Miyakogusa Predicted Gene

Lj1g3v3531570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3531570.1 Non Chatacterized Hit- tr|I1MCG0|I1MCG0_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,81.93,0,Diphthamide_syn,Diphthamide synthesis, DPH1/DPH2;
DIPHTHAMIDE BIOSYNTHESIS PROTEIN 2 (DPH2 HOMOLOG),,CUFF.30827.1
         (312 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G59630.1 | Symbols:  | diphthamide synthesis DPH2 family prot...   379   e-105
AT5G62030.1 | Symbols:  | diphthamide synthesis DPH2 family prot...    51   8e-07

>AT3G59630.1 | Symbols:  | diphthamide synthesis DPH2 family protein
           | chr3:22025355-22027776 REVERSE LENGTH=491
          Length = 491

 Score =  379 bits (974), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 187/290 (64%), Positives = 225/290 (77%), Gaps = 8/290 (2%)

Query: 27  GGLTWKLSEGQSMEDYLLFWIGLDNSAFANVVLTFNACEIVRYDVTGNRMVTDLSPQRRI 86
           GGLTW L EG  +EDYLLFWIG D+SAFANVVLTFN C+IVRYD   + +VT+   QRRI
Sbjct: 202 GGLTWDLPEGSKIEDYLLFWIGSDSSAFANVVLTFNGCDIVRYDAEEDSLVTEFYQQRRI 261

Query: 87  LKRRYYLVERAKDANIVAILVGTLGVAGYLNIINQMTELIKGAGKKPYTLVMGKPNPAPL 146
           LKRRYYLVE+AKDANI+ ILVGTLGVAGYL++I+ M  LI  AGKK Y L MG+PNPA L
Sbjct: 262 LKRRYYLVEKAKDANIIGILVGTLGVAGYLHMIHHMQALISAAGKKSYILAMGRPNPAKL 321

Query: 147 ANFPECDVFLYVSCAQTALLDSKEYLAPVITPFEASIAFNRGSQWTGAYVMGFRDLINLP 206
           ANFPECDVF+Y+SCAQTALLDSKE+++PVITPFEA++AF+RGS+WTGAY+M F+D+IN  
Sbjct: 322 ANFPECDVFIYISCAQTALLDSKEFMSPVITPFEANLAFSRGSEWTGAYLMHFQDVINSV 381

Query: 207 QLKVENQ--DEEARFSFLQGRYVEDF---DNQENGEQQS-EALALANATEKALQLQ-NNC 259
           + + E     EE RFSF QG YVED    D  +NGE+ + E + L  A EKALQL+ N+ 
Sbjct: 382 KSESEAHIGSEEPRFSFFQGGYVEDHKTNDQAKNGEEDTGETMTLVQAAEKALQLRGNDH 441

Query: 260 NSLIRGD-ARSGAEFFRNRSYHGLNMPSENTSPEPYFKGRSGRASGYEDE 308
           NSL +   A+SG E+F NR Y GL + SENT PEPY  GRSG+ASGY+ E
Sbjct: 442 NSLTKQTAAKSGPEYFLNRVYRGLEINSENTLPEPYIVGRSGKASGYKHE 491


>AT5G62030.1 | Symbols:  | diphthamide synthesis DPH2 family protein
           | chr5:24919046-24920407 FORWARD LENGTH=453
          Length = 453

 Score = 51.2 bits (121), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 99/232 (42%), Gaps = 14/232 (6%)

Query: 25  VIGGLTWKLSEGQSMEDYLLFWIGLDNSAFANVVLTFNACEIVRYDVTGNRMVTDLSPQR 84
           V+G    K+   +  +D +L ++          ++     +  RYD    ++  +    +
Sbjct: 206 VLGCTAPKVKTVEDCKDQVLVFVADGRFHLEAFMIANPKIKAFRYDPYLGKLFLEEYDHK 265

Query: 85  RILKRRYYLVERAKDANIVAILVGTLGVAGYLNIINQMTELIKGAGKKPYTLVMGKPNPA 144
            + + R   + RA++A    I++GTLG  G   I+ ++ + +   G     ++M + +P 
Sbjct: 266 GMRETRMRAIARAREAKTWGIVLGTLGRQGNPKILERLEKKMMEKGIDSTVVLMSELSPT 325

Query: 145 PLANFPE-CDVFLYVSCAQTALLDSKEYLAPVITPFEASIA--FNRGSQWTGAYVMGF-- 199
            +A F +  D ++ ++C + ++   + +L P++T FEA IA  F RG  W          
Sbjct: 326 RVALFEDSVDAWVQIACPRLSIDWGEAFLKPLLTTFEAEIALGFIRG-WWENDSSSRVNS 384

Query: 200 ------RDLINLPQLKVEN--QDEEARFSFLQGRYVEDFDNQENGEQQSEAL 243
                  D       K EN   D++     L G Y  D+  QE GE  S  L
Sbjct: 385 SSGCCKEDKETSCACKNENVKDDKKDNDGALDGDYPMDYYAQEGGEWNSSYL 436