Miyakogusa Predicted Gene

Lj1g3v3529530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3529530.1 Non Chatacterized Hit- tr|I1HP97|I1HP97_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,35.09,0.001,SUBFAMILY NOT NAMED,NULL; SINGLE STRANDED DNA BINDING
PROTEIN,Sequence-specific single-strand
DNA-bi,NODE_35589_length_721_cov_87.274620.path2.1
         (200 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32700.7 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387...   251   3e-67
AT2G32700.2 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387...   251   3e-67
AT2G32700.1 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387...   251   3e-67
AT2G32700.4 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387...   251   3e-67
AT2G32700.5 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387...   251   3e-67
AT2G32700.3 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387...   251   3e-67
AT2G32700.6 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-1387...   251   3e-67
AT4G32551.2 | Symbols: LUG | LisH dimerisation motif;WD40/YVTN r...   158   2e-39
AT4G32551.1 | Symbols: LUG, RON2 | LisH dimerisation motif;WD40/...   158   2e-39

>AT2G32700.7 | Symbols: LUH | LEUNIG_homolog |
           chr2:13867235-13871844 FORWARD LENGTH=806
          Length = 806

 Score =  251 bits (640), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 128/194 (65%), Positives = 145/194 (74%), Gaps = 3/194 (1%)

Query: 8   AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
           AQSNWEADKMLDVYI+DY VK+KLHN AK+FMTEGKVS DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2   AQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWD 61

Query: 68  IFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPALGGSLNA 127
           IFI+RTNEKHSEAAA+YIE QQ K                       DPNHP+LGG +NA
Sbjct: 62  IFIARTNEKHSEAAAAYIEAQQGK-AKEQQMQIQQLQMMRQAQMQRRDPNHPSLGGPMNA 120

Query: 128 MNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATSHQGQLVHG 187
           + SEGM+GQ  AS LA KMYEE+MK P  M+S+ S    DA R+ALLKSAT+H GQ+V G
Sbjct: 121 IGSEGMIGQSNASALAAKMYEERMKQPNPMNSETSQPHLDA-RMALLKSATNHHGQIVQG 179

Query: 188 N-SGNISTALQQIQ 200
           N  G +S ALQQIQ
Sbjct: 180 NHQGGVSAALQQIQ 193


>AT2G32700.2 | Symbols: LUH | LEUNIG_homolog |
           chr2:13867235-13871844 FORWARD LENGTH=787
          Length = 787

 Score =  251 bits (640), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 128/194 (65%), Positives = 145/194 (74%), Gaps = 3/194 (1%)

Query: 8   AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
           AQSNWEADKMLDVYI+DY VK+KLHN AK+FMTEGKVS DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2   AQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWD 61

Query: 68  IFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPALGGSLNA 127
           IFI+RTNEKHSEAAA+YIE QQ K                       DPNHP+LGG +NA
Sbjct: 62  IFIARTNEKHSEAAAAYIEAQQGK-AKEQQMQIQQLQMMRQAQMQRRDPNHPSLGGPMNA 120

Query: 128 MNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATSHQGQLVHG 187
           + SEGM+GQ  AS LA KMYEE+MK P  M+S+ S    DA R+ALLKSAT+H GQ+V G
Sbjct: 121 IGSEGMIGQSNASALAAKMYEERMKQPNPMNSETSQPHLDA-RMALLKSATNHHGQIVQG 179

Query: 188 N-SGNISTALQQIQ 200
           N  G +S ALQQIQ
Sbjct: 180 NHQGGVSAALQQIQ 193


>AT2G32700.1 | Symbols: LUH | LEUNIG_homolog |
           chr2:13867235-13871844 FORWARD LENGTH=787
          Length = 787

 Score =  251 bits (640), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 128/194 (65%), Positives = 145/194 (74%), Gaps = 3/194 (1%)

Query: 8   AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
           AQSNWEADKMLDVYI+DY VK+KLHN AK+FMTEGKVS DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2   AQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWD 61

