Miyakogusa Predicted Gene
- Lj1g3v3542650.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3542650.1 tr|G7J0V1|G7J0V1_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_3g0,48.98,4e-19,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
PPR_2,P,CUFF.30914.1
(98 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-41
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-25
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 75 8e-15
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 75 8e-15
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-09
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-09
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-09
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 57 3e-09
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 56 4e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 56 5e-09
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-09
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 55 8e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 55 9e-09
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 55 1e-08
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-08
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-08
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 6e-08
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-08
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 52 1e-07
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 51 1e-07
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 51 1e-07
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-07
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-07
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-07
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 51 2e-07
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-07
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 3e-07
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-07
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-07
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 5e-07
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-07
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 5e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-07
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-07
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-07
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-07
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 49 9e-07
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-07
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-06
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 1e-06
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 48 1e-06
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 48 1e-06
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 48 1e-06
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 48 1e-06
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 1e-06
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-06
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 48 1e-06
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 48 2e-06
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 2e-06
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 2e-06
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 2e-06
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 47 2e-06
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 2e-06
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 47 3e-06
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 47 3e-06
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 47 3e-06
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 47 4e-06
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 4e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 46 4e-06
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 4e-06
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 4e-06
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 46 6e-06
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 162 bits (409), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 75/97 (77%), Positives = 85/97 (87%)
Query: 1 MEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVD 60
MEYLFRLM+SERI PSCVTLCSLVRAY RA K +KIGGVLRF+ENSD+ LD VFFNCLVD
Sbjct: 381 MEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVD 440
Query: 61 AYGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
AYGR+ AEMKGVLE+ME++ KPD +TYRTM+KAY
Sbjct: 441 AYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 53/97 (54%)
Query: 1 MEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVD 60
ME + +S I+P+ T L+ +Y ++G +K+ V+ +++ V +N ++D
Sbjct: 311 MENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVID 370
Query: 61 AYGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
A+GR G L +M+ + +M+ P VT ++++AY
Sbjct: 371 AFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAY 407
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
L +++ + KP T+ S +RA+ G+ E + ++S + + FN L+D+YG
Sbjct: 279 LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYG 338
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G +M V+E M++ +VTY +I A+
