
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 77/163 (47%), Gaps = 3/163 (1%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R + A ++FELL+ + PN+ LI +L K + A+ +F M ++G + +Y
Sbjct: 622 RLDEAERIFELLKVT-PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 680
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
L+ +S+S +E +F L EEM+ G P + +YSI+I + D+ +
Sbjct: 681 GCLMDWFSKSVDIEGSFKLFEEMQEK-GISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
+ P+ V Y LI Y K R E + L E + +PD
Sbjct: 740 DAKLLPDVVAYAILIRGYCKVGRLVE-AALLYEHMLRNGVKPD 781
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 5/140 (3%)
Query: 170 LLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMEST--LVEMLADRDCQPDVWTMNSTLR 227
LLS + G PN VT+ TLI+ + K EM+ L +++ R +PD+ ++ +
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKR---GEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW 287
+ G + + + + G++ +V F+ +D Y K D S V + M S
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP 389
Query: 288 TIVTYNIVIDAFGKAGDLQQ 307
+VTY I+I + G + +
Sbjct: 390 NVVTYTILIKGLCQDGRIYE 409
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 103/248 (41%), Gaps = 2/248 (0%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y P+ + L+ + A L MV G + Y L+ ++G L
Sbjct: 134 KLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELN 193
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A LL EM+ G DV TY+ L+ + +L DM I P+ VT+ L
Sbjct: 194 IALELLNEMEK-KGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
ID + K E + EM+ P+ T NS + G++ ++ +D + G
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQS-SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
PNV T+N L+ + K + + + M ++ I TYN +I + + G L+
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 310 YLFRLMRS 317
+F M S
Sbjct: 372 DIFCWMVS 379
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 5/266 (1%)
Query: 54 ALRWESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDC 112
++R+E A +F E++ Q P+ + +L+ ++ E + Q M G D
Sbjct: 49 SIRFEDAFALFFEMVHSQPL--PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDL 106
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
S+T L+ + R L A S+L +M G +P + T+ L+ V L+
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKL-GYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
M G +PN V YNTLID K + L EM + DV T N+ L
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEM-EKKGLGADVVTYNTLLTGLCYS 224
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
G+ R I P+V TF L+D + K + + + + M + VTY
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 293 NIVIDAFGKAGDLQQMEYLFRLMRSE 318
N +I+ G L + F LM S+
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASK 310
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 110/264 (41%), Gaps = 5/264 (1%)
Query: 56 RWESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCES 114
RW A ++ ++++ + P+ + LI + K ++A EL++ M+ + +
Sbjct: 226 RWSDAARMLRDMMKRSI--NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
Y ++++ G L A + M S GC P+V TY+ LI + D+ L M
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMAS-KGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
+ G + TYNTLI Y + + M++ R PD+ T L G+
Sbjct: 343 SCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS-RRVTPDIITHCILLHGLCVNGE 401
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNI 294
I++ +D + + + +NI++ K +K + + TY I
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461
Query: 295 VIDAFGKAGDLQQMEYLFRLMRSE 318
+I K G ++ + L R M+ E
Sbjct: 462 MILGLCKNGPRREADELIRRMKEE 485
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 107/231 (46%), Gaps = 2/231 (0%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
YRP Y ++ L KQ + +++ M+++G D +Y ++ A R G +R +
Sbjct: 218 YRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLY 277
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
LL+EM G PD+ TY+IL+ LL+ M G++P + + TLID
Sbjct: 278 RLLDEM-VKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDG 336
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
+A + + + E + C PDV + + + G+++ E + + G P
Sbjct: 337 LSRAGKLEACKYFMDETVK-VGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLP 395
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
NV T+N ++ + +K+ A+++ M+ + V Y+ +++ AG
Sbjct: 396 NVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAG 446
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 62 KVFELLREQL--WYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
+++ LL E + + P+ Y L+ L +P AL L M + G +T L+
Sbjct: 275 RLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLI 334
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
SR+G LE ++E GC PDV Y+++I + +K + + +M G
Sbjct: 335 DGLSRAGKLEACKYFMDETVKV-GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQ 393
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
PN TYN++I + A +F E + L EM R C P+ ++ + N G++
Sbjct: 394 LPNVFTYNSMIRGFCMAGKFKEACALLKEM-ESRGCNPNFVVYSTLVNNLKNAGKV 448
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 4/198 (2%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV-FAFDKVQGLLSD 173
Y L+ ++ G + L++EM G T+++LI +C E A D V+ +
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIK-DGYPTTACTFNLLICTCGEAGLARDVVEQFIKS 213
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
+ +P +YN ++ + K++ ++ +ML D PDV T N + A LG
Sbjct: 214 KTFN-YRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLED-GFTPDVLTYNIVMFANFRLG 271
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
+ D + R D+ G P++ T+NILL G+ ++ +M++ ++ +
Sbjct: 272 KTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFT 331
Query: 294 IVIDAFGKAGDLQQMEYL 311
+ID +AG L+ +Y
Sbjct: 332 TLIDGLSRAGKLEACKYF 349
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 110/278 (39%), Gaps = 37/278 (13%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAM--VDEGCVVDCES 114
W A F Q Y + Y ++ +LGKC+ + EL M +E +V ++
Sbjct: 146 WNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDT 205
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGC------------------------------ 144
+ ++ ++SG +A EM+ + G
Sbjct: 206 MSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL 265
Query: 145 ----QPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS 200
+PD +T++ILI + FD + ++ M + P+ VTY + ++AY K F
Sbjct: 266 FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
+ L EM + C P+V T + + G Q+ Y+K + G P+ + ++ L
Sbjct: 326 RVNEMLEEM-RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSL 384
Query: 261 LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
+ K +K + + E M ++ YN +I A
Sbjct: 385 IHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/321 (22%), Positives = 141/321 (43%), Gaps = 21/321 (6%)
Query: 4 SKIASQKAVSVILRR--------EATKAIIDKRRKKGPINSKKLLPRTVLEAL-HERVTA 54
SK+ + +S ++RR +A A ++ + G + + + ++++AL E
Sbjct: 198 SKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYG-VKTDTIAMNSLMDALVKENSIE 256
Query: 55 LRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCES 114
E LK+F+ ++ P++ + LI K ++ + A + M D +
Sbjct: 257 HAHEVFLKLFDTIK------PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVT 310
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
YT+ + AY + G R +LEEM+ GC P+V TY+I++ S + + G+ M
Sbjct: 311 YTSFVEAYCKEGDFRRVNEMLEEMREN-GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKM 369
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
G P+ Y++LI K RF + + + E + ++ + DV N+ + A + +
Sbjct: 370 KEDGCVPDAKFYSSLIHILSKTGRFKDA-AEIFEDMTNQGVRRDVLVYNTMISAALHHSR 428
Query: 235 IDTMERCYDKFQT---AGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVT 291
+ R + + PNV+T+ LL K + ++ +M K S + T
Sbjct: 429 DEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVST 488
Query: 292 YNIVIDAFGKAGDLQQMEYLF 312
Y ++I +G +++ F
Sbjct: 489 YILLIRGLCMSGKVEEACLFF 509
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 95/210 (45%), Gaps = 7/210 (3%)
Query: 62 KVFELLREQLWYRPNSGVYIKLIVM--LGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
+V E+L E N V IVM LGK KQ +AL +++ M ++GCV D + Y++L+
Sbjct: 326 RVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLI 385
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL---SDMAI 176
S++G + A + E+M + G + DV Y+ +I + L + LL D
Sbjct: 386 HILSKTGRFKDAAEIFEDM-TNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEG 444
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
PN TY L+ K+ ++ L+ + D DV T +R G+++
Sbjct: 445 ESCSPNVETYAPLL-KMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVE 503
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
+++ G+ P T +L+D K
Sbjct: 504 EACLFFEEAVRKGMVPRDSTCKMLVDELEK 533
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 2/193 (1%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y +I + G+ Q +KA+E+F G +D + YT ++ Y + G + A SL EM+
Sbjct: 812 YNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQ 871
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
G +P +Y++++K C +V LL M +G + TY TLI Y ++ +F
Sbjct: 872 KK-GIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQF 930
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
+E E T+ ++ ++ +S L A G ++ ER Y K AGI P+
Sbjct: 931 AEAEKTIT-LVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRT 989
Query: 260 LLDSYGKGHDYKK 272
+L Y D +K
Sbjct: 990 ILKGYMTCGDAEK 1002
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 112/265 (42%), Gaps = 20/265 (7%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
W F ++ QL YRP+ VY ++ + G+ + + A E F M++ GC D +
Sbjct: 168 WRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACG 227
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQT--YSILIKSCLEVFAFDKVQGLLSDM 174
+L Y+R G R ++L K+ + + T Y+ ++ S + KV L +M
Sbjct: 228 TMLCTYARWG---RHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEM 284
Query: 175 AIHGIKPNTVTYNTLIDAYGKA-------KRFSEMESTLVEMLADRDCQPDVWTMNSTLR 227
G+ PN TY ++ +Y K K F EM+S P+ T +S +
Sbjct: 285 VEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSL--------GFVPEEVTYSSVIS 336
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW 287
G + Y+ ++ GI P+ T +L Y K +Y K ++ M++
Sbjct: 337 LSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPA 396
Query: 288 TIVTYNIVIDAFGKAGDLQQMEYLF 312
V ++I +GK G + +F
Sbjct: 397 DEVIRGLIIRIYGKLGLFHDAQSMF 421
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 124/282 (43%), Gaps = 12/282 (4%)
Query: 24 IIDKRRKKGPINSKK----LLPRTVL--EALHERVTALRWESALKVFELLRE---QLWYR 74
+++ R K+G +N K L+ +T L A++ +++ E + E++ + +L R
Sbjct: 608 MLNLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLR 667
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
LI + G+ + ++A L+ A E +++ AY R G LE A+ L
Sbjct: 668 MEEETIATLIAVYGRQHKLKEAKRLYLA-AGESKTPGKSVIRSMIDAYVRCGWLEDAYGL 726
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
E + GC P T SIL+ + + + + I+ +TV YNTLI A
Sbjct: 727 FME-SAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAML 785
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+A + + S + E + + T N+ + +G Q+D + + +G+ +
Sbjct: 786 EAGKL-QCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDE 844
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ + ++ YGKG + ++ MQK +YN+++
Sbjct: 845 KIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/219 (21%), Positives = 93/219 (42%), Gaps = 21/219 (9%)
Query: 107 GCVVDCESYTALLSAYSRSGLLERA--FSLLEEMKSTPGCQPDVQTYSILIKSCLEVFA- 163
G ++ E+ L++ Y R L+ A L TPG +I+S ++ +
Sbjct: 665 GLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPG--------KSVIRSMIDAYVR 716
Query: 164 ---FDKVQGLLSDMAIHGIKPNTVTYNTLIDAY---GKAKRFSEMESTLVEMLADRDCQP 217
+ GL + A G P VT + L++A GK + + T +E ++ +
Sbjct: 717 CGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLE----KNIEL 772
Query: 218 DVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM 277
D N+ ++A G++ Y++ T+G+ ++QT+N ++ YG+G K +
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIF 832
Query: 278 EYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
++ Y +I +GK G + + LF M+
Sbjct: 833 SNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQ 871
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/337 (20%), Positives = 123/337 (36%), Gaps = 73/337 (21%)
Query: 53 TALRW--ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVV 110
T RW SA+ F ++ ++ VY ++ L K K ++L+ MV+EG
Sbjct: 232 TYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPP 291
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
+ +YT ++S+Y++ G E A EMKS G P+ TYS +I ++ ++K GL
Sbjct: 292 NEFTYTLVVSSYAKQGFKEEALKAFGEMKSL-GFVPEEVTYSSVISLSVKAGDWEKAIGL 350
Query: 171 LSDMAIHGIKPNTVTYNTL-----------------------------------IDAYGK 195
DM GI P+ T T+ I YGK
Sbjct: 351 YEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGK 410
Query: 196 AKRFSEMEST----------------------------------LVEMLADRDCQPDVWT 221
F + +S ++EM+ RD +
Sbjct: 411 LGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFA 470
Query: 222 MNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQ 281
L+ + + +D E + G+ P+ + N +L+ Y + + +K ++ +
Sbjct: 471 YIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNLGEKAKGFIKQIM 529
Query: 282 KYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ I Y + + K G + + + L M E
Sbjct: 530 VDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGRE 566
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 127/276 (46%), Gaps = 8/276 (2%)
Query: 43 TVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKA-LELFQ 101
TV + + A WE A+ +F+ L E N+ L+ L K K+ E+A + L Q
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGE-FGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ 215
Query: 102 AMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV 161
+ + ++ + + ++ +E A ++EMK G +P V +Y+ +I+ +
Sbjct: 216 --LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKG-HGFRPCVISYTTIIRCYCQQ 272
Query: 162 FAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWT 221
F F KV +LS+M +G PN++TY T++ + K F E M C+PD
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM-KRSGCKPDSLF 331
Query: 222 MNSTLRAFGNLGQIDTMERCYD-KFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYM 280
N + G+++ ER + + G+ N T+N ++ Y + K +++ M
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM 391
Query: 281 QKYHY-SWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ + + + TY ++ + K GD+ ++ L + M
Sbjct: 392 ESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 116/258 (44%), Gaps = 4/258 (1%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
W SAL + + ++ +S Y + +LGK K+ ++ E + M + +V +
Sbjct: 101 WRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDK-LVTLNTVA 159
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
++ ++ +G E A + + + G + + ++ ++L+ + + ++ + +L +
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEF-GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS 218
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
H I PN T+N I + KA R E T+ EM +P V + + +R + +
Sbjct: 219 H-ITPNAHTFNIFIHGWCKANRVEEALWTIQEM-KGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ + + G PN T+ ++ S ++++ V M++ + YN +I
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 297 DAFGKAGDLQQMEYLFRL 314
+AG L++ E +FR+
Sbjct: 337 HTLARAGRLEEAERVFRV 354
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDE-GCVVDCESYTALLSAYSRSGLLERAF 132
+P+S Y LI L + + E+A +F+ + E G ++ +Y ++++ Y ++A
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAI 385
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI-HGIKPNTVTYNTLID 191
LL+EM+S+ C PDV TY L++SC + +V LL +M H + + TY LI
Sbjct: 386 ELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Query: 192 AYGKAKRFSEMESTLVEMLADRDCQP 217
+A E L E + +D P
Sbjct: 446 RLCRAN-MCEWAYCLFEEMISQDITP 470
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 127/276 (46%), Gaps = 8/276 (2%)
Query: 43 TVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKA-LELFQ 101
TV + + A WE A+ +F+ L E N+ L+ L K K+ E+A + L Q
Sbjct: 157 TVAKIMRRFAGAGEWEEAVGIFDRLGE-FGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ 215
Query: 102 AMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV 161
+ + ++ + + ++ +E A ++EMK G +P V +Y+ +I+ +
Sbjct: 216 --LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKG-HGFRPCVISYTTIIRCYCQQ 272
Query: 162 FAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWT 221
F F KV +LS+M +G PN++TY T++ + K F E M C+PD
Sbjct: 273 FEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM-KRSGCKPDSLF 331
Query: 222 MNSTLRAFGNLGQIDTMERCYD-KFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYM 280
N + G+++ ER + + G+ N T+N ++ Y + K +++ M
Sbjct: 332 YNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEM 391
Query: 281 QKYHY-SWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ + + + TY ++ + K GD+ ++ L + M
Sbjct: 392 ESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 116/258 (44%), Gaps = 4/258 (1%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
W SAL + + ++ +S Y + +LGK K+ ++ E + M + +V +
Sbjct: 101 WRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDK-LVTLNTVA 159
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
++ ++ +G E A + + + G + + ++ ++L+ + + ++ + +L +
Sbjct: 160 KIMRRFAGAGEWEEAVGIFDRLGEF-GLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKS 218
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
H I PN T+N I + KA R E T+ EM +P V + + +R + +
Sbjct: 219 H-ITPNAHTFNIFIHGWCKANRVEEALWTIQEM-KGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ + + G PN T+ ++ S ++++ V M++ + YN +I
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 297 DAFGKAGDLQQMEYLFRL 314
+AG L++ E +FR+
Sbjct: 337 HTLARAGRLEEAERVFRV 354
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDE-GCVVDCESYTALLSAYSRSGLLERAF 132
+P+S Y LI L + + E+A +F+ + E G ++ +Y ++++ Y ++A
Sbjct: 326 KPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAI 385
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI-HGIKPNTVTYNTLID 191
LL+EM+S+ C PDV TY L++SC + +V LL +M H + + TY LI
Sbjct: 386 ELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQ 445
Query: 192 AYGKAKRFSEMESTLVEMLADRDCQP 217
+A E L E + +D P
Sbjct: 446 RLCRAN-MCEWAYCLFEEMISQDITP 470
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 115/270 (42%), Gaps = 9/270 (3%)
Query: 52 VTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVD 111
V+A+ +SA +VFE++ E +P+ Y +I K Q +KA+E + M G D
Sbjct: 233 VSAMFVDSAERVFEVM-ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEAD 291
Query: 112 CESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
+Y ++ A +L +EM G Q +S++I + ++ +
Sbjct: 292 KITYMTMIQACYADSDFGSCVALYQEMDEK-GIQVPPHAFSLVIGGLCKEGKLNEGYTVF 350
Query: 172 SDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
+M G KPN Y LID Y K+ + L M+ D +PDV T + +
Sbjct: 351 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI-DEGFKPDVVTYSVVVNGLCK 409
Query: 232 LGQIDTMERCYDKFQTA---GIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWT 288
G++ E D F T G+ N ++ L+D GK + + E M + +
Sbjct: 410 NGRV---EEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRD 466
Query: 289 IVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
YN +IDAF K + + LF+ M E
Sbjct: 467 SYCYNALIDAFTKHRKVDEAIALFKRMEEE 496
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 114/281 (40%), Gaps = 2/281 (0%)
Query: 38 KLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKAL 97
KL P V L + + A F R+Q Y N Y+ L+ +L K ++
Sbjct: 113 KLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIR 172
Query: 98 ELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS 157
+ + + + AL+ ++ + G++E + +MK G +P + TY+ L+
Sbjct: 173 FVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKEN-GIEPTLYTYNFLMNG 231
Query: 158 CLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQP 217
+ D + + M IKP+ VTYNT+I Y KA + + L +M R +
Sbjct: 232 LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDM-ETRGHEA 290
Query: 218 DVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM 277
D T + ++A + Y + GIQ F++++ K + V
Sbjct: 291 DKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVF 350
Query: 278 EYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
E M + + Y ++ID + K+G ++ L M E
Sbjct: 351 ENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE 391
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 77/187 (41%), Gaps = 1/187 (0%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+PN +Y LI K E A+ L M+DEG D +Y+ +++ ++G +E A
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
+ G + YS LI + D+ + L +M+ G ++ YN LIDA+
Sbjct: 419 YFHTCR-FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
K ++ E + M + C V+T L + + + +D GI P
Sbjct: 478 TKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPT 537
Query: 254 VQTFNIL 260
F L
Sbjct: 538 AACFRAL 544
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 91/216 (42%), Gaps = 18/216 (8%)
Query: 24 IIDKRRKKGPI-NSKKLLPRTVLEALHERVTAL-----------RWESALKVFELLREQL 71
+ID K G + ++ +LL R + E V R E AL F R
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFD- 426
Query: 72 WYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERA 131
NS Y LI LGK + ++A LF+ M ++GC D Y AL+ A+++ ++ A
Sbjct: 427 GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEA 486
Query: 132 FSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLID 191
+L + M+ GC V TY+IL+ + ++ L M GI P + L
Sbjct: 487 IALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALST 546
Query: 192 AY---GKAKRFSEMESTLVEM--LADRDCQPDVWTM 222
GK R ++ L M + D C+ + T+
Sbjct: 547 GLCLSGKVARACKILDELAPMGVILDAACEDMINTL 582
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 111/225 (49%), Gaps = 3/225 (1%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM--KSTPGCQPDVQTY 151
E A++ M + G +Y L+ Y +G ER+ LL+ M + P+++T+
Sbjct: 132 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTF 191
Query: 152 SILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVE-ML 210
++L+++ + ++ ++ M G++P+TVTYNT+ Y + ES +VE M+
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 211 ADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDY 270
+P+ T + + G++ R + + ++ N+ FN L++ + + D
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 271 KKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ V+ M++ + ++TY+ V++A+ AG +++ +F+ M
Sbjct: 312 DGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEM 356
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Query: 145 QPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMES 204
+ DV TYS ++ + +K + +M G+KP+ Y+ L Y +AK + E
Sbjct: 327 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 386
Query: 205 TLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY 264
L ++ + +P+V + + + + G +D R ++K G+ PN++TF L+ Y
Sbjct: 387 LLETLIVES--RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 444
Query: 265 GKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
+ K V++ M+ T+ ++ +A+ AG
Sbjct: 445 LEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAG 483
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 148 VQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLV 207
V++ + L+ +E + Q + +A G +P+ ++Y TL+ A K++ + S++V
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSI-SSIV 103
Query: 208 EMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKG 267
+ + D N+ + AF G ++ + K + G+ P T+N L+ YG
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 268 HDYKKMSAVMEYM---QKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
++ S +++ M I T+N+++ A+ K +++
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEE 206
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
Query: 84 IVMLGKCK--QPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKST 141
I++ G C+ Q A+EL M+++G V D SYT LL++ R L A+ LL MK
Sbjct: 230 ILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMK-L 288
Query: 142 PGCQPDVQTYSILIKS-CLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS 200
GC PD+ Y+ +I C E A D + +L DM +G PN+V+Y TLI F
Sbjct: 289 KGCNPDLVHYNTMILGFCREDRAMD-ARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFD 347
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
E + L EM++ + P N ++ F + G+++
Sbjct: 348 EGKKYLEEMIS-KGFSPHFSVSNCLVKGFCSFGKVE 382