Query: 68  IFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPALGGSLNA 127
           IFI+RTNEKHSEAAA+YIE QQ K                       DPNHP+LGG +NA
Sbjct: 62  IFIARTNEKHSEAAAAYIEAQQGK-AKEQQMQIQQLQMMRQAQMQRRDPNHPSLGGPMNA 120

Query: 128 MNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATSHQGQLVHG 187
           + SEGM+GQ  AS LA KMYEE+MK P  M+S+ S    DA R+ALLKSAT+H GQ+V G
Sbjct: 121 IGSEGMIGQSNASALAAKMYEERMKQPNPMNSETSQPHLDA-RMALLKSATNHHGQIVQG 179

Query: 188 N-SGNISTALQQIQ 200
           N  G +S ALQQIQ
Sbjct: 180 NHQGGVSAALQQIQ 193


>AT2G32700.4 | Symbols: LUH | LEUNIG_homolog |
           chr2:13867235-13871844 FORWARD LENGTH=787
          Length = 787

 Score =  251 bits (640), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 128/194 (65%), Positives = 145/194 (74%), Gaps = 3/194 (1%)

Query: 8   AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
           AQSNWEADKMLDVYI+DY VK+KLHN AK+FMTEGKVS DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2   AQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWD 61

Query: 68  IFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPALGGSLNA 127
           IFI+RTNEKHSEAAA+YIE QQ K                       DPNHP+LGG +NA
Sbjct: 62  IFIARTNEKHSEAAAAYIEAQQGK-AKEQQMQIQQLQMMRQAQMQRRDPNHPSLGGPMNA 120

Query: 128 MNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATSHQGQLVHG 187
           + SEGM+GQ  AS LA KMYEE+MK P  M+S+ S    DA R+ALLKSAT+H GQ+V G
Sbjct: 121 IGSEGMIGQSNASALAAKMYEERMKQPNPMNSETSQPHLDA-RMALLKSATNHHGQIVQG 179

Query: 188 N-SGNISTALQQIQ 200
           N  G +S ALQQIQ
Sbjct: 180 NHQGGVSAALQQIQ 193


>AT2G32700.5 | Symbols: LUH | LEUNIG_homolog |
           chr2:13867235-13871844 FORWARD LENGTH=787
          Length = 787

 Score =  251 bits (640), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 128/194 (65%), Positives = 145/194 (74%), Gaps = 3/194 (1%)

Query: 8   AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
           AQSNWEADKMLDVYI+DY VK+KLHN AK+FMTEGKVS DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2   AQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWD 61

Query: 68  IFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPALGGSLNA 127
           IFI+RTNEKHSEAAA+YIE QQ K                       DPNHP+LGG +NA
Sbjct: 62  IFIARTNEKHSEAAAAYIEAQQGK-AKEQQMQIQQLQMMRQAQMQRRDPNHPSLGGPMNA 120

Query: 128 MNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATSHQGQLVHG 187
           + SEGM+GQ  AS LA KMYEE+MK P  M+S+ S    DA R+ALLKSAT+H GQ+V G
Sbjct: 121 IGSEGMIGQSNASALAAKMYEERMKQPNPMNSETSQPHLDA-RMALLKSATNHHGQIVQG 179

Query: 188 N-SGNISTALQQIQ 200
           N  G +S ALQQIQ
Sbjct: 180 NHQGGVSAALQQIQ 193


>AT2G32700.3 | Symbols: LUH | LEUNIG_homolog |
           chr2:13867235-13871844 FORWARD LENGTH=787
          Length = 787

 Score =  251 bits (640), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 128/194 (65%), Positives = 145/194 (74%), Gaps = 3/194 (1%)

Query: 8   AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
           AQSNWEADKMLDVYI+DY VK+KLHN AK+FMTEGKVS DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2   AQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWD 61

Query: 68  IFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPALGGSLNA 127
           IFI+RTNEKHSEAAA+YIE QQ K                       DPNHP+LGG +NA
Sbjct: 62  IFIARTNEKHSEAAAAYIEAQQGK-AKEQQMQIQQLQMMRQAQMQRRDPNHPSLGGPMNA 120

