Miyakogusa Predicted Gene
- Lj1g3v3458590.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3458590.1 tr|B9MZG5|B9MZG5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_595455 PE=4
SV=1,29.5,3e-18,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat; PPR:
p,CUFF.30768.1
(547 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 540 e-153
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 6e-51
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 194 1e-49
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 194 1e-49
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 4e-47
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 174 1e-43
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 4e-43
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 4e-43
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 170 2e-42
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 169 4e-42
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 5e-42
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 6e-42
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 7e-42
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 5e-41
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 6e-41
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 6e-41
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 7e-41
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 7e-41
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 164 2e-40
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 163 3e-40
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 5e-40
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 6e-40
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 3e-39
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 3e-39
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 1e-38
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 158 1e-38
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 3e-38
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 156 4e-38
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 8e-38
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 1e-37
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 2e-37
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 153 3e-37
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 8e-37
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 150 2e-36
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 3e-36
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 3e-36
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 149 4e-36
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 5e-36
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 6e-36
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 7e-36
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 8e-36
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 8e-36
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 3e-35
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 4e-35
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 5e-35
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 6e-35
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 8e-35
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 1e-34
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 3e-34
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 8e-34
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 141 1e-33
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 140 2e-33
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 139 4e-33
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 5e-33
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 5e-33
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 5e-33
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 1e-32
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 5e-32
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 135 1e-31
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 2e-31
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 3e-31
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 5e-31
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 6e-31
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 6e-31
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 5e-30
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 6e-30
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 5e-29
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 6e-29
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 125 6e-29
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 125 1e-28
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 124 1e-28
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 124 2e-28
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 4e-28
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 1e-27
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 2e-27
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 120 3e-27
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 4e-27
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 4e-26
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 4e-26
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 5e-26
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 9e-26
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 114 2e-25
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 113 4e-25
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 5e-25
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 6e-25
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 1e-24
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 3e-23
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 106 4e-23
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 4e-23
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 6e-23
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 102 7e-22
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 7e-22
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 9e-22
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 100 5e-21
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 1e-20
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 98 1e-20
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 98 1e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 5e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 6e-20
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 96 7e-20
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 6e-19
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 92 6e-19
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 92 9e-19
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 1e-18
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 89 6e-18
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 1e-17
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 85 1e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 84 2e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 84 3e-16
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 82 7e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 82 7e-16
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 81 2e-15
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 81 2e-15
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 80 4e-15
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 80 5e-15
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 79 8e-15
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 1e-14
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 78 2e-14
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 6e-14
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 75 1e-13
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 74 2e-13
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 74 3e-13
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 73 4e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 72 7e-13
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 72 7e-13
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 9e-13
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 1e-12
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 71 2e-12
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 70 3e-12
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 70 3e-12
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 70 6e-12
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 6e-12
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 69 6e-12
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 1e-11
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 68 2e-11
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 2e-11
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 66 5e-11
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-11
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 9e-11
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 65 9e-11
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 64 2e-10
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 64 2e-10
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 64 3e-10
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 7e-10
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 62 8e-10
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 62 8e-10
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 62 1e-09
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 61 2e-09
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 60 3e-09
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 60 3e-09
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 58 2e-08
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT4G21705.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G27460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 56 6e-08
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 56 7e-08
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 1e-07
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 55 2e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 54 2e-07
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 53 4e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 53 5e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 53 6e-07
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 540 bits (1391), Expect = e-153, Method: Compositional matrix adjust.
Identities = 262/505 (51%), Positives = 348/505 (68%), Gaps = 7/505 (1%)
Query: 40 LPESYTIQPPIKPWPHRLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAI 99
L + T +PPIKPWP RL PK L S+I++Q + L+LQIF +A H +H+ Y +I
Sbjct: 30 LQQYCTEKPPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSI 89
Query: 100 FLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRI 159
KLSRAR F +ESL++ L P CGE+ + +R YGLAG+ +S++R FLRI
Sbjct: 90 LFKLSRARAFDPVESLMADLRNSYPPI---KCGENLFIDLLRNYGLAGRYESSMRIFLRI 146
Query: 160 ESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVN 219
G++ SVR +QN+R L H++FKNS+ FG++PN+ +CN+L+KALCK N
Sbjct: 147 PD-FGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKN 205
Query: 220 EVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYT 279
++E A +VLDE+ MGLVPN+V+YTT++GGY RGDM+ A RVL E+LD+GW PDATTYT
Sbjct: 206 DIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYT 265
Query: 280 VLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRK 339
VL+DG+C+ GR A VMDDME+N ++PNEVTYGVMI A CK KK GEA N+ ++M+ +
Sbjct: 266 VLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLER 325
Query: 340 GHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSDNTVASTLIHWLCKKGKVLEA 398
+P S LCCKV+D LCE+ V+ AC +WR +L+ C DN + STLIHWLCK+G+V EA
Sbjct: 326 SFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEA 385
Query: 399 RNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
R +F+EFE GS+ SLLTYNTLIAG+CE+GEL EA RLWDDM E+ PNAFTYN+LI G
Sbjct: 386 RKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGL 445
Query: 459 CKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXMNQEINKVVALAMSTG-VDG 517
K GN KEG+R+LEEM E GC PNK+T+ ++ K+V++A+ G VD
Sbjct: 446 SKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK-EEDAMKIVSMAVMNGKVDK 504
Query: 518 ELWDLLVKHVVGNLDINATELDRIL 542
E W+L +K G LD L +L
Sbjct: 505 ESWELFLKKFAGELDKGVLPLKELL 529
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 199 bits (505), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 124/428 (28%), Positives = 213/428 (49%), Gaps = 9/428 (2%)
Query: 53 WPHRLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEM 112
+P L PK + L+ + +P + +F A T H +H + Y I +LS R +
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSA-TRHPGYAHSAVVYHHILRRLSETRMVNHV 62
Query: 113 ESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXX 172
++ + + C ED ++ I+ YG PD AL F R+ G P++R
Sbjct: 63 SRIVELIRSQECK-----CDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSY 117
Query: 173 XXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEML 232
V+ K+ S+F T GV+PN+ + N+L+K CK E E A LD M
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETA-GVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW 176
Query: 233 GMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLV 292
G P+V SY+TV+ A G +D A+ + E+ ++G APD T Y +L+DGF ++
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 293 AAIKVMDD-MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKV 351
A+++ D +E++ V PN T+ +MI K + + + + E M + +
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 352 VDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSV 410
+ LC+ GNV++A V+ L + S + V +T++ C+ GK+ E+ ++ E +
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS 356
Query: 411 ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRI 470
++++YN LI GL E G++ EA +W M KG A + TY + I+G C G + + +
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 471 LEEMCENG 478
++E+ +G
Sbjct: 417 MQEVESSG 424
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 146/302 (48%), Gaps = 6/302 (1%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A SVF R S +VV+ N +L C+ +++ ++ + M V N+VSY ++
Sbjct: 309 AESVFNELDER-KASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILI 366
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G G +D A + + KG+A D TTY + + G C G + A+ VM ++E +G
Sbjct: 367 KGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGH 426
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
+ Y +I+ CK K+ EA NL+++M + G +S +C ++ L + + A
Sbjct: 427 LDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFF 486
Query: 368 WRVLRKICGSDNTVAS--TLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLC 424
R + K G TV S LI LCK GK EA +E E G L TY+ L+ GLC
Sbjct: 487 LREMGK-NGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLC 545
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
++ A LW ++ G + +N+LI+G C VG + + ++ M C N
Sbjct: 546 RDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLV 605
Query: 485 TY 486
TY
Sbjct: 606 TY 607
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 141/322 (43%), Gaps = 37/322 (11%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
S N+VS NIL+K L + +++ A + M G + +Y + G G ++ A+
Sbjct: 356 SVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG 415
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ-------------- 307
V+ EV G D Y ++D C++ RL A ++ +M ++GV+
Sbjct: 416 VMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLI 475
Query: 308 ---------------------PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSG 346
P V+Y ++I CK K GEA +++M+ G P
Sbjct: 476 RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLK 535
Query: 347 LCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF 405
++ LC + ++ A E+W + L+ +D + + LIH LC GK+ +A V
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 406 EG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNA 464
E A+L+TYNTL+ G + G+ A +W M + G P+ +YN ++ G C
Sbjct: 596 EHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655
Query: 465 KEGIRILEEMCENGCLPNKSTY 486
+ ++ +G P T+
Sbjct: 656 SYAMEFFDDARNHGIFPTVYTW 677
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 132/316 (41%), Gaps = 35/316 (11%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I G + G + AL +ES G V + KR A ++ K ++
Sbjct: 401 IHGLCVNGYVNKALGVMQEVESSGG-HLDVYAYASIIDCLCKKKRLEEASNLVK-EMSKH 458
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV N CN L+ L + + + A L EM G P VVSY ++ G G A
Sbjct: 459 GVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ E+L+ GW PD TY++L+ G CR ++ A+++ ++G++ + + + ++I
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
C K +A+ ++ +M + + +++ + G+ RA +W + K+
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKM----- 633
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDM 439
G +++YNT++ GLC + A +DD
Sbjct: 634 ----------------------------GLQPDIISYNTIMKGLCMCRGVSYAMEFFDDA 665
Query: 440 VEKGRAPNAFTYNLLI 455
G P +T+N+L+
Sbjct: 666 RNHGIFPTVYTWNILV 681
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 362 ERACEVWRVLRKICGSDNTVAS--TLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNT 418
++A +V++ +R+I G + + S TL++ + + ++ ++F FE VA +L TYN
Sbjct: 95 DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154
Query: 419 LIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
LI C++ E +A D M ++G P+ F+Y+ +IN K G + + + +EM E G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 479 CLPNKSTY 486
P+ + Y
Sbjct: 215 VAPDVTCY 222
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/430 (28%), Positives = 217/430 (50%), Gaps = 11/430 (2%)
Query: 60 KLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTL 119
KLL SL S Q D +L++F A S P Y I L+L R+ F +M+ +L +
Sbjct: 52 KLLDSLRS-QPDDSAALRLFNLASKKPNFSPE-PALYEEILLRLGRSGSFDDMKKILEDM 109
Query: 120 PRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXX 179
+ G + I Y D L + G++P
Sbjct: 110 KSSRCEM-----GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLL 164
Query: 180 VQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPN 239
V +L + + +G+ P+V + N+L+KALC+ +++ A+ +L++M GLVP+
Sbjct: 165 VDGNSLKLVE-ISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPD 223
Query: 240 VVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMD 299
++TTVM GY GD+DGA+R+ ++++ G + + V+V GFC++GR+ A+ +
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQ 283
Query: 300 DME-ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEE 358
+M ++G P++ T+ ++ CK A+ +++ M+++G+ P V+ LC+
Sbjct: 284 EMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 343
Query: 359 GNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTY 416
G V+ A EV +++ + C + +TLI LCK+ +V EA + G + + T+
Sbjct: 344 GEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403
Query: 417 NTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE 476
N+LI GLC A L+++M KG P+ FTYN+LI+ C G E + +L++M
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 477 NGCLPNKSTY 486
+GC + TY
Sbjct: 464 SGCARSVITY 473
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/356 (28%), Positives = 177/356 (49%), Gaps = 3/356 (0%)
Query: 133 EDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVF 192
E T ++GY G D ALR ++ G S + R A +
Sbjct: 224 EKTFTTVMQGYIEEGDLDGALRIREQM-VEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 193 KNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
+ + G P+ + N L+ LCK V+ A+ ++D ML G P+V +Y +V+ G
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
G++ A+ VL +++ + +P+ TY L+ C++ ++ A ++ + G+ P+ T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR 372