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 89/214 (41%), Gaps = 2/214 (0%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+KA ELF++ G + + SY L+ A+ + L A+ L +M PDV +Y I
Sbjct: 172 QKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLER-DVVPDVDSYKI 230
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
LI+ + LL DM G P+ ++Y TL+++ + + E L M +
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL-K 289
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
C PD+ N+ + F + + D + G PN ++ L+ + +
Sbjct: 290 GCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEG 349
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+E M +S N ++ F G +++
Sbjct: 350 KKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
>AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:13116547-13118059 FORWARD
LENGTH=452
Length = 452
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 87/189 (46%), Gaps = 10/189 (5%)
Query: 60 ALKVFELLREQLWY--RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGC---VVDCES 114
AL+V E R Q Y S Y K I + G+ + A+ LF DE +
Sbjct: 85 ALQVLEWRRGQKDYCIPLTSEEYAKGIKIAGRARDINLAVYLF----DEAAKKRMQTASV 140
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
Y +L+S Y +GL E SL ++ + C P V TY+IL+ + ++ ++
Sbjct: 141 YNSLMSVYMWNGLAEECQSLFKDFRRQTHCAPTVVTYNILVSVYGRLLMVKNMEAAFEEL 200
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
+ PN+VTYN LI Y A + +ME+T EM +PD T LR + N G
Sbjct: 201 QKVKLPPNSVTYNFLIAGYMTAWNWDKMEATFQEM-KRGPVEPDTDTYQLMLRGYANSGN 259
Query: 235 IDTMERCYD 243
++ ME Y+
Sbjct: 260 LNRMEEMYE 268
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 63/134 (47%)
Query: 185 TYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDK 244
YN+L+ Y E +S + C P V T N + +G L + ME +++
Sbjct: 140 VYNSLMSVYMWNGLAEECQSLFKDFRRQTHCAPTVVTYNILVSVYGRLLMVKNMEAAFEE 199
Query: 245 FQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
Q + PN T+N L+ Y ++ KM A + M++ TY +++ + +G+
Sbjct: 200 LQKVKLPPNSVTYNFLIAGYMTAWNWDKMEATFQEMKRGPVEPDTDTYQLMLRGYANSGN 259
Query: 305 LQQMEYLFRLMRSE 318
L +ME ++ +++ +
Sbjct: 260 LNRMEEMYEVIKDQ 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 8/233 (3%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PNS Y LI +K FQ M D ++Y +L Y+ SG L R +
Sbjct: 207 PNSVTYNFLIAGYMTAWNWDKMEATFQEMKRGPVEPDTDTYQLMLRGYANSGNLNRMEEM 266
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFA--FDKVQGLLSDMAIHGIKP--NTVTYNTLI 190
E +K G +++ C + K++ LLS ++ P N + LI
Sbjct: 267 YEVIKDQVGVNSGPLVRAMICAYCKKAVEDRVQKIENLLSLLSGEEYLPWLNVL----LI 322
Query: 191 DAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
Y + MES + E + C M + + A+ ++D + + ++AG
Sbjct: 323 RLYAQEDFVEAMESKINEAFEQKTCVNKSSIMRAIIAAYFRCNEVDNLANFVKRAESAGW 382
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
+ ++ + YG +++M V+ M + +Y T+ I+I A+ G
Sbjct: 383 KLCRSLYHCKIMMYGSQKRFEEMEGVVNEMAETNYGLVTKTFAIMIKAYKNHG 435
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 118/300 (39%), Gaps = 63/300 (21%)
Query: 79 VYIKLIVMLGK----CKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
VY+ L L + C++ A AM G V D + +L+ ++ +GL+ SL
Sbjct: 56 VYVSLFHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSL 115
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEV----FAF-------------------------- 164
+ G PDV ++LI S +V FA
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHG 175
Query: 165 --DKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEML------------ 210
D+ LS+M GI P+TV+YNTLID + K F ++ + E+
Sbjct: 176 LADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLS 235
Query: 211 ----------ADRDC-----QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
A RD PDV T +S + G++ + + + PN
Sbjct: 236 SYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHV 295
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
T+ L+DS K + Y+ A+ M +V Y +++D KAGDL++ E F+++
Sbjct: 296 TYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 355
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 76/179 (42%), Gaps = 2/179 (1%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
VY LI L K +KA + M G + D ++ +L+ Y + +A S M
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 739
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
G P+V TY+ +I+ + +V LS+M G++P+ TYN LI K
Sbjct: 740 MEA-GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF 257
+ EM+AD P T N + F N+G++ + G+ PN T+
Sbjct: 799 MKGSMTIYCEMIAD-GLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTY 856
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 105/233 (45%), Gaps = 11/233 (4%)
Query: 85 VMLGKCKQ--PEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
V+ G C+ ++A + MV G + D SY L+ + + G RA +L++E+
Sbjct: 167 VISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEIS--- 223
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
+ ++ T++IL+ S + A ++ DM + G P+ VT++++I+ K + E
Sbjct: 224 --ELNLITHTILLSSYYNLHAIEEAY---RDMVMSGFDPDVVTFSSIINRLCKGGKVLEG 278
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
L EM + P+ T + + + Y + GI ++ + +L+D
Sbjct: 279 GLLLREM-EEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMD 337
Query: 263 SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
K D ++ + + + + +VTY ++D KAGDL E++ M
Sbjct: 338 GLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQM 390
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 126/291 (43%), Gaps = 39/291 (13%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A K F++L E PN Y L+ L K A + M+++ + + +Y++++
Sbjct: 348 AEKTFKMLLEDNQV-PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI----KSCLEVFAFD---------- 165
+ Y + G+LE A SLL +M+ P+ TY +I K+ E A +
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQ-NVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGV 465
Query: 166 ---------------------KVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMES 204
+V+GL+ DM G+ + + Y +LID + K +
Sbjct: 466 EENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALA 525
Query: 205 TLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY 264
EM +R DV + N + G++ + Y + GI+P++ TFNI+++S
Sbjct: 526 WAEEM-QERGMPWDVVSYNVLISGMLKFGKVGA-DWAYKGMREKGIEPDIATFNIMMNSQ 583
Query: 265 GKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
K D + + + + M+ ++++ NIV+ + G +++ ++ M
Sbjct: 584 RKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQM 634
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 2/218 (0%)
Query: 100 FQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCL 159
++ M ++G D ++ ++++ + G E L ++MKS G +P + + +I++
Sbjct: 561 YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC-GIKPSLMSCNIVVGMLC 619
Query: 160 EVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDV 219
E ++ +L+ M + I PN TY +D K KR + T E L +
Sbjct: 620 ENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTH-ETLLSYGIKLSR 678
Query: 220 WTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEY 279
N+ + LG + G P+ TFN L+ Y G +K +
Sbjct: 679 QVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSV 738
Query: 280 MQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
M + S + TYN +I AG +++++ M+S
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKS 776
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 103/260 (39%), Gaps = 34/260 (13%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN Y +I K E+A+ L + M D+ V + +Y ++ ++G E A L
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+EM+ G + + L+ + +V+GL+ DM G+ + + Y +LID +
Sbjct: 457 SKEMRLI-GVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFF 515
Query: 195 KAKRFSEMESTLVEM---------------------------------LADRDCQPDVWT 221
K + EM + ++ +PD+ T
Sbjct: 516 KGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIAT 575
Query: 222 MNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQ 281
N + + G + + + +DK ++ GI+P++ + NI++ + ++ ++ M
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 282 KYHYSWTIVTYNIVIDAFGK 301
+ TY I +D K
Sbjct: 636 LMEIHPNLTTYRIFLDTSSK 655
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 95/231 (41%), Gaps = 20/231 (8%)
Query: 32 GPINSKKLLPRTVL--EALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGK 89
G + ++ +P TV +H AL + ++ E PN Y +I L
Sbjct: 702 GDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA-GISPNVATYNTIIRGLSD 760
Query: 90 CKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQ 149
++ + M G D +Y AL+S ++ G ++ + ++ EM + G P
Sbjct: 761 AGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIA-DGLVPKTS 819
Query: 150 TYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY------------GKAK 197
TY++LI V + + LL +M G+ PNT TY T+I KA
Sbjct: 820 TYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAM 879
Query: 198 RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG-QIDT---MERCYDK 244
+E + L EM+ ++ P T+ AF G ++D ++ CY K
Sbjct: 880 YLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKVDAERFLKECYKK 930
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 7/232 (3%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ PN + +++ + + +A ++ M+ G V ++ L+S + RSG ++A
Sbjct: 208 FYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAV 267
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L +M GC P++ TY+ LIK +++ D+ +LS + G+ P+ V N +I
Sbjct: 268 DLFNKMIQI-GCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT 326
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
Y + RF E L R PD +T S L + G+ D + R G
Sbjct: 327 YTRLGRFEEARKVFTS-LEKRKLVPDQYTFASILSSLCLSGKFDLVPRIT---HGIGTDF 382
Query: 253 NVQTFNILLDSYGK-GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
++ T N+L + + K G++ + V+ M ++ TY + + A + G
Sbjct: 383 DLVTGNLLSNCFSKIGYNSYALK-VLSIMSYKDFALDCYTYTVYLSALCRGG 433
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 14/287 (4%)
Query: 40 LPRTVLEALHERVTALR---WESALK-VFELLREQLWYRPNSGVYIKLIVMLGKCKQPEK 95
LP TV A++E + LR S K VFE L+ ++ ++ Y I G +
Sbjct: 209 LPGTV--AVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDA 266
Query: 96 ALELFQAMVDEGCVV------DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQ 149
AL LF+ M + V D +Y +L+ G + A + +E+K + G +PD
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVS-GHEPDNS 325
Query: 150 TYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEM 209
TY ILI+ C + + D + +M +G P+T+ YN L+D KA++ +E L E
Sbjct: 326 TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTE-ACQLFEK 384
Query: 210 LADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHD 269
+ + WT N + G+ + + + G + TF+I+ +
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Query: 270 YKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ ++E M+ +S +VT + ++ F K G E L + +R
Sbjct: 445 LEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIR 491
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 9/174 (5%)
Query: 95 KALELFQAMVDEGCVVDCESYT--ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYS 152
K E+F M V D SYT +++S++ + G + A +L++M C D+ TY+
Sbjct: 615 KLFEIFNGM----GVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFEN-FCAADIATYN 669
Query: 153 ILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLAD 212
++I+ ++ D +L + G + V YNTLI+A GKA R E + L + +
Sbjct: 670 VIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDE-ATQLFDHMKS 728
Query: 213 RDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
PDV + N+ + G++ + AG PN T + +LD GK
Sbjct: 729 NGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT-DTILDYLGK 781
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 62/125 (49%), Gaps = 1/125 (0%)
Query: 183 TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY 242
+ TYN+++ ++ K F L +M + C D+ T N ++ G +G+ D
Sbjct: 630 SYTYNSMMSSFVKKGYFQTARGVLDQMFENF-CAADIATYNVIIQGLGKMGRADLASAVL 688
Query: 243 DKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKA 302
D+ G ++ +N L+++ GK + + + ++M+ + +V+YN +I+ KA
Sbjct: 689 DRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKA 748
Query: 303 GDLQQ 307
G L++
Sbjct: 749 GKLKE 753
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 2/159 (1%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A K+FE+ S Y ++ K + A + M + C D +Y ++
Sbjct: 613 ACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVII 672
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+ G + A ++L+ + + G D+ Y+ LI + + D+ L M +GI
Sbjct: 673 QGLGKMGRADLASAVLDRL-TKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGI 731
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
P+ V+YNT+I+ KA + E L ML D C P+
Sbjct: 732 NPDVVSYNTMIEVNSKAGKLKEAYKYLKAML-DAGCLPN 769
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Query: 87 LGKCKQPEKALELFQAMVDEGC-VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQ 145
L +C Q E A + F MV+ G VV S T +++ +G + RA L+EEM G +
Sbjct: 184 LKRCDQMELARDFFSLMVESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVK 243
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMEST 205
++ T+ +I C++ + F+++ +L M + + +Y LID + + E E
Sbjct: 244 ANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAER- 302
Query: 206 LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYG 265
LV M+ D+ + + + N + + G ++ + Y + + G+ PN T+ +L++
Sbjct: 303 LVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLC 362
Query: 266 KG 267
K
Sbjct: 363 KA 364
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 8/276 (2%)
Query: 42 RTVLEALHERVTALRWESALKVFELLREQLWYRPNS-GVYIKLIVMLGKCKQPEKALELF 100
R VL L +R E+ + E+ R + +S V +++ V G Q + E F
Sbjct: 414 RAVLHILCQRKMVAEVEAVIA--EMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERF 471
Query: 101 QAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLE 160
Q CV+ + A++ Y+ GL A ++ ++ G + DV Y+++IK+ +
Sbjct: 472 QL----DCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGK 527
Query: 161 VFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVW 220
+K L M G P+ TYN+L E + L EML D C+P
Sbjct: 528 AKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML-DSGCKPGCK 586
Query: 221 TMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYM 280
T + + ++ LG + Y+ + G++PN + L++ + + ++ M
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 281 QKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+++ + +I A+ K G L++ ++ M+
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMK 682
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 107/260 (41%), Gaps = 37/260 (14%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
W A VF R R + Y +I GK K EKAL LF+ M ++G D +Y
Sbjct: 495 WVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYN 554
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
+L + L++ A +L EM + GC+P +TY+ +I S + + L M
Sbjct: 555 SLFQMLAGVDLVDEAQRILAEMLDS-GCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEK 613
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
G+KPN V Y +LI+ + ++ E M+ + Q + + S ++A+ +G ++
Sbjct: 614 TGVKPNEVVYGSLINGFAESGMVEEAIQYF-RMMEEHGVQSNHIVLTSLIKAYSKVGCLE 672
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
R YDK + + P+V N +L ++
Sbjct: 673 EARRVYDKMKDSEGGPDVAASNSML-------------------------------SLCA 701
Query: 297 DAFGKAGDLQQMEYLFRLMR 316
D G + + E +F +R
Sbjct: 702 DL----GIVSEAESIFNALR 717
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 118/246 (47%), Gaps = 10/246 (4%)
Query: 77 SGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLE 136
+ + LI + GK + A LF M+ G +D ++ ++ G L A SLL+
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLK 364
Query: 137 EMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKA 196
+M+ G PD +TY+IL+ + + + G+ P+TVT+ ++ +
Sbjct: 365 KMEEK-GISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR 423
Query: 197 KRFSEMESTLVEMLADRDC-QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
K +E+E+ + EM DR+ + D ++ ++ + N G + + +++FQ + +
Sbjct: 424 KMVAEVEAVIAEM--DRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSST- 480
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWT---IVTYNIVIDAFGKAGDLQQMEYLF 312
T ++D Y + + + V + K + S ++ YN++I A+GKA ++ LF
Sbjct: 481 TLAAVIDVYAEKGLWVEAETV--FYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLF 538
Query: 313 RLMRSE 318
+ M+++
Sbjct: 539 KGMKNQ 544
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 100/281 (35%), Gaps = 58/281 (20%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
RWE L+VF + Y PN Y ++ LG+ + ++ + M G + +Y
Sbjct: 124 RWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTY 183
Query: 116 TALLSAYSR-----------------------------------SGLLERA--------- 131
L+ Y + SG +RA
Sbjct: 184 GMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCA 243
Query: 132 ------FSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN--- 182
+++ Q V L +V A + ++ L + P
Sbjct: 244 GKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPR 303
Query: 183 -TVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERC 241
T T+NTLID YGKA R ++ + EML D T N+ + G G + E
Sbjct: 304 LTSTFNTLIDLYGKAGRLNDAANLFSEMLKS-GVPIDTVTFNTMIHTCGTHGHLSEAESL 362
Query: 242 YDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQK 282
K + GI P+ +T+NILL + D + A +EY +K
Sbjct: 363 LKKMEEKGISPDTKTYNILLSLHADAGD---IEAALEYYRK 400
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 88/211 (41%), Gaps = 29/211 (13%)
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
ER + +S P+V Y+I++++ +D+++ +MA +G+ P TY
Sbjct: 126 ERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGM 185
Query: 189 LIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA 248
L+D YGKA E ++ + R PD TM + +R F N G+ D +R + +
Sbjct: 186 LVDVYGKAGLVKE-ALLWIKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCAG 244
Query: 249 GIQPNVQTFNILLDSYGKGHDYK--------------KMSAVMEYMQKYHYSWT------ 288
+ ++ + +D + K + K+ A + H++
Sbjct: 245 KVDLDLDS----IDDFPKNGSAQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPR 300
Query: 289 ----IVTYNIVIDAFGKAGDLQQMEYLFRLM 315
T+N +ID +GKAG L LF M
Sbjct: 301 KPRLTSTFNTLIDLYGKAGRLNDAANLFSEM 331
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A+ ++E + E+ +PN VY LI + E+A++ F+ M + G + T+L+
Sbjct: 604 AVDLYEAM-EKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
AYS+ G LE A + ++MK + G PDV + ++ C ++ + + + + + G
Sbjct: 663 KAYSKVGCLEEARRVYDKMKDSEG-GPDVAASNSMLSLCADLGIVSEAESIFNALREKGT 721
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
+ +++ T++ Y E EM + D + N + + GQ+
Sbjct: 722 -CDVISFATMMYLYKGMGMLDEAIEVAEEM-RESGLLSDCTSFNQVMACYAADGQL 775
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 7/280 (2%)
Query: 36 SKKLLPRTVLEALHERVTA-LRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQP- 93
S ++ P +VL +H + L+ ES E+ + G I +L CKQ
Sbjct: 408 SVRIAPSSVL--VHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF-CKQGK 464
Query: 94 -EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYS 152
+ A + M +G + Y ++ A+ R ++ A S+ EM G +P+ TYS
Sbjct: 465 VDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK-GLEPNNFTYS 523
Query: 153 ILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLAD 212
ILI + +++ M + N V YNT+I+ K + S+ + L ++ +
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Query: 213 RDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKK 272
+ + NS + F +G D+ Y + G PNV TF L++ + K +
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 643
Query: 273 MSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+ M+ + Y +ID F K D++ LF
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLF 683
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y +I K + A+E ++ M + G + ++T+L++ + +S ++ A + EMK
Sbjct: 593 YNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMK 652
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
S + D+ Y LI + L S++ G+ PN YN+LI + +
Sbjct: 653 SME-LKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGF---RNL 708
Query: 200 SEMEST--LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF 257
+M++ L + + + D++T + + G I+ Y + GI P+
Sbjct: 709 GKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILH 768
Query: 258 NILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
+L++ K + K S ++E M+K + ++ Y+ VI + G+L + FRL
Sbjct: 769 MVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEA---FRL 822
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 100/222 (45%), Gaps = 13/222 (5%)
Query: 88 GKCKQPE--KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQ 145
G CK E KAL+LF M +EG D ++ ++ + ++ +E+A MKS
Sbjct: 354 GYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAP 413
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDM----AIHGIKPNTVTYNTLIDAYGKAKRFSE 201
V ++ +I+ CL+ + + + +D HG N + L GK +
Sbjct: 414 SSVLVHT-MIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFL--LFCKQGKV----D 466
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
++ ++M+ + +P+V N+ + A + +D + + G++PN T++IL+
Sbjct: 467 AATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILI 526
Query: 262 DSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
D + K D + V+ M ++ V YN +I+ K G
Sbjct: 527 DGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVG 568
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 84/176 (47%), Gaps = 4/176 (2%)
Query: 88 GKCKQPE--KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQ 145
G CK+ + A LF + + G + + Y +L+S + G ++ A L ++M + G
Sbjct: 669 GFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVND-GIS 727
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMEST 205
D+ TY+ +I L+ + L S++ GI P+ + + L++ K +F + S
Sbjct: 728 CDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLK-ASK 786
Query: 206 LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
++E + +D P+V ++ + G ++ R +D+ GI + FN+L+
Sbjct: 787 MLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLV 842
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 2/153 (1%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
++A +F L E L PN VY LI + + A++L++ MV++G D +YT
Sbjct: 677 KTAYTLFSELPE-LGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
++ + G + A L E+ G PD + +L+ + F K +L +M
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDL-GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKK 794
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEML 210
+ PN + Y+T+I + + +E EML
Sbjct: 795 DVTPNVLLYSTVIAGHHREGNLNEAFRLHDEML 827
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 120/265 (45%), Gaps = 18/265 (6%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E A+ F L E+L P+S Y L+ L + AL++ + M + G V+ +
Sbjct: 374 EDAIFKFNKLHEELDIVPSSTSYENLVSYLCGSNEVVTALDIVENMCEAGLVISANILHS 433
Query: 118 LLSAYSRS---GLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
LL A + L++R +S++ S +P+ +T+ I C+ + F+ +L ++
Sbjct: 434 LLQAIEQILEFNLVQRIYSIM----SNKSVKPNSETFRKSINLCIRIKDFEGAYNMLGNL 489
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
+ PN+ YN+++ Y + K+ + L EM + D +PD T + + G+
Sbjct: 490 KNFNLAPNSSMYNSIMAGYFREKKVNSALKVLKEM-KEADVKPDSVTFSYLINY---CGE 545
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAV---MEYMQKYHYSWTIVT 291
T+ + Y + + AG++ N + L+ +Y ++K V +E K H
Sbjct: 546 EATIAKYYKEMKQAGVEVNKHVYMSLVKAYASCGQFEKAKQVLMDLEVPAKDHNELK--- 602
Query: 292 YNIVIDAFGKAGDLQQMEYLFRLMR 316
+++I A G++ + ++ M+
Sbjct: 603 -SVLISALASNGNITEALSIYEEMK 626
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 127/290 (43%), Gaps = 8/290 (2%)
Query: 30 KKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGK 89
+ G K V+ H R L +E + + R +L ++ VY LI K
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKL----STVVYNALISGFCK 232
Query: 90 CKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQ 149
+ EKA L M GC D +Y LL+ Y + +L+RA ++ EM + G Q D
Sbjct: 233 AGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS-GIQLDAY 291
Query: 150 TYSILIKSCLEVFAFDKVQG-LLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVE 208
+Y+ L+K V DK ++ +M G + V+Y+TLI+ + +A + L E
Sbjct: 292 SYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASN-TRKAYRLFE 349
Query: 209 MLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGH 268
+ + +V T S ++AF G ++ D+ G+ P+ + +LD K
Sbjct: 350 EMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSG 409
Query: 269 DYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ K V M ++ + ++YN +I ++G + + LF M+ +
Sbjct: 410 NVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGK 459
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y LI + KA LF+ M +G V++ +YT+L+ A+ R G A LL++M