Sbjct: 339 KSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAF 372
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
L R+ S +P T L++++ + +K+ +L + + +T+ +N L+DAYG
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYG 267
Query: 64 RLGCLAEMKGVL-EIMEQRCCKPDVVTYRTMIKAY 97
+ EM+ L +++ + CKPD T + ++A+
Sbjct: 268 KAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAF 302
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 72/98 (73%)
Query: 1 MEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVD 60
M+ +FR M+ + +KP+ +T CSLV AY++AG KI VLR + NSDV+LDT FFNC+++
Sbjct: 375 MDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIIN 434
Query: 61 AYGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
AYG+ G LA MK + ME+R CKPD +T+ TMIK Y+
Sbjct: 435 AYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYT 472
Score = 55.1 bits (131), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 54/98 (55%)
Query: 1 MEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVD 60
ME + + ++P T L+ ++ +AG +K+ V+ F+E L TV +N +++
Sbjct: 305 MESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIE 364
Query: 61 AYGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
+G+ G + +M V M+ + KP+ +TY +++ AYS
Sbjct: 365 TFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYS 402
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 60/95 (63%)
Query: 3 YLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAY 62
YL ++ ER +P+ VT L+RA+A++GK +++ + + ++ S V D FN ++DAY
Sbjct: 194 YLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAY 253
Query: 63 GRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
G+ G + EM+ VL M CKPD++T+ +I +Y
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSY 288
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 75.1 bits (183), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 60/95 (63%)
Query: 3 YLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAY 62
YL ++ ER +P+ VT L+RA+A++GK +++ + + ++ S V D FN ++DAY
Sbjct: 194 YLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAY 253
Query: 63 GRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
G+ G + EM+ VL M CKPD++T+ +I +Y
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSY 288
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 59.3 bits (142), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGC 67
++S+ + PS C+L AYA+ G ++ VL+ +EN + + + N L++A+G G
Sbjct: 155 LKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIEPNLIMLNVLINAFGTAGK 214
Query: 68 LAEMKGVL-EIMEQRCCKPDVVTYRTMIKAYS 98
E + I E PDVVTY T++KA++
Sbjct: 215 HMEALSIYHHIKETVWIHPDVVTYSTLMKAFT 246
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
F ++S +P VT +L++ + +AG + VL+ +E + D+V +N LV AY
Sbjct: 303 FFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYV 362
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
R G E GV+E+M ++ P+ +TY T+I AY
Sbjct: 363 RAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAY 396
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 49/96 (51%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E F L + KP V S++ + R ++ G+L + + D V +N L+D
Sbjct: 616 ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDM 675
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
Y R G + + +L+ +E+ KPD+V+Y T+IK +
Sbjct: 676 YVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGF 711
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%)
Query: 18 VTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGCLAEMKGVLEI 77
VT LV AY RAG ++ GV+ + V+ + + + ++DAYG+ G E +
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYS 411
Query: 78 MEQRCCKPDVVTYRTMI 94
M++ C P+ TY ++
Sbjct: 412 MKEAGCVPNTCTYNAVL 428
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 49/89 (55%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGC 67
M+S +KPS +L+ AYA+ G E+ R + + + + N L++A+G
Sbjct: 575 MKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRR 634
Query: 68 LAEMKGVLEIMEQRCCKPDVVTYRTMIKA 96
AE VL+ M++ KPDVVTY T++KA
Sbjct: 635 DAEAFAVLQYMKENGVKPDVVTYTTLMKA 663
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%)
Query: 5 FRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGR 64
FR+M S+ +KPS + L SL+ A+ + + VL++++ + V D V + L+ A R
Sbjct: 607 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Query: 65 LGCLAEMKGVLEIMEQRCCKPD 86
+ ++ V E M CKPD
Sbjct: 667 VDKFQKVPVVYEEMIMSGCKPD 688
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGC 67
MRS + KP+ T +LV A+AR G EK + ++ + D +N L+++Y R G
Sbjct: 312 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 371
Query: 68 LAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ +M+ C+PD +Y M+ AY
Sbjct: 372 PYGAAEIFSLMQHMGCEPDRASYNIMVDAY 401
Score = 55.5 bits (132), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E + + M ++P L S++ Y R G+ K+ +L +EN D +N L++
Sbjct: 446 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 505
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
YG+ G L ++ + ++++ +PDVVT+ + I AYS
Sbjct: 506 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYS 542
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E +F M+ I P+ + L+ AY++A K +++ + + V DT N +++
Sbjct: 411 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 470
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