+ +I+ C + A+ L E+M KG P ++D LC +G ++ A + + +
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 373 -KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELC 430
C +TLI CK K EA +F+E E V+ + +TYNTLI GLC+ +
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+AA+L D M+ +G+ P+ +TYN L+ FC+ G+ K+ I++ M NGC P+ TY
Sbjct: 523 DAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTY 578
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 149/293 (50%), Gaps = 4/293 (1%)
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
T G+ P+V + N L++ LC VA+ + +EM G P+ +Y ++ +G +
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
D A+ +L ++ G A TY L+DGFC+ + A ++ D+ME +GV N VTY +
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-C 375
I+ CK ++ +A L++ M+ +G P ++ C G++++A ++ + + C
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAAR 434
D TLI LCK G+V A + + G + YN +I GL + + EA
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 435 LWDDMVEKGRA-PNAFTYNLLINGFCKVGN-AKEGIRILEEMCENGCLPNKST 485
L+ +M+E+ A P+A +Y ++ G C G +E + L E+ E G +P S+
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSS 684
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 147/288 (51%), Gaps = 3/288 (1%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
SPN V+ N L+ LCK N+VE A + + G++P+V ++ +++ G + AM
Sbjct: 362 SPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAME 421
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
+ E+ KG PD TY +L+D C +G+L A+ ++ ME +G + +TY +I+ +C
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNT 380
K K EA + ++M G +S ++D LC+ VE A ++ +++ + D
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 381 VASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDM 439
++L+ C+ G + +A ++ + G ++TY TLI+GLC+ G + A++L +
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 440 VEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE-NGCLPNKSTY 486
KG YN +I G + E I + EM E N P+ +Y
Sbjct: 602 QMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSY 649
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 132/460 (28%), Positives = 228/460 (49%), Gaps = 26/460 (5%)
Query: 50 IKPWPHRLH-------PKLLASLISR-QHDPHLSLQIFRHAQTHH------RASSHHPLP 95
+K P++LH P+ ++L+ + Q+D L L+ A H + + H L
Sbjct: 32 LKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKCITLHILT 91
Query: 96 YRAIFLK---LSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLV--TAIRGYGLAGKPD 150
++ L+ ++ ++L S Q+ D C V ++ Y D
Sbjct: 92 KFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLID 151
Query: 151 SALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRH-RLAHSVFKNSRTRFGVSPNVVSCN 209
AL + + + G P V +++KR+ A +VFK VSPNV + N
Sbjct: 152 KAL-SIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFK-EMLESQVSPNVFTYN 209
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
IL++ C ++VA+ + D+M G +PNVV+Y T++ GY +D ++L + K
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G P+ +Y V+++G CR+GR+ V+ +M G +EVTY +I+ YCK +A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL--RKICGSDNTVASTLIH 387
+ + +M+R G PS ++ +C+ GN+ RA E + R +C ++ T +TL+
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTY-TTLVD 388
Query: 388 WLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
+KG + EA V E + G S++TYN LI G C G++ +A + +DM EKG +P
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSP 448
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ +Y+ +++GFC+ + E +R+ EM E G P+ TY
Sbjct: 449 DVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 197/392 (50%), Gaps = 57/392 (14%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G++P+V++ L+ ++CK + A+ LD+M GL PN +YTT++ G++ +G M+
Sbjct: 338 RHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG------------ 305
A RVL E+ D G++P TY L++G C G++ AI V++DM+E G
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457
Query: 306 -----------------------VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHV 342
++P+ +TY +I+ +C+ ++ EA +L E+M+R G
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517
Query: 343 PSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEA-RN 400
P +++ C EG++E+A ++ ++ K D S LI+ L K+ + EA R
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 401 VFEEFEGGSVASLLTYNTLI---------------AGLCERGELCEAARLWDDMVEKGRA 445
+ + F SV S +TY+TLI G C +G + EA ++++ M+ K
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 446 PNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXMNQEINK 505
P+ YN++I+G C+ G+ ++ + +EM ++G L + T +N E+N
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVN-ELNS 696
Query: 506 VVALAMSTG--VDGELWDLLVK--HVVGNLDI 533
V+ + + + E +LV+ H GN+D+
Sbjct: 697 VIVHVLRSCELSEAEQAKVLVEINHREGNMDV 728
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/392 (29%), Positives = 177/392 (45%), Gaps = 60/392 (15%)
Query: 146 AGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNV 205
AG + A+ ++ R G+ P+ R Q A+ V + G SP+V
Sbjct: 358 AGNMNRAMEFLDQMRVR-GLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN-GFSPSV 415
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGE 265
V+ N L+ C ++E A+ VL++M GL P+VVSY+TV+ G+ D+D A+RV E
Sbjct: 416 VTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKRE 475
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK 325
+++KG PD TY+ L+ GFC Q R A + ++M G+ P+E TY +I AYC
Sbjct: 476 MVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGD 535
Query: 326 PGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-----CGSDNT 380
+A+ L +MV KG +P +++ L ++ R E R+L K+ SD T
Sbjct: 536 LEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQS---RTREAKRLLLKLFYEESVPSDVT 592
Query: 381 VAS--------------TLIHWLCKKGKVLEARNVFEEFEGGSVASLLT-YNTLIAGLCE 425
+ +LI C KG + EA VFE G + T YN +I G C
Sbjct: 593 YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCR 652
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG----------------------- 462
G++ +A L+ +MV+ G + T L+ K G
Sbjct: 653 AGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQ 712
Query: 463 -------NAKEG-----IRILEEMCENGCLPN 482
N +EG + +L EM ++G LPN
Sbjct: 713 AKVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 146/316 (46%), Gaps = 35/316 (11%)
Query: 188 AHSVFKNSRTRFGVSPNVVSC-NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTV 246
A VFK+ + + + + S ++++K+ +++ ++ A+ ++ G +P V+SY V
Sbjct: 116 ASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAV 175
Query: 247 MGGYA-WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
+ + ++ A V E+L+ +P+ TY +L+ GFC G + A+ + D ME G
Sbjct: 176 LDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG 235
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERAC 365
PN VTY +I+ YCK +K + LL M KG P+ V++ LC EG R
Sbjct: 236 CLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREG---RMK 292
Query: 366 EVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCE 425
EV VL + + ++G L+ +TYNTLI G C+
Sbjct: 293 EVSFVLTE---------------MNRRGYSLDE---------------VTYNTLIKGYCK 322
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
G +A + +M+ G P+ TY LI+ CK GN + L++M G PN+ T
Sbjct: 323 EGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERT 382
Query: 486 YXXXXXXXXXXXXMNQ 501
Y MN+
Sbjct: 383 YTTLVDGFSQKGYMNE 398
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 185/354 (52%), Gaps = 7/354 (1%)
Query: 135 PLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKN 194
P T IRG+ GK A + L I G P V + A SV
Sbjct: 139 PCTTLIRGFCRLGKTRKAAK-ILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLD- 196
Query: 195 SRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRG 254
R VSP+VV+ N +L++LC +++ A+ VLD ML P+V++YT ++
Sbjct: 197 ---RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDS 253
Query: 255 DMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYG 314
+ AM++L E+ D+G PD TY VLV+G C++GRL AIK ++DM +G QPN +T+
Sbjct: 254 GVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN 313
Query: 315 VMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RK 373
+++ + C + +A LL DM+RKG PS +++ LC +G + RA ++ + +
Sbjct: 314 IILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH 373
Query: 374 ICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEA 432
C ++ + L+H CK+ K+ A E G ++TYNT++ LC+ G++ +A
Sbjct: 374 GCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDA 433
Query: 433 ARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ + + KG +P TYN +I+G K G + I++L+EM P+ TY
Sbjct: 434 VEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITY 487
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 152/289 (52%), Gaps = 5/289 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P+++ C L++ C++ + A ++L+ + G G VP+V++Y ++ GY G+++ A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ VL + +PD TY ++ C G+L A++V+D M + P+ +TY ++IEA
Sbjct: 192 LSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
C+ G A+ LL++M +G P +V+ +C+EG ++ A + + N
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPN 308
Query: 380 TVASTLI-HWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ +I +C G+ ++A + + G S++T+N LI LC +G L A + +
Sbjct: 309 VITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILE 368
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M + G PN+ +YN L++GFCK I LE M GC P+ TY
Sbjct: 369 KMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTY 417
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 93/322 (28%), Positives = 158/322 (49%), Gaps = 37/322 (11%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G +P+VV+ N+L+ +CK ++ A++ L++M G PNV+++ ++ G A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++L ++L KG++P T+ +L++ CR+G L AI +++ M ++G QPN ++Y ++
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR------- 372
+CK KK A+ LE MV +G P ++ LC++G VE A E+ L
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 373 -----------------------------KICGSDNTVASTLIHWLCKKGKVLEARNVFE 403
K D S+L+ L ++GKV EA F
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 404 EFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
EFE G + +T+N+++ GLC+ + A M+ +G PN +Y +LI G G
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 463 NAKEGIRILEEMCENGCLPNKS 484
AKE + +L E+C G + S
Sbjct: 569 MAKEALELLNELCNKGLMKKSS 590
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 150/283 (53%), Gaps = 5/283 (1%)
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGE 265
V N L+ + + E+E + L+ M+ G VP+++ TT++ G+ G A ++L
Sbjct: 103 VESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEI 162
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK 325
+ G PD TY V++ G+C+ G + A+ V+D M V P+ VTY ++ + C K
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGK 219
Query: 326 PGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICGSDNTVAST 384
+A+ +L+ M+++ P +++ C + V A ++ +R + C D +
Sbjct: 220 LKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNV 279
Query: 385 LIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKG 443
L++ +CK+G++ EA + G +++T+N ++ +C G +A +L DM+ KG
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 444 RAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+P+ T+N+LIN C+ G I ILE+M ++GC PN +Y
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 110/231 (47%), Gaps = 7/231 (3%)
Query: 115 LLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXX 174
+L +P+H Q + +PL + G+ K D A+ R+ SR G P +
Sbjct: 366 ILEKMPQHGCQP--NSLSYNPL---LHGFCKEKKMDRAIEYLERMVSR-GCYPDIVTYNT 419
Query: 175 XXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGM 234
++ + A + N + G SP +++ N ++ L K + A+++LDEM
Sbjct: 420 MLTALCKDGKVEDAVEIL-NQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK 478
Query: 235 GLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAA 294
L P+ ++Y++++GG + G +D A++ E G P+A T+ ++ G C+ + A
Sbjct: 479 DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRA 538
Query: 295 IKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSS 345
I + M G +PNE +Y ++IE EA+ LL ++ KG + S
Sbjct: 539 IDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKS 589
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/508 (26%), Positives = 229/508 (45%), Gaps = 59/508 (11%)
Query: 57 LHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLL 116
L PK + ++I Q DP +L++F ++ H YR++ KL F ME +L
Sbjct: 5 LLPKHVTAVIKCQKDPMKALEMF-NSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 63
Query: 117 STLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXX 176
+ + L E V A++ YG GK A+ F R++ P+V
Sbjct: 64 VDMRENVGNHML----EGVYVGAMKNYGRKGKVQEAVNVFERMDF-YDCEPTVFSYNAIM 118
Query: 177 XXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGL 236
V + AH V+ R R G++P+V S I +K+ CK + A+R+L+ M G
Sbjct: 119 SVLVDSGYFDQAHKVYMRMRDR-GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGC 177
Query: 237 VPNVVSYTTVMGGY-----------------------------------AWRGDMDGAMR 261
NVV+Y TV+GG+ +GD+ +
Sbjct: 178 EMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEK 237
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
+L +V+ +G P+ TY + + G C++G L A++++ + E G +P+ +TY +I C
Sbjct: 238 LLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLC 297
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS---- 377
K K EA L MV +G P S ++ C+ G V+ A +I G
Sbjct: 298 KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA-------ERIVGDAVFN 350
Query: 378 ----DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEA 432
D +LI LC +G+ A +F E G + +++ YNTLI GL +G + EA
Sbjct: 351 GFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEA 410
Query: 433 ARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXX 492
A+L ++M EKG P T+N+L+NG CK+G + +++ M G P+ T+
Sbjct: 411 AQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHG 470
Query: 493 XXXXXXMNQEINKVVALAMSTGVDGELW 520
M + +++ + + GVD +++
Sbjct: 471 YSTQLKMENAL-EILDVMLDNGVDPDVY 497
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 167/339 (49%), Gaps = 34/339 (10%)
Query: 147 GKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVV 206
G+ + AL F + GI+P+V + N+ L + N + G+ P V
Sbjct: 370 GETNRALALFNEALGK-GIKPNV-ILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+ NIL+ LCK+ V A ++ M+ G P++ ++ ++ GY+ + M+ A+ +L +
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
LD G PD TY L++G C+ + ++ M E G PN T+ +++E+ C+++K
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLI 386
EA+ LLE+M K P + ++D C+ G+++ A ++R
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFR----------------- 590
Query: 387 HWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
K+ EA V +S TYN +I E+ + A +L+ +MV++ P
Sbjct: 591 -------KMEEAYKV--------SSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGP 635
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+ +TY L+++GFCK GN G + L EM ENG +P+ +T
Sbjct: 636 DGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTT 674
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 146/289 (50%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P+V++ N L+ LCK ++ + A L +M+ GL P+ +Y T++ GY G + A
Sbjct: 281 GPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLA 340
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
R++G+ + G+ PD TY L+DG C +G A+ + ++ G++PN + Y +I+
Sbjct: 341 ERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKG 400
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSD 378
EA L +M KG +P +V+ LC+ G V A + +V+ K D
Sbjct: 401 LSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 379 NTVASTLIHWLCKKGKVLEARNVFE-EFEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ LIH + K+ A + + + G + TYN+L+ GLC+ + + +
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
MVEKG APN FT+N+L+ C+ E + +LEEM P+ T+
Sbjct: 521 TMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTF 569
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 116/261 (44%), Gaps = 44/261 (16%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I GY K ++AL L + G+ P V + + +K +
Sbjct: 468 IHGYSTQLKMENALE-ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK- 525
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G +PN+ + NILL++LC+ +++ A+ +L+EM + P+ V++ T++ G+ GD+DGA
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 260 M------------------------------------RVLGEVLDKGWAPDATTYTVLVD 283
++ E++D+ PD TY ++VD
Sbjct: 586 YTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVD 645
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVP 343
GFC+ G + K + +M ENG P+ T G +I C + EA ++ MV+KG VP
Sbjct: 646 GFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVP 705
Query: 344 SSGLCCKVVDVLCEEGNVERA 364
+ V+ +C+ E A
Sbjct: 706 EA------VNTICDVDKKEVA 720
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 76/154 (49%), Gaps = 8/154 (5%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A+++F+ + VS + + NI++ A + V +A ++ EM+ L P+ +Y ++
Sbjct: 585 AYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G+ G+++ + L E+++ G+ P TT +++ C + R+ A ++ M + G+
Sbjct: 645 DGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVN--LLEDMVRK 339
P V C K A +LED+++K
Sbjct: 705 PEAVN------TICDVDKKEVAAPKLVLEDLLKK 732
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/416 (28%), Positives = 201/416 (48%), Gaps = 16/416 (3%)
Query: 74 LSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGE 133
L+L F+ + + H PL + + KL+ +++S+ L + Q F HC E
Sbjct: 58 LALHFFK-SIANSNLFKHTPLTFEVMIRKLAMD---GQVDSVQYLLQQMKLQGF--HCSE 111
Query: 134 DPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFK 193
D ++ I Y G + A+ F RI+ G PSV+ + R ++ + V++
Sbjct: 112 DLFISVISVYRQVGLAERAVEMFYRIK-EFGCDPSVKIYNHVLDTLLGENRIQMIYMVYR 170
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
+ + R G PNV + N+LLKALCK N+V+ A ++L EM G P+ VSYTTV+
Sbjct: 171 DMK-RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEV 229
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
G + G L + + P + Y L++G C++ A ++M +M E G+ PN ++Y
Sbjct: 230 GLVKE-----GRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISY 284
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLR 372
+I C + A + L M+++G P+ +V G A ++W +++R
Sbjct: 285 STLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIR 344
Query: 373 KICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELC 430
N VA +TL+ C G +++A +VF E G ++ TY +LI G +RG L
Sbjct: 345 GFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLD 404
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A +W+ M+ G PN Y ++ C+ KE ++E M + C P+ T+
Sbjct: 405 GAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTF 460
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 152/312 (48%), Gaps = 39/312 (12%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEML--------------------------- 232
G+SPNV+S + L+ LC ++E+A L +ML
Sbjct: 276 GISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDA 335
Query: 233 ---------GMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVD 283
G GL PNVV+Y T++ G+ G++ A+ V + + G +P+ TY L++
Sbjct: 336 LDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLIN 395
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVP 343
GF ++G L A+ + + M +G PN V Y M+EA C+ K EA +L+E M ++ P
Sbjct: 396 GFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP 455
Query: 344 SSGLCCKVVDVLCEEGNVERACEVWRVLRKI--CGSDNTVASTLIHWLCKKGKVLEARNV 401
S + LC+ G ++ A +V+R + + C + + L+ L K ++ EA +
Sbjct: 456 SVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGL 515
Query: 402 FEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCK 460
E F G S TYNTL+ G C G A +L M+ G++P+ T N++I +CK
Sbjct: 516 TREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCK 575
Query: 461 VGNAKEGIRILE 472
G A+ ++L+