Sbjct: 328 YSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQM- 386
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
+ G PD Y+ ++ + DK G+ +DM H I P+ ++YN+LI ++ R
Sbjct: 387 TELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRV 446
Query: 200 SEMESTLVEMLADRDCQPDVWTM 222
+E L E + ++C PD T
Sbjct: 447 TE-AIKLFEDMKGKECCPDELTF 468
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 109/234 (46%), Gaps = 9/234 (3%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y LI L + + A+E++ AM+ G D ++ AL+ + ++ A+ +
Sbjct: 147 PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEM 206
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+ E + + Y+ LI + +K + L S M+ G +P+ VTYN L++ Y
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYY 266
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP-- 252
E + EM+ Q D ++ N L+ + D +CY+ F ++P
Sbjct: 267 DNNMLKRAEGVMAEMVRS-GIQLDAYSYNQLLKRHCRVSHPD---KCYN-FMVKEMEPRG 321
Query: 253 --NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
+V +++ L++++ + + +K + E M++ +VTY +I AF + G+
Sbjct: 322 FCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGN 375
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 122/313 (38%), Gaps = 55/313 (17%)
Query: 44 VLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAM 103
V E+ E A+ W+ F L+ P + Y + I L K K+ + L M
Sbjct: 55 VRESRFELAEAIYWDMKPMGFSLI-------PFT--YSRFISGLCKVKKFDLIDALLSDM 105
Query: 104 VDEGCVVDC---ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLE 160
G + D Y LL ++ G + F + + G +PDV +Y+ILI
Sbjct: 106 ETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQ----RGREPDVVSYTILINGLFR 161
Query: 161 VFAFDKVQGLLSDMAIHGIKPN------------------------------------TV 184
+ + M G+ P+ TV
Sbjct: 162 AGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTV 221
Query: 185 TYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDK 244
YN LI + KA R + E+ L ++ C+PD+ T N L + + + E +
Sbjct: 222 VYNALISGFCKAGRIEKAEA-LKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 245 FQTAGIQPNVQTFNILLDSYGK-GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
+GIQ + ++N LL + + H K + +++ M+ + +V+Y+ +I+ F +A
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRAS 339
Query: 304 DLQQMEYLFRLMR 316
+ ++ LF MR
Sbjct: 340 NTRKAYRLFEEMR 352
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 117/255 (45%), Gaps = 7/255 (2%)
Query: 61 LKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLS 120
LKV E + ++ + + Y KLI + K E + + M G D + TAL+
Sbjct: 368 LKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVH 427
Query: 121 AYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIK 180
YS+SG ERA E +KS G +PD + Y +I + + L+ +M +K
Sbjct: 428 MYSKSGNFERATEAFENLKSY-GLRPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELK 486
Query: 181 PNTVTYNTLIDAY---GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
+ Y L+ AY G A + + S++ + +D + +++ + A+G GQ+D
Sbjct: 487 ASEEVYMALLRAYAQMGDANGAAGISSSM-QYASDGPLSFEAYSL--FVEAYGKAGQVDK 543
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ +D+ + G +P+ + L+ +Y + K ++ ++K ++TY +++D
Sbjct: 544 AKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVD 603
Query: 298 AFGKAGDLQQMEYLF 312
G +++ E L
Sbjct: 604 WMANLGLIEEAEQLL 618
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 112/274 (40%), Gaps = 25/274 (9%)
Query: 56 RW-ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVV---- 110
+W E A K+ E E W P + GKCK + LE Q D ++
Sbjct: 291 KWVEMADKIHEAEEEADWREPKP--------VTGKCKLVMEKLESLQEGDDPSGLLAEWA 342
Query: 111 -----DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFD 165
+ + AL++ R G + E + + YS LI + +
Sbjct: 343 ELLEPNRVDWIALINQL-REGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIE 401
Query: 166 KVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNST 225
V+ +L M+ +GI P+ +T L+ Y K+ F E + E L +PD +
Sbjct: 402 DVERILKKMSQNGIFPDILTATALVHMYSKSGNF-ERATEAFENLKSYGLRPDEKIYEAM 460
Query: 226 LRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY---GKGHDYKKMSAVMEYMQK 282
+ + N G+ ER + Q ++ + + + LL +Y G + +S+ M+Y
Sbjct: 461 ILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASD 520
Query: 283 YHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
S+ Y++ ++A+GKAG + + + F MR
Sbjct: 521 GPLSFE--AYSLFVEAYGKAGQVDKAKSNFDEMR 552
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 96/193 (49%), Gaps = 8/193 (4%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQG---LL 171
+ L+ + ++G + AF ++EEMK + P+ TYS L+ CL FA + + L
Sbjct: 199 FNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLM-DCL--FAHSRSKEAVELF 255
Query: 172 SDM-AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
DM + GI P+ VT+N +I+ + +A E +++ + C P+V+ ++ + F
Sbjct: 256 EDMISKEGISPDPVTFNVMINGFCRAGEV-ERAKKILDFMKKNGCNPNVYNYSALMNGFC 314
Query: 231 NLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
+G+I ++ +D+ + G++ + + L++ + + + + ++ M+ +
Sbjct: 315 KVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTL 374
Query: 291 TYNIVIDAFGKAG 303
TYN+++ G
Sbjct: 375 TYNVILRGLSSEG 387
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 136/319 (42%), Gaps = 13/319 (4%)
Query: 6 IASQKAVSVILRREATKAIID---KRRKKGPINSKKLLPRTVLEALHERVTALRWESALK 62
I+ + AVS++ R + ++D K ++ N +L+ L +R + L
Sbjct: 54 ISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNL------VRHKKFLA 107
Query: 63 VFELLREQLW--YRPNSGVYIKLIVMLGKCKQPEKALELFQAM-VDEGCVVDCESYTALL 119
V +L + + R +++ L+ + +K +E+F + V + + L
Sbjct: 108 VDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCL 167
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+ SG + + LL K G QP+ ++IL+K + + ++ +M GI
Sbjct: 168 NLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGI 227
Query: 180 K-PNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTM 238
PN++TY+TL+D R E +M++ PD T N + F G+++
Sbjct: 228 SYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERA 287
Query: 239 ERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
++ D + G PNV ++ L++ + K ++ + ++K V Y +++
Sbjct: 288 KKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 299 FGKAGDLQQMEYLFRLMRS 317
F + G+ + L M++
Sbjct: 348 FCRNGETDEAMKLLGEMKA 366
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 93/211 (44%), Gaps = 7/211 (3%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCK--QPEKALELFQAMVDEGCVVDCESY 115
E A K+ + +++ N VY +M G CK + ++A + F + G +D Y
Sbjct: 285 ERAKKILDFMKKN---GCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGY 341
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
T L++ + R+G + A LL EMK++ C+ D TY+++++ ++ +L
Sbjct: 342 TTLMNCFCRNGETDEAMKLLGEMKASR-CRADTLTYNVILRGLSSEGRSEEALQMLDQWG 400
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G+ N +Y +++A E + ++++R P T N + G
Sbjct: 401 SEGVHLNKGSYRIILNALCCNGEL-EKAVKFLSVMSERGIWPHHATWNELVVRLCESGYT 459
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
+ R F G+ P +++ +++S K
Sbjct: 460 EIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 161 VFAF------DKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
+FAF DKV +L +M KP+ +TYN+++D G+A +E+ L M D
Sbjct: 184 IFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCS 243
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
++ T N+ L + D Y++ GI+P++ ++ ++DS G+ + K+
Sbjct: 244 VSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESL 303
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+ + M++ ++ Y +ID K+GD Q
Sbjct: 304 RLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQS 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 101/223 (45%), Gaps = 3/223 (1%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP-DVQTYSIL 154
A +L Q++ ++ + + LL+A ++ + + E+ PG +P Y L
Sbjct: 89 AYDLLQSLQEKNICLPISVFKNLLAAAGELNDMKLSCRVFREVLILPGKEPLSSDCYLNL 148
Query: 155 IKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
++ + + LL +++ + + N +I A+ + ++ ++ L EM + +
Sbjct: 149 ARAFINTDDCTYLTSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEM-KEWE 207
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKF-QTAGIQPNVQTFNILLDSYGKGHDYKKM 273
C+PDV T NS L G G ++ + + + N+ T+N +L+ K +
Sbjct: 208 CKPDVITYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMC 267
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ M + +++Y VID+ G++G++++ LF M+
Sbjct: 268 LVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMK 310
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 74/167 (44%), Gaps = 1/167 (0%)
Query: 82 KLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKST 141
++I + +Q +K L + + M + C D +Y ++L R+GL+ +L MK
Sbjct: 182 RIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLSTMKED 241
Query: 142 PGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
++ TY+ ++ + FD + ++M GI+P+ ++Y +ID+ G++ E
Sbjct: 242 CSVSVNIITYNTVLNGMRKACRFDMCLVIYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKE 301
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA 248
EM R +P V+ + + G + + D+ +
Sbjct: 302 SLRLFDEM-KQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELKNT 347
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 114/276 (41%), Gaps = 19/276 (6%)
Query: 42 RTVLE---ALHERVTALRWESALKVFELLREQLWYRPNS---GVYIKLIVMLGKCKQPEK 95
R V+E A + V+ L L E L E P G +++I++ GK ++
Sbjct: 65 RLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQGRREGFIVRIIMLYGKAGMTKQ 124
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
AL+ F M GC +S+ A L S + L + L + S G D +++I I
Sbjct: 125 ALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIAI 184
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
KS E+ D + +M G+ P+ VTY TLI A K +R + + L ++ + C
Sbjct: 185 KSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHER-CVIGNGLWNLMVLKGC 243
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ------TFNILLDSYGKGHD 269
+P++ T N ++ N R +D + P +Q T+N+++ +
Sbjct: 244 KPNLTTFNVRIQFLVN------RRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARF 297
Query: 270 YKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
V M Y + Y +I KAG+
Sbjct: 298 PDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNF 333
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 111/268 (41%), Gaps = 40/268 (14%)
Query: 67 LREQLW---YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYS 123
L +++W P +Y KLI + KA E F+ +V + V D +YT +++ Y
Sbjct: 587 LLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYC 646
Query: 124 RSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVF------AFD------------ 165
R ++A++L E+MK +PDV TYS+L+ S E+ AFD
Sbjct: 647 RLNEPKQAYALFEDMKRR-DVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMI 705
Query: 166 ----------KVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
KV L DM I P+ VTY L+ ++ E L + D
Sbjct: 706 NRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK--------NKPERNLSREMKAFDV 757
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
+PDV+ + +G + +R +D+ +G+ P+ + L+ K K+
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKM 817
Query: 276 VMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
+ + M + +V Y +I + G
Sbjct: 818 IFDRMIESGVKPDVVPYTALIAGCCRNG 845
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 104/263 (39%), Gaps = 39/263 (14%)
Query: 87 LGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
LGK + E+A+ELF+ M +G D +YT L+ G AF L+ EM T G P
Sbjct: 406 LGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGT-GKTP 464
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
D+ Y++L + L M G+KP VT+N +I+ A + E+
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEA-F 523
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQID-------------------------TMERC 241
E L + + D S ++ F G +D E+
Sbjct: 524 YESLEHKSRENDA----SMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKD 579
Query: 242 Y--------DKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
Y D+ G++P + L+ ++ + ++ +K E + + TY
Sbjct: 580 YISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYT 639
Query: 294 IVIDAFGKAGDLQQMEYLFRLMR 316
I+I+ + + + +Q LF M+
Sbjct: 640 IMINTYCRLNEPKQAYALFEDMK 662
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 89/204 (43%), Gaps = 11/204 (5%)
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
E+ +++ + +G L+ AF ++ P +++ C E K Q LL
Sbjct: 533 ENDASMVKGFCAAGCLDHAFERFIRLEFP---LPKSVYFTLFTSLCAEKDYISKAQDLLD 589
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
M G++P Y LI A+ + + E+L + PD++T + + L
Sbjct: 590 RMWKLGVEPEKSMYGKLIGAWCRVNNVRKARE-FFEILVTKKIVPDLFTYTIMINTYCRL 648
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
+ ++ + ++P+V T+++LL+S D K+ M+ + +V Y
Sbjct: 649 NEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-DPELDMKR------EMEAFDVIPDVVYY 701
Query: 293 NIVIDAFGKAGDLQQMEYLFRLMR 316
I+I+ + DL+++ LF+ M+
Sbjct: 702 TIMINRYCHLNDLKKVYALFKDMK 725
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+P+ Y LI K +A +F M++ G D YTAL++ + G L+ A
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKM 817
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
+ + M + G +PDV Y+ LI C K L+ +M GIKP + + + A
Sbjct: 818 IFDRMIES-GVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAK 876
Query: 194 GKAK 197
KAK
Sbjct: 877 LKAK 880
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 119/305 (39%), Gaps = 39/305 (12%)
Query: 47 ALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDE 106
A+ A + + AL F+ ++ + +PN GVY ++ K +KAL +Q M E
Sbjct: 163 AIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKE 222
Query: 107 GCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCL------- 159
D ++ L++ Y RS + A L EMK GC+P+V +++ LI+ L
Sbjct: 223 RAKPDVCTFNILINGYCRSSKFDLALDLFREMKEK-GCEPNVVSFNTLIRGFLSSGKIEE 281
Query: 160 --------------------EVFA--------FDKVQGLLSDMAIHGIKPNTVTYNTLID 191
E+ D GL+ D+ + P+ Y +L++
Sbjct: 282 GVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVE 341
Query: 192 AY-GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
G+ K ME ++E L + P + + G+ + +K AGI
Sbjct: 342 KLCGENKAVRAME--MMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGI 399
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEY 310
P+ TFN+LL + + Y TY++++ F K G ++ E
Sbjct: 400 LPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEV 459
Query: 311 LFRLM 315
L M
Sbjct: 460 LVNEM 464
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 62/122 (50%), Gaps = 1/122 (0%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
+ + + AY R+ ++ A + MK +P+V Y+ ++ ++ DK M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
KP+ T+N LI+ Y ++ +F ++ L + ++ C+P+V + N+ +R F + G+
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKF-DLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGK 278
Query: 235 ID 236
I+
Sbjct: 279 IE 280
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 10/176 (5%)
Query: 63 VFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEG---CVVDCESYTALL 119
V +LL +++ P+ Y L+ L + +A+E+ + + +G C + C T L+
Sbjct: 321 VLDLLNKRVL--PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIAC---TTLV 375
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
+SG E+A +E+M + G PD T+++L++ L + G
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNA-GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGY 434
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
+P+ TY+ L+ + K R E E + EML D+D PD++T N + G+
Sbjct: 435 EPDETTYHVLVSGFTKEGRRKEGEVLVNEML-DKDMLPDIFTYNRLMDGLSCTGKF 489
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 4/257 (1%)
Query: 61 LKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPE--KALELFQAMVDEGCVVDCESYTAL 118
+KV LL E N +V C Q AL + MV+ GC SY ++
Sbjct: 459 VKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSV 518
Query: 119 LSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHG 178
+ + ++E SL+ ++ PDV TY I++ + D ++ M G
Sbjct: 519 IKCLFQENIIEDLASLVNIIQELDFV-PDVDTYLIVVNELCKKNDRDAAFAIIDAMEELG 577
Query: 179 IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTM 238
++P Y+++I + GK R E E T +ML + QPD + + G+ID
Sbjct: 578 LRPTVAIYSSIIGSLGKQGRVVEAEETFAKML-ESGIQPDEIAYMIMINTYARNGRIDEA 636
Query: 239 ERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
++ ++P+ T+ +L+ + K +K ++ M + S +V Y +I
Sbjct: 637 NELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGH 696
Query: 299 FGKAGDLQQMEYLFRLM 315
F K GD + LF LM
Sbjct: 697 FLKKGDFKFSFTLFGLM 713
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 116/282 (41%), Gaps = 41/282 (14%)
Query: 69 EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL 128
E+L RP +Y +I LGK + +A E F M++ G D +Y +++ Y+R+G +
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRI 633
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
+ A L+EE+ +P TY++LI +++ +K L M G+ PN V Y
Sbjct: 634 DEANELVEEVVKH-FLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTA 692
Query: 189 LIDAYGKAKRFSEMESTLVEMLADRDCQPD----------VW------------------ 220
LI + K F + TL ++ + D + D +W
Sbjct: 693 LIGHFLKKGDF-KFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKE 751
Query: 221 ----------TMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDY 270
+ S + GN G K + + I PN+ N ++ Y
Sbjct: 752 KLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKS-IIPNLYLHNTIITGYCAAGRL 810
Query: 271 KKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+ +E MQK +VTY I++ + +AGD++ LF
Sbjct: 811 DEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF 852
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 101/240 (42%), Gaps = 8/240 (3%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
N Y LI K +KA++L M+D G V D +Y LL + L+ A +L
Sbjct: 377 NVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVIL 436
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+ + GC + L +EV KV+ LL ++A V + A
Sbjct: 437 QSILDN-GCGINPPVIDDL--GNIEV----KVESLLGEIARKDANLAAVGLAVVTTALCS 489
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
+ + S +E + + C P ++ NS ++ I+ + + Q P+V
Sbjct: 490 QRNYIAALSR-IEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVD 548
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
T+ I+++ K +D A+++ M++ T+ Y+ +I + GK G + + E F M
Sbjct: 549 TYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKM 608
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 113/248 (45%), Gaps = 26/248 (10%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
Y P + + +L++ GKC E A ++ M ++ V S+TA++S YS++G A
Sbjct: 83 YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVV----SWTAMISRYSQTGHSSEAL 138
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI------KPNTVTY 186
++ EM + G +P+ T++ ++ SC+ + GL IHG+ +
Sbjct: 139 TVFAEMMRSDG-KPNEFTFATVLTSCI------RASGLGLGKQIHGLIVKWNYDSHIFVG 191
Query: 187 NTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQ 246
++L+D Y KA + E + E L +R DV + + + + LG + + +
Sbjct: 192 SSLLDMYAKAGQIKEARE-IFECLPER----DVVSCTAIIAGYAQLGLDEEALEMFHRLH 246
Query: 247 TAGIQPNVQTFNILLDSYGKGH--DYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGD 304
+ G+ PN T+ LL + D+ K + ++ + + V N +ID + K G+
Sbjct: 247 SEGMSPNYVTYASLLTALSGLALLDHGKQAHC--HVLRRELPFYAVLQNSLIDMYSKCGN 304
Query: 305 LQQMEYLF 312
L LF
Sbjct: 305 LSYARRLF 312
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 6/192 (3%)
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y L++ +S++G +E A +M+ + G +++ LI+ + FD G+ +
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRS-GFAVTPYSFNPLIEGYCKQGLFDDAWGVTDE 333
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M GI P T TYN I A R + L M A PDV + N+ + + +G
Sbjct: 334 MLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA-----PDVVSYNTLMHGYIKMG 388
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
+ +D + I P++ T+N L+D + + + + E M ++TY
Sbjct: 389 KFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYT 448
Query: 294 IVIDAFGKAGDL 305
++ F K G+L
Sbjct: 449 TLVKGFVKNGNL 460
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 43/284 (15%)
Query: 30 KKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGK 89
+ G I+ + T+++ L E + E A ++ E + QL + P+ Y L+ K
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCE---SGNLEGAQRLKEEMTTQLIF-PDVITYTTLVKGFVK 456
Query: 90 CKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP------- 142
A E++ M+ +G D +YT R G ++AF L EEM +T
Sbjct: 457 NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLT 516
Query: 143 ----------------------------GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
G PD TY+ +I+ LE F + L +M
Sbjct: 517 IYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM 576
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
+ P+ +TY LI + KA R + EM R +P+V T N+ L G
Sbjct: 577 LRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEM-KKRGVRPNVMTHNALLYGMCKAGN 635
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVME 278
ID R K + GI PN ++ +L+ K D++K V++
Sbjct: 636 IDEAYRYLCKMEEEGIPPNKYSYTMLI---SKNCDFEKWEEVVK 676
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 101/217 (46%), Gaps = 6/217 (2%)
Query: 95 KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSIL 154
KA +++ M++ G + ++ +L + ++G LER + EMK +V TY+IL
Sbjct: 221 KASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEV-TYNIL 279
Query: 155 IKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRD 214
I + ++ + DM G ++N LI+ Y K F + EML +
Sbjct: 280 INGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEML-NAG 338
Query: 215 CQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMS 274
P T N + A + G+ID + ++ P+V ++N L+ Y K + + S
Sbjct: 339 IYPTTSTYNIYICALCDFGRIDDAR----ELLSSMAAPDVVSYNTLMHGYIKMGKFVEAS 394
Query: 275 AVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
+ + ++ +IVTYN +ID ++G+L+ + L
Sbjct: 395 LLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 85/191 (44%), Gaps = 5/191 (2%)
Query: 121 AYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIK 180
Y++ + E+ E+M G P V+ +I++K + +K + M HGI
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRK-GFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIM 235
Query: 181 PNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMER 240
P +T+NT++D+ KA ++ +EM R+ + T N + F G+++ R
Sbjct: 236 PTVITFNTMLDSCFKAGDLERVDKIWLEM-KRRNIEFSEVTYNILINGFSKNGKMEEARR 294
Query: 241 CYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA-- 298
+ + +G +FN L++ Y K + V + M T TYNI I A
Sbjct: 295 FHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALC 354
Query: 299 -FGKAGDLQQM 308
FG+ D +++
Sbjct: 355 DFGRIDDAREL 365
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 101/247 (40%), Gaps = 17/247 (6%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P + Y I L + + A EL +M D SY L+ Y + G A L
Sbjct: 341 PTTSTYNIYICALCDFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMGKFVEASLL 396
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+++++ P + TY+ LI E + Q L +M I P+ +TY TL+ +
Sbjct: 397 FDDLRAG-DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV 455
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN--LGQIDTMERCYDKF-QTAGIQ 251
K S EML + +PD + T RA G LG D R +++ T
Sbjct: 456 KNGNLSMATEVYDEMLR-KGIKPDGYAY--TTRAVGELRLGDSDKAFRLHEEMVATDHHA 512
Query: 252 PNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTI---VTYNIVIDAFGKAGDLQQM 308
P++ +N+ +D K + K +E+ +K + VTY VI + + G +
Sbjct: 513 PDLTIYNVRIDGLCKVGNLVK---AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMA 569
Query: 309 EYLFRLM 315
L+ M
Sbjct: 570 RNLYDEM 576
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 112/256 (43%), Gaps = 17/256 (6%)
Query: 57 WESALKVFELLREQL----WYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDC 112
W+SA VF L++ W SG+ I Q E A+ELF+ + EG D
Sbjct: 282 WKSAYIVFTELKDTRNLISWNSVISGMMIN--------GQHETAVELFEKLDSEGLKPDS 333
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
++ +L+S +S+ G + AF E M S P ++ + L+ +C +++ + +
Sbjct: 334 ATWNSLISGFSQLGKVIEAFKFFERMLSVV-MVPSLKCLTSLLSACSDIWTLKNGKEIHG 392
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
+ + + +LID Y K S + + + P W N + +G
Sbjct: 393 HVIKAAAERDIFVLTSLIDMYMKCG-LSSWARRIFDRFEPKPKDPVFW--NVMISGYGKH 449
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQ-KYHYSWTIVT 291
G+ ++ ++ + ++P++ TF +L + + +K S + MQ +Y Y +
Sbjct: 450 GECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEH 509
Query: 292 YNIVIDAFGKAGDLQQ 307
+ID G++G L++
Sbjct: 510 IGCMIDLLGRSGRLRE 525