YGRLG +M+ +L ME C D+ TY +I Y
Sbjct: 471 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIY 506
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E +F ++ + ++P +L+ +Y+RAG P + +++ D +N +VDA
Sbjct: 341 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 400
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
YGR G ++ + V E M++ P + ++ ++ AYS
Sbjct: 401 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGC 67
MRS + KP+ T +LV A+AR G EK + ++ + D +N L+++Y R G
Sbjct: 290 MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGY 349
Query: 68 LAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ +M+ C+PD +Y M+ AY
Sbjct: 350 PYGAAEIFSLMQHMGCEPDRASYNIMVDAY 379
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 52/97 (53%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E + + M ++P L S++ Y R G+ K+ +L +EN D +N L++
Sbjct: 424 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 483
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
YG+ G L ++ + ++++ +PDVVT+ + I AYS
Sbjct: 484 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYS 520
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 49/96 (51%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E +F M+ I P+ + L+ AY++A K +++ + + V DT N +++
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
YGRLG +M+ +L ME C D+ TY +I Y
Sbjct: 449 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIY 484
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E +F ++ + ++P +L+ +Y+RAG P + +++ D +N +VDA
Sbjct: 319 EEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDA 378
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
YGR G ++ + V E M++ P + ++ ++ AYS
Sbjct: 379 YGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 56.6 bits (135), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+F M +E +KP+ V+ +L+ AYA G VL ++ + ++ D V + CL+++YG
Sbjct: 342 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 401
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
R + K V +M + KP+VVTY +I AY
Sbjct: 402 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 435
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGK-PEKIGGVLRFVENSDVLLDTVFFNCLVDAY 62
L++ MR +++K VT L+ R K PE I L+ +E+ + L ++ ++ AY
Sbjct: 517 LYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS-YLKEMEDLSIPLTKEVYSSVLCAY 575
Query: 63 GRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
+ G + E + + M+ C+PDV+ Y +M+ AY+
Sbjct: 576 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 611
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGC 67
++ I P V+ L+ +Y R+ +P K V + + V +N L+DAYG G
Sbjct: 381 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 440
Query: 68 LAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
LAE + MEQ KP+VV+ T++ A S
Sbjct: 441 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 471
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 49/91 (53%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+FR M + IKP+ V++C+L+ A +R+ K + VL ++ + L+T +N + +Y
Sbjct: 447 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYI 506
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMI 94
L + + + M ++ K D VT+ +I
Sbjct: 507 NAAELEKAIALYQSMRKKKVKADSVTFTILI 537
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 56.2 bits (134), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/94 (34%), Positives = 53/94 (56%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+F M +E +KP+ V+ +L+ AYA G VL ++ + ++ D V + CL+++YG
Sbjct: 210 VFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYG 269
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
R + K V +M + KP+VVTY +I AY
Sbjct: 270 RSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAY 303
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGK-PEKIGGVLRFVENSDVLLDTVFFNCLVDAY 62
L++ MR +++K VT L+ R K PE I L+ +E+ + L ++ ++ AY
Sbjct: 385 LYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS-YLKEMEDLSIPLTKEVYSSVLCAY 443
Query: 63 GRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
+ G + E + + M+ C+PDV+ Y +M+ AY+
Sbjct: 444 SKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYN 479
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGC 67
++ I P V+ L+ +Y R+ +P K V + + V +N L+DAYG G
Sbjct: 249 IKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGF 308
Query: 68 LAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
LAE + MEQ KP+VV+ T++ A S
Sbjct: 309 LAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 339
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 49/91 (53%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+FR M + IKP+ V++C+L+ A +R+ K + VL ++ + L+T +N + +Y
Sbjct: 315 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYI 374
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMI 94
L + + + M ++ K D VT+ +I
Sbjct: 375 NAAELEKAIALYQSMRKKKVKADSVTFTILI 405
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 56.2 bits (134), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%)
Query: 1 MEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVD 60
ME F MRSE +K T C L+ YA AG K+ ++ ++ +T F+N ++
Sbjct: 355 MELTFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVIS 414
Query: 61 AYGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
A + L EM+ V M++R C D T+ M++AY