Sbjct: 576 QGKAERAAQMLD 587
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 128/300 (42%), Gaps = 40/300 (13%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
FG+ PNVV+ N L++ C + AV V M +G PN+ +Y +++ G+A RG +DG
Sbjct: 346 FGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDG 405
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQ------------------------------ 288
A+ + ++L G P+ YT +V+ CR
Sbjct: 406 AVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIK 465
Query: 289 -----GRLVAAIKVMDDMEENG-VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHV 342
GRL A KV ME+ PN VTY +++ K + EA L ++ +G
Sbjct: 466 GLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVE 525
Query: 343 PSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNV 401
SS ++ C G A + V +++ D + +I CK+GK A +
Sbjct: 526 WSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Query: 402 FEEFEGGSVA---SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
+ G +++Y +I GLC + L + M+ G P+ T+++LIN F
Sbjct: 586 LDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF 645
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 110/252 (43%), Gaps = 27/252 (10%)
Query: 95 PYRAIFLKLSRARC----FPEMESLLSTLPRHSPQQFLDHCGED-PLVTA-IRGYGLAGK 148
P ++ + A C F E ESL+ + + ++C P A I+G AG+
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSK-------ENCAPSVPTFNAFIKGLCDAGR 472
Query: 149 PDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSC 208
D A + F ++E + P++ + R A+ + + R GV + +
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR-GVEWSSSTY 531
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL- 267
N LL C +A++++ +M+ G P+ ++ ++ Y +G + A ++L V
Sbjct: 532 NTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSC 591
Query: 268 -DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
+ W PD +YT ++ G CR + +++ M G+ P+ T+ V+I +
Sbjct: 592 GRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCF------ 645
Query: 327 GEAVNLLEDMVR 338
+L+D+VR
Sbjct: 646 -----ILDDIVR 652
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/362 (30%), Positives = 182/362 (50%), Gaps = 11/362 (3%)
Query: 133 EDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVF 192
E + R YG A PD A+ F R+ + SV+ + + +
Sbjct: 112 ERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFY 171
Query: 193 K---NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGG 249
NS +SPN +S N+++KALCK+ V+ A+ V M +P+ +Y T+M G
Sbjct: 172 DYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDG 231
Query: 250 YAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
+D A+ +L E+ +G +P Y VL+DG C++G L K++D+M G PN
Sbjct: 232 LCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPN 291
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
EVTY +I C K +AV+LLE MV +P+ +++ L ++ RA + R
Sbjct: 292 EVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQ---RRATDAVR 348
Query: 370 VLRKICGS----DNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLC 424
+L + + + S LI L K+GK EA +++ + E G +++ Y+ L+ GLC
Sbjct: 349 LLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLC 408
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
G+ EA + + M+ G PNA+TY+ L+ GF K G +E +++ +EM + GC NK
Sbjct: 409 REGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKF 468
Query: 485 TY 486
Y
Sbjct: 469 CY 470
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 151/291 (51%), Gaps = 5/291 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G PN V+ N L+ LC +++ AV +L+ M+ +PN V+Y T++ G + A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+R+L + ++G+ + Y+VL+ G ++G+ A+ + M E G +PN V Y V+++
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSD 378
C+ KP EA +L M+ G +P++ ++ + G E A +VW+ + K C +
Sbjct: 407 LCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
S LI LC G+V EA V+ + G + Y+++I GLC G + A +L+
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYH 526
Query: 438 DMV---EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+M+ E P+ TYN+L++G C + + +L M + GC P+ T
Sbjct: 527 EMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 139/278 (50%), Gaps = 6/278 (2%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PN V+ L+ L K AVR+L M G N Y+ ++ G G + AM +
Sbjct: 325 PNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSL 384
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
++ +KG P+ Y+VLVDG CR+G+ A ++++ M +G PN TY +++ + K
Sbjct: 385 WRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFK 444
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
EAV + ++M + G + ++D LC G V+ A VW + I +TVA
Sbjct: 445 TGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVA 504
Query: 383 -STLIHWLCKKGKVLEARNVFEEF----EGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
S++I LC G + A ++ E E S ++TYN L+ GLC + ++ A L +
Sbjct: 505 YSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLN 564
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNA-KEGIRILEEM 474
M+++G P+ T N +N + N+ +G LEE+
Sbjct: 565 SMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEEL 602
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 125/266 (46%), Gaps = 19/266 (7%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G PN+V ++L+ LC+ + A +L+ M+ G +PN +Y+++M G+ G + A
Sbjct: 392 GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++V E+ G + + Y+VL+DG C GR+ A+ V M G++P+ V Y +I+
Sbjct: 452 VQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKG 511
Query: 320 YCKWKKPGEAVNLLEDMV---RKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKIC 375
C A+ L +M+ P ++D LC + ++ RA ++ +L + C
Sbjct: 512 LCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGC 571
Query: 376 GSDNTVASTLIHWLCKKGKVLE-ARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAAR 434
D +T ++ L +K + R+ EE L+ L +R + A
Sbjct: 572 DPDVITCNTFLNTLSEKSNSCDKGRSFLEE--------------LVVRLLKRQRVSGACT 617
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCK 460
+ + M+ K AP T+ +++ CK
Sbjct: 618 IVEVMLGKYLAPKTSTWAMIVREICK 643
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 160/291 (54%), Gaps = 2/291 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G+ PN ++ LC++ ++ A EM+ G++P+ V YTT++ G+ RGD+
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A + E+ + PD TYT ++ GFC+ G +V A K+ +M G++P+ VT+ +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
YCK +A + M++ G P+ ++D LC+EG+++ A E+ + KI
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 378 DNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARL 435
N +++++ LCK G + EA + EFE + A +TY TL+ C+ GE+ +A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M+ KG P T+N+L+NGFC G ++G ++L M G PN +T+
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 175/351 (49%), Gaps = 4/351 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T + GY G+ D + + + R G++P+ + + A F +
Sbjct: 286 TVVNGYCRFGELDKVWK-LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF-SEMI 343
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G+ P+ V L+ CK ++ A + EM + P+V++YT ++ G+ GDM
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ E+ KG PD+ T+T L++G+C+ G + A +V + M + G PN VTY +I
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICG 376
+ CK A LL +M + G P+ +V+ LC+ GN+E A + V
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARL 435
+D +TL+ CK G++ +A+ + +E G G +++T+N L+ G C G L + +L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ M+ KG APNA T+N L+ +C N K I ++MC G P+ TY
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 155/304 (50%), Gaps = 4/304 (1%)
Query: 186 RLAHSVFKNSRTRFGVSPNVVSCNILLKALCK-VNEVEVAVRVLDEMLGMGLVPNVVSYT 244
R A VF+ +G+ +V SCN+ L L K + A+ V E +G+ NV SY
Sbjct: 192 REARRVFEK-MLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 245 TVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN 304
V+ G + A +L + KG+ PD +Y+ +V+G+CR G L K+++ M+
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 305 GVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
G++PN YG +I C+ K EA +M+R+G +P + + ++D C+ G++ A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 365 CEVWRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAG 422
+ + + + D + +I C+ G ++EA +F E F G +T+ LI G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 423 LCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
C+ G + +A R+ + M++ G +PN TY LI+G CK G+ +L EM + G PN
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 483 KSTY 486
TY
Sbjct: 491 IFTY 494
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 146/286 (51%), Gaps = 2/286 (0%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
N + G SPNVV+ L+ LCK +++ A +L EM +GL PN+ +Y +++ G
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
G+++ A++++GE G D TYT L+D +C+ G + A +++ +M G+QP VT+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLR 372
V++ +C + LL M+ KG P++ +V C N++ A +++ +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 373 KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCE 431
+ G D L+ CK + EA +F+E +G G S+ TY+ LI G +R + E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCEN 477
A ++D M +G A + ++ + K + ++E+ EN
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 169/353 (47%), Gaps = 6/353 (1%)
Query: 137 VTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSR 196
T I G+ G +A + F + SR I P V Q A +F
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
+ G+ P+ V+ L+ CK ++ A RV + M+ G PNVV+YTT++ G GD+
Sbjct: 414 CK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
D A +L E+ G P+ TY +V+G C+ G + A+K++ + E G+ + VTY +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV--WRVLRKI 374
++AYCK + +A +L++M+ KG P+ +++ C G +E ++ W +L K
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW-MLAKG 591
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAA 433
+ T ++L+ C + + A ++++ V TY L+ G C+ + EA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L+ +M KG + + TY++LI GF K E + ++M G +K +
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/291 (31%), Positives = 160/291 (54%), Gaps = 2/291 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G+ PN ++ LC++ ++ A EM+ G++P+ V YTT++ G+ RGD+
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A + E+ + PD TYT ++ GFC+ G +V A K+ +M G++P+ VT+ +I
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
YCK +A + M++ G P+ ++D LC+EG+++ A E+ + KI
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 378 DNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARL 435
N +++++ LCK G + EA + EFE + A +TY TL+ C+ GE+ +A +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M+ KG P T+N+L+NGFC G ++G ++L M G PN +T+
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTF 599
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 104/351 (29%), Positives = 175/351 (49%), Gaps = 4/351 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T + GY G+ D + + + R G++P+ + + A F +
Sbjct: 286 TVVNGYCRFGELDKVWK-LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF-SEMI 343
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G+ P+ V L+ CK ++ A + EM + P+V++YT ++ G+ GDM
Sbjct: 344 RQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMV 403
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ E+ KG PD+ T+T L++G+C+ G + A +V + M + G PN VTY +I
Sbjct: 404 EAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICG 376
+ CK A LL +M + G P+ +V+ LC+ GN+E A + V
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARL 435
+D +TL+ CK G++ +A+ + +E G G +++T+N L+ G C G L + +L
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ M+ KG APNA T+N L+ +C N K I ++MC G P+ TY
Sbjct: 584 LNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTY 634
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 155/304 (50%), Gaps = 4/304 (1%)
Query: 186 RLAHSVFKNSRTRFGVSPNVVSCNILLKALCK-VNEVEVAVRVLDEMLGMGLVPNVVSYT 244
R A VF+ +G+ +V SCN+ L L K + A+ V E +G+ NV SY
Sbjct: 192 REARRVFEK-MLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYN 250
Query: 245 TVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN 304
V+ G + A +L + KG+ PD +Y+ +V+G+CR G L K+++ M+
Sbjct: 251 IVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRK 310
Query: 305 GVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
G++PN YG +I C+ K EA +M+R+G +P + + ++D C+ G++ A
Sbjct: 311 GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
Query: 365 CEVWRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAG 422
+ + + + D + +I C+ G ++EA +F E F G +T+ LI G
Sbjct: 371 SKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELING 430
Query: 423 LCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
C+ G + +A R+ + M++ G +PN TY LI+G CK G+ +L EM + G PN
Sbjct: 431 YCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490
Query: 483 KSTY 486
TY
Sbjct: 491 IFTY 494
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 146/286 (51%), Gaps = 2/286 (0%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
N + G SPNVV+ L+ LCK +++ A +L EM +GL PN+ +Y +++ G
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
G+++ A++++GE G D TYT L+D +C+ G + A +++ +M G+QP VT+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLR 372
V++ +C + LL M+ KG P++ +V C N++ A +++ +
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624
Query: 373 KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCE 431
+ G D L+ CK + EA +F+E +G G S+ TY+ LI G +R + E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCEN 477
A ++D M +G A + ++ + K + ++E+ EN
Sbjct: 685 AREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 169/353 (47%), Gaps = 6/353 (1%)
Query: 137 VTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSR 196
T I G+ G +A + F + SR I P V Q A +F
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
+ G+ P+ V+ L+ CK ++ A RV + M+ G PNVV+YTT++ G GD+
Sbjct: 414 CK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
D A +L E+ G P+ TY +V+G C+ G + A+K++ + E G+ + VTY +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 532
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV--WRVLRKI 374
++AYCK + +A +L++M+ KG P+ +++ C G +E ++ W +L K
Sbjct: 533 MDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW-MLAKG 591
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAA 433
+ T ++L+ C + + A ++++ V TY L+ G C+ + EA
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L+ +M KG + + TY++LI GF K E + ++M G +K +
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/292 (32%), Positives = 155/292 (53%), Gaps = 4/292 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G PN+V+ + LL C + AV ++D+M G PN V++ T++ G
Sbjct: 144 KLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKAS 203
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
AM ++ ++ KG PD TY V+V+G C++G A +++ ME+ ++P + Y +I
Sbjct: 204 EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTII 263
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKIC 375
+ CK+K +A+NL ++M KG P+ ++ LC G A + + RKI
Sbjct: 264 DGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKI- 322
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAAR 434
D S LI K+GK++EA +++E S+ S++TY++LI G C L EA +
Sbjct: 323 NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQ 382
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+++ MV K P+ TYN LI GFCK +EG+ + EM + G + N TY
Sbjct: 383 MFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 184/359 (51%), Gaps = 4/359 (1%)
Query: 131 CGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLG-IRPSVRXXXXXXXXXVQNKRHRLAH 189
C D + + GL + D+ L L + G + P V + K A
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 190 SVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGG 249
++FK T+ G+ PNVV+ + L+ LC A R+L +M+ + P+V +++ ++
Sbjct: 277 NLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 250 YAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
+ G + A ++ E++ + P TY+ L++GFC RL A ++ + M P+
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
VTY +I+ +CK+K+ E + + +M ++G V ++ ++ L + G+ + A E+++
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFK 455
Query: 370 VLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERG 427
+ N + +TL+ LCK GK+ +A VFE + + ++ TYN +I G+C+ G
Sbjct: 456 EMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAG 515
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ + L+ ++ KG P+ YN +I+GFC+ G+ +E + +EM E+G LPN Y
Sbjct: 516 KVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCY 574
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 160/289 (55%), Gaps = 8/289 (2%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+++ + LL A+ K+N+ +V + + ++M +G+ N +Y+ ++ + R + A+ V
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAV 138
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG+++ G+ P+ T + L++G+C R+ A+ ++D M G QPN VT+ +I
Sbjct: 139 LGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFL 198
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD---- 378
K EA+ L++ MV KG P VV+ LC+ G+ + A + +L K+
Sbjct: 199 HNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA---FNLLNKMEQGKLEPG 255
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWD 437
+ +T+I LCK + +A N+F+E E + +++TY++LI+ LC G +A+RL
Sbjct: 256 VLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLS 315
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
DM+E+ P+ FT++ LI+ F K G E ++ +EM + P+ TY
Sbjct: 316 DMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 364
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 171/339 (50%), Gaps = 6/339 (1%)
Query: 150 DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCN 209
D AL F +E++ GIRP+V R A + + R ++P+V + +
Sbjct: 273 DDALNLFKEMETK-GIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVFTFS 330
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
L+ A K ++ A ++ DEM+ + P++V+Y++++ G+ +D A ++ ++ K
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK 390
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
PD TY L+ GFC+ R+ ++V +M + G+ N VTY ++I+ + A
Sbjct: 391 HCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAS--TLIH 387
+ ++MV G P+ ++D LC+ G +E+A V+ L++ + T+ + +I
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKMEPTIYTYNIMIE 509
Query: 388 WLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
+CK GKV + ++F G ++ YNT+I+G C +G EA L+ +M E G P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
N+ YN LI + G+ + +++EM G + ST
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 608
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 136/269 (50%), Gaps = 2/269 (0%)
Query: 220 EVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYT 279
+++ AV + EM+ P+++ ++ ++ A D + + ++ + G + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 280 VLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRK 339
+L++ FCR+ +L A+ V+ M + G +PN VT ++ YC K+ EAV L++ M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 340 GHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHWLCKKGKVLEA 398
G+ P++ ++ L A + R++ K C D +++ LCK+G A
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 399 RNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
N+ + E G + +L YNT+I GLC+ + +A L+ +M KG PN TY+ LI+
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 458 FCKVGNAKEGIRILEEMCENGCLPNKSTY 486
C G + R+L +M E P+ T+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTF 329
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 116/255 (45%), Gaps = 35/255 (13%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+VV+ N L+K CK VE + V EM GLV N V+Y ++ G GD D A +
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEI 453
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
E++ G P+ TY L+DG C+ G+L A+ V + ++ + ++P TY +MIE CK
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K + +L ++ KG P D