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 18/214 (8%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
+L Q M G + Y LL A ++G + RA SL+ EMK +P+ T++ILI
Sbjct: 201 GFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK-----EPNDVTFNILI 255
Query: 156 KSCLEVFAFDKVQGLLSDMAIH------GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEM 209
A+ Q L+ M + G P+ VT +++ R SE L E
Sbjct: 256 S------AYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVL-ER 308
Query: 210 LADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHD 269
+ + + DV N+ ++ + LG++ +R + + + G PNV+T+N+L+ Y
Sbjct: 309 VESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGM 368
Query: 270 YKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
M+ W T+N +I G
Sbjct: 369 LDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGG 402
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 105/243 (43%), Gaps = 9/243 (3%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
PN+ VY L+ L K + +A L M + V ++ L+SAY L ++ L
Sbjct: 215 PNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDV----TFNILISAYCNEQKLIQSMVL 270
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
LE+ S G PDV T + +++ + +L + G K + V NTL+ Y
Sbjct: 271 LEKCFSL-GFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYC 329
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+ + +EM + P+V T N + + ++G +D+ ++ +T I+ N
Sbjct: 330 ALGKMRVAQRFFIEM-ERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNF 388
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYH--YSWTIVTYNIVIDAFGKAGDLQQ-MEYL 311
TFN L+ G ++E MQ + I YN VI F K + +E+L
Sbjct: 389 ATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFL 448
Query: 312 FRL 314
++
Sbjct: 449 LKM 451
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 92/218 (42%), Gaps = 6/218 (2%)
Query: 91 KQPEKALELFQ-AMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQ 149
K ALE F+ A G + +Y AL + + LL+EM + G PD
Sbjct: 54 KSASGALETFRWASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDA 113
Query: 150 TYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEM 209
+ +I+ +V ++ ++ GIKP+ +N+++D K E +M
Sbjct: 114 IFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKM 173
Query: 210 LADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHD 269
+A DV+T ++ +I + +T+G+ PN +N LL + K
Sbjct: 174 MAS-GIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGK 232
Query: 270 YKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+ ++M M++ + VT+NI+I A+ L Q
Sbjct: 233 VGRARSLMSEMKEPND----VTFNILISAYCNEQKLIQ 266
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 2/145 (1%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
L + P+ K++ +L + +ALE+ + + +G VD + L+ Y G +
Sbjct: 276 SLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMR 335
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A EM+ G P+V+TY++LI +V D +DM I+ N T+NTL
Sbjct: 336 VAQRFFIEMERK-GYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTL 394
Query: 190 IDAYGKAKRFSEMESTLVEMLADRD 214
I R ++ ++EM+ D D
Sbjct: 395 IRGLSIGGR-TDDGLKILEMMQDSD 418
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 103/243 (42%), Gaps = 11/243 (4%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCV-VDCESYTALLSAYSRSGLLERAFS 133
P++ Y L+ L KCK E M D+ V D S+T L+ S L A
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L+ ++ + G +PD Y+ ++K + + G+ M G++P+ +TYNTLI
Sbjct: 252 LVSKLGNA-GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGL 310
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWT----MNSTLRAFGNLGQIDTMERCYDKFQTAG 249
KA R E L M+ D +PD T MN R +LG + +E + + G
Sbjct: 311 SKAGRVEEARMYLKTMV-DAGYEPDTATYTSLMNGMCRKGESLGALSLLE----EMEARG 365
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQME 309
PN T+N LL K K + E M+ Y ++ + K+G + +
Sbjct: 366 CAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAY 425
Query: 310 YLF 312
+F
Sbjct: 426 EVF 428
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 99/224 (44%), Gaps = 1/224 (0%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
++A +L + + ++ D +Y LL + L + ++EM+ +PD+ +++I
Sbjct: 176 DEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTI 235
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
LI + + L+S + G KP+ YNT++ + + SE +M +
Sbjct: 236 LIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKM-KEE 294
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
+PD T N+ + G+++ AG +P+ T+ L++ + +
Sbjct: 295 GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGA 354
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+++E M+ + TYN ++ KA + + L+ +M+S
Sbjct: 355 LSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKS 398
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 2/149 (1%)
Query: 53 TALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDC 112
T + A+ V++ ++E+ P+ Y LI L K + E+A + MVD G D
Sbjct: 277 TLSKGSEAVGVYKKMKEE-GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDT 335
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
+YT+L++ R G A SLLEEM++ GC P+ TY+ L+ + DK L
Sbjct: 336 ATYTSLMNGMCRKGESLGALSLLEEMEAR-GCAPNDCTYNTLLHGLCKARLMDKGMELYE 394
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
M G+K + Y TL+ + K+ + +E
Sbjct: 395 MMKSSGVKLESNGYATLVRSLVKSGKVAE 423
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%)
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G +PD T I ++S E D+ + L+ ++ P+T TYN L+ K K +
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
+ EM D D +PD+ + + N + K AG +P+ +N ++
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 263 SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ + V + M++ +TYN +I KAG +++ + M
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 93/214 (43%), Gaps = 4/214 (1%)
Query: 67 LREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSG 126
+R+ +P+ + LI + K +A+ L + + G DC Y ++ +
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 127 LLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTY 186
A + ++MK G +PD TY+ LI + ++ + L M G +P+T TY
Sbjct: 280 KGSEAVGVYKKMKEE-GVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 187 NTLIDAYGKAKRFSEMES-TLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKF 245
+L++ G ++ + + +L+E + R C P+ T N+ L +D Y+
Sbjct: 339 TSLMN--GMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMM 396
Query: 246 QTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEY 279
+++G++ + L+ S K + V +Y
Sbjct: 397 KSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDY 430
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 113/251 (45%), Gaps = 14/251 (5%)
Query: 61 LKVFE-LLREQLWYRPNSGVYIKLIVMLGKCKQPEKALE----LFQAMVDEGCVVDCESY 115
+K+F+ +L+ Q +RP + LI++ C+ P+ ++ + MV+ G D +
Sbjct: 105 VKLFQHILKSQPNFRPGRSTF--LILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTT 162
Query: 116 TALLSAYSRSGLLERAFSLLEEM--KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+ + +G ++ A L++E+ K +P PD TY+ L+K + V + +
Sbjct: 163 DIAVRSLCETGRVDEAKDLMKELTEKHSP---PDTYTYNFLLKHLCKCKDLHVVYEFVDE 219
Query: 174 MAIH-GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
M +KP+ V++ LID +K E LV L + +PD + N+ ++ F L
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLRE-AMYLVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
+ Y K + G++P+ T+N L+ K ++ ++ M Y TY
Sbjct: 279 SKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 293 NIVIDAFGKAG 303
+++ + G
Sbjct: 339 TSLMNGMCRKG 349
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 72/173 (41%)
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G +PD T I ++S E D+ + L+ ++ P+T TYN L+ K K +
Sbjct: 154 GLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVV 213
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
+ EM D D +PD+ + + N + K AG +P+ +N ++
Sbjct: 214 YEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMK 273
Query: 263 SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ + V + M++ +TYN +I KAG +++ + M
Sbjct: 274 GFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM 326
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 17/229 (7%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
+I M KC+ + A +LF+ VD V+ +T L+S +++ AF L +M
Sbjct: 252 IIDMYVKCRLLDNARKLFETSVDRNVVM----WTTLISGFAKCERAVEAFDLFRQMLRES 307
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
P+ T + ++ SC + + + + M +GI+ + V + + ID Y + +M
Sbjct: 308 -ILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNI-QM 365
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
T+ +M+ +R+ V + +S + AFG G + C+ K ++ + PN TF LL
Sbjct: 366 ARTVFDMMPERN----VISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLS 421
Query: 263 SYGKGHDYKKMSAVMEYMQKYHYSWTIVT----YNIVIDAFGKAGDLQQ 307
+ + K+ E M + + +V Y ++D G+AG++ +
Sbjct: 422 ACSHSGNVKEGWKQFESMTR---DYGVVPEEEHYACMVDLLGRAGEIGE 467
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 87/186 (46%), Gaps = 18/186 (9%)
Query: 9 QKAVSVILRREATKAIIDKRRKKGPINSKKLLPRTVLEALHERVTALRWESALKVFELLR 68
++A+S + E ++++D+ ++ LL R L+ ++V +++
Sbjct: 836 EEALSELASFEGERSLLDQYTYGSIVHG--LLQRGDLQKALDKVNSMK------------ 881
Query: 69 EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL 128
++ +P VY LIV K KQ EK LE Q M E C +YTA++ Y G +
Sbjct: 882 -EIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKV 940
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
E A++ M+ G PD +TYS I + + LLS+M GI P+T+ + T
Sbjct: 941 EEAWNAFRNMEER-GTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRT 999
Query: 189 LIDAYG 194
+ YG
Sbjct: 1000 VF--YG 1003
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/258 (19%), Positives = 115/258 (44%), Gaps = 5/258 (1%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A++ F ++++ + G+Y ++ + G+ + + EL M GC D ++T L+
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILI 231
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGI 179
S Y ++ + + + E+M+ + G + D Y+I+I+S D +M GI
Sbjct: 232 SVYGKAKKIGKGLLVFEKMRKS-GFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGI 290
Query: 180 KPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQ-PDVWTMNSTLRAFGNLGQIDTM 238
TY L+D K+++ ++S +M+ R C+ + L++F G+I
Sbjct: 291 TFGLRTYKMLLDCIAKSEKVDVVQSIADDMV--RICEISEHDAFGYLLKSFCVSGKIKEA 348
Query: 239 ERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
+ + + + + F IL+ + + +++ M++ + V Y I+I
Sbjct: 349 LELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISG 407
Query: 299 FGKAGDLQQMEYLFRLMR 316
+ + D+ + F +++
Sbjct: 408 YLRQNDVSKALEQFEVIK 425
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 100/241 (41%), Gaps = 43/241 (17%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVML--GKCKQPEKALELFQAMVDEGCVVD------ 111
A++ F+ +++ + P+S + LI +L K + E+A F+ M+ G V D
Sbjct: 732 AIRTFKEMKD-MGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQD 790
Query: 112 -----CE-----------------------SYTALLSAYSRSGLLERAFSLLEEMKSTPG 143
CE +Y+ + A R G LE A S E+ S G
Sbjct: 791 YLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGKLEEALS---ELASFEG 847
Query: 144 CQP--DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
+ D TY ++ L+ K ++ M G KP Y +LI + K K+ +
Sbjct: 848 ERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEK 907
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
+ T +M + C+P V T + + + +LG+++ + + G P+ +T++ +
Sbjct: 908 VLETCQKMEGE-SCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFI 966
Query: 262 D 262
+
Sbjct: 967 N 967
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 94/212 (44%), Gaps = 6/212 (2%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P + + +IV L K + E+ EL M+ GC+ D +Y ++ + ++ A+
Sbjct: 339 PTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
L+EM S G PD+ TY+ ++ E D+ L M P+ TYN LI +
Sbjct: 399 LDEM-SNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFF 457
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY--DKFQTAGIQP 252
+ +T EM RDC DV T + + + + E C+ ++ G++
Sbjct: 458 EMDDPDGAFNTWTEM-DKRDCVQDVETYCAMINGLFDCHR--AKEACFLLEEVVNKGLKL 514
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYH 284
+ F+ L + + K + V E+M+K++
Sbjct: 515 PYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFY 546
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 6/186 (3%)
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
++ LL A + GL++ +LL M+ +PD T+++L V K LL +
Sbjct: 236 AFNMLLDALCKCGLVKEGEALLRRMRHR--VKPDANTFNVLFFGWCRVRDPKKAMKLLEE 293
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M G KP TY ID + +A E + L + + + T + L
Sbjct: 294 MIEAGHKPENFTYCAAIDTFCQAGMVDE-AADLFDFMITKGSAVSAPTAKTFALMIVALA 352
Query: 234 QIDTMERCYD---KFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIV 290
+ D E C++ + + G P+V T+ +++ + ++ M Y IV
Sbjct: 353 KNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIV 412
Query: 291 TYNIVI 296
TYN +
Sbjct: 413 TYNCFL 418
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 120/307 (39%), Gaps = 57/307 (18%)
Query: 55 LRWES----ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVD----- 105
LR++S A+ F+ ++ L RPN G Y L+ +L K+ A++ +++
Sbjct: 87 LRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKK 146
Query: 106 -------------EGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP---------- 142
+ C D + L+ Y + GL+E F + E+ +
Sbjct: 147 EEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNH 206
Query: 143 ------------------------GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHG 178
G P+ T++IL F +V L M G
Sbjct: 207 LLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEG 266
Query: 179 IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTM 238
+P+ VTYNTL+ +Y + R E L +++ R PD+ T S ++ G++
Sbjct: 267 FEPDLVTYNTLVSSYCRRGRLKEA-FYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREA 325
Query: 239 ERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
+ + + GI+P+ ++N L+ +Y K ++ ++ M T ++++
Sbjct: 326 HQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEG 385
Query: 299 FGKAGDL 305
F + G L
Sbjct: 386 FVREGRL 392
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 1/134 (0%)
Query: 182 NTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERC 241
+ V ++ L+ Y K E E+L D V T N L L ++ +
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVL-DSGFSVSVVTCNHLLNGLLKLDLMEDCWQV 223
Query: 242 YDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGK 301
Y GI PN TFNIL + + +++++ +E M++ + +VTYN ++ ++ +
Sbjct: 224 YSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCR 283
Query: 302 AGDLQQMEYLFRLM 315
G L++ YL+++M
Sbjct: 284 RGRLKEAFYLYKIM 297
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 18/250 (7%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y +I + K + AL++ M G + ++++L+SA + +GL+E+A L EEM
Sbjct: 377 YCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEML 436
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
++ GC+P+ Q ++IL+ +C+E +D+ L + G N Y I + G+
Sbjct: 437 AS-GCEPNSQCFNILLHACVEACQYDRAFRLFQ--SWKGSSVNESLYADDIVSKGRTSSP 493
Query: 200 SEMESTLVEMLADRDC-------------QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQ 246
+ +++ L +R+ +P T N L+A G + D+ +
Sbjct: 494 NILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKACGT--DYYRGKELMDEMK 551
Query: 247 TAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
+ G+ PN T++ L+D G D + ++ M +V Y I + L+
Sbjct: 552 SLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLK 611
Query: 307 QMEYLFRLMR 316
LF MR
Sbjct: 612 LAFSLFEEMR 621
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 104/227 (45%), Gaps = 30/227 (13%)
Query: 110 VDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQG 169
+D +Y ++ ++ + + + A + ++MKS G P+ T+S LI +C ++
Sbjct: 372 LDAFTYCTIIKVFADAKMWKWALKVKDDMKSV-GVTPNTHTWSSLISACANAGLVEQANH 430
Query: 170 LLSDMAIHGIKPNTVTYNTLIDA------YGKAKRF--SEMESTLVEML-AD------RD 214
L +M G +PN+ +N L+ A Y +A R S S++ E L AD R
Sbjct: 431 LFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRT 490
Query: 215 CQPDVWTMN---STLRAFGNLGQIDTMER-CYDKFQTAGIQPNVQTFNILLDSYGKGHDY 270
P++ N S + N I +R C+ +P T+NILL + G DY
Sbjct: 491 SSPNILKNNGPGSLVNRNSNSPYIQASKRFCF--------KPTTATYNILLKACGT--DY 540
Query: 271 KKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
+ +M+ M+ S +T++ +ID G +GD++ + R M S
Sbjct: 541 YRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHS 587
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Query: 69 EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLL 128
++ ++P + Y L+ G + EL M G + +++ L+ SG +
Sbjct: 518 KRFCFKPTTATYNILLKACGT--DYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDV 575
Query: 129 ERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNT 188
E A +L M S G +PDV Y+ IK C E L +M + IKPN VTYNT
Sbjct: 576 EGAVRILRTMHSA-GTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNT 634
Query: 189 LIDAYGKAKRFSEMESTL 206
L+ A K E+ L
Sbjct: 635 LLKARSKYGSLLEVRQCL 652
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 99/226 (43%), Gaps = 25/226 (11%)
Query: 59 SALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTAL 118
S + +E + Q+ PN + +I + G C K+ +++ ++ E + +L
Sbjct: 250 SVMTAYEACK-QILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSL 308
Query: 119 LSAYSRS-GLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD---M 174
++ S G + + ++ + T D+ +Y+IL+K+C D Q + + M
Sbjct: 309 MNVNSHDLGYTLKVYKNMQILDVTA----DMTSYNILLKTCCLAGRVDLAQDIYKEAKRM 364
Query: 175 AIHGI-KPNTVTYNTLIDAYGKAKRF-------SEMESTLVEMLADRDCQPDVWTMNSTL 226
G+ K + TY T+I + AK + +M+S V P+ T +S +
Sbjct: 365 ESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGV--------TPNTHTWSSLI 416
Query: 227 RAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKK 272
A N G ++ +++ +G +PN Q FNILL + + Y +
Sbjct: 417 SACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDR 462
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 5/221 (2%)
Query: 87 LGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
LG+ ++ EK L + MV+ G DC SY+ L+ R+G + + + + +K G P
Sbjct: 268 LGEVEEMEKVL---KEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHK-GNVP 323
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
D Y+ +I + + FD+ M +PN TY+ L+ K ++ S+
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
EML+ R P + S L+ + G Y K + AG + + + +LL +
Sbjct: 384 EEMLS-RGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSR 442
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+ V + MQ+ Y + Y ++D G L+
Sbjct: 443 FGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLEN 483
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 88/194 (45%), Gaps = 5/194 (2%)
Query: 78 GVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEE 137
G Y ++ LG+ K +++ + MV EG D E T + ++ R + RA L EE
Sbjct: 152 GSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEE 211
Query: 138 MKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKP-NTVTYNTLIDAYGKA 196
+S G + ++++ L++ E + + + A G P ++ +YN +I + K
Sbjct: 212 SESF-GVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMISGWSKL 268
Query: 197 KRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQT 256
EME L EM+ + PD + + + G G+I+ +D + G P+
Sbjct: 269 GEVEEMEKVLKEMV-ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANV 327
Query: 257 FNILLDSYGKGHDY 270
+N ++ ++ D+
Sbjct: 328 YNAMICNFISARDF 341
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 104/241 (43%), Gaps = 9/241 (3%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
V + + L +Q ++ F+ +V + D + ALL + + A ++ +
Sbjct: 149 VVLGRVAKLCSVRQTVESFWKFKRLVPD--FFDTACFNALLRTLCQEKSMTDARNVYHSL 206
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
K QPD+QT++IL+ + +M G+KP+ VTYN+LID Y K +
Sbjct: 207 KHQ--FQPDLQTFNILLSGWKSSEE---AEAFFEEMKGKGLKPDVVTYNSLIDVYCKDRE 261
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFN 258
E L++ + + + PDV T + + G +GQ D + + G P+V +N
Sbjct: 262 I-EKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYN 320
Query: 259 ILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL-QQMEYLFRLMRS 317
+ ++ +++ M K S TYN+ A DL + E R++ +
Sbjct: 321 AAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGN 380
Query: 318 E 318
E
Sbjct: 381 E 381
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 2/177 (1%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+P+ Y LI + K ++ EKA +L M +E D +YT ++ G ++A
Sbjct: 243 KPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKARE 302
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
+L+EMK GC PDV Y+ I++ L+ +M G+ PN TYN
Sbjct: 303 VLKEMKEY-GCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVL 361
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
A V ML + +C P+ + ++ F ++D R ++ G
Sbjct: 362 SLANDLGRSWELYVRMLGN-ECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGF 417
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 97 LELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIK 156
+ELF+ M G V + +YT L+ ++G + A + +EM S G PD+ TY+IL+
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS-DGVPPDIMTYNILLD 59
Query: 157 SCLEVFAFDK--VQGLLSD-------MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLV 207
+ +K V G + D +++ G+KPN VTY T+I + K K F E TL
Sbjct: 60 GLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCK-KGFKEEAYTLF 118
Query: 208 EMLADRDCQPDVWTMNSTLRA 228
+ + PD T N+ +RA
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRA 139
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 15/175 (8%)
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
L EM S G + TY+ LI+ + D Q + +M G+ P+ +TYN L+D
Sbjct: 3 LFREM-SQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 194 GKAKRFSEMESTLVE-----------MLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCY 242
K + +E LV L+ + +P+V T + + F G + +
Sbjct: 62 CKNGK---LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLF 118
Query: 243 DKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
K + G P+ T+N L+ ++ + D + +++ M+ ++ TY +V D
Sbjct: 119 RKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 111/257 (43%), Gaps = 6/257 (2%)
Query: 66 LLRE--QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYS 123
L+RE ++ PN Y LI L +KAL LF M G + + ++ A
Sbjct: 178 LVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALC 237
Query: 124 RSGLL-ERAFSLLEE-MKSTPGCQP-DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIK 180
+ G++ LLEE + S+ P D+ +IL+ SC + + + +M+ +
Sbjct: 238 QKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVP 297
Query: 181 PNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMER 240
++V YN +I + + +M+ R PDV+T N+ + A G+ D
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVK-RGVNPDVFTYNTLISALCKEGKFDEACD 356
Query: 241 CYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFG 300
+ Q G+ P+ ++ +++ D + + + M K ++ +N+VID +G
Sbjct: 357 LHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYG 416
Query: 301 KAGDLQQMEYLFRLMRS 317
+ GD + LM S
Sbjct: 417 RYGDTSSALSVLNLMLS 433
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 87/204 (42%), Gaps = 6/204 (2%)
Query: 116 TALLSAYSRSGLLERAFSLLEEM--KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
T L+ + ++G + +A + +EM K+ P D Y+++I+ G + D
Sbjct: 269 TILMDSCFKNGNVVQALEVWKEMSQKNVPA---DSVVYNVIIRGLCSSGNMVAAYGFMCD 325
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M G+ P+ TYNTLI A K +F E L + + PD + ++ G
Sbjct: 326 MVKRGVNPDVFTYNTLISALCKEGKFDE-ACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
++ + + P V +N+++D YG+ D +V+ M Y + T N
Sbjct: 385 DVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNN 444
Query: 294 IVIDAFGKAGDLQQMEYLFRLMRS 317
+I + K G L ++ MRS
Sbjct: 445 ALIHGYVKGGRLIDAWWVKNEMRS 468
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 94/227 (41%), Gaps = 4/227 (1%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
+ AL L + M+ G + ++ LL+ ++G +E+A L+ EM+ G P+ +Y+
Sbjct: 138 DAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREM-GPSPNCVSYNT 196
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
LIK V DK L + M +GI+PN VT N ++ A + L+E + D
Sbjct: 197 LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDS 256
Query: 214 ---DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDY 270
+ D+ + + G + + + + + +N+++ +
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNM 316
Query: 271 KKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
M M K + + TYN +I A K G + L M++