Sbjct: 415 ACAKADDLIEMERVYIRMKERQCVCDSRTFEIMVEAY 451
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 55.8 bits (133), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+ R M I P VT +L+ + + GK + + + + DT+ +N L+D +
Sbjct: 302 MLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFC 361
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ CL E + ++M + C+PD+VTY +I +Y
Sbjct: 362 KENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M + IK VT SL+ GK + +LR + +++ D V F+ L+D +
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFV 326
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G L E K + M R PD +TY ++I +
Sbjct: 327 KEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 55.5 bits (132), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF+ M ++ IK S VT SLVR +AGK +L+ + + +++ + + FN L+D +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G L E + + M R P+++TY T++ Y
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITYNTLMDGY 343
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 50/94 (53%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
L + M S I P+ +T L+ + + GK ++ + + + + + + +N L+D Y
Sbjct: 285 LLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYC 344
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
L+E +L++M + C PD+VT+ ++IK Y
Sbjct: 345 MQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGY 378
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 55.1 bits (131), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+F + E KPS +T +LV A R + ++ VE + + DT+ FN +++A
Sbjct: 341 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 400
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
G L + + E M++ CKP T+ T+IK Y
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY 434
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLL-DTVFFNCLVDAY 62
+F M+ KP+ T +L++ Y + GK E+ +L + ++L + N LV A+
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Query: 63 GRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
+ E ++ M+ KPDVVT+ T+ KAY+
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 506
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 54.7 bits (130), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 1/99 (1%)
Query: 1 MEYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVD 60
+E LF MR + +KPS T L+ AYAR +P+ + +LR +E+ + + + CL+
Sbjct: 398 VEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLIS 457
Query: 61 AYGRLGCLAEMKG-VLEIMEQRCCKPDVVTYRTMIKAYS 98
AYGR +++M M++ KP +Y +I AYS
Sbjct: 458 AYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYS 496
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 47/94 (50%)
Query: 5 FRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGR 64
F M E IKPS T S++ A+ R+G K+ + + + + + +N L+D + +
Sbjct: 508 FEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAK 567
Query: 65 LGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
G E + V+ + +P V+TY ++ AY+
Sbjct: 568 QGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYA 601
Score = 45.4 bits (106), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/94 (29%), Positives = 51/94 (54%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+++LM E+IK + +T +L+ +A+ G + V+ + + +N L++AY
Sbjct: 542 IWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYA 601
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
R G A++ +L+ M KPD +TY TMI A+
Sbjct: 602 RGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M ++ IKP T L+ G+ +L + ++ D VFFN L+DA+
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 64 RLGCLAEMKGVL-EIMEQRCCKPDVVTYRTMIKAY 97
+ G L E + + E+++ + C PDVV Y T+IK +
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGF 366
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 53.9 bits (128), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E L R M +I P VT +L+ A + GK + + + + T+ +N ++D
Sbjct: 131 EQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDG 190
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ + L + K +L+ M + C PDVVT+ T+I Y
Sbjct: 191 FCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 50/96 (52%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
+ L R M ++I P VT +L+ A+ + K + + + + + T+ +N ++D
Sbjct: 65 DQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDG 124
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ + + + K +L+ M + C PDVVT+ T+I Y
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGY 160
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M ++ I+P+ VT SL+ G+ +L + + + V FN L+DA+
Sbjct: 280 LFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFF 339
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G L E + + E M QR PD +TY +I +
Sbjct: 340 KEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGF 373
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 15 PSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGCLAEMKGV 74
P + +L+R + R GK K +L +E S + D + +N ++ Y + G E+
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAG---EINNA 191
Query: 75 LEIMEQRCCKPDVVTYRTMIKA 96
L ++++ PDVVTY T++++
Sbjct: 192 LSVLDRMSVSPDVVTYNTILRS 213
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 52.4 bits (124), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
F+ M +P+ T ++ + G E G+ ++ ++ DTV +N ++D +G