Sbjct: 514 AGKVEDGWDLFCNLSLKGVKP----------------------------------DVVAY 539
Query: 383 STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+T+I C+KG EA +F+E E G++ + YNTLI G+ +A L +M
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 599
Query: 442 KGRAPNAFTYNLLIN 456
G A +A T L+ N
Sbjct: 600 CGFAGDASTIGLVTN 614
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 2/177 (1%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I+G AG D A F + S G+ P++ +N + A VF+ + R
Sbjct: 438 IQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ-RS 495
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
+ P + + NI+++ +CK +VE + + G+ P+VV+Y T++ G+ +G + A
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
+ E+ + G P++ Y L+ R G A+ +++ +M G + T G++
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 110/347 (31%), Positives = 181/347 (52%), Gaps = 6/347 (1%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+SPN + N L+K CK N V A+ VL++ML ++P+VV+Y +++ G G+ D A
Sbjct: 424 LSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
R+L + D+G PD TYT ++D C+ R+ A + D +E+ GV PN V Y +I+ Y
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
CK K EA +LE M+ K +P+S ++ LC +G ++ A + + KI G T
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI-GLQPT 601
Query: 381 VA--STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
V+ + LIH L K G A + F++ G+ TY T I C G L +A +
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXX 497
M E G +P+ FTY+ LI G+ +G +L+ M + GC P++ T+
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Query: 498 XMNQEINKVVALAMSTGVDGE-LWDLLVKHVVGNLDINATELDRILI 543
Q+ ++ AMS ++ + + +LL K V ++ NA +++++
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLIL 768
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 164/316 (51%), Gaps = 19/316 (6%)
Query: 189 HSVFKNSRTRFG----------------VSPNVVSCNILLKALCKVNEVEVAVRVLDEML 232
++ NS RFG V PN+ + N ++ CK+ VE A + + +++
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 233 GMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLV 292
GL P+ +YT+++ GY R D+D A +V E+ KG + YT L+ G C R+
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305
Query: 293 AAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVV 352
A+ + M+++ P TY V+I++ C ++ EA+NL+++M G P+ ++
Sbjct: 306 EAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI 365
Query: 353 DVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA 411
D LC + E+A E+ ++L K + + LI+ CK+G + +A +V E E ++
Sbjct: 366 DSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLS 425
Query: 412 -SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRI 470
+ TYN LI G C + + +A + + M+E+ P+ TYN LI+G C+ GN R+
Sbjct: 426 PNTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Query: 471 LEEMCENGCLPNKSTY 486
L M + G +P++ TY
Sbjct: 485 LSLMNDRGLVPDQWTY 500
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 20/298 (6%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+ + ++ +LCK VE A + D + G+ PNVV YT ++ GY G +D A
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+L ++L K P++ T+ L+ G C G+L A + + M + G+QP T ++I
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHR 611
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-D 378
K A + + M+ G P + + C EG + A ++ +R+ S D
Sbjct: 612 LLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCE------RG---E 428
S+LI G+ A +V + + G S T+ +LI L E +G E
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 429 LCEAA---------RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCEN 477
LC + L + MVE PNA +Y LI G C+VGN + ++ + M N
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRN 789
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 161/368 (43%), Gaps = 23/368 (6%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I GY AGK D A ++ S+ + S+ K ++ + +
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE--ATLLEEKMVKI 596
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P V + IL+ L K + + A +ML G P+ +YTT + Y G + A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE- 318
++ ++ + G +PD TY+ L+ G+ G+ A V+ M + G +P++ T+ +I+
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKH 716
Query: 319 ----AYCKWK-------------KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
Y K K + V LLE MV P++ K++ +CE GN+
Sbjct: 717 LLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNL 776
Query: 362 ERACEVWRVLRKICG--SDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNT 418
A +V+ +++ G V + L+ CK K EA V ++ G + L +
Sbjct: 777 RVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKV 836
Query: 419 LIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
LI GL ++GE ++ ++++ G + + ++I+G K G + + M +NG
Sbjct: 837 LICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Query: 479 CLPNKSTY 486
C + TY
Sbjct: 897 CKFSSQTY 904
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 137/331 (41%), Gaps = 56/331 (16%)
Query: 147 GKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVV 206
G D A F ++ S G +P + R A + R GVSP++
Sbjct: 616 GDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMREN-GVSPDLF 673
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTV------MGGYAWRG------ 254
+ + L+K + + A VL M G P+ ++ ++ M +G
Sbjct: 674 TYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELC 733
Query: 255 ------DMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN-GVQ 307
+ D + +L ++++ P+A +Y L+ G C G L A KV D M+ N G+
Sbjct: 734 AMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGIS 793
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P+E+ + ++ CK KK EA +++DM+ GH+P CKV+
Sbjct: 794 PSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLE-SCKVL--------------- 837
Query: 368 WRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCER 426
ICG L KKG+ +VF+ + G L + +I G+ ++
Sbjct: 838 ------ICG------------LYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQ 879
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLING 457
G + L++ M + G ++ TY+LLI G
Sbjct: 880 GLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 156/292 (53%), Gaps = 4/292 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P++V+ N LL C N + AV ++D+M+ MG P+ V++TT++ G
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ ++ +G PD TY +V+G C++G A+ +++ ME ++ N V Y +I
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKIC 375
++ CK++ +A+NL +M KG P+ ++ LC G A + + RKI
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI- 319
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAAR 434
+ S LI KKGK+++A ++EE S+ ++ TY++LI G C L EA +
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ + M+ K PN TYN LINGFCK +G+ + EM + G + N TY
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTY 431
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 170/334 (50%), Gaps = 4/334 (1%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNS 195
T I G L K A+ R+ R G +P + + LA ++ N
Sbjct: 186 FTTLIHGLFLHNKASEAVALIDRMVQR-GCQPDLVTYGAVVNGLCKRGDTDLALNLL-NK 243
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
+ NVV + ++ +LCK + A+ + EM G+ PNV++Y++++ G
Sbjct: 244 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGR 303
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
A R+L +++++ P+ T++ L+D F ++G+LV A K+ ++M + + PN TY
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKIC 375
+I +C + GEA +LE M+RK +P+ +++ C+ V++ E++R + +
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 376 GSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAA 433
NTV +TLIH + A+ VF++ V ++LTYN L+ GLC+ G+L +A
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEG 467
+++ + P+ +TYN++I G CK G K G
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 157/290 (54%), Gaps = 2/290 (0%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G+S N+ + NIL+ C+ + + +A+ +L +M+ +G P++V+ +++ G+ +
Sbjct: 107 LGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISD 166
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+ ++ ++++ G+ PD T+T L+ G + A+ ++D M + G QP+ VTYG ++
Sbjct: 167 AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
CK A+NLL M + + V+D LC+ + + A ++ +
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRP 286
Query: 379 NTVA-STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLW 436
N + S+LI LC G+ +A + + E +L+T++ LI ++G+L +A +L+
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++M+++ PN FTY+ LINGFC + E ++LE M CLPN TY
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTY 396
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 154/286 (53%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+++ + LL A+ K+N+ ++ + ++M +G+ N+ +Y ++ + + A+ +
Sbjct: 76 PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALAL 135
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG+++ G+ PD T L++GFC R+ A+ ++D M E G +P+ VT+ +I
Sbjct: 136 LGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFL 195
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K EAV L++ MV++G P VV+ LC+ G+ + A + + N V
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 383 -STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMV 440
ST+I LCK +A N+F E E V +++TY++LI+ LC G +A+RL DM+
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
E+ PN T++ LI+ F K G + ++ EEM + PN TY
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P++V+ ++ LCK + ++A+ +L++M + NVV Y+TV+ D A
Sbjct: 213 GCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDA 272
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + E+ +KG P+ TY+ L+ C GR A +++ DM E + PN VT+ +I+A
Sbjct: 273 LNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDA 332
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSD 378
+ K K +A L E+M+++ P+ +++ C + A ++ ++ RK C +
Sbjct: 333 FVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPN 392
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+TLI+ CK +V + +F E + G V + +TY TLI G + + A ++
Sbjct: 393 VVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 452
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
MV G PN TYN+L++G CK G + + + E + + P+ TY
Sbjct: 453 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTY 501
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 213/447 (47%), Gaps = 23/447 (5%)
Query: 53 WPHRLHPKLLASLISRQHDPHLSLQIFRHAQTHH-RASSHHPLPYRAIFLKLSRARCFPE 111
W + P + L+ + D S+ +F A + H + + L+L A F
Sbjct: 10 WSKNITPSQVIKLMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKA 69
Query: 112 MESLLSTLPRHSPQQFLDHC--GEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSV 169
E L+ + +++C ED L++ RGYG +P +LR F +++ PS
Sbjct: 70 AEDLIVRMK-------IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKD-FDCDPSQ 121
Query: 170 RXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVN-EVEVAVRVL 228
+ V+ + LA +KN R G+ P V S N+L+KALC+ + V+ +++
Sbjct: 122 KAYVTVLAILVEENQLNLAFKFYKNMR-EIGLPPTVASLNVLIKALCRNDGTVDAGLKIF 180
Query: 229 DEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQ 288
EM G P+ +Y T++ G G +D A ++ E+++K AP TYT L++G C
Sbjct: 181 LEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGS 240
Query: 289 GRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLC 348
+ A++ +++M+ G++PN TY +++ CK + +A+ L E M+ +G P+
Sbjct: 241 KNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTY 300
Query: 349 CKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FE 406
++ LC+E ++ A E+ R+ + D + +I C K EA N +E
Sbjct: 301 TTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMIL 360
Query: 407 GGSVASLLTYNT-------LIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFC 459
GG + LT+N ++ GLC A L+ M +G + T L+ C
Sbjct: 361 GGITPNRLTWNIHVKTSNEVVRGLCANYP-SRAFTLYLSMRSRGISVEVETLESLVKCLC 419
Query: 460 KVGNAKEGIRILEEMCENGCLPNKSTY 486
K G ++ +++++E+ +GC+P+K T+
Sbjct: 420 KKGEFQKAVQLVDEIVTDGCIPSKGTW 446
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 152/279 (54%), Gaps = 4/279 (1%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
++K +C +++ A ++ EM+ G PNVV YTT++ + AMRVL E+ ++G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
APD Y L+ G + R+ A + +M ENG++PN TYG I Y + + A
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKICGSDNTVASTLIHW 388
+++M G +P+ LC +++ C++G V AC +R V + I G D + L++
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILG-DAKTYTVLMNG 601
Query: 389 LCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
L K KV +A +F E G +A + +Y LI G + G + +A+ ++D+MVE+G PN
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
YN+L+ GFC+ G ++ +L+EM G PN TY
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTY 700
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 113/398 (28%), Positives = 184/398 (46%), Gaps = 16/398 (4%)
Query: 96 YRAIFLKLSRARCFPEMESLLSTLPRH--SPQQFLDHCGEDPLVTAIRGYGLAGKPDSAL 153
Y ++ + LS+A+ E S L + + P F I GY A + SA
Sbjct: 490 YNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAF-------TYGAFISGYIEASEFASAD 542
Query: 154 RTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLK 213
+ +++ G+ P+ + + A S ++ S G+ + + +L+
Sbjct: 543 K-YVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYR-SMVDQGILGDAKTYTVLMN 600
Query: 214 ALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAP 273
L K ++V+ A + EM G G+ P+V SY ++ G++ G+M A + E++++G P
Sbjct: 601 GLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTP 660
Query: 274 DATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLL 333
+ Y +L+ GFCR G + A +++D+M G+ PN VTY +I+ YCK EA L
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLF 720
Query: 334 EDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKG 393
++M KG VP S + +VD C +VERA ++ +K C S + LI+W+ K G
Sbjct: 721 DEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFG 780
Query: 394 KVLEARNVFEEFEGGSVASL-----LTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
K V GS +TYN +I LC+ G L A L+ M P
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
TY L+NG+ K+G E + +E G P+ Y
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G PNVV L+K + + A+RVL EM G+ P++ Y +++ G + MD A
Sbjct: 447 GCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEA 506
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
L E+++ G P+A TY + G+ +A K + +M E GV PN+V +I
Sbjct: 507 RSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINE 566
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICGSD 378
YCK K EA + MV +G + + +++ L + V+ A E++R +R K D
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
LI+ K G + +A ++F+E E G +++ YN L+ G C GE+ +A L D
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M KG PNA TY +I+G+CK G+ E R+ +EM G +P+ Y
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVY 735
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 2/286 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P + ++L+ LCK+ +E A +L EM +G+ + +Y+ ++ G + D A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ E++ G Y + ++G + A + D M +G+ P Y +IE
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSD 378
YC+ K + LL +M ++ V S VV +C G+++ A + + ++ C +
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPN 451
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ +TLI + + +A V +E E G + YN+LI GL + + EA
Sbjct: 452 VVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLV 511
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNK 483
+MVE G PNAFTY I+G+ + + ++EM E G LPNK
Sbjct: 512 EMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 154/366 (42%), Gaps = 53/366 (14%)
Query: 148 KPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVS 207
K D A F + + GI P V + + A S+F + G++PNV+
Sbjct: 607 KVDDAEEIFREMRGK-GIAPDVFSYGVLINGFSKLGNMQKASSIF-DEMVEEGLTPNVII 664
Query: 208 CNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL 267
N+LL C+ E+E A +LDEM GL PN V+Y T++ GY GD+ A R+ E+
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 268 DKGWAPDATTYTVLVDGFCRQGRLVAAI-------------------------------- 295
KG PD+ YT LVDG CR + AI
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTEL 784
Query: 296 ------KVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCC 349
++MD + +PN+VTY +MI+ CK A L M +P+
Sbjct: 785 KTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPT---VI 841
Query: 350 KVVDVLCEEGNVERACEVWRVLRKICGS----DNTVASTLIHWLCKKGKVLEARNVFEEF 405
+L + R E++ V + + D+ + S +I+ K+G +A + ++
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901
Query: 406 ------EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFC 459
+ G S+ T L++G + GE+ A ++ ++MV P++ T LIN C
Sbjct: 902 FAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961
Query: 460 KVGNAK 465
N +
Sbjct: 962 ISSNQR 967
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 145/346 (41%), Gaps = 66/346 (19%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM------ 256
P + C +LL AL + N +++ V M+ +V +V +Y ++ + G++
Sbjct: 184 PRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDV 243
Query: 257 ---------------DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
DGA+++ ++ KG P TY VL+DG C+ RL A ++ +M
Sbjct: 244 LFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEM 303
Query: 302 EENGVQPNEVTYGVMIEAY--------------------------------CKWKKPG-- 327
+ GV + TY ++I+ C K G
Sbjct: 304 DSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVM 363
Query: 328 -EAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAS--- 383
+A L + M+ G +P + +++ C E NV + E+ ++K N V S
Sbjct: 364 EKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK----RNIVISPYT 419
Query: 384 --TLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMV 440
T++ +C G + A N+ +E G +++ Y TLI + +A R+ +M
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
E+G AP+ F YN LI G K E L EM ENG PN TY
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 111/269 (41%), Gaps = 23/269 (8%)
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD 300
V + + GY +G ++ A+ V + P + VL+D R RL V
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKG 211
Query: 301 MEENGVQPNEVTYGVMIEAYCK-----------WKKPGE----------AVNLLEDMVRK 339
M E V + TY ++I A+C+ +K E A+ L E M+ K
Sbjct: 212 MVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICK 271
Query: 340 GHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-DNTVASTLIHWLCKKGKVLEA 398
G VP ++D LC+ +E A + + + S DN S LI L K A
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAA 331
Query: 399 RNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
+ + E G Y+ I + + G + +A L+D M+ G P A Y LI G
Sbjct: 332 KGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEG 391
Query: 458 FCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+C+ N ++G +L EM + + + TY
Sbjct: 392 YCREKNVRQGYELLVEMKKRNIVISPYTY 420
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 7/209 (3%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I GY +G A R F ++ + G+ P + A ++F ++
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLK-GLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK 760
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGL----VPNVVSYTTVMGGYAWR 253
G + + N L+ + K + E+ VL+ ++ PN V+Y ++
Sbjct: 761 --GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKE 818
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
G+++ A + ++ + P TYT L++G+ + GR V D+ G++P+ + Y
Sbjct: 819 GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMY 878
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHV 342
V+I A+ K +A+ L++ M K V
Sbjct: 879 SVIINAFLKEGMTTKALVLVDQMFAKNAV 907
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/288 (33%), Positives = 163/288 (56%), Gaps = 5/288 (1%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEML-GMGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
P +V N L+ ++ A VL +M+ G+VP+V +Y +++ GY G + A+