Sbjct: 317 VAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQN 363
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 63/152 (41%), Gaps = 2/152 (1%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
+ ++ Y R G A S+L M S G +P+V T + LI ++ + ++M
Sbjct: 408 WNVVIDGYGRYGDTSSALSVLNLMLSY-GVKPNVYTNNALIHGYVKGGRLIDAWWVKNEM 466
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
I P+T TYN L+ A EML R CQPD+ T +R G+
Sbjct: 467 RSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLR-RGCQPDIITYTELVRGLCWKGR 525
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
+ E + Q GI + F IL Y +
Sbjct: 526 LKKAESLLSRIQATGITIDHVPFLILAKKYTR 557
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 126/299 (42%), Gaps = 41/299 (13%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEG-CVVDCES- 114
+ S ++VF+ L++ + P+ G Y +++ K + K +ELFQ + + ES
Sbjct: 189 YSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESG 248
Query: 115 --YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKS--------------- 157
YT + S+ ++SG A +LEEMK G + YS+LI++
Sbjct: 249 SIYTIVCSSLAKSGRAFEALEVLEEMKDK-GIPESSELYSMLIRAFAEAREVVITEKLFK 307
Query: 158 -------------CLEVFAFDKVQG-------LLSDMAIHGIKPNTVTYNTLIDAYGKAK 197
CL+V +G +++ M +K +++ + K +
Sbjct: 308 EAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQR 367
Query: 198 RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF 257
F+E + E +C+ T + A+ L + + E +D+ G V +
Sbjct: 368 GFAEA-VKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAY 426
Query: 258 NILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ ++D YGK +M M++ I YN +ID G+A DL++ E +++ M+
Sbjct: 427 SNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMK 485
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 103/238 (43%), Gaps = 41/238 (17%)
Query: 81 IKLIVMLGKCKQPEKALELFQAMVD-EGCVVDCESYTALLSAYSRSGLLERAFSLLE-EM 138
+K+++M + E LE+ AM E V DC A+++ +S+ A + E M
Sbjct: 322 LKVVLMYVREGNMETTLEVVAAMRKAELKVTDC-ILCAIVNGFSKQRGFAEAVKVYEWAM 380
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
K C+ TY+I I + + ++K + L +M G V Y+ ++D YGK +R
Sbjct: 381 KEE--CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRR 438
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFN 258
S+ V ++A K + G +PN+ +N
Sbjct: 439 LSDA----VRLMA--------------------------------KMKQRGCKPNIWIYN 462
Query: 259 ILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
L+D +G+ D ++ + + M++ V+Y +I A+ ++ +L++ L++ R
Sbjct: 463 SLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFR 520
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+PN +Y LI M G+ +A ++++ M + D SYT+++SAY+RS LER
Sbjct: 455 KPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVE 514
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
L +E + G + D I++ + D++ LL DM + G + + Y++ ++A
Sbjct: 515 LYQEFRMNRG-KIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNA 572
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 8/172 (4%)
Query: 95 KALELFQAMVDEG---CVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTY 151
KA LF MV +G CVV +Y+ ++ Y ++ L A L+ +MK GC+P++ Y
Sbjct: 406 KAEMLFDEMVKKGFDKCVV---AYSNIMDMYGKTRRLSDAVRLMAKMKQR-GCKPNIWIY 461
Query: 152 SILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLA 211
+ LI + + + +M + P+ V+Y ++I AY ++K E
Sbjct: 462 NSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRM 521
Query: 212 DRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS 263
+R + D + F +ID + R + G + + + ++ L++
Sbjct: 522 NRG-KIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNA 572
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 108/206 (52%), Gaps = 13/206 (6%)
Query: 56 RWESALKVFE-LLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCES 114
+W+ ALK+F+ +L++ + +PN LI LGK + +++ + G D +
Sbjct: 299 KWDLALKIFQSMLKKGM--KPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYT 356
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
+ ALL+A ++ E L + ++S C + Y+ + SC ++ ++K LL +M
Sbjct: 357 WNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEM 416
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRA--FGNL 232
G+ +T +YN +I A K+++ S++ + E +A RDC+P+ +T S +R+ +G+L
Sbjct: 417 EGSGLTVSTSSYNLVISACEKSRK-SKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSL 475
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFN 258
D +E K ++P+V +N
Sbjct: 476 W--DEVEDILKK-----VEPDVSLYN 494
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 97/213 (45%), Gaps = 1/213 (0%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
Y L+ + +C + E AL+++ MV+ + ++ A++SA ++ + A + + M
Sbjct: 252 YSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSML 311
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
G +P++ + LI S + V + S + G KP+ T+N L+ A KA R+
Sbjct: 312 K-KGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRY 370
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
++ + ++ C + + N+ + + LG + + + + +G+ + ++N+
Sbjct: 371 EDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNL 430
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
++ + K K V E+M + TY
Sbjct: 431 VISACEKSRKSKVALLVYEHMAQRDCKPNTFTY 463
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 122/293 (41%), Gaps = 9/293 (3%)
Query: 32 GPINSKKLLPRTVLEALHERVTAL----RWESALKVFELLREQLWYRPNSGVYIKLIVML 87
G N L E L +R+ L + SAL++F+ +R L +PN+ + L
Sbjct: 94 GDRNRIHFLEERNEETLSKRLRKLSRLDKVRSALELFDSMR-FLGLQPNAHACNSFLSCL 152
Query: 88 GKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP- 146
+ +KA +F+ M + V +Y+ +L A + E A + E++ P +
Sbjct: 153 LRNGDIQKAFTVFEFMRKKENVTG-HTYSLMLKAVAEVKGCESALRMFRELEREPKRRSC 211
Query: 147 -DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMEST 205
DV Y+ I C + + + + M G +TY+ L+ + + R SE+
Sbjct: 212 FDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGR-SELALD 270
Query: 206 LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYG 265
+ + + + M + + A + D + + G++PN+ N L++S G
Sbjct: 271 VYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLG 330
Query: 266 KGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
K + V ++ + T+N ++ A KA + + LF ++RSE
Sbjct: 331 KAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSE 383
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 3/152 (1%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+ Y LI PEKA+E+ + M +G V ++T +LS+ + G LE A +L
Sbjct: 172 PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNL 231
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
EM GC+ D Y++ I S + + ++V+ L+ +M+ G+KP+T++YN L+ AY
Sbjct: 232 WNEMVKK-GCELDNAAYNVRIMSA-QKESPERVKELIEEMSSMGLKPDTISYNYLMTAYC 289
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTL 226
+ E + + E L +C P+ T + +
Sbjct: 290 ERGMLDEAKK-VYEGLEGNNCAPNAATFRTLI 320
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 88/210 (41%), Gaps = 12/210 (5%)
Query: 57 WESALKVFELLREQLWYRPNSGVYIKLIVMLGKC---KQPEKALELFQAMVD--EGCVVD 111
+ A++ FE + + + P S V +L C K +K +LF + + D
Sbjct: 118 FNHAMRTFEQMDQ--YGTPRSAVSFN--ALLNACLHSKNFDKVPQLFDEIPQRYNKIIPD 173
Query: 112 CESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLL 171
SY L+ +Y SG E+A ++ +M+ G + ++ ++ S + + L
Sbjct: 174 KISYGILIKSYCDSGTPEKAIEIMRQMQGK-GMEVTTIAFTTILSSLYKKGELEVADNLW 232
Query: 172 SDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
++M G + + YN I K E L+E ++ +PD + N + A+
Sbjct: 233 NEMVKKGCELDNAAYNVRI--MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCE 290
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
G +D ++ Y+ + PN TF L+
Sbjct: 291 RGMLDEAKKVYEGLEGNNCAPNAATFRTLI 320
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 108/244 (44%), Gaps = 25/244 (10%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LI + KC PE AL++F +M E V ++ +++S YSR+ L E + L M S
Sbjct: 517 LIDLYSKCGLPEMALKVFTSMSTENMV----AWNSMISCYSRNNLPELSIDLFNLMLSQ- 571
Query: 143 GCQPD-VQTYSILIKSCLEVFAFDKVQGLLSDMAIH------GIKPNTVTYNTLIDAYGK 195
G PD V S+L+ A LL ++H GI +T N LID Y K
Sbjct: 572 GIFPDSVSITSVLV-------AISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVK 624
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
FS+ + + + + + T N + +G+ G T +D+ + AG P+
Sbjct: 625 CG-FSKYAENIFKKMQHK----SLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDV 679
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYM-QKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRL 314
TF L+ + ++ + E+M Q Y + Y ++D G+AG L++ +
Sbjct: 680 TFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKA 739
Query: 315 MRSE 318
M E
Sbjct: 740 MPIE 743
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 89/177 (50%), Gaps = 2/177 (1%)
Query: 88 GKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPD 147
+ ++ ++A+ F M + G ++ + +L S+S + A + ++MK +PD
Sbjct: 173 ARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKR-FEPD 231
Query: 148 VQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLV 207
+++Y+IL++ + +V + +M G +P+ V Y +I+A+ KAK++ E
Sbjct: 232 IKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFN 291
Query: 208 EMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY 264
EM R+C+P S + G+ +++ +++ +++G T+N L+ +Y
Sbjct: 292 EM-EQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAY 347
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 119/267 (44%), Gaps = 7/267 (2%)
Query: 34 INSKKLLPRTVLEALHER-VTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQ 92
+ +KKLL + + R A + + A+ F + E+ ++ S + +++ L K +
Sbjct: 154 MKAKKLLSKETFALISRRYARARKVKEAIGAFHKM-EEFGFKMESSDFNRMLDTLSKSRN 212
Query: 93 PEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYS 152
A ++F M + D +SYT LL + + L R + EMK G +PDV Y
Sbjct: 213 VGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKD-EGFEPDVVAYG 271
Query: 153 ILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLAD 212
I+I + + +++ ++M KP+ + +LI+ G K+ ++ E
Sbjct: 272 IIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDA-LEFFERSKS 330
Query: 213 RDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKK 272
+ T N+ + A+ +++ + D+ + G+ PN +T++I+L + K+
Sbjct: 331 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 390
Query: 273 MSAVMEYMQKYHYSWTIVTYNIVIDAF 299
V + M T+ TY I++ F
Sbjct: 391 AYEVYQTMS---CEPTVSTYEIMVRMF 414
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Query: 54 ALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCE 113
A ++E A++ F + EQ +P+ ++ LI LG K+ ALE F+ G ++
Sbjct: 280 AKKYEEAIRFFNEM-EQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAP 338
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y AL+ AY S +E A+ ++EM+ G P+ +TY I++ + + + +
Sbjct: 339 TYNALVGAYCWSQRMEDAYKTVDEMR-LKGVGPNARTYDIILHHLIRMQRSKEAYEVYQT 397
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
M+ +P TY ++ + +R +M + + + + P + +S + A +
Sbjct: 398 MS---CEPTVSTYEIMVRMFCNKERL-DMAIKIWDEMKGKGVLPGMHMFSSLITALCHEN 453
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNIL 260
++D +++ GI+P F+ L
Sbjct: 454 KLDEACEYFNEMLDVGIRPPGHMFSRL 480
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 2/141 (1%)
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G K T YN LI++ GK K+F + S + +M A + + + + S R + ++
Sbjct: 123 GFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALIS--RRYARARKVKE 180
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+ K + G + FN +LD+ K + V + M+K + I +Y I+++
Sbjct: 181 AIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLE 240
Query: 298 AFGKAGDLQQMEYLFRLMRSE 318
+G+ +L +++ + R M+ E
Sbjct: 241 GWGQELNLLRVDEVNREMKDE 261
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/200 (22%), Positives = 90/200 (45%), Gaps = 8/200 (4%)
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
+L S +G+L A S+ + ++ G + Y+ LI+S ++ F + L+ DM
Sbjct: 100 VLKKLSNAGVL--ALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAK 157
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTL--VEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
+ T+ + Y +A++ E +E + D M TL N+G
Sbjct: 158 KLLSKE-TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGD- 215
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
++ +DK + +P+++++ ILL+ +G+ + ++ V M+ + +V Y I+
Sbjct: 216 --AQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGII 273
Query: 296 IDAFGKAGDLQQMEYLFRLM 315
I+A KA ++ F M
Sbjct: 274 INAHCKAKKYEEAIRFFNEM 293
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 38/242 (15%)
Query: 105 DEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAF 164
DE V D S+ +L+S YS G E A + E+K++ PD T S ++ + +
Sbjct: 165 DEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNS-WIVPDSFTVSSVLPAFGNLLVV 223
Query: 165 DKVQGL------------------LSDMAIHGIKP-------------NTVTYNTLIDAY 193
+ QGL L M + +P ++V+YNT+I Y
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY 283
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
K + E +E L +PD+ T++S LRA G+L + + Y+ AG
Sbjct: 284 LKLEMVEESVRMFLENL--DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLE 341
Query: 254 VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFR 313
NIL+D Y K D V M+ V++N +I + ++GDL + LF+
Sbjct: 342 STVRNILIDVYAKCGDMITARDVFNSME----CKDTVSWNSIISGYIQSGDLMEAMKLFK 397
Query: 314 LM 315
+M
Sbjct: 398 MM 399
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 25/250 (10%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LI M KC E + +F+ M D ++T ++ AY G E+A +M+ +
Sbjct: 550 LIEMYSKCGCLENSSRVFERMSRR----DVVTWTGMIYAYGMYGEGEKALETFADMEKS- 604
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH-GIKPNTVTYNTLIDAYGKAKRFSE 201
G PD + +I +C D+ M H I P Y ++D ++++ S+
Sbjct: 605 GIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISK 664
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
E E + +PD S LRA G ++T ER + + P+ ++IL
Sbjct: 665 AE----EFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIE--LNPDDPGYSILA 718
Query: 262 -DSYGKGHDYKKMSAVMEYMQKYH------YSWTIVTYNIVIDAFGKAGDLQ------QM 308
++Y + K+S + + ++ H YSW V N+ + + G Q +
Sbjct: 719 SNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSL 778
Query: 309 EYLFRLMRSE 318
E L+ LM E
Sbjct: 779 EILYSLMAKE 788
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 105/243 (43%), Gaps = 5/243 (2%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
V+ L+ + + A E+ + EG V + + ++R + + +EM
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEM 209
Query: 139 KSTPGCQPDVQTYSILIKS-CLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAK 197
S G +V T++++I S C E F+ + + M G+ PN V++N +ID K
Sbjct: 210 DSL-GYVENVNTFNLVIYSFCKESKLFEALS-VFYRMLKCGVWPNVVSFNMMIDGACKTG 267
Query: 198 --RFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
RF+ + M++ P+ T NS + F G++D ER +G+ N +
Sbjct: 268 DMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNER 327
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
T+ L+D+YG+ + + + M V YN ++ GD++ + R M
Sbjct: 328 TYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDM 387
Query: 316 RSE 318
S+
Sbjct: 388 NSK 390
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 115/280 (41%), Gaps = 49/280 (17%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
N Y L+ G+ ++AL L M +G VV+ Y +++ G +E A S+L
Sbjct: 325 NERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVL 384
Query: 136 EEMKSTPGCQPDVQTYSILIK-------------------------------SCLEVFAF 164
+M S Q D T +I+++ + + F
Sbjct: 385 RDMNS-KNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 165 DK----VQGLLSDMAIHGIKPNTVTYNTLIDAY---GKAKRFSEMESTLVEMLADRDCQP 217
DK +L M + G+ + +++ TLID Y GK +R E+ +++M +
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKM----NKTS 499
Query: 218 DVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM 277
++ NS + G E + + ++ T+N LL+ K + ++ ++
Sbjct: 500 NLVIYNSIVNGLSKRGMAGAAEAVVNAMEI----KDIVTYNTLLNESLKTGNVEEADDIL 555
Query: 278 EYMQKY--HYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
MQK S ++VT+NI+I+ K G ++ + + + M
Sbjct: 556 SKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFM 595
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 103/244 (42%), Gaps = 11/244 (4%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
Y N V L+ M GKC + A F+ M + + D S+ ALL+ +R G E+A
Sbjct: 426 YDTNVIVANALLDMYGKCGTLQSANIWFRQMSE---LRDEVSWNALLTGVARVGRSEQAL 482
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
S E M+ +P T + L+ C + A + + + + G K + V ++D
Sbjct: 483 SFFEGMQVEA--KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDM 540
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
Y K + F E A RD +W NS +R G+ + + + G++P
Sbjct: 541 YSKCRCFDYAIEVFKEA-ATRDLI--LW--NSIIRGCCRNGRSKEVFELFMLLENEGVKP 595
Query: 253 NVQTF-NILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
+ TF IL +GH KYH S + Y+ +I+ + K G L Q+E
Sbjct: 596 DHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEF 655
Query: 312 FRLM 315
LM
Sbjct: 656 LLLM 659
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 103/223 (46%), Gaps = 11/223 (4%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E + F + E+L P+S Y KL+ + AL++ + M + G ++ + +
Sbjct: 354 EDTILKFNKMHEELDVMPSSTSYEKLVKYSCDSNEVVTALDVVEKMGEAGLMISADILHS 413
Query: 118 LLSAYSRSGLLERAFSLLEEMKS---TPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
LL A +LE F L+ + S T +P+ + + +I+ C + F+ +L ++
Sbjct: 414 LLHAIDE--VLE--FDLVRRIHSIMCTKSVKPNTENFRSIIRLCTRIKDFEGAYNMLGNL 469
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
++PN+ +N ++ Y + K S +V+ + + +PD T + N Q
Sbjct: 470 KNFNLEPNSSMFNCILAGYFREKNVSSA-LMVVKQMKEAGVKPDSITFGYLI---NNCTQ 525
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVM 277
D + + Y++ + AG+Q + + L+D+Y ++K V+
Sbjct: 526 EDAITKYYEEMKQAGVQATKRIYMSLIDAYAASGKFEKAKQVL 568
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+PN+ + +I + + K E A + + + + + +L+ Y R + A
Sbjct: 440 KPNTENFRSIIRLCTRIKDFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFREKNVSSALM 499
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
++++MK G +PD T+ LI +C + D + +M G++ Y +LIDAY
Sbjct: 500 VVKQMKEA-GVKPDSITFGYLINNCTQE---DAITKYYEEMKQAGVQATKRIYMSLIDAY 555
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMN 223
+ +F + + LV+ PDV +N
Sbjct: 556 AASGKFEKAKQVLVD--------PDVPAIN 577
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 103/227 (45%), Gaps = 15/227 (6%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESY-------TALLSAYSRSGLLERAFSLL 135
LI ++GK K+ ALE+++ ++DEG + SY LLSA S+ G+ LL
Sbjct: 387 LIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLL 446
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+M+ G +P + ++ ++ +C + + M +G KP ++Y L+ A K
Sbjct: 447 NKMEDK-GLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEK 505
Query: 196 AKRFSEMESTLVEMLADRDCQPDVW---TMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
K + E M+ +P+++ TM S L +DT+ + + + GI+P
Sbjct: 506 GKLYDEAFRVWNHMI-KVGIEPNLYAYTTMASVLTGQQKFNLLDTLLK---EMASKGIEP 561
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
+V TFN ++ + M+ + +TY ++I+A
Sbjct: 562 SVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLIEAL 608
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
+P + ++V K + A+++F+AMVD G SY ALLSA + L + AF
Sbjct: 455 KPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFR 514
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAY 193
+ M G +P++ Y+ + F+ + LL +MA GI+P+ VT+N +I
Sbjct: 515 VWNHMIKV-GIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGC 573
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
+ S + + + +P+ T + A N + + K Q G++ +
Sbjct: 574 AR-NGLSGVAYEWFHRMKSENVEPNEITYEMLIEALANDAKPRLAYELHVKAQNEGLKLS 632
Query: 254 VQTFNILLDS 263
+ ++ ++ S
Sbjct: 633 SKPYDAVVKS 642
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 3 NSKIASQKAVSVILRREATKAIIDKRRKKGPINSKKLLPRTVLE-------ALH----ER 51
N KI ++ +S ++R ++ D K K PRTV+ LH ER
Sbjct: 96 NPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFER 155
Query: 52 VTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVD 111
V L E + + +++ Y G+ IK GK PEKA+E+ + M +G V
Sbjct: 156 VPQLFDEFPQRYNNITPDKISY----GMLIKSYCDSGK---PEKAMEIMRDMEVKGVEVT 208
Query: 112 CESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI-LIKSCLEVFAFDKVQGL 170
++T +L + ++GL++ A SL EM + GC D Y++ L+ + E + ++V+ L
Sbjct: 209 IIAFTTILGSLYKNGLVDEAESLWIEMVNK-GCDLDNTVYNVRLMNAAKE--SPERVKEL 265
Query: 171 LSDMAIHGIKPNTVTYNTLIDAY 193
+ +M+ G+KP+TV+YN L+ AY
Sbjct: 266 MEEMSSVGLKPDTVSYNYLMTAY 288
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 3/183 (1%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM-KST 141
LI G+ + A+++F+ M G S+ ALL+A S L ER L +E +
Sbjct: 108 LIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRY 167
Query: 142 PGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
PD +Y +LIKS + +K ++ DM + G++ + + T++ + K E
Sbjct: 168 NNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDE 227
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
ES +EM+ ++ C D N L + ++ ++ + G++P+ ++N L+
Sbjct: 228 AESLWIEMV-NKGCDLDNTVYNVRLMNAAKESP-ERVKELMEEMSSVGLKPDTVSYNYLM 285
Query: 262 DSY 264
+Y
Sbjct: 286 TAY 288
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 110/265 (41%), Gaps = 14/265 (5%)
Query: 52 VTALRWES----ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEG 107
V ALR +S AL +F +Q Y+ N Y +I K+ L + ++
Sbjct: 79 VIALRAQSDPDLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGA 138
Query: 108 CVVDCESYTALLS-AYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFA--- 163
C + Y ++ R L RAF + +M + +PD++TY++L+ S L+ F
Sbjct: 139 CEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLN 198
Query: 164 -----FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPD 218
V+ L M +G+ P+T N +I AY K E EM A +P+
Sbjct: 199 VCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEM-ALYGSEPN 257
Query: 219 VWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVME 278
+T + ++ G++ Y + Q G+ PN + +L+ S + V+
Sbjct: 258 AYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVY 317
Query: 279 YMQKYHYSWTIVTYNIVIDAFGKAG 303
M S ++TYN V+ + G
Sbjct: 318 DMLANSLSPDMLTYNTVLTELCRGG 342
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 84/205 (40%), Gaps = 16/205 (7%)
Query: 109 VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQ 168
VV S T L+ G ++ A + MK C+PDV Y+ +I + V F K +
Sbjct: 162 VVTTASITCLMKCLGEEGFVKEALATFYRMKEY-HCKPDVYAYNTIINALCRVGNFKKAR 220
Query: 169 GLLSDMAIHGIK--PNTVTYNTLIDAYGK-----------AKRFSEMESTLVEMLADRDC 215
LL M + G + P+T TY LI +Y + +R E EML R
Sbjct: 221 FLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLF-RGF 279
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
PDV T N + +I ++ +T G PN T+N + Y ++ +
Sbjct: 280 VPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIE 339
Query: 276 VMEYMQKY-HYSWTIVTYNIVIDAF 299
+M M+K H TY +I A
Sbjct: 340 MMRTMKKLGHGVPGSSTYTPLIHAL 364
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 10/159 (6%)
Query: 57 WESALKVFELLREQLW--YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCES 114
WE+ + RE L+ + P+ Y LI K + +ALELF+ M +GCV + +
Sbjct: 265 WEAN----RMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVT 320
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
Y + + YS + +E A ++ MK P TY+ LI + +E + + L+ +M
Sbjct: 321 YNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEM 380
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
G+ P TY + DA + STL E L R
Sbjct: 381 VEAGLVPREYTYKLVCDALSS----EGLASTLDEELHKR 415
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 95 KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSIL 154
+A +F+ M+ G V D +Y L+ ++ + RA L E+MK T GC P+ TY+
Sbjct: 266 EANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMK-TKGCVPNQVTYNSF 324
Query: 155 IKSCLEVFAFDKVQGLLSDMAI-----HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEM 209
I+ ++++G + M HG+ P + TY LI A + +R +E +VEM
Sbjct: 325 IRY---YSVTNEIEGAIEMMRTMKKLGHGV-PGSSTYTPLIHALVETRRAAEARDLVVEM 380
Query: 210 LADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQ 251
+ + P +T A + G T++ K GIQ
Sbjct: 381 V-EAGLVPREYTYKLVCDALSSEGLASTLDEELHKRMREGIQ 421
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 15/262 (5%)
Query: 58 ESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYT 116
E AL++F ++LR L RPN ++ +I P L + + ++ ++C T
Sbjct: 246 EDALRLFNDMLR--LGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKT 303
Query: 117 ALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI 176