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
++G L + E M+ CC+PDV+TY +I +
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCF 342
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 50/94 (53%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
L R M +I P+ VT L+ ++ + GK + +L+ + + +T+ +N L+D +
Sbjct: 320 LLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFC 379
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ L E ++++M + C PD++T+ +I Y
Sbjct: 380 KENRLEEAIQMVDLMISKGCDPDIMTFNILINGY 413
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M+ P+ T L++ +AG+ ++ G + + + D VF N L++ G
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILG 349
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKA 96
++G + E+ V M C P VV+Y T+IKA
Sbjct: 350 KVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKA 382
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVL-RFVENSDVLLDTVFFNCLVDAY 62
F MR+ I P+ ++ +L++A+A +G+P+ V + + V +D + +N LV+ Y
Sbjct: 545 FFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGY 604
Query: 63 GRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
RLG + + + V+ M++ P+V TY ++ S
Sbjct: 605 CRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVS 640
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/96 (28%), Positives = 45/96 (46%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E +FR M I P T LV + + + EK+ +L + + L D +N L++A
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
Y + G + E GV M+ C P+ TY ++ +
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLF 362
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 51/95 (53%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF MR E I+P VT +L+ A A G ++ V R + + ++ D ++ LV+ +G
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFG 293
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
+L L ++ +L M PD+ +Y +++AY+
Sbjct: 294 KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYA 328
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 50/95 (52%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF MR I V+ +L+ Y + G+ E+ +LR + + + D V +N L+ YG
Sbjct: 431 LFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYG 490
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
+ G E+K V M++ P+++TY T+I YS
Sbjct: 491 KQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYS 525
Score = 49.7 bits (117), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/94 (24%), Positives = 52/94 (55%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+F M+ E + P+ +T +L+ Y++ G ++ + R +++ + D V ++ L+DA
Sbjct: 501 VFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALC 560
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G + +++ M + P+VVTY ++I A+
Sbjct: 561 KNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAF 594
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 51.2 bits (121), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 51/96 (53%), Gaps = 1/96 (1%)
Query: 3 YLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVL-LDTVFFNCLVDA 61
+++ M S + P T +V AY R+G +K + E+S L L+ V +N L++
Sbjct: 211 HVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLING 270
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
Y +G + M VL +M +R +VVTY ++IK Y
Sbjct: 271 YAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGY 306
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
L+ M +KP+ V SL+ +A +G E+ R +E V + + L+ AY
Sbjct: 607 LYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYS 666
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMI 94
++GCL E + V + M+ PDV +M+
Sbjct: 667 KVGCLEEARRVYDKMKDSEGGPDVAASNSML 697
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 42/80 (52%)
Query: 19 TLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGCLAEMKGVLEIM 78
T +L+ Y +AG+ + + S V +DTV FN ++ G G L+E + +L+ M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 79 EQRCCKPDVVTYRTMIKAYS 98
E++ PD TY ++ ++
Sbjct: 367 EEKGISPDTKTYNILLSLHA 386
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF MR E ++P+ +L+ Y + G+ K+ +LR + + +V + + + ++ Y
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
R G + E +L M ++ PD +TY+ I Y
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF MR E ++P+ +L+ Y + G+ K+ +LR + + +V + + + ++ Y
Sbjct: 702 LFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
R G + E +L M ++ PD +TY+ I Y
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
+ +F+ + +PS ++ +L+ A + I ++ VE S LD++FFN +++A
Sbjct: 65 QTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINA 124
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G + + L M++ P TY T+IK Y
Sbjct: 125 FSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFV---ENSDVLLDTVFFNCLVDAYGR 64
M+ + P+ T +L++ Y AGKPE+ +L + N DV + FN LV A+ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 65 LGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ E V++ ME+ +PD VTY T+ Y
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY 233
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M ++ I+P T SL+ G+ +L + + + V FN L+DA+
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G L E + + + M QR P++VTY ++I +
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
L M +I P+ VT SL+ A+A+ GK + + + + + V +N L++ +