Query: 128 MNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATSHQGQLVHG 187
           + SEGM+GQ  AS LA KMYEE+MK P  M+S+ S    DA R+ALLKSAT+H GQ+V G
Sbjct: 121 IGSEGMIGQSNASALAAKMYEERMKQPNPMNSETSQPHLDA-RMALLKSATNHHGQIVQG 179

Query: 188 N-SGNISTALQQIQ 200
           N  G +S ALQQIQ
Sbjct: 180 NHQGGVSAALQQIQ 193


>AT2G32700.6 | Symbols: LUH | LEUNIG_homolog |
           chr2:13867235-13871844 FORWARD LENGTH=785
          Length = 785

 Score =  251 bits (640), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 128/194 (65%), Positives = 145/194 (74%), Gaps = 3/194 (1%)

Query: 8   AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
           AQSNWEADKMLDVYI+DY VK+KLHN AK+FMTEGKVS DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2   AQSNWEADKMLDVYIYDYLVKKKLHNTAKSFMTEGKVSPDPVAIDAPGGFLFEWWSVFWD 61

Query: 68  IFISRTNEKHSEAAASYIETQQIKXXXXXXXXXXXXXXXXXXXXXXXDPNHPALGGSLNA 127
           IFI+RTNEKHSEAAA+YIE QQ K                       DPNHP+LGG +NA
Sbjct: 62  IFIARTNEKHSEAAAAYIEAQQGK-AKEQQMQIQQLQMMRQAQMQRRDPNHPSLGGPMNA 120

Query: 128 MNSEGMLGQPPASVLAMKMYEEQMKHPQSMDSDPSPTLSDANRIALLKSATSHQGQLVHG 187
           + SEGM+GQ  AS LA KMYEE+MK P  M+S+ S    DA R+ALLKSAT+H GQ+V G
Sbjct: 121 IGSEGMIGQSNASALAAKMYEERMKQPNPMNSETSQPHLDA-RMALLKSATNHHGQIVQG 179

Query: 188 N-SGNISTALQQIQ 200
           N  G +S ALQQIQ
Sbjct: 180 NHQGGVSAALQQIQ 193


>AT4G32551.2 | Symbols: LUG | LisH dimerisation motif;WD40/YVTN
          repeat-like-containing domain | chr4:15707863-15713359
          FORWARD LENGTH=969
          Length = 969

 Score =  158 bits (399), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 75/84 (89%)

Query: 8  AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
          +Q+NWEADKMLDVYIHDY VKR L   A+AF  EGKVS+DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2  SQTNWEADKMLDVYIHDYLVKRDLKATAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWD 61

Query: 68 IFISRTNEKHSEAAASYIETQQIK 91
          IFI+RTNEKHSE AASYIETQ IK
Sbjct: 62 IFIARTNEKHSEVAASYIETQMIK 85


>AT4G32551.1 | Symbols: LUG, RON2 | LisH dimerisation
          motif;WD40/YVTN repeat-like-containing domain |
          chr4:15707863-15713359 FORWARD LENGTH=931
          Length = 931

 Score =  158 bits (399), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 69/84 (82%), Positives = 75/84 (89%)

Query: 8  AQSNWEADKMLDVYIHDYFVKRKLHNAAKAFMTEGKVSTDPVAIDAPGGFLYEWWSVFWD 67
          +Q+NWEADKMLDVYIHDY VKR L   A+AF  EGKVS+DPVAIDAPGGFL+EWWSVFWD
Sbjct: 2  SQTNWEADKMLDVYIHDYLVKRDLKATAQAFQAEGKVSSDPVAIDAPGGFLFEWWSVFWD 61

Query: 68 IFISRTNEKHSEAAASYIETQQIK 91
          IFI+RTNEKHSE AASYIETQ IK
Sbjct: 62 IFIARTNEKHSEVAASYIETQMIK 85