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
VL ++ +KG P+ +YT+LVDGFC+ G++ A V+++M +G++PN V + +I A+C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTV 381
K + EAV + +M RKG P ++ LCE ++ A + R + NTV
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 382 A-STLIHWLCKKGKVLEARNVFEE--FEGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+TLI+ ++G++ EAR + E F+G + +TYN+LI GLC GE+ +A L++
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDE-ITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M+ G AP+ + N+LING C+ G +E + +EM G P+ T+
Sbjct: 590 MLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 172/342 (50%), Gaps = 7/342 (2%)
Query: 147 GKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVV 206
G+ D+A F RI +P + V + R A +V + T +G+ P+V
Sbjct: 336 GRVDAAKDLFYRIP-----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+ N L+ K V +A+ VL +M G PNV SYT ++ G+ G +D A VL E+
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
G P+ + L+ FC++ R+ A+++ +M G +P+ T+ +I C+ +
Sbjct: 451 SADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTL 385
A+ LL DM+ +G V ++ +++ G ++ A + V ++ + D ++L
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 386 IHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
I LC+ G+V +AR++FE+ G S ++ N LI GLC G + EA +MV +G
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 445 APNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P+ T+N LING C+ G ++G+ + ++ G P+ T+
Sbjct: 631 TPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 206/466 (44%), Gaps = 41/466 (8%)
Query: 55 HRLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMES 114
H++ P L L+ + S+++F + + H Y+ + KL F ++
Sbjct: 74 HKITPFQLYKLLELPLNVSTSMELFSWTGSQN-GYRHSFDVYQVLIGKLGANGEFKTIDR 132
Query: 115 LLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXX 174
LL + E ++ +R Y AG P R L + + P+ +
Sbjct: 133 LLIQMKDEGIV-----FKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNV 187
Query: 175 XXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGM 234
V H++A +VF + +R + P + + +++KA C VNE++ A+ +L +M
Sbjct: 188 VLEILVSGNCHKVAANVFYDMLSR-KIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH 246
Query: 235 GLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAA 294
G VPN V Y T++ + ++ A+++L E+ G PDA T+ ++ G C+ R+ A
Sbjct: 247 GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEA 306
Query: 295 IKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNL---------------------- 332
K+++ M G P+++TYG ++ CK + A +L
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTH 366
Query: 333 ---------LEDMVRK-GHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICGSDNTV 381
L DMV G VP ++ +EG V A EV +R K C +
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMV 440
+ L+ CK GK+ EA NV E G + + +N LI+ C+ + EA ++ +M
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
KG P+ +T+N LI+G C+V K + +L +M G + N TY
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 168/351 (47%), Gaps = 3/351 (0%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I G+ G+ D A + + GI P V + LA V + R
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G PNV S IL+ CK+ +++ A VL+EM GL PN V + ++ + +
Sbjct: 418 K-GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ + E+ KG PD T+ L+ G C + A+ ++ DM GV N VTY +I
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICG 376
A+ + + EA L+ +MV +G ++ LC G V++A ++ ++LR
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARL 435
N + LI+ LC+ G V EA +E GS ++T+N+LI GLC G + + +
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ + +G P+ T+N L++ CK G + +L+E E+G +PN T+
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTW 707
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 169/323 (52%), Gaps = 10/323 (3%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
+ I GY G AL + ++ G +P+V + + A++V N +
Sbjct: 394 SLIYGYWKEGLVGLALEVLHDMRNK-GCKPNVYSYTILVDGFCKLGKIDEAYNVL-NEMS 451
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
G+ PN V N L+ A CK + + AV + EM G P+V ++ +++ G ++
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ +L +++ +G + TY L++ F R+G + A K++++M G +E+TY +I
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKIC 375
+ C+ + +A +L E M+R GH PS+ C +++ LC G VE A E + VLR
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLR--- 628
Query: 376 GS--DNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEA 432
GS D ++LI+ LC+ G++ + +F + + G +T+NTL++ LC+ G + +A
Sbjct: 629 GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Query: 433 ARLWDDMVEKGRAPNAFTYNLLI 455
L D+ +E G PN T+++L+
Sbjct: 689 CLLLDEGIEDGFVPNHRTWSILL 711
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A S+F+ R G +P+ +SCNIL+ LC+ VE AV EM+ G P++V++ +++
Sbjct: 583 ARSLFE-KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLI 641
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G G ++ + + ++ +G PD T+ L+ C+ G + A ++D+ E+G
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 308 PNEVTYGVMIEA 319
PN T+ +++++
Sbjct: 702 PNHRTWSILLQS 713
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 214/446 (47%), Gaps = 17/446 (3%)
Query: 56 RLHPKLLASLISR-QHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMES 114
RL+P + ++ R ++D L + H H L A+ L R+ + +S
Sbjct: 75 RLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQS 134
Query: 115 LLSTLPRHSPQQFLD----------HCGEDPLV--TAIRGYGLAGKPDSALRTFLRIESR 162
L + R S L+ +CG + V IR Y A K A F + S+
Sbjct: 135 CLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSK 194
Query: 163 LGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVE 222
G S+ V+ LA V++ +R GV NV + NI++ ALCK ++E
Sbjct: 195 -GFTVSIDACNALIGSLVRIGWVELAWGVYQEI-SRSGVGINVYTLNIMVNALCKDGKME 252
Query: 223 VAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLV 282
L ++ G+ P++V+Y T++ Y+ +G M+ A ++ + KG++P TY ++
Sbjct: 253 KVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVI 312
Query: 283 DGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHV 342
+G C+ G+ A +V +M +G+ P+ TY ++ CK E + DM + V
Sbjct: 313 NGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVV 372
Query: 343 PSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNV 401
P ++ + GN+++A + +++ DN + + LI C+KG + A N+
Sbjct: 373 PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNL 432
Query: 402 FEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCK 460
E + G ++TYNT++ GLC+R L EA +L+++M E+ P+++T +LI+G CK
Sbjct: 433 RNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCK 492
Query: 461 VGNAKEGIRILEEMCENGCLPNKSTY 486
+GN + + + ++M E + TY
Sbjct: 493 LGNLQNAMELFQKMKEKRIRLDVVTY 518
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 172/351 (49%), Gaps = 4/351 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I Y G + A + + G P V ++ ++ A VF
Sbjct: 275 TLISAYSSKGLMEEAFELMNAMPGK-GFSPGVYTYNTVINGLCKHGKYERAKEVFA-EML 332
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G+SP+ + LL CK +V +V +M +VP++V ++++M + G++D
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ V + G PD YT+L+ G+CR+G + A+ + ++M + G + VTY ++
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICG 376
CK K GEA L +M + P S ++D C+ GN++ A E+++ ++ K
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARL 435
D +TL+ K G + A+ ++ + + + ++Y+ L+ LC +G L EA R+
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRV 572
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
WD+M+ K P N +I G+C+ GNA +G LE+M G +P+ +Y
Sbjct: 573 WDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISY 623
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 156/300 (52%), Gaps = 4/300 (1%)
Query: 191 VFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY 250
++ NS G+ P+ V IL++ C+ + VA+ + +EML G +VV+Y T++ G
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 251 AWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
R + A ++ E+ ++ PD+ T T+L+DG C+ G L A+++ M+E ++ +
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-R 369
VTY +++ + K A + DMV K +P+ +V+ LC +G++ A VW
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 370 VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGE 428
++ K + +++I C+ G + + E+ G V ++YNTLI G
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 429 LCEAARLWDDMVEK--GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ +A L M E+ G P+ FTYN +++GFC+ KE +L +M E G P++STY
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTY 695
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVA---VRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
G P+ +S N L+ + + A V+ ++E G GLVP+V +Y +++ G+ + M
Sbjct: 615 GFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG-GLVPDVFTYNSILHGFCRQNQM 673
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
A VL +++++G PD +TYT +++GF Q L A ++ D+M + G P++
Sbjct: 674 KEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 156/291 (53%), Gaps = 2/291 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P++V+ N LL C N + AV ++D+M+ MG P+ V++TT++ G
Sbjct: 128 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 187
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ ++ KG PD TY +++G C++G A+ +++ ME+ ++ + V Y +I
Sbjct: 188 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVI 247
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICG 376
++ CK++ +A+NL +M KG P ++ LC G A + +L +
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARL 435
+ ++LI K+GK++EA +F+E S+ +++TYN+LI G C L EA ++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ MV K P+ TYN LINGFCK +G+ + +M G + N TY
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTY 418
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/323 (29%), Positives = 169/323 (52%), Gaps = 5/323 (1%)
Query: 167 PSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVR 226
PS+ + K+ L S F GVS N+ + NI++ LC+ +++ A+
Sbjct: 63 PSIVEFSKLLSAIAKMKKFDLVIS-FGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121
Query: 227 VLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFC 286
+L +M+ +G P++V+ +++ G+ + A+ ++ ++++ G+ PD T+T LV G
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 287 RQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSS- 345
+ + A+ +++ M G QP+ VTYG +I CK +P A+NLL M KG + +
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADV 240
Query: 346 GLCCKVVDVLCEEGNVERACEVWRVL-RKICGSDNTVASTLIHWLCKKGKVLEARNVFEE 404
+ V+D LC+ +V+ A ++ + K D S+LI LC G+ +A + +
Sbjct: 241 VIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSD 300
Query: 405 -FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGN 463
E +++T+N+LI + G+L EA +L+D+M+++ PN TYN LINGFC
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 360
Query: 464 AKEGIRILEEMCENGCLPNKSTY 486
E +I M CLP+ TY
Sbjct: 361 LDEAQQIFTLMVSKDCLPDVVTY 383
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 166/339 (48%), Gaps = 4/339 (1%)
Query: 150 DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCN 209
D AL F ++++ GIRP V R A + + R ++PNVV+ N
Sbjct: 257 DDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-KINPNVVTFN 314
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
L+ A K ++ A ++ DEM+ + PN+V+Y +++ G+ +D A ++ ++ K
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
PD TY L++GFC+ ++V +++ DM G+ N VTY +I + + A
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHW 388
+ + MV G P+ ++D LC+ G +E+A V+ L+K D + +
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 389 LCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
+CK GKV + ++F G ++ YNT+I+G C++G EA L+ M E G P+
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ TYN LI + G+ +++EM + STY
Sbjct: 555 SGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 160/330 (48%), Gaps = 37/330 (11%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
N + + +VV + ++ +LCK V+ A+ + EM G+ P+V +Y++++
Sbjct: 229 NKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 288
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
G A R+L ++L++ P+ T+ L+D F ++G+L+ A K+ D+M + + PN VTY
Sbjct: 289 GRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTY 348
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
+I +C + EA + MV K +P +++ C+ V E++R + +
Sbjct: 349 NSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSR 408
Query: 374 ICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGEL-- 429
NTV +TLIH + A+ VF++ V +++TYNTL+ GLC+ G+L
Sbjct: 409 RGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 468
Query: 430 ---------------------------CEAARL---WD---DMVEKGRAPNAFTYNLLIN 456
C+A ++ WD + KG P+ YN +I+
Sbjct: 469 AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMIS 528
Query: 457 GFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
GFCK G +E + +M E+G LP+ TY
Sbjct: 529 GFCKKGLKEEAYTLFIKMKEDGPLPDSGTY 558
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 37/268 (13%)
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
+D A+ + GE++ P ++ L+ + + I + ME GV N TY +
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPS--------SGLC--------CKVVDVLCEEG 359
MI C+ + A+ +L M++ G+ PS +G C +VD + E G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 360 --------------------NVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEAR 399
E V R++ K C D +I+ LCK+G+ A
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 400 NVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
N+ + E G + A ++ Y+T+I LC+ + +A L+ +M KG P+ FTY+ LI+
Sbjct: 226 NLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCL 285
Query: 459 CKVGNAKEGIRILEEMCENGCLPNKSTY 486
C G + R+L +M E PN T+
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTF 313
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 88/182 (48%), Gaps = 2/182 (1%)
Query: 137 VTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSR 196
T I G+ A D+A F ++ S G+ P++ +N + A VF+ +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQ 477
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
+ + P++ + NI+ + +CK +VE + + G+ P+V++Y T++ G+ +G
Sbjct: 478 -KSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
+ A + ++ + G PD+ TY L+ R G A+ +++ +M + TYG++
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLV 596
Query: 317 IE 318
+
Sbjct: 597 TD 598
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 120/469 (25%), Positives = 206/469 (43%), Gaps = 60/469 (12%)
Query: 60 KLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTL 119
+L LIS + DP L L+ + + S L ++ + L+ A+ + ++ S L
Sbjct: 69 ELFRQLISSELDPDLCLRYYSWLVKNSDISVSLELTFK-LLHSLANAKRYSKIRSFLDGF 127
Query: 120 PR-------HSPQQFLDHCGE--------DPLVTAIRGYGLAGKPDSALRTFLRIESRLG 164
R HS + C D LV A Y + + F R G
Sbjct: 128 VRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLA---YANNSRFELGFEAFKR-SGYYG 183
Query: 165 IRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVA 224
+ S ++ R V+K R + PNV + N+++ ALCK ++ A
Sbjct: 184 YKLSALSCKPLMIALLKENRSADVEYVYK-EMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 225 VRVLDEMLGMGLVPNVVSYTTVMGGYA--------------------------------- 251
V+++M G PNVVSY T++ GY
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNIL 302
Query: 252 ----WRGD-MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
W+ D + G+M+V E+LD+ P+ +Y L++G C G++ AI + D M GV
Sbjct: 303 IDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGV 362
Query: 307 QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE 366
QPN +TY +I +CK EA+++ + +G VP++ + ++D C+ G ++
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 367 VWRVL-RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCE 425
+ + R+ D + LI LC+ G + A+ +F++ + L+T++ L+ G C
Sbjct: 423 LKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCR 482
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+GE +AA L +M + G P TYN+++ G+CK GN K + +M
Sbjct: 483 KGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/288 (30%), Positives = 149/288 (51%), Gaps = 2/288 (0%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
VSPN+ + NIL+ K + + +++V EML + PNV+SY +++ G G + A+
Sbjct: 292 VSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAI 351
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+ +++ G P+ TY L++GFC+ L A+ + ++ G P Y ++I+AY
Sbjct: 352 SMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAY 411
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
CK K + L E+M R+G VP G ++ LC GN+E A +++ L D
Sbjct: 412 CKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLV 471
Query: 381 VASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDM 439
L+ C+KG+ +A + +E G LTYN ++ G C+ G L A + M
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Query: 440 VEKGRAP-NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ R N +YN+L+ G+ + G ++ +L EM E G +PN+ TY
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/346 (26%), Positives = 160/346 (46%), Gaps = 42/346 (12%)
Query: 181 QNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNV 240
N R L FK S +G + +SC L+ AL K N V EM+ + PNV
Sbjct: 165 NNSRFELGFEAFKRS-GYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNV 223
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCR---QGRLVAAIKV 297
++ V+ G M+ A V+ ++ G +P+ +Y L+DG+C+ G++ A V
Sbjct: 224 FTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 298 MDDMEENGVQPNEVTYGVMIEAY-----------------------------------CK 322
+ +M EN V PN T+ ++I+ + C
Sbjct: 284 LKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCN 343
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT-V 381
K EA+++ + MV G P+ +++ C+ ++ A +++ ++ T +
Sbjct: 344 GGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRM 403
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMV 440
+ LI CK GK+ + + EE E G V + TYN LIAGLC G + A +L+D +
Sbjct: 404 YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT 463
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
KG P+ T+++L+ G+C+ G +++ +L+EM + G P TY
Sbjct: 464 SKG-LPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTY 508
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLG-MGLVPNVVSYTTVMGGYAWRGD 255
++ G+ P ++ NI++K CK ++ A + +M L NV SY ++ GY+ +G
Sbjct: 497 SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGK 556
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQG 289
++ A +L E+L+KG P+ TY ++ + QG
Sbjct: 557 LEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 94/296 (31%), Positives = 160/296 (54%), Gaps = 12/296 (4%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P++V+ + LL C + AV ++D+M+ MG P+ +++TT++ G
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ ++ +G P+ TY V+V+G C++G + A +++ ME ++ N V Y +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-----R 372
++ CK++ +A+NL +M KG P+ ++ LC N ER + R+L R
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC---NYERWSDASRLLSDMIER 324
Query: 373 KICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELC 430
KI + N V + LI K+GK++EA +++E S+ + TY++LI G C L
Sbjct: 325 KI--NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
EA +++ M+ K PN TYN LINGFCK EG+ + EM + G + N TY
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTY 438
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 151/288 (52%), Gaps = 2/288 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV PNV++ + L+ LC A R+L +M+ + PNVV++ ++ + G + A
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ E++ + PD TY+ L++GFC RL A + + M PN VTY +I
Sbjct: 350 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLING 409
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+CK K+ E V L +M ++G V ++ ++ + + + A V++ + N
Sbjct: 410 FCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 380 TVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWD 437
+ +TL+ LCK GK+ +A VFE + + ++ TYN +I G+C+ G++ + L+