Sbjct: 297 LLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFC 356
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
L E + + +M + C PDVVTY T+I +
Sbjct: 357 MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 48/96 (50%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
+ +F+ + +PS ++ +L+ A + I ++ VE S LD++FFN +++A
Sbjct: 65 QTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINA 124
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G + + L M++ P TY T+IK Y
Sbjct: 125 FSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGY 160
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFV---ENSDVLLDTVFFNCLVDAYGR 64
M+ + P+ T +L++ Y AGKPE+ +L + N DV + FN LV A+ +
Sbjct: 141 MKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCK 200
Query: 65 LGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ E V++ ME+ +PD VTY T+ Y
Sbjct: 201 KKKVEEAWEVVKKMEECGVRPDTVTYNTIATCY 233
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M+ + P T L+ ++ R G+ ++ + +E SD D + +N L++ G
Sbjct: 464 LFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLG 523
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G + E + M+++ PDVVTY T+++ +
Sbjct: 524 KNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECF 557
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 49/91 (53%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF+ M+ +P+ +L+R +A+ G+ + +L +++S + D V +N +D++G
Sbjct: 190 LFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFG 249
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMI 94
++G + +E KPD VTY +MI
Sbjct: 250 KVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E LF M + R+ PS +T +L+ Y +AG PEK V ++ + + FN L+
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
+ G + + + VL+ M+ PD T+ + YS
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYS 330
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF+ M ++ I+P+ VT SL+ G+ +L + + + V FN L+DA+
Sbjct: 207 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 266
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G E + + + M +R PD+ TY ++I +
Sbjct: 267 KEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 48/94 (51%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
L R M +I P+ + +L+ + + G + + + + V+ + +N L++ +
Sbjct: 241 LLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFC 300
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
GCL + K + ++M + C PDVVTY T+I +
Sbjct: 301 IHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF+ M ++ I+P+ VT SL+ G+ +L + + + V FN L+DA+
Sbjct: 282 LFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFV 341
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G E + + + M +R PD+ TY +++ +
Sbjct: 342 KEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
L M ++I P+ VT +L+ A+ + GK + + + + D +N LV+ +
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
L + K + E M + C PDVVTY T+IK +
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
++ M+ I+P V+ L++AY RA + E+ V + ++ V +N L+DA+
Sbjct: 301 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
G + + K V + M + PD+ +Y TM+ AY
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAY 394
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
++ M+ I+P V+ L++AY RA + E+ V + ++ V +N L+DA+
Sbjct: 308 IYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 367
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
G + + K V + M + PD+ +Y TM+ AY
Sbjct: 368 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAY 401
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGC 67
M + P+ VT S + ++R G+ + + R +++ DV + V + L+D Y R+
Sbjct: 264 MERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMND 322
Query: 68 LAEMKGVLEIMEQRCCKPDVVTYRTMIK 95
+ E + E+ME R P VVTY ++++
Sbjct: 323 IDEALRLREVMESRGFSPGVVTYNSILR 350
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+F+ M+ P T +L+ AY+R G E+ V R + ++ V D +N ++ A
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
R G + + VL ME CKP+ +TY +++ AY+
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYA 570
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/96 (22%), Positives = 47/96 (48%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E + R + ++ IKP ++ +++ AY R + + + NS ++ D + +N + +
Sbjct: 684 EEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
Y E GV+ M + C+P+ TY +++ Y
Sbjct: 744 YAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGY 779
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 49/95 (51%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+F MR+ KP+ T + ++ Y GK ++ + + + D V +N L+ +G
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
+ G +E+ GV + M++ P+ T+ T+I AYS
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYS 500
Score = 45.4 bits (106), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 40/90 (44%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGC 67
M + KP T +L+ + RAGK E + + N+ + FN + YG G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 68 LAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
EM + + + PD+VT+ T++ +
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 49/91 (53%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+ + M+ I P+ VT SL+ ++G+ L +++ + + + F+ L+DAY
Sbjct: 70 VLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMI 94