ALL +++ ++ A + E+ G Q ++ T++ +I + + L M
Sbjct: 304 ALLDMHAKCRDIQSARRIFNEL----GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMP- 358
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
K N V++N+LI Y + + +M+ D +PD TM S L A G++ ++
Sbjct: 359 ---KRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLE 415
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ D + I+ N + L+ Y +G + + V + M++ +V+YN +
Sbjct: 416 LGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERD----VVSYNTLF 471
Query: 297 DAFGKAGDLQQMEYLFRLMRSE 318
AF GD + L M+ E
Sbjct: 472 TAFAANGDGVETLNLLSKMKDE 493
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 32/259 (12%)
Query: 87 LGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
L K + E+A EL Q M D G V D +YT L+ Y G + A L++EM G P
Sbjct: 398 LSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGN-GMSP 456
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL 206
D+ TY++L+ ++V + M G KPN VT + +I+ A++ E E
Sbjct: 457 DLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFF 516
Query: 207 VEMLADRDCQPDVWTM--------------------------NSTLRAFGNLGQIDTMER 240
+ ++ C + + + ++ F +L +E+
Sbjct: 517 SSL--EQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEK 574
Query: 241 CYD---KFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVID 297
+D K ++P ++ ++ K ++ ++ + + M + + TY I+I
Sbjct: 575 AHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIH 634
Query: 298 AFGKAGDLQQMEYLFRLMR 316
+ + +LQ+ E LF M+
Sbjct: 635 TYCRLNELQKAESLFEDMK 653
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 122/271 (45%), Gaps = 23/271 (8%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E L+++E ++ + +PN+ +I L ++ ++A + F ++ ++ C E+ +
Sbjct: 475 EEVLEIYERMKAE-GPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL-EQKCP---ENKAS 529
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
+ Y +GL ++A+ ++ ++ + L C+E + +K +L M+ +
Sbjct: 530 FVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSL---CIEGY-LEKAHDVLKKMSAY 585
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
++P +I A+ K E + L + + +R PD++T + + L ++
Sbjct: 586 RVEPGRSMCGKMIGAFCKLNNVREAQ-VLFDTMVERGLIPDLFTYTIMIHTYCRLNELQK 644
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGK----GHDY---------KKMSAVMEYMQKYH 284
E ++ + GI+P+V T+ +LLD Y K H+ +K S V+
Sbjct: 645 AESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAG 704
Query: 285 YSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+V Y ++ID K +L+Q LF M
Sbjct: 705 IGLDVVCYTVLIDRQCKMNNLEQAAELFDRM 735
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 3/102 (2%)
Query: 95 KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSIL 154
+ALE F+ D +D Y A S+ G +E AF LL+EMK G PDV Y+ L
Sbjct: 371 EALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDR-GIVPDVINYTTL 429
Query: 155 IKS-CLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
I CL+ D + L+ +M +G+ P+ +TYN L+ +
Sbjct: 430 IDGYCLQGKVVDALD-LIDEMIGNGMSPDLITYNVLVSGLAR 470
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 82/188 (43%), Gaps = 6/188 (3%)
Query: 79 VYIKLIVMLGKCKQ---PEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
VY L V+ CK PE AL M+ +G V+C + +L Y + + A
Sbjct: 318 VYACLAVIDRYCKNMNLPE-ALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKF 376
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+E + D Y++ + ++ ++ LL +M GI P+ + Y TLID Y
Sbjct: 377 KEFRDM-NIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCL 435
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
+ + + EM+ + PD+ T N + G + + Y++ + G +PN
Sbjct: 436 QGKVVDALDLIDEMIGN-GMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAV 494
Query: 256 TFNILLDS 263
T +++++
Sbjct: 495 TNSVIIEG 502
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 24/234 (10%)
Query: 70 QLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLE 129
+L Y VYIKL L EKA ++ + M ++ A+ + +
Sbjct: 549 RLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVR 608
Query: 130 RAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTL 189
A L + M G PD+ TY+I+I + + K + L DM GIKP+ VTY L
Sbjct: 609 EAQVLFDTMVER-GLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL 667
Query: 190 IDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
+D Y K P+ + T G +G+ E +F AG
Sbjct: 668 LDRYLKL-------------------DPE---HHETCSVQGEVGKRKASE-VLREFSAAG 704
Query: 250 IQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
I +V + +L+D K ++ ++ + + + M +V Y +I ++ + G
Sbjct: 705 IGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKG 758
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 102/233 (43%), Gaps = 26/233 (11%)
Query: 82 KLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKST 141
KLI M GKC + A +F M+ + D ++TA+++ YS++G AF L EM+ T
Sbjct: 273 KLISMYGKCGDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKSSEAFKLFFEMEKT 328
Query: 142 PGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
G PD T S ++ +C V A + + + + + ++ N L+D YGK R E
Sbjct: 329 -GVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 387
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
M + T N+ + A+ + G +D+ + P+ TF +L
Sbjct: 388 ALRVFEAMPVKNEA-----TWNAMITAYAHQGHAKEALLLFDRMS---VPPSDITFIGVL 439
Query: 262 DS---YGKGHD----YKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+ G H + +MS++ + K I Y +ID +AG L +
Sbjct: 440 SACVHAGLVHQGCRYFHEMSSMFGLVPK------IEHYTNIIDLLSRAGMLDE 486
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 112/264 (42%), Gaps = 41/264 (15%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LI+M KC Q A +LF DE D S+ +++S YS +G + A L +M+
Sbjct: 173 LIMMYAKCGQVGYARKLF----DEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEE- 227
Query: 143 GCQPDVQTYSILIKSC-----------LEVFAFDKVQGLLSDM-----AIHG-------- 178
G +PD +T ++ +C LE A K GL + + +++G
Sbjct: 228 GFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSA 287
Query: 179 -------IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
IK + V + +I Y + + SE EM PD T+++ L A G+
Sbjct: 288 RRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM-EKTGVSPDAGTLSTVLSACGS 346
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVT 291
+G ++ ++ +Q N+ L+D YGK ++ V E M + + T
Sbjct: 347 VGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEA----T 402
Query: 292 YNIVIDAFGKAGDLQQMEYLFRLM 315
+N +I A+ G ++ LF M
Sbjct: 403 WNAMITAYAHQGHAKEALLLFDRM 426
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 19/228 (8%)
Query: 89 KCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDV 148
K + EKALE+F ++ V ++T +++ Y R+G E+A EM + G D
Sbjct: 283 KIGETEKALEVFHLAPEKNIV----TWTTMITGYGRNGDGEQALRFFVEMMKS-GVDSDH 337
Query: 149 QTYSILIKSC--LEVFAFDK-VQGLLSDMAIH-GIKPNTVTYNTLIDAYGKAKRFSEMES 204
Y ++ +C L + K + G L IH G + N L++ Y K E +
Sbjct: 338 FAYGAVLHACSGLALLGHGKMIHGCL----IHCGFQGYAYVGNALVNLYAKCGDIKEADR 393
Query: 205 TLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY 264
++ D+ + N+ L AFG G D + YD +GI+P+ TF LL +
Sbjct: 394 AFGDI-----ANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTC 448
Query: 265 GKGHDYKKMSAVMEYMQK-YHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
++ + E M K Y + +ID FG+ G L + + L
Sbjct: 449 SHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDL 496
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 8/158 (5%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LI M KC E+A +F A+ G D ++Y+A++ + GL + F L EM ++
Sbjct: 240 LIDMYAKCGSLERAKRVFNAL---GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSD 296
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH-GIKPNTVTYNTLIDAYGKAKRFSE 201
P+ T+ ++ +C+ ++ + M GI P+ Y ++D YG++ E
Sbjct: 297 NINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKE 356
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTME 239
ES + M +PDV S L LG I T E
Sbjct: 357 AESFIASM----PMEPDVLIWGSLLSGSRMLGDIKTCE 390
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/250 (20%), Positives = 113/250 (45%), Gaps = 28/250 (11%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM--KSTPGCQPDVQTY 151
E A++ M + G +Y L+ Y +G ER+ LL+ M + P+++T+
Sbjct: 132 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTF 191
Query: 152 SILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVE-ML 210
++L+++ + ++ ++ M G++P+TVTYNT+ Y + ES +VE M+
Sbjct: 192 NVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 251
Query: 211 ADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDY 270
+P+ T + + G++ R + + ++ N+ FN L++ + + D
Sbjct: 252 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 311
Query: 271 ------------------------KKMSA-VMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
+KM V+ M++ + ++TY+ V++A+ AG +
Sbjct: 312 DGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYM 371
Query: 306 QQMEYLFRLM 315
++ +F+ M
Sbjct: 372 EKAAQVFKEM 381
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 110/252 (43%), Gaps = 14/252 (5%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R A VF+ L E +RP+ Y L+ + KQ + + G +D +
Sbjct: 60 RPHEAQTVFKTLAET-GHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFF 118
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
A+++A+S SG +E A L +MK G P TY+ LIK ++ LL M
Sbjct: 119 NAVINAFSESGNMEDAVQALLKMKEL-GLNPTTSTYNTLIKGYGIAGKPERSSELLDLML 177
Query: 176 IHG---IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
G + PN T+N L+ A+ K K+ E +V+ + + +PD T N+ +
Sbjct: 178 EEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWE-VVKKMEECGVRPDTVTYNTIATCYVQK 236
Query: 233 GQI-----DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSW 287
G+ + +E+ K + +PN +T I++ Y + + + M++
Sbjct: 237 GETVRAESEVVEKMVMKEKA---KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEA 293
Query: 288 TIVTYNIVIDAF 299
+V +N +I+ F
Sbjct: 294 NLVVFNSLINGF 305
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 74/159 (46%), Gaps = 2/159 (1%)
Query: 145 QPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMES 204
+ DV TYS ++ + +K + +M G+KP+ Y+ L Y +AK + E
Sbjct: 352 KADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEE 411
Query: 205 TLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSY 264
L ++ + +P+V + + + + G +D R ++K G+ PN++TF L+ Y
Sbjct: 412 LLETLIVES--RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGY 469
Query: 265 GKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAG 303
+ K V++ M+ T+ ++ +A+ AG
Sbjct: 470 LEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAG 508
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/163 (20%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 148 VQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLV 207
V++ + L+ +E + Q + +A G +P+ ++Y TL+ A K++ + S++V
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSI-SSIV 103
Query: 208 EMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKG 267
+ + D N+ + AF G ++ + K + G+ P T+N L+ YG
Sbjct: 104 SEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIA 163
Query: 268 HDYKKMSAVMEYM---QKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
++ S +++ M I T+N+++ A+ K +++
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEE 206
>AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891360
REVERSE LENGTH=849
Length = 849
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 121/275 (44%), Gaps = 24/275 (8%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E+ +V+ + +Q WYR + G+ KL LGK ++ K E+F ++++G V ++
Sbjct: 219 ETGFRVYRWMTQQNWYRFDFGLTTKLAEYLGKERKFTKCREVFDDVLNQGRVPSESTFHI 278
Query: 118 LLSAY----SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
L+ AY S G LE A S+ M G +P + ++ L ++ + K G+L+D
Sbjct: 279 LVVAYLSSLSVEGCLEEACSVYNRMIQLGGYKPRLSLHNSLFRALV-----SKQGGILND 333
Query: 174 MAIHG--IKPNTVTYNTLI--DAYGKAKRFSEME--------STLVEMLADRDCQPDVWT 221
I N VT + D Y + ++L E + Q
Sbjct: 334 QLKQAEFIFHNVVTTGLEVQKDIYSGLIWLHSCQDEVDIGRINSLREEMKKAGFQESKEV 393
Query: 222 MNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQ 281
+ S LRA+ G ++ +ER + + Q F +++Y K D+ K + M+
Sbjct: 394 VVSLLRAYAKEGGVEEVERTWLELLDLDCGIPSQAFVYKIEAYSKVGDFAKAMEIFREME 453
Query: 282 KYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
K+ T+ Y+ +I+ K +QQ+E + LM+
Sbjct: 454 KHIGGATMSGYHKIIEVLCK---VQQVELVETLMK 485
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 16/187 (8%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMV-DEGCVVDCESYTALLSAYSRSGLLERAFSLLEE 137
VY KL+ +LG ++P++AL++F M+ D D +Y + ++GLL+ ++E
Sbjct: 257 VYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIER 316
Query: 138 MKSTPG--------------CQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNT 183
M+ P +PD+ Y+ ++ +C+ + V + ++ +G++PN
Sbjct: 317 MRQKPTKLTKNLRQKNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNG 376
Query: 184 VTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYD 243
TY ++ ++ +F + +M + + P T +RA G+I+
Sbjct: 377 ATYGLAMEVMLESGKFDRVHDFFRKMKSSGEA-PKAITYKVLVRALWREGKIEEAVEAVR 435
Query: 244 KFQTAGI 250
+ G+
Sbjct: 436 DMEQKGV 442
>AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17263011-17264022 FORWARD
LENGTH=257
Length = 257
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALL 119
A+K+FE++++Q WY+P+ +Y LIV L K K+ ++A+ L++ M E D ++YT ++
Sbjct: 126 AIKMFEVIQKQEWYQPDVFMYKDLIVSLAKSKRMDEAMALWEKMKKENLFPDSQTYTEVI 185
Query: 120 SAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCL 159
+ R G A ++ E+M +P P+ + +L+K L
Sbjct: 186 RGFLRDGCPADAMNVYEDMLKSPD-PPEELPFRVLLKGLL 224
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 34/259 (13%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
L + G ++P A +F M + D +TA+LSA+S++ L E A L M
Sbjct: 204 LAYLYGVNREPVDARRVFDEMPEP----DVICWTAVLSAFSKNDLYEEALGLFYAMHRGK 259
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G PD T+ ++ +C + + + + + +GI N V ++L+D YGK E
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREA 319
Query: 203 ESTLVEM----------LADRDCQ----------------PDVWTMNSTLRAFGNLGQID 236
M L CQ D++ + L+A L +
Sbjct: 320 RQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVR 379
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI 296
+ + ++ G NV + L+D YGK S V M + ++T+N ++
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRN----MITWNAML 435
Query: 297 DAFGKAGDLQQMEYLFRLM 315
A + G ++ F M
Sbjct: 436 SALAQNGRGEEAVSFFNDM 454
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 27/242 (11%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
L+ M GKC +A ++F M + V S++ALL Y ++G E+A + EM+
Sbjct: 306 LLDMYGKCGSVREARQVFNGMSKKNSV----SWSALLGGYCQNGEHEKAIEIFREME--- 358
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
+ D+ + ++K+C + A + + G N + + LID YGK+
Sbjct: 359 --EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSA 416
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
+M ++ T N+ L A G+ + ++ GI+P+ +F +L
Sbjct: 417 SRVYSKMSIR-----NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILT 471
Query: 263 SYG------KGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ G +G +Y + A + Y Y+ +ID G+AG ++ E L L R
Sbjct: 472 ACGHTGMVDEGRNYFVLMA-----KSYGIKPGTEHYSCMIDLLGRAGLFEEAENL--LER 524
Query: 317 SE 318
+E
Sbjct: 525 AE 526
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 105/222 (47%), Gaps = 16/222 (7%)
Query: 105 DEGC-VVDCESYTALLSAYSRSGLLERAFSLLEEMKS-TPGCQP--DVQTYSILIKS-CL 159
DEG +V +++ L+ Y+R+G++++A E +S P C+ +++ +L+ + C
Sbjct: 165 DEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCK 224
Query: 160 EVFA------FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADR 213
E +++ G + + P+ +N L++ + ++++ + E EM A
Sbjct: 225 EGHVREASMYLERIGGTMDSNWV----PSVRIFNILLNGWFRSRKLKQAEKLWEEMKA-M 279
Query: 214 DCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKM 273
+ +P V T + + + + ++ ++ + A ++ N FN ++D G+ +
Sbjct: 280 NVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEA 339
Query: 274 SAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ME TIVTYN ++ F KAGDL + ++M
Sbjct: 340 LGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMM 381
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 89/216 (41%), Gaps = 12/216 (5%)
Query: 112 CESYT------ALLSAYSRSGLLERAFSLLEEMKSTPGCQ--PDVQTYSILIKSCLEVFA 163
C+S T LL A + G + A LE + T P V+ ++IL+
Sbjct: 206 CKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRK 265
Query: 164 FDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEM-LADRDCQPDVWTM 222
+ + L +M +KP VTY TLI+ Y + +R L EM +A+ + +
Sbjct: 266 LKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEI--NFMVF 323
Query: 223 NSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQK 282
N + G G++ ++F P + T+N L+ ++ K D S +++ M
Sbjct: 324 NPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMT 383
Query: 283 YHYSWTIVTYNIVIDAFGKAGDLQQ-MEYLFRLMRS 317
T TYN F K ++ M F+L+ +
Sbjct: 384 RGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEA 419
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 107/238 (44%), Gaps = 6/238 (2%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
L+V++ K + E E+ G ++ ++ L+ A R G ++ A L+ M S
Sbjct: 150 LLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYM-SQD 208
Query: 143 GCQPDVQTYSILIKSCL---EVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
D + YS L+ S + FD V G L D+ P Y ++ + R
Sbjct: 209 SVIVDPRLYSRLLSSVCKHKDSSCFD-VIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRG 267
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
E+ S L +M DR +PD+ L+ ++ +D+ G+ P+V T+N+
Sbjct: 268 KEVVSVLNQMKCDR-VEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNV 326
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
++ K +D + +M M K +VTYNI+I A KAGDL + + L++ M +
Sbjct: 327 YINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMET 384
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 100/220 (45%), Gaps = 6/220 (2%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSR---SGLLERAFSLLEEMK 139
LI L + + + A EL + M + +VD Y+ LLS+ + S + LE+++
Sbjct: 185 LIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFD-VIGYLEDLR 243
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
T P ++ Y+++++ +E +V +L+ M ++P+ V Y ++ + +
Sbjct: 244 KT-RFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDY 302
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
+ + L + L PDV+T N + I+ + G +PNV T+NI
Sbjct: 303 PKADK-LFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNI 361
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAF 299
L+ + K D + + + M+ + T++I+I A+
Sbjct: 362 LIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 93/191 (48%), Gaps = 14/191 (7%)
Query: 73 YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
+ N+ V LI M KC + +F+ M V S+ ++++A++R G A
Sbjct: 388 FSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYV----SWNSMIAAFARHGHGLAAL 443
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA-IHGIKPNTVTYNTLID 191
L EEM +T +P T+ L+ +C V DK + LL++M +HGI+P T Y +ID
Sbjct: 444 KLYEEM-TTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIID 502
Query: 192 AYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDK-FQTAGI 250
G+A E +S + + DC+ +W + L A G + E ++ FQTA
Sbjct: 503 MLGRAGLLKEAKSFIDSLPLKPDCK--IW--QALLGACSFHGDTEVGEYAAEQLFQTA-- 556
Query: 251 QPNVQTFNILL 261
P+ + +IL+
Sbjct: 557 -PDSSSAHILI 566
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/293 (19%), Positives = 121/293 (41%), Gaps = 17/293 (5%)
Query: 38 KLLPRTVLEALHERVTALRWESALKVFELLR---EQLWYRPNSGVYIKLIVMLGKCKQPE 94
KL PR E L + +T E F L +Q + + Y I LG K +
Sbjct: 132 KLPPRFTPEELADAITL--EEDPFLCFHLFNWASQQPRFTHENCSYHIAIRKLGAAKMYQ 189
Query: 95 KALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPG--CQPDVQTYS 152
+ ++ ++ + + Y +++ ++++G L RA ++ M ++ C+P ++TY
Sbjct: 190 EMDDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYH 249
Query: 153 ILIKSCL---------EVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEME 203
IL K+ L V+ + V+ L M GI+P+ N L+ Y + ++
Sbjct: 250 ILFKALLGRGNNSYINHVY-METVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDAL 308
Query: 204 STLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS 263
+M DC+P+ +T + + G+ + + G PN +++N L+++
Sbjct: 309 RIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNA 368
Query: 264 YGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ + + M + ++Y ++D + G + L ++R
Sbjct: 369 FALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLR 421
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 106/233 (45%), Gaps = 11/233 (4%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
N + +KL+++ + A LF+++ + D + A++S Y + GL + +
Sbjct: 142 NEYLKVKLLILYALSGDLQTAGILFRSLK----IRDLIPWNAMISGYVQKGLEQEGLFIY 197
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+M+ PD T++ + ++C + + + + M IK N + + L+D Y K
Sbjct: 198 YDMRQNR-IVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFK 256
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
FS+ + L+ R+ V T S + +G G++ + +C++K + G +PN
Sbjct: 257 CSSFSDGHRVF-DQLSTRN----VITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPV 311
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQK-YHYSWTIVTYNIVIDAFGKAGDLQQ 307
TF ++L + G K M++ Y Y ++D G+AG LQ+
Sbjct: 312 TFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQE 364
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 10/206 (4%)
Query: 97 LELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIK 156
E+ + ++D V D S+ +LLSAY GL++ A +L +EM+ + +V++++ +I
Sbjct: 191 FEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEME-----ERNVESWNFMIS 245
Query: 157 SCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQ 216
+ + + M + + V++N ++ AY ++E+ +ML D +
Sbjct: 246 GYAAAGLVKEAKEVFDSMPVRDV----VSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEK 301
Query: 217 PDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAV 276
PD +T+ S L A +LG + E + GI+ L+D Y K K V
Sbjct: 302 PDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEV 361
Query: 277 MEYMQKYHYS-WTIVTYNIVIDAFGK 301
K S W + ++ + GK
Sbjct: 362 FRATSKRDVSTWNSIISDLSVHGLGK 387
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 91/202 (45%), Gaps = 14/202 (6%)
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
++ +++ AY+ S E A ++ EM P PD +++ ++K+C F++ + +
Sbjct: 107 THNSVIRAYANSSTPEVALTVFREMLLGP-VFPDKYSFTFVLKACAAFCGFEEGRQIHGL 165
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLG 233
G+ + NTL++ YG++ F L DR D + NS L A+ G
Sbjct: 166 FIKSGLVTDVFVENTLVNVYGRSGYFEIARKVL-----DRMPVRDAVSWNSLLSAYLEKG 220
Query: 234 QIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
+D +D+ + + NV+++N ++ Y K+ V + M +V++N
Sbjct: 221 LVDEARALFDEME----ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVR----DVVSWN 272
Query: 294 IVIDAFGKAGDLQQMEYLFRLM 315
++ A+ G ++ +F M
Sbjct: 273 AMVTAYAHVGCYNEVLEVFNKM 294
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 10/164 (6%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
L+ M KC + +KALE+F+A D ++ +++S S GL + A + EM
Sbjct: 345 LVDMYSKCGKIDKALEVFRATSKR----DVSTWNSIISDLSVHGLGKDALEIFSEM-VYE 399
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA-IHGIKPNTVTYNTLIDAYGKAKRFSE 201
G +P+ T+ ++ +C V D+ + L M+ ++ ++P Y ++D G+ + E
Sbjct: 400 GFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEE 459
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKF 245
E + E+ AD + S L A GQ++ ER ++
Sbjct: 460 AEELVNEIPADEAS----ILLESLLGACKRFGQLEQAERIANRL 499
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
L+ M G+C + E +F M D D S+ +L+S+Y G ++A + EEM +
Sbjct: 326 LVTMYGRCGKLEVGQRVFDRMHDR----DVVSWNSLISSYGVHGYGKKAIQIFEEMLAN- 380
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM-AIHGIKPNTVTYNTLIDAYGKAKRFSE 201
G P T+ ++ +C ++ + L M HGIKP Y ++D G+A R E
Sbjct: 381 GASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDE 440
Query: 202 MESTLVEMLADRDCQPDVW-TMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP-NVQTFNI 259
+ +M + P VW ++ + R GN ++ ER + ++P N + +
Sbjct: 441 AAKMVQDMRTEPG--PKVWGSLLGSCRIHGN---VELAERASRRL--FALEPKNAGNYVL 493
Query: 260 LLDSYGKGHDYKKMSAVMEYMQ 281
L D Y + + ++ V + ++
Sbjct: 494 LADIYAEAQMWDEVKRVKKLLE 515
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 117/265 (44%), Gaps = 14/265 (5%)
Query: 45 LEALHERVTAL----RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELF 100
LE L+E + + ++A VF E+ + PN+ Y + L K + A +