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+ KG P+ YN +I+GFC+ G +E + +M E+G LP+ T
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 155/286 (54%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++ N LL A+ K+ + ++ + + ++M +G+ N+ +Y ++ + R + A+ +
Sbjct: 83 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 142
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG+++ G+ P T + L++G+C R+ A+ ++D M E G +P+ +T+ +I
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K EAV L++ MV++G P+ VV+ LC+ G+++ A + + N V
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 383 -STLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMV 440
ST+I LCK +A N+F E E V +++TY++LI+ LC +A+RL DM+
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
E+ PN T+N LI+ F K G E ++ +EM + P+ TY
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 368
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 172/353 (48%), Gaps = 4/353 (1%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNS 195
T I G L K A+ R+ R G +P++ + LA ++ N
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLL-NK 250
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
+ NVV + ++ +LCK + A+ + EM G+ PNV++Y++++
Sbjct: 251 MEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
A R+L +++++ P+ T+ L+D F ++G+LV A K+ D+M + + P+ TY
Sbjct: 311 WSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 370
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKIC 375
+I +C + EA ++ E M+ K P+ +++ C+ ++ E++R + +
Sbjct: 371 LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG 430
Query: 376 GSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAA 433
NTV +TLIH + A+ VF++ V +++TYNTL+ GLC+ G+L +A
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+++ + P +TYN++I G CK G ++G + + G P+ Y
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIY 543
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 154/304 (50%), Gaps = 6/304 (1%)
Query: 150 DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCN 209
D AL F +E++ G+RP+V +R A + + R ++PNVV+ N
Sbjct: 277 DDALNLFTEMENK-GVRPNVITYSSLISCLCNYERWSDASRLLSDMIER-KINPNVVTFN 334
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
L+ A K ++ A ++ DEM+ + P++ +Y++++ G+ +D A + ++ K
Sbjct: 335 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 394
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
P+ TY L++GFC+ R+ +++ +M + G+ N VTY +I + + + A
Sbjct: 395 DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 454
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAS--TLIH 387
+ + MV G P+ ++D LC+ G +E+A V+ L++ + T+ + +I
Sbjct: 455 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR-SKMEPTIYTYNIMIE 513
Query: 388 WLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
+CK GKV + ++F G ++ YNT+I+G C +G EA L+ M E G P
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 447 NAFT 450
++ T
Sbjct: 574 DSGT 577
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 180/353 (50%), Gaps = 4/353 (1%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNS 195
TAI + GK + A++ F ++E G+ P+V R+ A +FK
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEAF-MFKEK 320
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
G+ P +++ +IL+K L + + A VL EM G PNV+ Y ++ + G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
++ A+ + ++ KG + ++TY L+ G+C+ G+ A +++ +M G N+ ++
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKI 374
+I C A+ + +M+ + P GL ++ LC+ G +A E+W + L K
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAA 433
D ++ L+H LC+ GK+ EA + +E G G V ++YNTLI+G C + +L EA
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
D+MV++G P+ +TY++LI G + +E I+ ++ NG LP+ TY
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G + + N LL LC+ +++ A R+ E+LG G V + VSY T++ G + +D A
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
L E++ +G PD TY++L+ G ++ AI+ DD + NG+ P+ TY VMI+
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
CK ++ E ++M+ K P++ + ++ C G + A E+ ++ S N
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Query: 380 TVAST-LIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ T LI + +V EA+ +FEE G ++ Y LI G + G++ + L
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M K PN TY ++I G+ + GN E R+L EM E G +P+ TY
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 156/324 (48%), Gaps = 38/324 (11%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+ +CNILL +L + NE + D ++ G+ P+V +TT + + G ++ A
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+++ ++ + G AP+ T+ ++DG GR A + M E G++P +TY ++++
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSD 378
+ K+ G+A +L++M +KG P+ + ++D E G++ +A E+ ++ K
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-------EGGSVASLLT---------------- 415
++ +TLI CK G+ A + +E GS S++
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 416 -------------YNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
TLI+GLC+ G+ +A LW + KG + T N L++G C+ G
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 463 NAKEGIRILEEMCENGCLPNKSTY 486
E RI +E+ GC+ ++ +Y
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSY 543
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 133/276 (48%), Gaps = 2/276 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G + VS N L+ C +++ A LDEM+ GL P+ +Y+ ++ G ++ A
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ + G PD TY+V++DG C+ R + D+M VQPN V Y +I A
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
YC+ + A+ L EDM KG P+S ++ + VE A ++ +R N
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 380 TVAST-LIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWD 437
T LI K G++++ + E +V + +TY +I G G + EA+RL +
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEE 473
+M EKG P++ TY I G+ K G E + +E
Sbjct: 775 EMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 162/358 (45%), Gaps = 18/358 (5%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I+GY G+ D+A R ++ L I +V + +H +F +S
Sbjct: 405 TLIKGYCKNGQADNAERL---LKEMLSIGFNVNQGSFTSVICLL-----CSHLMF-DSAL 455
Query: 198 RF-------GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY 250
RF +SP L+ LCK + A+ + + L G V + + ++ G
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 251 AWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
G +D A R+ E+L +G D +Y L+ G C + +L A +D+M + G++P+
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-R 369
TY ++I K EA+ +D R G +P ++D C+ E E +
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 370 VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGE 428
++ K + V + LI C+ G++ A + E+ + ++ + TY +LI G+
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ EA L+++M +G PN F Y LI+G+ K+G + +L EM PNK TY
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 180/353 (50%), Gaps = 4/353 (1%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNS 195
TAI + GK + A++ F ++E G+ P+V R+ A +FK
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEA-GVAPNVVTFNTVIDGLGMCGRYDEAF-MFKEK 320
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
G+ P +++ +IL+K L + + A VL EM G PNV+ Y ++ + G
Sbjct: 321 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
++ A+ + ++ KG + ++TY L+ G+C+ G+ A +++ +M G N+ ++
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKI 374
+I C A+ + +M+ + P GL ++ LC+ G +A E+W + L K
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAA 433
D ++ L+H LC+ GK+ EA + +E G G V ++YNTLI+G C + +L EA
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAF 560
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
D+MV++G P+ +TY++LI G + +E I+ ++ NG LP+ TY
Sbjct: 561 MFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 148/289 (51%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G + + N LL LC+ +++ A R+ E+LG G V + VSY T++ G + +D A
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEA 559
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
L E++ +G PD TY++L+ G ++ AI+ DD + NG+ P+ TY VMI+
Sbjct: 560 FMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDG 619
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
CK ++ E ++M+ K P++ + ++ C G + A E+ ++ S N
Sbjct: 620 CCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPN 679
Query: 380 TVAST-LIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ T LI + +V EA+ +FEE G ++ Y LI G + G++ + L
Sbjct: 680 SATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLR 739
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M K PN TY ++I G+ + GN E R+L EM E G +P+ TY
Sbjct: 740 EMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 156/324 (48%), Gaps = 38/324 (11%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+ +CNILL +L + NE + D ++ G+ P+V +TT + + G ++ A
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+++ ++ + G AP+ T+ ++DG GR A + M E G++P +TY ++++
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSD 378
+ K+ G+A +L++M +KG P+ + ++D E G++ +A E+ ++ K
Sbjct: 340 LTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLT 399
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-------EGGSVASLLT---------------- 415
++ +TLI CK G+ A + +E GS S++
Sbjct: 400 SSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVG 459
Query: 416 -------------YNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
TLI+GLC+ G+ +A LW + KG + T N L++G C+ G
Sbjct: 460 EMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAG 519
Query: 463 NAKEGIRILEEMCENGCLPNKSTY 486
E RI +E+ GC+ ++ +Y
Sbjct: 520 KLDEAFRIQKEILGRGCVMDRVSY 543
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 133/276 (48%), Gaps = 2/276 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G + VS N L+ C +++ A LDEM+ GL P+ +Y+ ++ G ++ A
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEA 594
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ + G PD TY+V++DG C+ R + D+M VQPN V Y +I A
Sbjct: 595 IQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRA 654
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
YC+ + A+ L EDM KG P+S ++ + VE A ++ +R N
Sbjct: 655 YCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 380 TVAST-LIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWD 437
T LI K G++++ + E +V + +TY +I G G + EA+RL +
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEE 473
+M EKG P++ TY I G+ K G E + +E
Sbjct: 775 EMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 162/358 (45%), Gaps = 18/358 (5%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I+GY G+ D+A R ++ L I +V + +H +F +S
Sbjct: 405 TLIKGYCKNGQADNAERL---LKEMLSIGFNVNQGSFTSVICLL-----CSHLMF-DSAL 455
Query: 198 RF-------GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY 250
RF +SP L+ LCK + A+ + + L G V + + ++ G
Sbjct: 456 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 515
Query: 251 AWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
G +D A R+ E+L +G D +Y L+ G C + +L A +D+M + G++P+
Sbjct: 516 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 575
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-R 369
TY ++I K EA+ +D R G +P ++D C+ E E +
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 370 VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGE 428
++ K + V + LI C+ G++ A + E+ + ++ + TY +LI G+
Sbjct: 636 MMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISR 695
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ EA L+++M +G PN F Y LI+G+ K+G + +L EM PNK TY
Sbjct: 696 VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITY 753
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 181/344 (52%), Gaps = 6/344 (1%)
Query: 146 AGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNV 205
+G AL F ++E R I+ SV ++ A S+F + G+ +V
Sbjct: 223 SGNSALALDLFRKMEER-NIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK-GIKADV 280
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGE 265
V+ + L+ LC + + ++L EM+G ++P+VV+++ ++ + G + A + E
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK 325
++ +G APD TY L+DGFC++ L A ++ D M G +P+ VTY ++I +YCK K+
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400
Query: 326 PGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKICGSDNTVAS 383
+ + L ++ KG +P++ +V C+ G + A E+++ V R + S T
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG- 459
Query: 384 TLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEK 442
L+ LC G++ +A +FE+ + + + YN +I G+C ++ +A L+ + +K
Sbjct: 460 ILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDK 519
Query: 443 GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G P+ TYN++I G CK G+ E + +M E+GC P+ TY
Sbjct: 520 GVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTY 563
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 163/311 (52%), Gaps = 9/311 (2%)
Query: 181 QNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNV 240
+ K+ A SV + + G P+ ++ + L+ C V AV ++D M+ M P++
Sbjct: 117 RKKKLLFAFSVLGRA-WKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDL 175
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD 300
V+ +T++ G +G + A+ ++ +++ G+ PD TY +++ C+ G A+ +
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
MEE ++ + V Y ++I++ CK +A++L +M KG ++ LC +G
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGK 295
Query: 361 VERACEVWRVLRKICGS----DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLT 415
+ ++LR++ G D S LI K+GK+LEA+ ++ E +A +T
Sbjct: 296 WDDGA---KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 416 YNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMC 475
YN+LI G C+ L EA +++D MV KG P+ TY++LIN +CK +G+R+ E+
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREIS 412
Query: 476 ENGCLPNKSTY 486
G +PN TY
Sbjct: 413 SKGLIPNTITY 423
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 152/321 (47%), Gaps = 37/321 (11%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P + N L A+ + + ++ + M G+ ++ + T ++ Y + + A V
Sbjct: 68 PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSV 127
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG G+ PD T++ LV+GFC +GR+ A+ ++D M E +P+ VT +I C
Sbjct: 128 LGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCL 187
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
+ EA+ L++ MV G P V++ LC+ GN A +++R + + + V
Sbjct: 188 KGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 383 -STLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLC---------------- 424
S +I LCK G +A ++F E E G A ++TY++LI GLC
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 425 -------------------ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
+ G+L EA L+++M+ +G AP+ TYN LI+GFCK
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 466 EGIRILEEMCENGCLPNKSTY 486
E ++ + M GC P+ TY
Sbjct: 368 EANQMFDLMVSKGCEPDIVTY 388
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 103/218 (47%), Gaps = 2/218 (0%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I Y A + D +R F I S+ G+ P+ Q+ + A +F+ +R
Sbjct: 392 INSYCKAKRVDDGMRLFREISSK-GLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR- 449
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV P+VV+ ILL LC E+ A+ + ++M + + Y ++ G +D A
Sbjct: 450 GVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA 509
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + DKG PD TY V++ G C++G L A + M+E+G P++ TY ++I A
Sbjct: 510 WSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCE 357
+ +V L+E+M G S V+D+L +
Sbjct: 570 HLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSD 607
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/351 (28%), Positives = 176/351 (50%), Gaps = 7/351 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T ++G+ L G+ + A ++S+ G +P ++ R A V + +
Sbjct: 265 TLVQGFSLRGRIEGARLIISEMKSK-GFQPDMQTYNPILSWMCNEGR---ASEVLREMK- 319
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
G+ P+ VS NIL++ ++E+A DEM+ G+VP +Y T++ G ++
Sbjct: 320 EIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIE 379
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ E+ +KG D+ TY +L++G+C+ G A + D+M +G+QP + TY +I
Sbjct: 380 AAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLI 439
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKIC-G 376
C+ K EA L E +V KG P + ++D C GN++RA + + + +
Sbjct: 440 YVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSIN 499
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARL 435
D+ + L+ LC +GK EAR + E + G ++YNTLI+G ++G+ A +
Sbjct: 500 PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMV 559
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
D+M+ G P TYN L+ G K + +L EM G +PN S++
Sbjct: 560 RDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSF 610
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 151/298 (50%), Gaps = 5/298 (1%)
Query: 191 VFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY 250
VF R + NV + NI++ LCK +++ A L M G+ P +V+Y T++ G+
Sbjct: 211 VFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGF 270
Query: 251 AWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
+ RG ++GA ++ E+ KG+ PD TY ++ C +GR A +V+ +M+E G+ P+
Sbjct: 271 SLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDS 327
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV 370
V+Y ++I A ++MV++G VP+ ++ L E +E A + R
Sbjct: 328 VSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIRE 387
Query: 371 LR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGE 428
+R K D+ + LI+ C+ G +A + +E G + TY +LI LC + +
Sbjct: 388 IREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNK 447
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
EA L++ +V KG P+ N L++G C +GN +L+EM P+ TY
Sbjct: 448 TREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTY 505
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 131/286 (45%), Gaps = 7/286 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P +CN +L L ++N +E A +M M + NV ++ ++ G + A
Sbjct: 185 GFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
LG + G P TY LV GF +GR+ A ++ +M+ G QP+ TY ++
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKICGS 377
C G A +L +M G VP S ++ G++E A +R ++++
Sbjct: 305 MC---NEGRASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF-AYRDEMVKQGMVP 360
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLW 436
+TLIH L + K+ A + E E G V +TYN LI G C+ G+ +A L
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
D+M+ G P FTY LI C+ +E + E++ G P+
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPD 466
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 93/192 (48%), Gaps = 1/192 (0%)
Query: 164 GIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEV 223
GI+P+ + + R A +F+ + G+ P++V N L+ C + ++
Sbjct: 427 GIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK-GMKPDLVMMNTLMDGHCAIGNMDR 485
Query: 224 AVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVD 283
A +L EM M + P+ V+Y +M G G + A ++GE+ +G PD +Y L+
Sbjct: 486 AFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLIS 545
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVP 343
G+ ++G A V D+M G P +TY +++ K ++ A LL +M +G VP
Sbjct: 546 GYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVP 605
Query: 344 SSGLCCKVVDVL 355
+ C V++ +
Sbjct: 606 NDSSFCSVIEAM 617
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 113/268 (42%), Gaps = 40/268 (14%)
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
+D A+ + +KG+ P T ++ R R+ A DM ++ N T+ +
Sbjct: 171 VDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNI 230
Query: 316 MIEAYCKWKKPGEAVNLL-----------------------------------EDMVRKG 340
MI CK K +A L +M KG
Sbjct: 231 MINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG 290
Query: 341 HVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARN 400
P ++ +C EG RA EV R +++I ++V+ ++ C LE