+ G L+++ V ++M Q P+V TY ++I
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLI 160
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGC 67
M S++I P+ +T +L+ AYA+ GK K+ V + + + + ++ L+
Sbjct: 109 MDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNR 168
Query: 68 LAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ E +L++M + C P+VVTY T+ +
Sbjct: 169 VDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M ++ I+P+ VT SL+R G+ +L + + + V F+ L+DA+
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G L E + + + M +R PD+ TY ++I +
Sbjct: 338 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGC 67
M +I P+ VT +L+ A+ + GK K + + + + ++ L++ + L
Sbjct: 314 MIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDR 373
Query: 68 LAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
L E K +LE+M ++ C P+VVTY T+I +
Sbjct: 374 LGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 48.5 bits (114), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M ++ I+P+ VT SL+R G+ +L + + + V F+ L+DA+
Sbjct: 277 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 336
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G L E + + + M +R PD+ TY ++I +
Sbjct: 337 KEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%)
Query: 8 MRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGC 67
MR++ KP+ + LV + + GK ++ VL + + +TV FNCL+ A+ +
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHR 474
Query: 68 LAEMKGVLEIMEQRCCKPDVVTYRTMIKA 96
+ E + M ++ CKPDV T+ ++I
Sbjct: 475 IPEAVEIFREMPRKGCKPDVYTFNSLISG 503
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 46/95 (48%)
Query: 3 YLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAY 62
+L R M RI+P+ +T +L+ A+ + GK + + + V D + L++
Sbjct: 244 WLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGL 303
Query: 63 GRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
G L E + + +ME+ C P+ V Y T+I +
Sbjct: 304 CMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGF 338
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M + +P+ VT +LV G+ +LR + + + + F L+DA+
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKA 96
++G L E K + +M Q PDV TY ++I
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLING 302
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
+YLF M + I P+ T ++ + G+ +LR + ++ D + FN L+ A
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G L E + + + M RC PD VTY +MI +
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 47/96 (48%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
+YLF M + I P+ T ++ + G+ +LR + ++ D + FN L+ A
Sbjct: 316 QYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G L E + + + M RC PD VTY +MI +
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF+ M SE +K S VT+ ++ A A+ E V ++E + V ++ N ++D Y
Sbjct: 219 LFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYT 278
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
+ G + + K + + ME++ D VT+ TM+ Y+
Sbjct: 279 KCGSIEDAKRLFDAMEEK----DNVTWTTMLDGYA 309
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 47/96 (48%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
+ L R M +IKP +T +L+ A+ + GK + + + + + L++
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ GC+ E + + +ME + C PDVV Y ++I +
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGF 327
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF+ M ++ I+P+ VT SL+ G+ +L + + D F+ L+DA+
Sbjct: 278 LFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFV 337
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G L E + + + M +R P +VTY ++I +
Sbjct: 338 KEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGF 371
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+ + M+ I+P VT SL+ +G +L + + D + F+ L+D YG
Sbjct: 206 VLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKA 96
+ G L E K M QR P++VTY ++I
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+ R M I P VT +L+ + + G ++ + + + S V + V +N +++
Sbjct: 233 MLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLC 292
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
G L + K ++M + C P+VVTY T+I +
Sbjct: 293 MHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 47.8 bits (112), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E +F MRS + P V S++ + R+G +K V+ + ++ D V + L+
Sbjct: 360 EKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 419
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKA 96
Y R G ++ + M Q+ C DVVTY T++
Sbjct: 420 YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 38/78 (48%)
Query: 19 TLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGCLAEMKGVLEIM 78
TL +V A + GK EK+G L V+ V D V +N L+ AY G + E ++ M
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 79 EQRCCKPDVVTYRTMIKA 96
+ P V TY T+I
Sbjct: 297 PGKGFSPGVYTYNTVING 314
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%)
Query: 5 FRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGR 64
F L+RS+ S +L+ + R G E GV + + S V ++ N +V+A +
Sbjct: 188 FTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCK 247
Query: 65 LGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
G + ++ L ++++ PD+VTY T+I AYS
Sbjct: 248 DGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M KP+ T L+ R GK E+ GV R + + + +N L++ Y
Sbjct: 323 LFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYC 382