Sbjct: 231 LEILNELIALFGKLGKSKAAFDVFSK-TEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 101 QAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLE 160
+ M+ G + + E +++ + + G E A+S+ E K+ P +++ C
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKN 349
Query: 161 VFAFDKVQGLLSDMAIH----GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQ 216
Q +L D++ GIKP ++ +I + + + + ++ L++M++ +
Sbjct: 350 DGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMIS-KGPA 404
Query: 217 PDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAV 276
P N + A G +D + ++ G++P+V T+ +++ Y KG + +
Sbjct: 405 PGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEI 464
Query: 277 MEYMQKYHYSWTIVTYNIVIDAFGK 301
+ +K H + VTY+ +I + K
Sbjct: 465 LAEAKKKHKKLSPVTYHALIRGYCK 489
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 84/182 (46%), Gaps = 3/182 (1%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
++ ++ + R ++ A +LL +M S G P +++++ +C + D+ + +L M
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMIS-KGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLM 433
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
G+KP+ TY +I Y K E + L E V T ++ +R + + +
Sbjct: 434 ESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPV-TYHALIRGYCKIEE 492
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILLDSYG-KGHDYKKMSAVMEYMQKYHYSWTIVTYN 293
D + ++ G+QPN +N L+ S+ K D++K + E M++ ++
Sbjct: 493 YDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGLHLNAISQG 552
Query: 294 IV 295
++
Sbjct: 553 LI 554
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 95/206 (46%), Gaps = 6/206 (2%)
Query: 113 ESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLS 172
+SY+ ++S +S+ G L + L +EMK G P ++ Y+ L+ FD+ L+
Sbjct: 295 DSYSHMISCFSKVGNLFDSLRLYDEMKKR-GLAPGIEVYNSLVYVLTREDCFDEAMKLMK 353
Query: 173 DMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNL 232
+ G+KP++VTYN++I +A + + L M+++ + P V T ++ L A
Sbjct: 354 KLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISE-NLSPTVDTFHAFLEAVNFE 412
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
++ + + + + + P +TF ++L KG + + M ++ Y
Sbjct: 413 KTLEVL----GQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALY 468
Query: 293 NIVIDAFGKAGDLQQMEYLFRLMRSE 318
I G L++ ++ M+S+
Sbjct: 469 LATIQGLLSCGWLEKAREIYSEMKSK 494
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 98/224 (43%), Gaps = 11/224 (4%)
Query: 87 LGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQP 146
L +C ++E+ + DE V D S+ ++ +S GL +A S+ + M + C
Sbjct: 148 LVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCG- 206
Query: 147 DVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTY--NTLIDAYGKAKRFSEMES 204
D T L+ SC V A + G++ I+ + + N LID Y K +E+
Sbjct: 207 DSYTLVALLSSCAHVSALN--MGVMLHRIACDIRCESCVFVSNALIDMYAKC---GSLEN 261
Query: 205 TLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTF-NILLDS 263
+ R + DV T NS + +G G + K +G++PN TF +LL
Sbjct: 262 AIGVFNGMR--KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITFLGLLLGC 319
Query: 264 YGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+G + + ++H + + Y ++D +G+AG L+
Sbjct: 320 SHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLEN 363
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 130/294 (44%), Gaps = 25/294 (8%)
Query: 43 TVLEALHERVTALRWESALKVFELLREQLWYRPNSG--VYIKLIVMLGKCKQPEKALELF 100
TV+ +H W L+V E L+ Q Y+ N +Y + +LGK ++P +AL +F
Sbjct: 471 TVMRLIHFLGKLGNWRRVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVF 530
Query: 101 QAMVDE-GCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPG--------------CQ 145
AM+ + D +Y ++ ++G ++ F +++ M+S P +
Sbjct: 531 HAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLE 590
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMEST 205
PDV Y+ ++ +C++ ++ +L + G KP+ VTY +++ ++++ +
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEF 650
Query: 206 LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL---LD 262
+M + P+ + G+ D + ++ GI + + L L
Sbjct: 651 FRKM--QKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLC 708
Query: 263 SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
S G+ ++ M ++ + + +VTY +I A +G+++ Y+F M+
Sbjct: 709 SAGRCNEGLNM---LKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMK 759
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 88 GKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPD 147
GKCK E ++ M EG D SY+ + +SG +A L +EMKS + D
Sbjct: 206 GKCK------EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR-MKLD 258
Query: 148 VQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLV 207
V Y+ +I++ + + +M G +PN T+NT+I + R + L
Sbjct: 259 VVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLD 318
Query: 208 EMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKG 267
EM R CQPD T + F L + + + + +G++P + T+ +L+ + +
Sbjct: 319 EM-PKRGCQPDSITY---MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERW 374
Query: 268 HDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
+ + V + M++ + YN VIDA + G L
Sbjct: 375 GFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGML 412
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
+Y+ ++ GK P KA++L++ M +D +Y ++ A S +E + EM
Sbjct: 229 IYMDIMCKSGK---PWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREM 285
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKR 198
+ GC+P+V T++ +IK E +L +M G +P+++TY L + + ++
Sbjct: 286 RER-GCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEK 341
Query: 199 FSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFN 258
SE+ S M+ +P + T +R F G + + + + +G P+ +N
Sbjct: 342 PSEILSLFGRMIRS-GVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYN 400
Query: 259 ILLDS 263
++D+
Sbjct: 401 AVIDA 405
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 94/208 (45%), Gaps = 5/208 (2%)
Query: 109 VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQ 168
V + + + +L +S+ G + ++M T G D+ +YSI + + K
Sbjct: 186 VSNTKIHNLILRGWSKLGWWGKCKEYWKKM-DTEGVTKDLFSYSIYMDIMCKSGKPWKAV 244
Query: 169 GLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRA 228
L +M +K + V YNT+I A G A + E + + +R C+P+V T N+ ++
Sbjct: 245 KLYKEMKSRRMKLDVVAYNTVIRAIG-ASQGVEFGIRVFREMRERGCEPNVATHNTIIKL 303
Query: 229 FGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWT 288
G++ R D+ G QP+ T+ L K + + ++ M +
Sbjct: 304 LCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSE---ILSLFGRMIRSGVRPK 360
Query: 289 IVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ TY +++ F + G LQ + Y+++ M+
Sbjct: 361 MDTYVMLMRKFERWGFLQPVLYVWKTMK 388
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 73/157 (46%)
Query: 160 EVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDV 219
EVF D V + I IKPN T+N+++ ++ + +E EM + C P+V
Sbjct: 222 EVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNV 281
Query: 220 WTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEY 279
++ N + A+ G + E+ +++ + G+ ++ +N ++ + K +
Sbjct: 282 YSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRD 341
Query: 280 MQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
M T +TY +++ + KAGD+ ++R M+
Sbjct: 342 MGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMK 378
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 76/147 (51%), Gaps = 6/147 (4%)
Query: 115 YTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM 174
+ +++S++ R+GLL +A + +M G PDV T+ L+K+C+ + F + L +
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCF-GVSPDVSTFPCLVKACVALKNFKGIDFLSDTV 164
Query: 175 AIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQ 234
+ G+ N ++LI AY + + ++ S L + + +DC +W N L + G
Sbjct: 165 SSLGMDCNEFVASSLIKAYLEYGKI-DVPSKLFDRVLQKDCV--IW--NVMLNGYAKCGA 219
Query: 235 IDTMERCYDKFQTAGIQPNVQTFNILL 261
+D++ + + + I PN TF+ +L
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFDCVL 246
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LI M KC + A+ +F+ M ++ V S+ ++++A G L+ + L EM
Sbjct: 583 LIDMYAKCGNLKAAMNVFKTMKEKNIV----SWNSIIAACGNHGKLKDSLCLFHEMVEKS 638
Query: 143 GCQPDVQTYSILIKSCLEVFAFDK-VQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSE 201
G +PD T+ +I SC V D+ V+ S +GI+P Y ++D +G+A R +E
Sbjct: 639 GIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTE 698
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
T+ M PD + L A ++ E K + P+ + +L+
Sbjct: 699 AYETVKSM----PFPPDAGVWGTLLGACRLHKNVELAEVASSKLMD--LDPSNSGYYVLI 752
Query: 262 -DSYGKGHDYKKMSAVMEYMQKYH------YSW 287
+++ +++ ++ V M++ YSW
Sbjct: 753 SNAHANAREWESVTKVRSLMKEREVQKIPGYSW 785
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 98/232 (42%), Gaps = 13/232 (5%)
Query: 81 IKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKS 140
IK + GK P K LF ++ + CV+ + +L+ Y++ G L+ M+
Sbjct: 180 IKAYLEYGKIDVPSK---LFDRVLQKDCVI----WNVMLNGYAKCGALDSVIKGFSVMR- 231
Query: 141 TPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS 200
P+ T+ ++ C D L + + G+ N+L+ Y K RF
Sbjct: 232 MDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFD 291
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
+ S L M++ + D T N + + G ++ + + ++G+ P+ TF+ L
Sbjct: 292 D-ASKLFRMMS----RADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSL 346
Query: 261 LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
L S K + + + Y+ ++ S I + +IDA+ K + + +F
Sbjct: 347 LPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIF 398
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 110/261 (42%), Gaps = 21/261 (8%)
Query: 59 SALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTAL 118
SA VF+ +R + N+ + ++ K + E+ALELF+ + V + S+TAL
Sbjct: 158 SAKAVFDSIRVK-----NTISWTAMVSGYAKSGRKEEALELFRILP----VKNLYSWTAL 208
Query: 119 LSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEV---FAFDKVQGLLSDMA 175
+S + +SG AFS+ EM+ D S ++ +C + A +V GL+ +
Sbjct: 209 ISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIAL- 267
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
G N LID Y K + M DV + S + GQ
Sbjct: 268 --GFDSCVFISNALIDMYAKCSDVIAAKDIFSRMR-----HRDVVSWTSLIVGMAQHGQA 320
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQK-YHYSWTIVTYNI 294
+ YD + G++PN TF L+ + +K + + M K Y ++ Y
Sbjct: 321 EKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTC 380
Query: 295 VIDAFGKAGDLQQMEYLFRLM 315
++D G++G L + E L M
Sbjct: 381 LLDLLGRSGLLDEAENLIHTM 401
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 96/211 (45%), Gaps = 13/211 (6%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P + LI M KC +A +F +M + D S++ L+ Y++SG E A L
Sbjct: 506 PEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQSGFGEEALIL 561
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI-HGIKPNTVTYNTLIDAY 193
+EMKS G +P+ T+ ++ +C V ++ L + M HGI P + ++D
Sbjct: 562 FKEMKSA-GIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLL 620
Query: 194 GKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPN 253
+A R +E E + EM +PDV + L A G + ++ + I P
Sbjct: 621 ARAGRLNEAERFIDEM----KLEPDVVVWKTLLSACKTQGNVHLAQKAAENILK--IDPF 674
Query: 254 VQTFNILLDS-YGKGHDYKKMSAVMEYMQKY 283
T ++LL S + +++ + + M+K+
Sbjct: 675 NSTAHVLLCSMHASSGNWENAALLRSSMKKH 705
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 105/235 (44%), Gaps = 22/235 (9%)
Query: 79 VYIK--LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLE 136
VY+ L+ M KC + K+ +F + ++ + +++S Y+ GL E A +
Sbjct: 366 VYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIM----WNSIISGYASHGLGEEALKVFC 421
Query: 137 EMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDM-AIHGIKPNTVTYNTLIDAYGK 195
EM + +P+ T+ + +C ++ + M ++ G+KP T Y ++D G+
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP-NV 254
A RF+E +EM+ +PD S L A Q+D E C K I+P N
Sbjct: 482 AGRFNEA----MEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKL--IEIEPENS 535
Query: 255 QTFNILLDSY---GKGHDYKKMSAVME---YMQKYHYSWTIVTYNIVIDAFGKAG 303
T+ +L + Y G+ D ++ +M+ + SWT V + AF + G
Sbjct: 536 GTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENK--VHAFTRGG 588
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 96/240 (40%), Gaps = 25/240 (10%)
Query: 79 VYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEM 138
V ++ M K + A +F M+ V ++ ++ Y+R+G + AF ++M
Sbjct: 269 VMTSILDMYSKYGEVSYAERIFNGMIQRNIV----AWNVMIGCYARNGRVTDAFLCFQKM 324
Query: 139 KSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIK------PNTVTYNTLIDA 192
G QPDV T L+ + +L IHG P+ V LID
Sbjct: 325 SEQNGLQPDVITSINLLPA----------SAILEGRTIHGYAMRRGFLPHMVLETALIDM 374
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
YG+ + E++ DR + +V + NS + A+ G+ + + + + + P
Sbjct: 375 YGECGQLKS-----AEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVP 429
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+ T +L +Y + + + Y+ K Y + N ++ + GDL+ F
Sbjct: 430 DSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCF 489
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 6/152 (3%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LI M +C + +LE+F M ++ D S+ +L+SAYSR G E A + + M+
Sbjct: 530 LINMYSQCGTIQNSLEVFNQMSEK----DVVSWNSLISAYSRHGEGENAVNTYKTMQDEG 585
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA-IHGIKPNTVTYNTLIDAYGKAKRFSE 201
PD T+S ++ +C ++ + + M HG+ N ++ L+D G+A E
Sbjct: 586 KVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDE 645
Query: 202 MESTLVEMLADRDCQPDV-WTMNSTLRAFGNL 232
ES + + DV W + S A G+L
Sbjct: 646 AESLVKISEKTIGSRVDVWWALFSACAAHGDL 677
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 130/325 (40%), Gaps = 76/325 (23%)
Query: 63 VFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAY 122
V+E ++ + ++P +Y +++ L K + AL +++ ++G V + ++ L+
Sbjct: 215 VYEKMK-KFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGL 273
Query: 123 SRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPN 182
++G +E +L+ M+ C+PDV Y+ +IK+ + D + +M IKP+
Sbjct: 274 CKAGRIEEMLEILQRMRENL-CKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPD 332
Query: 183 TVTYNTLIDAYGKAKR-------FSEMES---------------------------TLVE 208
+ Y TL+ K R F EM+ L E
Sbjct: 333 VMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWE 392
Query: 209 MLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTA---GIQPNVQTFNILLDSYG 265
L D D+ N+ ++ ++ Q+D + Y FQ A ++P+ +T + ++ +Y
Sbjct: 393 DLVDSGYIADIGIYNAVIKGLCSVNQVD---KAYKLFQVAIEEELEPDFETLSPIMVAYV 449
Query: 266 KGHDYKKMSAVME----------------------------------YMQKYHYSWTIVT 291
+ S V+E Y+ K ++
Sbjct: 450 VMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSV 509
Query: 292 YNIVIDAFGKAGDLQQMEYLFRLMR 316
YNI+++A K GD+Q+ LF MR
Sbjct: 510 YNILMEALYKMGDIQKSLSLFYEMR 534
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 123/261 (47%), Gaps = 16/261 (6%)
Query: 52 VTALRWESALKVF-ELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVV 110
V+ +++L+V+ E+ R+++ +P+ Y L+V L K + E+ ELF M + ++
Sbjct: 309 VSEGNLDASLRVWDEMRRDEI--KPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILI 366
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGL 170
D E Y L+ + G + A +L E++ + G D+ Y+ +IK V DK L
Sbjct: 367 DREIYRVLIEGFVADGKVRSACNLWEDLVDS-GYIADIGIYNAVIKGLCSVNQVDKAYKL 425
Query: 171 LSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFG 230
++P+ T + ++ AY R S+ S ++E + + + ++ L F
Sbjct: 426 FQVAIEEELEPDFETLSPIMVAYVVMNRLSDF-SNVLERIGELG-----YPVSDYLTQFF 479
Query: 231 NLGQIDTMER--CYDKF---QTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHY 285
L D + D F +T G +V +NIL+++ K D +K ++ M+K +
Sbjct: 480 KLLCADEEKNAMALDVFYILKTKG-HGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGF 538
Query: 286 SWTIVTYNIVIDAFGKAGDLQ 306
+Y+I I F + GD++
Sbjct: 539 EPDSSSYSIAICCFVEKGDVK 559
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 6/204 (2%)
Query: 60 ALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTAL- 118
A K F +Q Y+ + Y L + A +L + M +G + + L
Sbjct: 141 AAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILI 200
Query: 119 -LSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
+ A +R GL R + + E+MK G +P V Y+ ++ + ++ FD + D
Sbjct: 201 RMHADNRRGL--RVYYVYEKMKKF-GFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKED 257
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G+ + T+ L+ KA R EM L M + C+PDV+ + ++ + G +D
Sbjct: 258 GLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENL-CKPDVFAYTAMIKTLVSEGNLDA 316
Query: 238 MERCYDKFQTAGIQPNVQTFNILL 261
R +D+ + I+P+V + L+
Sbjct: 317 SLRVWDEMRRDEIKPDVMAYGTLV 340
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 115/257 (44%), Gaps = 15/257 (5%)
Query: 59 SALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTAL 118
SALK++ + L PNS + ++ K K ++ ++ ++ GC +D +T+L
Sbjct: 117 SALKLYVCMI-SLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSL 175
Query: 119 LSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHG 178
+S Y ++G LE A + ++ +P DV +Y+ LIK + Q L ++ +
Sbjct: 176 ISMYVQNGRLEDAHKVFDK---SP--HRDVVSYTALIKGYASRGYIENAQKLFDEIPV-- 228
Query: 179 IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTM 238
+ V++N +I Y + + E +M+ + +PD TM + + A G I+
Sbjct: 229 --KDVVSWNAMISGYAETGNYKEALELFKDMM-KTNVRPDESTMVTVVSACAQSGSIELG 285
Query: 239 ERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDA 298
+ + G N++ N L+D Y K + + + E + ++++N +I
Sbjct: 286 RQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTLIGG 341
Query: 299 FGKAGDLQQMEYLFRLM 315
+ ++ LF+ M
Sbjct: 342 YTHMNLYKEALLLFQEM 358
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 100/254 (39%), Gaps = 31/254 (12%)
Query: 65 ELLRE-QLW-----YRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTAL 118
EL R+ LW + N + LI + KC + E A LF+ + + D S+ L
Sbjct: 283 ELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK----DVISWNTL 338
Query: 119 LSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFD--KVQGLLSDMAI 176
+ Y+ L + A L +EM + DV SIL +C + A D + + D +
Sbjct: 339 IGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSIL-PACAHLGAIDIGRWIHVYIDKRL 397
Query: 177 HGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQID 236
G+ + +LID Y K +L + + N+ + F G+ D
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL-----HKSLSSWNAMIFGFAMHGRAD 452
Query: 237 TMERCYDKFQTAGIQPNVQTFNILLDSYGKG-------HDYKKMSAVMEYMQKYHYSWTI 289
+ + + GIQP+ TF LL + H ++ M+ Q Y + +
Sbjct: 453 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMT------QDYKMTPKL 506
Query: 290 VTYNIVIDAFGKAG 303
Y +ID G +G
Sbjct: 507 EHYGCMIDLLGHSG 520
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMEST 205
P TY+ +I + D + +L MA G P+ VT++TLI+ Y KAKR
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 206 LVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYG 265
EM R + T + + F +G +D + ++ + G+ P+ TF+ +L
Sbjct: 68 FCEM-HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 266 KGHDYKKMSAVMEYMQK 282
+ +K A++E +QK
Sbjct: 127 SKKELRKAFAILEDLQK 143
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 11/141 (7%)
Query: 179 IKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTM 238
I P T+TYN++ID + K R + + L M A + C PDV T ++ + + ++D
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSM-ASKGCSPDVVTFSTLINGYCKAKRVDNG 64
Query: 239 ERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVI-- 296
+ + GI N T+ L+ + + D ++ M + +T++ ++
Sbjct: 65 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
Query: 297 --------DAFGKAGDLQQME 309
AF DLQ+ E
Sbjct: 125 LCSKKELRKAFAILEDLQKSE 145
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 58/118 (49%), Gaps = 5/118 (4%)
Query: 75 PNSGVYIKLIVMLGKCKQP--EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAF 132
P + Y +I G CKQ + A + +M +GC D +++ L++ Y ++ ++
Sbjct: 8 PTTITYNSMID--GFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGM 65
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLI 190
+ EM G + TY+ LI +V D Q LL++M G+ P+ +T++ ++
Sbjct: 66 EIFCEMHRR-GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 111/241 (46%), Gaps = 26/241 (10%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
L+V KC AL LF+ + GCV + S+TA++S + ++ E A L EMK
Sbjct: 336 LMVAYSKCTAMLDALRLFKEI---GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR-K 391
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G +P+ TYS+++ + L V + +V + + + ++ L+DAY K + E
Sbjct: 392 GVRPNEFTYSVIL-TALPVISPSEVH---AQVVKTNYERSSTVGTALLDAYVKLGKVEE- 446
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
+ + + D+ D+ ++ L + G+ + + + + GI+PN TF+ +L+
Sbjct: 447 AAKVFSGIDDK----DIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILN 502
Query: 263 -------SYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
S G+G + + K ++ + ++ + K G+++ E +F+
Sbjct: 503 VCAATNASMGQGKQFHGFAI------KSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ 556
Query: 316 R 316
R
Sbjct: 557 R 557
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 128/304 (42%), Gaps = 41/304 (13%)
Query: 36 SKKLLPRTVLEALHERV------------TAL--------RWESALKVFELLREQLWYRP 75
S +LPR++ +H R+ TAL + ESA VFE ++++
Sbjct: 150 STMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDE----- 204
Query: 76 NSGVYIKLIVMLGKCKQP--EKALELFQAMVDEGCVVDCESYTALLSAYSRSG-LLERAF 132
V ++ G Q E A E+F + VV Y A++ +SRSG +R+
Sbjct: 205 --NVVCCTSMISGYMNQGFVEDAEEIFNTTKVKDIVV----YNAMVEGFSRSGETAKRSV 258
Query: 133 SLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDA 192
+ M+ G P++ T++ +I +C + + + Q + + + G+ + ++L+D
Sbjct: 259 DMYISMQRA-GFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDM 317
Query: 193 YGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQP 252
Y K ++ +M + +V++ S + +G G + + + + I+P
Sbjct: 318 YAKCGGINDARRVFDQMQ-----EKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEP 372
Query: 253 NVQTFNILLDSYGKGHDYKKMSAVMEYMQK-YHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
N TF L + K + E MQ+ Y + Y ++D G+AGDL +
Sbjct: 373 NYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEF 432
Query: 312 FRLM 315
R M
Sbjct: 433 ARAM 436
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 90/206 (43%), Gaps = 23/206 (11%)
Query: 116 TALLSAYSRSGLLERAFSLLEEMK--STPGCQPDVQTY--SILIKSCLEVFAFDKVQGLL 171
TAL+ Y +SG LE A ++ E MK + C + Y ++ E+F KV+
Sbjct: 179 TALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK--- 235
Query: 172 SDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGN 231
+ V YN +++ + ++ ++ + + P++ T S + A
Sbjct: 236 ----------DIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSV 285
Query: 232 LGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQ-KYHYSWTIV 290
L + ++ + + +G+ +++ + LLD Y K V + MQ K +SWT
Sbjct: 286 LTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWT-- 343
Query: 291 TYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ID +GK G+ ++ LF M+
Sbjct: 344 ---SMIDGYGKNGNPEEALELFTRMK 366
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 112/263 (42%), Gaps = 49/263 (18%)
Query: 58 ESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTA 117
E A KVF+ L + R +S ++ L+ + + E AL +F M +EG V + T+
Sbjct: 212 EDAQKVFDELPD----RDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITS 267
Query: 118 LLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIH 177
+LSA++ SG ++ S+ + + +K+
Sbjct: 268 VLSAFTVSGDIDNGRSI----------------HGLAVKT-------------------- 291
Query: 178 GIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDT 237
G + V N LID YGK+K E S + E + +RD ++T NS L G D
Sbjct: 292 GSGSDIVVSNALIDMYGKSKWLEEANS-IFEAMDERD----LFTWNSVLCVHDYCGDHDG 346
Query: 238 MERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHY----SWTIVTYN 293
+++ +GI+P++ T +L + G+ ++ + YM S +N
Sbjct: 347 TLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHN 406
Query: 294 IVIDAFGKAGDLQQMEYLFRLMR 316
++D + K GDL+ +F MR
Sbjct: 407 SLMDMYVKCGDLRDARMVFDSMR 429
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 16/239 (6%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
+ LI +C + + A +LF M V D Y A++ + +SG + A L +EM
Sbjct: 147 WTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMMDGFVKSGDMTSARRLFDEMT 203
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
V T++ +I + D + L M + N V++NT+I Y + K+
Sbjct: 204 -----HKTVITWTTMIHGYCNIKDIDAARKLFDAMP----ERNLVSWNTMIGGYCQNKQP 254
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
E EM A PD T+ S L A + G + E C+ Q + V+
Sbjct: 255 QEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTA 314