Sbjct: 291 FQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 401 VF--EEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
+ E + G V + TYNTLI GL ++ A L ++ EKG ++ TYN+LING+
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGY 407
Query: 459 CKVGNAKEGIRILEEMCENGCLPNKSTY 486
C+ G+AK+ + +EM +G P + TY
Sbjct: 408 CQHGDAKKAFALHDEMMTDGIQPTQFTY 435
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 89/180 (49%), Gaps = 9/180 (5%)
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV 370
+ + +++ C+ + EA+ M KG P + C ++ +L +E A +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 371 LRKICGSDNTVA-STLIHWLCKKGKVLEAR---NVFEEFEGGSVASLLTYNTLIAGLCER 426
+ ++ N + +I+ LCK+GK+ +A+ + E F G +++TYNTL+ G R
Sbjct: 216 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVF--GIKPTIVTYNTLVQGFSLR 273
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G + A + +M KG P+ TYN +++ C G A E +L EM E G +P+ +Y
Sbjct: 274 GRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSY 330
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/293 (31%), Positives = 154/293 (52%), Gaps = 6/293 (2%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P++V+ N LL C N + AV ++ +M+ MG P+ ++ T++ G
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ ++ KG PD TY ++V+G C++G + A+ ++ ME+ ++P V Y +I
Sbjct: 204 EAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTII 263
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKIC 375
+A C +K +A+NL +M KG P+ ++ LC G A + + RKI
Sbjct: 264 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI- 322
Query: 376 GSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAA 433
+ N V S LI K+GK++EA +++E S+ + TY++LI G C L EA
Sbjct: 323 -NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+++ M+ K PN TYN LI GFCK EG+ + EM + G + N TY
Sbjct: 382 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 151/293 (51%), Gaps = 10/293 (3%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ PNVV+ N L++ LC A R+L +M+ + PNVV+++ ++ + G + A
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ E++ + PD TY+ L++GFC RL A + + M PN VTY +I+
Sbjct: 346 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 405
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+CK K+ E + L +M ++G V ++ ++ + R C+ +++ K SD
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQA----RECDNAQIVFKQMVSDG 461
Query: 380 TV-----ASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAA 433
+ S L+ LC GKV A VFE + + + TYN +I G+C+ G++ +
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGW 521
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L+ + KG PN TY +++GFC+ G +E + EM E G LP+ TY
Sbjct: 522 DLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 155/286 (54%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++V + LL A+ K+N+ ++ + + ++M +G+ N+ +Y+ ++ + R + A+ V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
L +++ G+ PD T L++GFC R+ A+ ++ M E G QP+ T+ +I +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-ICGSDNTV 381
+ EAV L++ MV KG P VV+ LC+ G+++ A + + + + +
Sbjct: 199 HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVI 258
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMV 440
+T+I LC V +A N+F E + + +++TYN+LI LC G +A+RL DM+
Sbjct: 259 YNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 318
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
E+ PN T++ LI+ F K G E ++ +EM + P+ TY
Sbjct: 319 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 150/288 (52%), Gaps = 2/288 (0%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ P VV N ++ ALC V A+ + EM G+ PNVV+Y +++ G A
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
R+L +++++ P+ T++ L+D F ++G+LV A K+ D+M + + P+ TY +I +
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
C + EA ++ E M+ K P+ ++ C+ V+ E++R + + NT
Sbjct: 372 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNT 431
Query: 381 VA-STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
V +TLIH + + A+ VF++ G + ++TY+ L+ GLC G++ A +++
Sbjct: 432 VTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEY 491
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ P+ +TYN++I G CK G ++G + + G PN TY
Sbjct: 492 LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 162/327 (49%), Gaps = 4/327 (1%)
Query: 150 DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCN 209
+ AL F ++++ GIRP+V R A + + R ++PNVV+ +
Sbjct: 273 NDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFS 330
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
L+ A K ++ A ++ DEM+ + P++ +Y++++ G+ +D A + ++ K
Sbjct: 331 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 390
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
P+ TY L+ GFC+ R+ +++ +M + G+ N VTY +I + + ++ A
Sbjct: 391 DCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNA 450
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSDNTVASTLIHW 388
+ + MV G +P ++D LC G VE A V+ L R D + +I
Sbjct: 451 QIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEG 510
Query: 389 LCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
+CK GKV + ++F G +++TY T+++G C +G EA L+ +M E+G P+
Sbjct: 511 MCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPD 570
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEM 474
+ TYN LI + G+ ++ EM
Sbjct: 571 SGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 135/269 (50%), Gaps = 2/269 (0%)
Query: 220 EVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYT 279
+++ AV + +M+ P++V ++ ++ A D + + ++ + G + + TY+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 280 VLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRK 339
+L++ FCR+ +L A+ V+ M + G +P+ VT ++ +C + +AV+L+ MV
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 340 GHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHWLCKKGKVLEA 398
G+ P S ++ L A V R++ K C D +++ LCK+G + A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 399 RNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
++ ++ E G + ++ YNT+I LC + +A L+ +M KG PN TYN LI
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 458 FCKVGNAKEGIRILEEMCENGCLPNKSTY 486
C G + R+L +M E PN T+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTF 329
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 115/255 (45%), Gaps = 35/255 (13%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PNVV+ N L+K CK V+ + + EM GLV N V+YTT++ G+ + D A V
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIV 453
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+++ G PD TY++L+DG C G++ A+ V + ++ + ++P+ TY +MIE CK
Sbjct: 454 FKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K + +L + KG P+
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNV----------------------------------VTY 539
Query: 383 STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+T++ C+KG EA +F E E G + TYNTLI G+ +A L +M
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Query: 442 KGRAPNAFTYNLLIN 456
+A T L+ N
Sbjct: 600 CRFVGDASTIGLVTN 614
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 101/250 (40%), Gaps = 35/250 (14%)
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
+D A+ + G+++ P ++ L+ + + I + + M+ G+ N TY +
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKIC 375
+I +C+ + A+ +L M++ G+ P
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEP-------------------------------- 149
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAAR 434
D ++L++ C ++ +A ++ + E G T+NTLI GL EA
Sbjct: 150 --DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXX 494
L D MV KG P+ TY +++NG CK G+ + +L++M + P Y
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267
Query: 495 XXXXMNQEIN 504
+N +N
Sbjct: 268 NYKNVNDALN 277
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 125/303 (41%), Gaps = 38/303 (12%)
Query: 60 KLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLP-YRAIFLKLSRARCFPEMESLLST 118
KL +I R DP IF ++ + H L + +F + CFP + + +
Sbjct: 347 KLYDEMIKRSIDP----DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Query: 119 LPRHSPQQFLDHCGE--------------DPLVTAIRGYGLAGKPDSALRTFLRIESRLG 164
+ + +D E T I G+ A + D+A F ++ S G
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD-G 461
Query: 165 IRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVA 224
+ P + N + A VF+ + R + P++ + NI+++ +CK +VE
Sbjct: 462 VLPDIMTYSILLDGLCNNGKVETALVVFEYLQ-RSKMEPDIYTYNIMIEGMCKAGKVEDG 520
Query: 225 VRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDG 284
+ + G+ PNVV+YTT+M G+ +G + A + E+ ++G PD+ TY L+
Sbjct: 521 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Query: 285 FCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS 344
R G A+ +++ +M C++ + L+ +M+ G +
Sbjct: 581 HLRDGDKAASAELIREMRS-----------------CRFVGDASTIGLVTNMLHDGRLDK 623
Query: 345 SGL 347
S L
Sbjct: 624 SFL 626
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/330 (30%), Positives = 175/330 (53%), Gaps = 4/330 (1%)
Query: 147 GKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVV 206
G D+A+ F +E++ GI+ SV + + + K+ +R + PNV+
Sbjct: 242 GCIDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVI 299
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+ N+LL K +++ A + EM+ G+ PN+++Y T+M GY + + A +L +
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
+ +PD T+T L+ G+C R+ +KV ++ + G+ N VTY ++++ +C+ K
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STL 385
A L ++MV G +P ++D LC+ G +E+A E++ L+K V +T+
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 386 IHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
I +CK GKV +A N+F V +++TY +I+GLC++G L EA L M E G
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Query: 445 APNAFTYNLLINGFCKVGNAKEGIRILEEM 474
APN TYN LI + G+ +++EEM
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 164/301 (54%), Gaps = 3/301 (0%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A S+FK T+ G+ +VV+ N L++ LCK + +L +M+ +VPNV+++ ++
Sbjct: 247 AISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLL 305
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
+ G + A + E++ +G +P+ TY L+DG+C Q RL A ++D M N
Sbjct: 306 DVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS 365
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P+ VT+ +I+ YC K+ + + + ++ ++G V ++ +V C+ G ++ A E+
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 368 WR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCE 425
++ ++ D L+ LC GK+ +A +FE+ + + ++ Y T+I G+C+
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
G++ +A L+ + KG PN TY ++I+G CK G+ E +L +M E+G PN T
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 486 Y 486
Y
Sbjct: 546 Y 546
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 157/291 (53%), Gaps = 2/291 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P+ + N L+K L +V AV ++D M+ G P+VV+Y +++ G GD
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ +L ++ ++ D TY+ ++D CR G + AAI + +ME G++ + VTY ++
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
CK K + LL+DMV + VP+ ++DV +EG ++ A E+++ + S
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 378 DNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARL 435
N + +TL+ C + ++ EA N+ + + ++T+ +LI G C + + ++
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKV 390
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ ++ ++G NA TY++L+ GFC+ G K + +EM +G LP+ TY
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 188/396 (47%), Gaps = 17/396 (4%)
Query: 66 ISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQ 125
I R D L+L + R + R Y I L R C SL + +
Sbjct: 203 ICRSGDTSLALDLLRKME--ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260
Query: 126 QFLDHCGEDPLVT---AIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQN 182
+VT +RG AGK + + SR I P+V V+
Sbjct: 261 S--------SVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-EIVPNVITFNVLLDVFVKE 311
Query: 183 KRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVS 242
+ + A+ ++K TR G+SPN+++ N L+ C N + A +LD M+ P++V+
Sbjct: 312 GKLQEANELYKEMITR-GISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVT 370
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
+T+++ GY +D M+V + +G +A TY++LV GFC+ G++ A ++ +M
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 303 ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVE 362
+GV P+ +TYG++++ C K +A+ + ED+ + + +++ +C+ G VE
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 363 RACEVWRVLRKICGSDNTVAST-LIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLI 420
A ++ L N + T +I LCKKG + EA + + E G+ + TYNTLI
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 421 AGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLIN 456
G+L +A+L ++M G + +A + ++I+
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 149/290 (51%), Gaps = 4/290 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++ N+ + NI++ C+ + A VL +++ +G P+ ++ T++ G G + A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ ++ +++ G PD TY +V+G CR G A+ ++ MEE V+ + TY +I++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKICGS 377
C+ A++L ++M KG S +V LC+ G + + V R+I +
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLW 436
T + L+ K+GK+ EA +++E G +++TYNTL+ G C + L EA +
Sbjct: 298 VITF-NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
D MV +P+ T+ LI G+C V +G+++ + + G + N TY
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTY 406
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 112/229 (48%), Gaps = 4/229 (1%)
Query: 129 DHCGED--PLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHR 186
+ C D + I+GY + + D ++ F I R G+ + Q+ + +
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKR-GLVANAVTYSILVQGFCQSGKIK 420
Query: 187 LAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTV 246
LA +F+ + GV P+V++ ILL LC ++E A+ + +++ + +V YTT+
Sbjct: 421 LAEELFQEMVSH-GVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 247 MGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
+ G G ++ A + + KG P+ TYTV++ G C++G L A ++ MEE+G
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Query: 307 QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVL 355
PN+ TY +I A+ + + L+E+M G + V+D+L
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 37/267 (13%)
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
D A+ + E++ P ++ R + + +E NG+ N T +M
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIM 129
Query: 317 IEAYCKW-----------------------------------KKPGEAVNLLEDMVRKGH 341
I +C+ K EAV L++ MV G
Sbjct: 130 INCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSDNTVASTLIHWLCKKGKVLEARN 400
P +V+ +C G+ A ++ R + + +D ST+I LC+ G + A +
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 401 VFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFC 459
+F+E E G +S++TYN+L+ GLC+ G+ + A L DMV + PN T+N+L++ F
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFV 309
Query: 460 KVGNAKEGIRILEEMCENGCLPNKSTY 486
K G +E + +EM G PN TY
Sbjct: 310 KEGKLQEANELYKEMITRGISPNIITY 336
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 131/500 (26%), Positives = 223/500 (44%), Gaps = 59/500 (11%)
Query: 40 LPESYTIQPPIKPWPHR----LHPKLLASLISRQHDPHLSLQ------IFRHAQTHHRAS 89
LP+ +T I + L K LA L+SR + PH S + + Q
Sbjct: 18 LPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAED 77
Query: 90 SHHPLP-----------------------YRAIFLKLSRAR------CFPEMESLLSTLP 120
H +P R+ L L R C P++ S S
Sbjct: 78 IVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFN 137
Query: 121 RHSPQQFLDH----------CGEDPLVTA---IRGYGLAGKPDSALRTFLRIESRLGIRP 167
S + LD C +VT I + +G+ AL++F ++ R + P
Sbjct: 138 GFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMK-RDALSP 196
Query: 168 SVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRV 227
+V + +A S++K R R +S NVV+ L+ CK E++ A +
Sbjct: 197 NVVTFTCLIDGYCKAGDLEVAVSLYKEMR-RVRMSLNVVTYTALIDGFCKKGEMQRAEEM 255
Query: 228 LDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCR 287
M+ + PN + YTT++ G+ RGD D AM+ L ++L++G D T Y V++ G C
Sbjct: 256 YSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCG 315
Query: 288 QGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGL 347
G+L A ++++DME++ + P+ V + M+ AY K + AVN+ ++ +G P
Sbjct: 316 NGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVA 375
Query: 348 CCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-E 406
++D + + G + A V+ + K +++ + + LI LCK+G +E +F + E
Sbjct: 376 LSTMIDGIAKNGQLHEAI-VYFCIEK---ANDVMYTVLIDALCKEGDFIEVERLFSKISE 431
Query: 407 GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKE 466
G V Y + IAGLC++G L +A +L MV++G + Y LI G G E
Sbjct: 432 AGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVE 491
Query: 467 GIRILEEMCENGCLPNKSTY 486
++ +EM +G P+ + +
Sbjct: 492 ARQVFDEMLNSGISPDSAVF 511
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 156/333 (46%), Gaps = 16/333 (4%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G +P+ S N ++ +CK+ +V+ A ++ M G P+V+SY +++ G+ GD+ A
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSA 110
Query: 260 MRVLGEV-LDKGW--APDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
VL + G+ PD ++ L +GF + L M M + PN VTY
Sbjct: 111 SLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTW 169
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG 376
I+ +CK + A+ M R P+ ++D C+ G++E A +++ +R++
Sbjct: 170 IDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 377 SDNTVAST-LIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAAR 434
S N V T LI CKKG++ A ++ V + L Y T+I G +RG+ A +
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXX 494
M+ +G + Y ++I+G C G KE I+E+M ++ +P+ +
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 495 XXXXMNQEIN---KVV-------ALAMSTGVDG 517
M +N K++ +A+ST +DG
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDG 382
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 96/209 (45%), Gaps = 7/209 (3%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNS 195
T + Y +G+ +A+ + ++ R G P V +N + A F
Sbjct: 341 FTTMMNAYFKSGRMKAAVNMYHKLIER-GFEPDVVALSTMIDGIAKNGQLHEAIVYFCIE 399
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
+ N V +L+ ALCK + R+ ++ GLVP+ YT+ + G +G+
Sbjct: 400 K------ANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGN 453
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
+ A ++ ++ +G D YT L+ G +G +V A +V D+M +G+ P+ + +
Sbjct: 454 LVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDL 513
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPS 344
+I AY K A +LL DM R+G V +
Sbjct: 514 LIRAYEKEGNMAAASDLLLDMQRRGLVTA 542
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 110/260 (42%), Gaps = 32/260 (12%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I G+ G D+A++ ++ ++ G+R + N + + A + ++
Sbjct: 273 TIIDGFFQRGDSDNAMKFLAKMLNQ-GMRLDITAYGVIISGLCGNGKLKEATEIVEDME- 330
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ + P++V ++ A K ++ AV + +++ G P+VV+ +T++ G A G +
Sbjct: 331 KSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLH 390
Query: 258 GAM------------------------------RVLGEVLDKGWAPDATTYTVLVDGFCR 287
A+ R+ ++ + G PD YT + G C+
Sbjct: 391 EAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK 450
Query: 288 QGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGL 347
QG LV A K+ M + G+ + + Y +I EA + ++M+ G P S +
Sbjct: 451 QGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAV 510
Query: 348 CCKVVDVLCEEGNVERACEV 367
++ +EGN+ A ++
Sbjct: 511 FDLLIRAYEKEGNMAAASDL 530
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 155/291 (53%), Gaps = 3/291 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G +P+V+ C L+K + + AVRV++ + G P+V +Y ++ G+ +D
Sbjct: 117 RKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRID 175