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKA 96
+ G + +L +ME+R CKP+V T+ +++
Sbjct: 383 KDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 50/93 (53%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M + KP+ T LVR Y +AG +K +L +E+ VL + V +N +V ++
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKA 96
R G + + ++E M + PD+VT+ + I A
Sbjct: 229 REGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 53/96 (55%)
Query: 2 EYLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDA 61
E L+ M++ +KP+ VT +L+ Y R + + VL ++ +++ ++ + FN ++D
Sbjct: 270 EKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDG 329
Query: 62 YGRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
G G L+E G++E P +VTY +++K +
Sbjct: 330 LGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNF 365
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M + K + +L+R + AG+ + +LR + + D V F+ L+D +
Sbjct: 269 LFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFV 328
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G L E + + + M QR PD VTY ++I +
Sbjct: 329 KEGKLREAEELHKEMIQRGISPDTVTYTSLIDGF 362
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 3 YLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAY 62
Y+++LM SE +KP VT+ LV + + G + +V+ + + + N L+D +
Sbjct: 243 YVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMF 302
Query: 63 GRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
+ G + E + + + +E+R +V++ TMI Y+
Sbjct: 303 SKCGDIHEARRIFDNLEKRT----IVSWTTMISGYA 334
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 47.0 bits (110), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/91 (27%), Positives = 52/91 (57%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
L R++ ++ P VT ++++A ++ G+ + +L ++ + ++ + V +N LV Y
Sbjct: 227 LERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYC 286
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMI 94
+LG L E ++E+M+Q PD+ TY +I
Sbjct: 287 KLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 46/93 (49%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF M + ++ VT SLV +G+ ++R + D++ + + F ++D +
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKA 96
+ G +E + E M +RC PDV TY ++I
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLING 288
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
LF+ M++ERI PS T SL+ Y + E+ + + S V + + F+ L+D Y
Sbjct: 396 LFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYC 455
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ + G+ M + PDVVTY +I A+
Sbjct: 456 NVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAH 489
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+FR M+ I+P+ VTL S++ A +R G E + + E+S + +D V + L+D Y
Sbjct: 261 VFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYS 320
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
+ G + + V E R + +V+T+ MI ++
Sbjct: 321 KCGIIEKAIHVFE----RLPRENVITWSAMINGFA 351
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%)
Query: 4 LFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYG 63
+F M +R + +CV + S+++ Y + G + + + +++ LD V +N DA G
Sbjct: 348 VFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALG 407
Query: 64 RLGCLAEMKGVLEIMEQRCCKPDVVTYRTMI 94
+LG + E + M + PDV+ Y T+I
Sbjct: 408 KLGKVEEAIELFREMTGKGIAPDVINYTTLI 438
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 44/76 (57%)
Query: 22 SLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGCLAEMKGVLEIMEQR 81
+L+ AY + + EK +L+ ++ S D +N +++ YG G + E+ VL+ +++
Sbjct: 773 TLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKES 832
Query: 82 CCKPDVVTYRTMIKAY 97
PD+ +Y T+IKAY
Sbjct: 833 GLGPDLCSYNTLIKAY 848
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 4/96 (4%)
Query: 3 YLFRLMRSERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAY 62
+LF +R E++ P T S+++A A + V L DTV N L+ AY
Sbjct: 355 HLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAY 414
Query: 63 GRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAYS 98
+ G L V + M+ R DVV++ +M+KAYS
Sbjct: 415 AKCGSLDLCMRVFDDMDSR----DVVSWNSMLKAYS 446
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 4 LFRLMRSERI-KPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAY 62
+F+ ++S + P VT S++ Y +AGK + +L + + V FN LVD Y
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 63 GRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G + + + M C PDVVT+ ++I Y
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 46.2 bits (108), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
Query: 4 LFRLMRSERI-KPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAY 62
+F+ ++S + P VT S++ Y +AGK + +L + + V FN LVD Y
Sbjct: 263 MFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGY 322
Query: 63 GRLGCLAEMKGVLEIMEQRCCKPDVVTYRTMIKAY 97
+ G + + + M C PDVVT+ ++I Y
Sbjct: 323 AKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGY 357
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 46/85 (54%)
Query: 10 SERIKPSCVTLCSLVRAYARAGKPEKIGGVLRFVENSDVLLDTVFFNCLVDAYGRLGCLA 69
++ +P+ +T L+R + GK E+ +L +E + DT+ FN L+ + G +
Sbjct: 230 QQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVE 289
Query: 70 EMKGVLEIMEQRCCKPDVVTYRTMI 94
E +LE M+ + C+P+ TY+ ++
Sbjct: 290 EGIDLLERMKVKGCEPNPGTYQEVL 314