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+LD Y K + +K + + M + + ++N +I + G+ + LF M E
Sbjct: 315 ILDMYSKCGEIEKAKRIFDEMPEKQ----VASWNAMIHGYALNGNARAALDLFVTMMIE 369
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 109/248 (43%), Gaps = 13/248 (5%)
Query: 74 RPNSGVYI--KLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERA 131
R V+I L+ M GKC + A ++F M V ++TAL++ Y +S ++
Sbjct: 235 RVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVV----TWTALIAGYVQSRCFDKG 290
Query: 132 FSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLID 191
+ EEM + P+ +T S ++ +C V A + + + M + I+ NT TLID
Sbjct: 291 MLVFEEMLKSD-VAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLID 349
Query: 192 AYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQ 251
Y K E ++ +R + +V+T + + F G + ++ +
Sbjct: 350 LYVKCGCLEE-----AILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVS 404
Query: 252 PNVQTFNILLDSYGKGHDYKKMSAVMEYMQ-KYHYSWTIVTYNIVIDAFGKAGDLQQMEY 310
PN TF +L + G ++ + M+ +++ Y ++D FG+ G L++ +
Sbjct: 405 PNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKA 464
Query: 311 LFRLMRSE 318
L M E
Sbjct: 465 LIERMPME 472
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 58/123 (47%), Gaps = 1/123 (0%)
Query: 88 GKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPD 147
GK +P AL M + G YT L+ Y SG L++A + EM + G P+
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREM-TVKGQLPN 758
Query: 148 VQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLV 207
V TY+ +I+ F + LL +M G PN V Y+TL+ KA + SE +
Sbjct: 759 VFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIK 818
Query: 208 EML 210
EM+
Sbjct: 819 EMV 821
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 123/295 (41%), Gaps = 50/295 (16%)
Query: 56 RWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESY 115
R A +VFE + + PN+ + L K PE+A+ +F+ M DEG D ++
Sbjct: 210 RISDARRVFEWIVD-----PNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAF 264
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI-----KSC----LEVF---- 162
+++ Y R G L+ A L EM S PDV ++++I + C +E F
Sbjct: 265 VTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRGCETVAIEYFFNMR 319
Query: 163 ----------------AFDKVQGLLSDMAIH------GIKPNTVTYNTLIDAYGKAKRFS 200
A V L + +H G+ N ++L+ Y K ++
Sbjct: 320 KSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKM- 378
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
E + + E L +++ DV+ N+ +R + + G+ + + +++G + TF L
Sbjct: 379 EAAAKVFEALEEKN---DVF-WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSL 434
Query: 261 LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
L + HD + S + K + + N ++D + K G L+ +F M
Sbjct: 435 LSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 20/238 (8%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
L+ M KC + A +F+ +VD V +T L S Y ++GL E A + E M+
Sbjct: 201 LVDMYAKCDRISDARRVFEWIVDPNTVC----WTCLFSGYVKAGLPEEAVLVFERMRD-E 255
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G +PD + +I + + + + L +M+ P+ V +N +I +GK
Sbjct: 256 GHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS----SPDVVAWNVMISGHGKRG----C 307
Query: 203 ESTLVEMLAD---RDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNI 259
E+ +E + + T+ S L A G + +D + + G+ N+ +
Sbjct: 308 ETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSS 367
Query: 260 LLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMRS 317
L+ Y K + + V E +++ + V +N +I + G+ ++ LF M+S
Sbjct: 368 LVSMYSKCEKMEAAAKVFEALEEKND----VFWNAMIRGYAHNGESHKVMELFMDMKS 421
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 100/224 (44%), Gaps = 19/224 (8%)
Query: 89 KCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDV 148
KC + + A Q + D+ D +T ++SAY S + A + EEM G +PDV
Sbjct: 290 KCGRLDDA----QVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM-CCSGIKPDV 344
Query: 149 QTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVE 208
+ +I +C + DK + + S + ++G++ N LI+ Y K +
Sbjct: 345 VSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEK 404
Query: 209 MLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGH 268
M + +V + +S + A G+ + + + ++PN TF +L YG H
Sbjct: 405 MP-----RRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVL--YGCSH 457
Query: 269 -----DYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+ KK+ A M +Y+ + + Y ++D FG+A L++
Sbjct: 458 SGLVEEGKKIFASM--TDEYNITPKLEHYGCMVDLFGRANLLRE 499
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LI M KC + A +F ++ D S+ ++++ Y++ GL +A L E M
Sbjct: 262 LISMYCKCGDLKDAFRIFDQFSNK----DVVSWNSMIAGYAQHGLAMQAIELFELMMPKS 317
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G +PD TY ++ SC + + + MA HG+KP Y+ L+D G RF +
Sbjct: 318 GTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLG---RFGLL 374
Query: 203 ESTLVEMLADRDCQPD--VW 220
+ L E++ + +P+ +W
Sbjct: 375 QEAL-ELIENMPMKPNSVIW 393
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/310 (20%), Positives = 129/310 (41%), Gaps = 46/310 (14%)
Query: 41 PRTVLEALHERVTALRWESALKVFELLREQLWYRPNSGVYIKLIVMLGKCKQPEKALELF 100
P + LH ++A +K+ L+ R N + KLI + C++ + A ++F
Sbjct: 131 PEAYTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIF 190
Query: 101 QAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKST---PG----------C--- 144
+ D + + + + A+ YSR+G A + +M + PG C
Sbjct: 191 DDVTDSSLLTE-KVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDL 249
Query: 145 ------------------QPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTY 186
+ D Y++L+K +E FD + + M+ + N VT+
Sbjct: 250 KDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMS----ERNVVTW 305
Query: 187 NTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVW-TMNSTLRAFGNLGQIDTMERCYDKF 245
N+LI K R EM + +M + W T+ + L A + + T + + +
Sbjct: 306 NSLISVLSKKVRVHEMFNLFRKM--QEEMIGFSWATLTTILPACSRVAALLTGKEIHAQI 363
Query: 246 QTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
+ +P+V N L+D YGK + + V + M + + ++NI+++ + G++
Sbjct: 364 LKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM----LTKDLASWNIMLNCYAINGNI 419
Query: 306 QQMEYLFRLM 315
+++ LF M
Sbjct: 420 EEVINLFEWM 429
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 80/166 (48%), Gaps = 17/166 (10%)
Query: 43 TVLEALHERVTALRWESALKVFELLREQLWYRPNSG--VYIKLIVMLGKCKQPEKALELF 100
TV+ +H W L+V E L+ Q Y+ N +Y + +LGK ++P +AL +F
Sbjct: 471 TVMRLIHFLGKLGNWRRVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVF 530
Query: 101 QAMVDE-GCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPG--------------CQ 145
AM+ + D +Y ++ ++G ++ F +++ M+S P +
Sbjct: 531 HAMLLQISSYPDMVAYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLE 590
Query: 146 PDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLID 191
PDV Y+ ++ +C++ ++ +L + G KP+ VTY +++
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIME 636
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 16/200 (8%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
L++M KC E+A +LF+ M + D S+ +++ YSR G E A E MK
Sbjct: 450 LLLMYCKCGSIEEANDLFKEMAGK----DIVSWNTMIAGYSRHGFGEVALRFFESMKR-E 504
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAI-HGIKPNTVTYNTLIDAYGKAKRFSE 201
G +PD T ++ +C DK + M +G+ PN+ Y ++D G+A +
Sbjct: 505 GLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLED 564
Query: 202 MESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILL 261
+ + M +PD + L A G + E DK ++P +LL
Sbjct: 565 AHNLMKNM----PFEPDAAIWGTLLGASRVHGNTELAETAADKI--FAMEPENSGMYVLL 618
Query: 262 D----SYGKGHDYKKMSAVM 277
S G+ D K+ M
Sbjct: 619 SNLYASSGRWGDVGKLRVRM 638
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 100/248 (40%), Gaps = 25/248 (10%)
Query: 76 NSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLL 135
N + +I +C + +A LF M D S+ A+++ YS+SG A L
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLF 397
Query: 136 EEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGK 195
+M+ G + + ++S + +C +V A + + L + G + N L+ Y K
Sbjct: 398 VQMEREGG-RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Query: 196 AKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQ 255
E EM D+ + N+ + + G + R ++ + G++P+
Sbjct: 457 CGSIEEANDLFKEMAG-----KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDA 511
Query: 256 TFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWT--------IVTYNIVIDAFGKAGDLQQ 307
T +L + + +++ ++Y Y+ T Y ++D G+AG L+
Sbjct: 512 TMVAVLSACSH-------TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLED 564
Query: 308 MEYLFRLM 315
L + M
Sbjct: 565 AHNLMKNM 572
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 97/225 (43%), Gaps = 6/225 (2%)
Query: 94 EKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSI 153
E+++ L + ++ + VVD Y+ ++ A ++ G L A + +EM G + Y++
Sbjct: 286 EESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQR-GFSANSFVYTV 344
Query: 154 LIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTL--VEMLA 211
++ C E + + LLS+M G+ P T+N LI + RF E L E++
Sbjct: 345 FVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFA---RFGWEEKGLEYCEVMV 401
Query: 212 DRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYK 271
R P N +++ + ++ K G P+ T++ L+ + +G+D
Sbjct: 402 TRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDID 461
Query: 272 KMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+ + M+ S + +I G ++ E ++M+
Sbjct: 462 QALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMK 506
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 80 YIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMK 139
+ +IV G+ + E+A F M++ G + ++ LLSA SGLLE A S LE MK
Sbjct: 512 WTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMK 571
Query: 140 STPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRF 199
S G +P ++ Y ++ + F + L++ M ++P+ + +L+ A G K
Sbjct: 572 SEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMP---LEPDKTIWTSLLTACGTHKNA 628
Query: 200 SEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG 249
+ ++L P V+T S A+ LG D + + + + G
Sbjct: 629 GLVTVIAEKLLKGFPDDPSVYT--SLSNAYATLGMWDQLSKVREAAKKLG 676
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 13/212 (6%)
Query: 111 DCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFD---KV 167
D +++ L+ +SG AF L E+ G D S ++K C + + ++
Sbjct: 407 DIIAFSGLIRGCVKSGFNSLAFYLFRELIKL-GLDADQFIVSNILKVCSSLASLGWGKQI 465
Query: 168 QGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLR 227
GL G + VT L+D Y K E+++ +V L D + DV + +
Sbjct: 466 HGLCIK---KGYESEPVTATALVDMYVKC---GEIDNGVV--LFDGMLERDVVSWTGIIV 517
Query: 228 AFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQ-KYHYS 286
FG G+++ R + K GI+PN TF LL + ++ + +E M+ +Y
Sbjct: 518 GFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLE 577
Query: 287 WTIVTYNIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ Y V+D G+AG Q+ L M E
Sbjct: 578 PYLEHYYCVVDLLGQAGLFQEANELINKMPLE 609
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 7/249 (2%)
Query: 71 LWYRPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLER 130
L +P+ + LI + EK E+ + M +G D S+T+++S + E+
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 131 AFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLI 190
AF ++M T G P+ T L+ +C + + + + G++ + + L+
Sbjct: 272 AFDAFKQML-THGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALL 330
Query: 191 DAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGI 250
D YGK SE +L + + T NS + + N G D +D+ + G
Sbjct: 331 DMYGKCGFISE-----AMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE 385
Query: 251 QPNVQTFNILLDSYGKGHDYKKMSAVMEYMQ-KYHYSWTIVTYNIVIDAFGKAGDLQQME 309
+ + TF +L + + MQ KY + Y ++D G+AG L +
Sbjct: 386 KLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAY 445
Query: 310 YLFRLMRSE 318
+ + MR E
Sbjct: 446 EMIKAMRME 454
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 106/221 (47%), Gaps = 11/221 (4%)
Query: 96 ALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILI 155
AL LF+ M ++ + S+T ++S Y ++ + + A L EM+++ +PD + + +
Sbjct: 200 ALTLFRKMAEKNAI----SWTTMISGYVQADMNKEALQLFHEMQNS-DVEPDNVSLANAL 254
Query: 156 KSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
+C ++ A ++ + + S + I+ ++V LID Y K EME L +
Sbjct: 255 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKC---GEMEEALEVFKNIKKK 311
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
WT + A+ G+ + + + + + Q GI+PNV TF +L + ++
Sbjct: 312 SVQAWTALISGYAYHGHGR-EAISK-FMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKL 369
Query: 276 VMEYMQK-YHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
+ M++ Y+ TI Y ++D G+AG L + + + M
Sbjct: 370 IFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEM 410
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 74 RPNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFS 133
R +S + LI M KC + E+ALE+F+ + + +++TAL+S Y+ G A S
Sbjct: 279 RMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS----VQAWTALISGYAYHGHGREAIS 334
Query: 134 LLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA-IHGIKPNTVTYNTLIDA 192
EM+ G +P+V T++ ++ +C ++ + + M + +KP Y ++D
Sbjct: 335 KFMEMQKM-GIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDL 393
Query: 193 YGKAKRFSEMESTLVEM 209
G+A E + + EM
Sbjct: 394 LGRAGLLDEAKRFIQEM 410
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 80/168 (47%), Gaps = 2/168 (1%)
Query: 150 TYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEM 209
TY L+ + +K +GLL+ M I P++++YN+L+ Y K ++ + + E+
Sbjct: 125 TYGSLLNCYCKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQEL 184
Query: 210 LADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAG-IQPNVQTFNILLDSYGKGH 268
A+ + PD +T N +RA I +ER ++ G + P+ T++ + Y
Sbjct: 185 KAE-NVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAG 243
Query: 269 DYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLMR 316
+K ++ ++ + Y +I +G+ G L ++ ++R +R
Sbjct: 244 LSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLR 291
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 102/225 (45%), Gaps = 5/225 (2%)
Query: 90 CKQ--PEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPD 147
CK+ EKA L M + SY +L++ Y+++G E+ ++++E+K+ PD
Sbjct: 134 CKELLTEKAEGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKA-ENVMPD 192
Query: 148 VQTYSILIKSCLEVFAFDKVQGLLSDMAIHG-IKPNTVTYNTLIDAYGKAKRFSEMESTL 206
TY++ +++ V+ ++ +M G + P+ TY+ + Y A + E L
Sbjct: 193 SYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKAL 252
Query: 207 VEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGK 266
E L ++ Q D + +G LG++ + R + + A + + + ++ K
Sbjct: 253 QE-LEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVK 311
Query: 267 GHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYL 311
+D + + Q ++ I N++I A+ + G +Q+ L
Sbjct: 312 LNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKANEL 356
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 86/201 (42%), Gaps = 3/201 (1%)
Query: 114 SYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSD 173
+Y +LL+ Y + L E+A LL +MK P +Y+ L+ + +KV ++ +
Sbjct: 125 TYGSLLNCYCKELLTEKAEGLLNKMKEL-NITPSSMSYNSLMTLYTKTGETEKVPAMIQE 183
Query: 174 MAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRA-FGNL 232
+ + P++ TYN + A S +E + EM D PD WT S + + + +
Sbjct: 184 LKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPD-WTTYSNMASIYVDA 242
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
G E+ + + Q + + L+ YG+ ++ + ++ + V Y
Sbjct: 243 GLSQKAEKALQELEMKNTQRDFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAY 302
Query: 293 NIVIDAFGKAGDLQQMEYLFR 313
+I K DL E LF+
Sbjct: 303 LNMIQVLVKLNDLPGAETLFK 323
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/231 (19%), Positives = 96/231 (41%), Gaps = 1/231 (0%)
Query: 75 PNSGVYIKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSL 134
P+S Y L+ + K + EK + Q + E + D +Y + A + + + +
Sbjct: 156 PSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERV 215
Query: 135 LEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYG 194
+EEM PD TYS + ++ K + L ++ + + + Y LI YG
Sbjct: 216 IEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYG 275
Query: 195 KAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNV 254
+ + +E+ + +V +N ++ L + E + ++Q ++
Sbjct: 276 RLGKLTEVYRIWRSLRLAIPKTSNVAYLN-MIQVLVKLNDLPGAETLFKEWQANCSTYDI 334
Query: 255 QTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
+ N+L+ +Y + +K + + E + T+ I +D + K+GD+
Sbjct: 335 RIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGDM 385
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 113/265 (42%), Gaps = 4/265 (1%)
Query: 52 VTALRWESALKVFELLREQLWYRPN---SGVYIKLIVMLGKCKQPEKALELFQAMVDEGC 108
VT R + + V +LL + +P+ ++ I++ G+ +++++ F+ +
Sbjct: 83 VTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEI 142
Query: 109 VVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQ 168
+S ALL A + + A + EM G +PD++TY+ +I+ E +
Sbjct: 143 PRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSY 202
Query: 169 GLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRA 228
++++M IKP ++ +ID + K ++F E+ + M+ + V T N ++
Sbjct: 203 SIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVM-RMMDEFGVHVGVATYNIMIQC 261
Query: 229 FGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWT 288
+ + D + ++PN T+++L+ + + + + E M Y
Sbjct: 262 LCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPD 321
Query: 289 IVTYNIVIDAFGKAGDLQQMEYLFR 313
Y +I K GD + L R
Sbjct: 322 SECYFTLIHCLCKGGDFETALILCR 346
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 112/266 (42%), Gaps = 35/266 (13%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
LIVM + + E + ++F +M D + S+ ++LS+Y++ G ++ A LL+EM+
Sbjct: 130 LIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSSYTKLGYVDDAIGLLDEME-IC 184
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS-- 200
G +PD+ T++ L+ +L M I G+KP+T + ++L+ A +
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 201 ----------------EMESTLVEMLADRDCQP------------DVWTMNSTLRAFGNL 232
+E+TL++M P ++ NS +
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 233 GQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTY 292
+ E + + GI+P+ T+N L Y +K V+ M++ + +V++
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 293 NIVIDAFGKAGDLQQMEYLFRLMRSE 318
+ K G+ + +F M+ E
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEE 390
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 10/194 (5%)
Query: 88 GKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPD 147
G+C A +LF M D ++ ++ RSG E+A L EM+ + G +
Sbjct: 34 GRCVSLGFANKLFDEMPKR----DDLAWNEIVMVNLRSGNWEKAVELFREMQFS-GAKAY 88
Query: 148 VQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEMESTLV 207
T L++ C F + + + + G++ N N+LI Y + + E+ +
Sbjct: 89 DSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKL-ELSRKVF 147
Query: 208 EMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKG 267
+ DR+ + NS L ++ LG +D D+ + G++P++ T+N LL Y
Sbjct: 148 NSMKDRNLS----SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASK 203
Query: 268 HDYKKMSAVMEYMQ 281
K AV++ MQ
Sbjct: 204 GLSKDAIAVLKRMQ 217
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 117/273 (42%), Gaps = 26/273 (9%)
Query: 47 ALHERVTALRWESALKVFELLR---EQLWYRPNSGVYIKLIVMLGKCKQPEKALELFQAM 103
A + V+ L + LK E L E+ +P++ + L +PEKAL++ M
Sbjct: 293 AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM 352
Query: 104 VDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIK--SCLEV 161
++G + S+TA+ S S++G A + +M+ G P+ T S L+K CL +
Sbjct: 353 KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQE-EGVGPNAATMSTLLKILGCLSL 411
Query: 162 FAFDKVQGLLSDMAIHG--IKPNTV----TYNTLIDAYGKAKRFSEMESTLVEMLADRDC 215
L S +HG ++ N + L+D YGK+ +++S + ++
Sbjct: 412 --------LHSGKEVHGFCLRKNLICDAYVATALVDMYGKS---GDLQSAIEIFWGIKNK 460
Query: 216 QPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSA 275
W N L + G+ + + AG++P+ TF +L ++
Sbjct: 461 SLASW--NCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWK 518
Query: 276 VMEYMQ-KYHYSWTIVTYNIVIDAFGKAGDLQQ 307
+ M+ +Y TI + ++D G++G L +
Sbjct: 519 YFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDE 551
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 78/197 (39%), Gaps = 6/197 (3%)
Query: 116 TALLSAYSRSGLLERAFSLLEEMKSTPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMA 175
T L+ Y ++G L A + + M + ++ ++ L+ + L+ M
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMDA-----KNIVAWNSLVSGLSYACLLKDAEALMIRME 318
Query: 176 IHGIKPNTVTYNTLIDAYGKAKRFSEMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQI 235
GIKP+ +T+N+L Y + E ++ + ++ P+V + + G
Sbjct: 319 KEGIKPDAITWNSLASGYATLGK-PEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNF 377
Query: 236 DTMERCYDKFQTAGIQPNVQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIV 295
+ + K Q G+ PN T + LL G V + + + +
Sbjct: 378 RNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATAL 437
Query: 296 IDAFGKAGDLQQMEYLF 312
+D +GK+GDLQ +F
Sbjct: 438 VDMYGKSGDLQSAIEIF 454
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 97/223 (43%), Gaps = 1/223 (0%)
Query: 84 IVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTPG 143
IV+ + + +L +F+ + +S ALL A + + A + EM G
Sbjct: 123 IVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYG 182
Query: 144 CQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEME 203
+PD++TY+ +IK E + ++++M GIKPN+ ++ +I + + E+
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 204 STLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLDS 263
L M+ DR V T N +++ + + D +AG++PN T++ L+
Sbjct: 243 KVLA-MMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHG 301
Query: 264 YGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQ 306
+ D+++ + + M Y +I K GD +
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFE 344
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 93/239 (38%), Gaps = 27/239 (11%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
L+ M KC + A +F+ M D V SYT++++ Y+R GL A L EEM+
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVV----SYTSMIAGYAREGLAGEAVKLFEEMEE-E 391
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
G PDV T + ++ C D+ + + + + + + N L+D Y K E
Sbjct: 392 GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEA 451
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDK---------FQTAGIQPN 253
E EM D+ + N+ + + + CY + P+
Sbjct: 452 ELVFSEMRV-----KDIISWNTIIGGYS--------KNCYANEALSLFNLLLEEKRFSPD 498
Query: 254 VQTFNILLDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLF 312
+T +L + + K + Y+ + Y N ++D + K G L LF
Sbjct: 499 ERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLF 557
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 18/228 (7%)
Query: 83 LIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKSTP 142
L+ M KC ++A +F M V D S+ ++ YS++ A SL +
Sbjct: 438 LMDMYAKCGSMQEAELVFSEMR----VKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 493
Query: 143 GCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFSEM 202
PD +T + ++ +C + AFDK + + + +G + N+L+D Y K
Sbjct: 494 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL--- 550
Query: 203 ESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNILLD 262
L ML D D+ + + +G G +++ + AGI+ + +F LL
Sbjct: 551 --LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLL- 607
Query: 263 SYGKGH-----DYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDL 305
Y H + + +M + K T+ Y ++D + GDL
Sbjct: 608 -YACSHSGLVDEGWRFFNIMRHECKIEP--TVEHYACIVDMLARTGDL 652
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 10/235 (4%)
Query: 81 IKLIVMLGKCKQPEKALELFQAMVDEGCVVDCESYTALLSAYSRSGLLERAFSLLEEMKS 140
I L M KC Q A LF M ++ + A++S Y+++G A + EM +
Sbjct: 261 ISLNTMYAKCGQVATAKILFDKMKSPNLIL----WNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 141 TPGCQPDVQTYSILIKSCLEVFAFDKVQGLLSDMAIHGIKPNTVTYNTLIDAYGKAKRFS 200
+PD + + I +C +V + ++ + + + + + + LID + K
Sbjct: 317 KD-VRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC---G 372
Query: 201 EMESTLVEMLADRDCQPDVWTMNSTLRAFGNLGQIDTMERCYDKFQTAGIQPNVQTFNIL 260
+E ++ DR DV ++ + +G G+ Y + G+ PN TF L
Sbjct: 373 SVEGA--RLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGL 430
Query: 261 LDSYGKGHDYKKMSAVMEYMQKYHYSWTIVTYNIVIDAFGKAGDLQQMEYLFRLM 315
L + ++ M + + Y VID G+AG L Q + + M
Sbjct: 431 LMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM 485