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A RVL + K ++PD TY +++ C +G+L A+KV++ + + QP +TY ++I
Sbjct: 176 DATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILI 235
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICG 376
EA EA+ L+++M+ +G P ++ +C+EG V+RA E+ R L K C
Sbjct: 236 EATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE 295
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARL 435
D + L+ L +GK E + + F +++TY+ LI LC G++ EA L
Sbjct: 296 PDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNL 355
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M EKG P+A++Y+ LI FC+ G I LE M +GCLP+ Y
Sbjct: 356 LKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNY 406
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 146/291 (50%), Gaps = 3/291 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+FG P+V + N L+ CK+N ++ A RVLD M P+ V+Y ++G RG +D
Sbjct: 152 KFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLD 210
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A++VL ++L P TYT+L++ +G + A+K+MD+M G++P+ TY +I
Sbjct: 211 LALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICG 376
CK A ++ ++ KG P ++ L +G E ++ ++ + C
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARL 435
+ S LI LC+ GK+ EA N+ + E G +Y+ LIA C G L A
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ M+ G P+ YN ++ CK G A + + I ++ E GC PN S+Y
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSY 441
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 170/384 (44%), Gaps = 39/384 (10%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I G+ + D A R R+ S+ P + LA V N
Sbjct: 165 INGFCKMNRIDDATRVLDRMRSK-DFSPDTVTYNIMIGSLCSRGKLDLALKVL-NQLLSD 222
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
P V++ IL++A V+ A++++DEML GL P++ +Y T++ G G +D A
Sbjct: 223 NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRA 282
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ + KG PD +Y +L+ QG+ K+M M PN VTY ++I
Sbjct: 283 FEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITT 342
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSD 378
C+ K EA+NLL+ M KG P + ++ C EG ++ A E ++ C D
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF---------------------EGGSVASL---- 413
+T++ LCK GK +A +F + G + +L
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL 462
Query: 414 -----------LTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
+TYN++I+ LC G + EA L DM P+ TYN+++ GFCK
Sbjct: 463 EMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAH 522
Query: 463 NAKEGIRILEEMCENGCLPNKSTY 486
++ I +LE M NGC PN++TY
Sbjct: 523 RIEDAINVLESMVGNGCRPNETTY 546
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 158/337 (46%), Gaps = 4/337 (1%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I L G D AL+ + SR G++P + + A + +N +
Sbjct: 235 IEATMLEGGVDEALKLMDEMLSR-GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELK- 292
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P+V+S NILL+AL + E +++ +M PNVV+Y+ ++ G ++ A
Sbjct: 293 GCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEA 352
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
M +L + +KG PDA +Y L+ FCR+GRL AI+ ++ M +G P+ V Y ++
Sbjct: 353 MNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLAT 412
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSD 378
CK K +A+ + + G P+S + L G+ RA + ++ D
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWD 437
+++I LC++G V EA + + S++TYN ++ G C+ + +A + +
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
MV G PN TY +LI G G E + + ++
Sbjct: 533 SMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 157/287 (54%), Gaps = 15/287 (5%)
Query: 186 RLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTT 245
RL H + K SRTR P+V + + L+ ALCK N+++ A + DEM GL+PN V +TT
Sbjct: 296 RLKHQMEK-SRTR----PDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTT 350
Query: 246 VMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
++ G++ G++D ++L KG PD Y LV+GFC+ G LVAA ++D M G
Sbjct: 351 LIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRG 410
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKG----HVPSSGLCCKVVDVLCEEGNV 361
++P+++TY +I+ +C+ A+ + ++M + G V S L C +C+EG V
Sbjct: 411 LRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCG----MCKEGRV 466
Query: 362 ERACEVWR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTL 419
A R +LR D+ + ++ CKKG + +E + G V S++TYN L
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVL 526
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKE 466
+ GLC+ G++ A L D M+ G P+ TYN L+ G + N+ +
Sbjct: 527 LNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK 573
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 147/301 (48%), Gaps = 3/301 (0%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A VF + T+ + P VVS N L+ CKV ++ R+ +M P+V +Y+ ++
Sbjct: 259 AQKVF-DEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
MDGA + E+ +G P+ +T L+ G R G + + M G+Q
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P+ V Y ++ +CK A N+++ M+R+G P ++D C G+VE A E+
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 368 WRVL-RKICGSDNTVASTLIHWLCKKGKVLEA-RNVFEEFEGGSVASLLTYNTLIAGLCE 425
+ + + D S L+ +CK+G+V++A R + E G +TY ++ C+
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCK 497
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+G+ +L +M G P+ TYN+L+NG CK+G K +L+ M G +P+ T
Sbjct: 498 KGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDIT 557
Query: 486 Y 486
Y
Sbjct: 558 Y 558
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G NV NIL+ CK + A +V DE+ L P VVS+ T++ GY G++D
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
R+ ++ PD TY+ L++ C++ ++ A + D+M + G+ PN+V + +I
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHG 354
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSD 378
+ + + + M+ KG P L +V+ C+ G++ A + ++R+ D
Sbjct: 355 HSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPD 414
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWD 437
+TLI C+ G V A + +E + + + ++ L+ G+C+ G + +A R
Sbjct: 415 KITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALR 474
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M+ G P+ TY ++++ FCK G+A+ G ++L+EM +G +P+ TY
Sbjct: 475 EMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTY 523
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 122/225 (54%), Gaps = 3/225 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P++V N L+ CK ++ A ++D M+ GL P+ ++YTT++ G+ GD++ A
Sbjct: 375 GLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETA 434
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + E+ G D ++ LV G C++GR++ A + + +M G++P++VTY +M++A
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSD 378
+CK LL++M GHVPS +++ LC+ G ++ A + + I D
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGL 423
+ +TL+ + ++ ++ E G VA L +Y +++ L
Sbjct: 555 DITYNTLLEGHHRHAN--SSKRYIQKPEIGIVADLASYKSIVNEL 597
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 155/293 (52%), Gaps = 6/293 (2%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P++V+ + LL C + AV ++D+M+ MG P+ ++TT++ G
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ +++ +G PD TY +V+G C++G + A+ ++ ME+ ++ + V Y +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTII 265
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKIC 375
+ CK+K +A+NL +M KG P ++ LC G A + + RKI
Sbjct: 266 DGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKI- 324
Query: 376 GSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAA 433
+ N V S LI K+GK++EA +++E S+ + TY++LI G C L EA
Sbjct: 325 -NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 383
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+++ M+ K PN TY+ LI GFCK +EG+ + EM + G + N TY
Sbjct: 384 HMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 158/286 (55%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++V N LL A+ K+N+ E+ + + ++M +G+ ++ +Y+ + + R + A+ V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
L +++ G+ PD T + L++G+C R+ A+ ++D M E G +P+ T+ +I
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-ICGSDNTV 381
K EAV L++ MV++G P VV+ LC+ G+++ A + + + K +D +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMV 440
+T+I LCK + +A N+F E + + + TY++LI+ LC G +A+RL DM+
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
E+ PN T++ LI+ F K G E ++ +EM + P+ TY
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 366
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 158/289 (54%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+V + + L+ LC A R+L +M+ + PNVV+++ ++ + G + A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ E++ + PD TY+ L++GFC RL A + + M PN VTY +I+
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+CK K+ E + L +M ++G V ++ ++ + + + A V++ + + N
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPN 467
Query: 380 TVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWD 437
+ + L+ LCK GK+ +A VFE + ++ + TYN +I G+C+ G++ + L+
Sbjct: 468 ILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFC 527
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ KG +PN YN +I+GFC+ G+ +E +L++M E+G LPN TY
Sbjct: 528 NLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTY 576
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 168/350 (48%), Gaps = 4/350 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I G D AL F ++++ GIRP V R A + +
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNK-GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R ++PNVV+ + L+ A K ++ A ++ DEM+ + P++ +Y++++ G+ +D
Sbjct: 322 R-KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A + ++ K P+ TY+ L+ GFC+ R+ +++ +M + G+ N VTY +I
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICG 376
+ + + A + + MV G P+ ++D LC+ G + +A V+ L R
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARL 435
D + +I +CK GKV + +F V+ +++ YNT+I+G C +G EA L
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
M E G PN+ TYN LI + G+ + +++EM G + ST
Sbjct: 561 LKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 144/279 (51%), Gaps = 2/279 (0%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
IL L + +V+ AV + +M+ P++V + ++ A + + + ++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G + D TY++ ++ FCR+ +L A+ V+ M + G +P+ VT ++ YC K+ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHW 388
V L++ MV G+ P + ++ L A V +++++ C D T+++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 389 LCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
LCK+G + A ++ ++ E G + A ++ YNT+I GLC+ + +A L+ +M KG P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
FTY+ LI+ C G + R+L +M E PN T+
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 331
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 121/256 (47%), Gaps = 37/256 (14%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PNVV+ + L+K CK VE + + EM GLV N V+YTT++ G+ D D A V
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 455
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+++ G P+ TY +L+DG C+ G+L A+ V + ++ + ++P+ TY +MIE CK
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K + L ++ KG P N +A
Sbjct: 516 AGKVEDGWELFCNLSLKGVSP-----------------------------------NVIA 540
Query: 383 -STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMV 440
+T+I C+KG EA ++ ++ E G + + TYNTLI G+ +A L +M
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMR 600
Query: 441 EKGRAPNAFTYNLLIN 456
G A +A T L+ N
Sbjct: 601 SCGFAGDASTIGLVTN 616
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 121/273 (44%), Gaps = 23/273 (8%)
Query: 60 KLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLP-YRAIFLKLSRARCFPEMESLLST 118
KL +I R DP IF ++ + H L + +F + CFP + + ST
Sbjct: 349 KLYDEMIKRSIDP----DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTY-ST 403
Query: 119 LPR--------HSPQQFLDHCGEDPLV-------TAIRGYGLAGKPDSALRTFLRIESRL 163
L + + + LV T I G+ A D+A F ++ S +
Sbjct: 404 LIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-V 462
Query: 164 GIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEV 223
G+ P++ +N + A VF+ + R + P++ + NI+++ +CK +VE
Sbjct: 463 GVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ-RSTMEPDIYTYNIMIEGMCKAGKVED 521
Query: 224 AVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVD 283
+ + G+ PNV++Y T++ G+ +G + A +L ++ + G P++ TY L+
Sbjct: 522 GWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIR 581
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
R G A+ +++ +M G + T G++
Sbjct: 582 ARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 175/350 (50%), Gaps = 4/350 (1%)
Query: 137 VTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSR 196
T I G G+ + A F + +LG+ + R +N + +++ +
Sbjct: 202 TTLIDGCCKKGEIEKAKDLFFEM-GKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
GV PN+ + N ++ LCK + A +V DEM G+ N+V+Y T++GG +
Sbjct: 261 ED-GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
+ A +V+ ++ G P+ TY L+DGFC G+L A+ + D++ G+ P+ VTY ++
Sbjct: 320 NEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-C 375
+ +C+ A ++++M +G PS ++D N+E+A ++ + ++
Sbjct: 380 VSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGL 439
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAAR 434
D S LIH C KG++ EA +F+ E + + YNT+I G C+ G A +
Sbjct: 440 VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALK 499
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
L +M EK APN +Y +I CK +KE R++E+M ++G P+ S
Sbjct: 500 LLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTS 549
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/329 (30%), Positives = 158/329 (48%), Gaps = 41/329 (12%)
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLV------------------- 237
T FG SPNVV L+ CK E+E A + EM +GLV
Sbjct: 190 TEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVK 249
Query: 238 ----------------PNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVL 281
PN+ +Y VM G A +V E+ ++G + + TY L
Sbjct: 250 KQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTL 309
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
+ G CR+ +L A KV+D M+ +G+ PN +TY +I+ +C K G+A++L D+ +G
Sbjct: 310 IGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGL 369
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAST-LIHWLCKKG---KVLE 397
PS +V C +G+ A ++ + + + + V T LI + K ++
Sbjct: 370 SPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 398 ARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
R EE G V + TY+ LI G C +G++ EA+RL+ MVEK PN YN +I G
Sbjct: 430 LRLSMEEL--GLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILG 487
Query: 458 FCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+CK G++ +++L+EM E PN ++Y
Sbjct: 488 YCKEGSSYRALKLLKEMEEKELAPNVASY 516
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 153/298 (51%), Gaps = 37/298 (12%)
Query: 190 SVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGG 249
S F ++++ V +V S IL+K C+ E+E + +L E+ G PNVV YTT++ G
Sbjct: 150 SFFNENKSK--VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDG 207
Query: 250 YAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
+G+++ A + E+ G + TYTVL++G + G ++ + M+E+GV PN
Sbjct: 208 CCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPN 267
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
TY ++ CK + +A + ++M + G+ C +V
Sbjct: 268 LYTYNCVMNQLCKDGRTKDAFQVFDEMRER------GVSCNIV----------------- 304
Query: 370 VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGE 428
+TLI LC++ K+ EA V ++ + + +L+TYNTLI G C G+
Sbjct: 305 -----------TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L +A L D+ +G +P+ TYN+L++GFC+ G+ ++++EM E G P+K TY
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 115/256 (44%), Gaps = 41/256 (16%)
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCK---------------------- 350
Y V+I +Y + + +++ +MV G VP S C
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSN-CFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 351 ----VVDVL---------CEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVL 396
V+DV CE G +E++ ++ L + S N V +TLI CKKG++
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 397 EARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLI 455
+A+++F E + G VA+ TY LI GL + G + +++ M E G PN +TYN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 456 NGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXMNQEINKVVALAMSTGV 515
N CK G K+ ++ +EM E G N TY +N E NKVV S G+
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLN-EANKVVDQMKSDGI 334
Query: 516 DGEL--WDLLVKHVVG 529
+ L ++ L+ G
Sbjct: 335 NPNLITYNTLIDGFCG 350
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 155/291 (53%), Gaps = 2/291 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G+S N+ + NIL+ C+ +++ +A+ +L +M+ +G P++V+ ++++ GY +
Sbjct: 38 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 97
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ ++++ G+ PD T+T L+ G + A+ ++D M + G QPN VTYGV++
Sbjct: 98 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 157
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
CK A NLL M + ++D LC+ +V+ A +++ +
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 378 DNTVA-STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARL 435
N V S+LI LC G+ +A + + E +L+T+N LI + G+ EA +L
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
DDM+++ P+ FTYN LINGFC + ++ E M C P+ TY
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTY 328
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 162/289 (56%), Gaps = 8/289 (2%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++ N LL A+ K+ + ++ + + ++M +G+ N+ +Y ++ + R + A+ +
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG+++ G+ P T + L++G+C R+ A+ ++D M E G +P+ +T+ +I
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI----CGSD 378
K EAV L++ MV++G P+ VV+ LC+ G+++ A + +L K+ +D
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA---FNLLNKMEAAKIEAD 184
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWD 437
+ +T+I LCK V +A N+F+E E + +++TY++LI+ LC G +A++L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
DM+EK PN T+N LI+ F K G E ++ ++M + P+ TY
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTY 293
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 175/389 (44%), Gaps = 41/389 (10%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNS 195
T I G L K A+ R+ R G +P++ + LA ++ N
Sbjct: 118 FTTLIHGLFLHNKASEAVALVDRMVQR-GCQPNLVTYGVVVNGLCKRGDIDLAFNLL-NK 175
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
+ +VV N ++ +LCK V+ A+ + EM G+ PNVV+Y++++ G
Sbjct: 176 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 235
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
A ++L ++++K P+ T+ L+D F ++G+ V A K+ DDM + + P+ TY
Sbjct: 236 WSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL--RK 373
+I +C + +A + E MV K P ++ C+ VE E++R + R
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355
Query: 374 ICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEA 432
+ G D +TLI L G A+ VF++ V ++TY+ L+ GLC G+L +A
Sbjct: 356 LVG-DTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKA 414
Query: 433 ARLWD---------------DMVE--------------------KGRAPNAFTYNLLING 457
++D M+E KG PN TYN +I+G
Sbjct: 415 LEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISG 474
Query: 458 FCKVGNAKEGIRILEEMCENGCLPNKSTY 486
C +E +L++M E+G LP+ TY
Sbjct: 475 LCSKRLLQEAYALLKKMKEDGPLPDSGTY 503
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 159/327 (48%), Gaps = 4/327 (1%)
Query: 150 DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCN 209
D AL F +E++ GIRP+V R A + + + ++PN+V+ N
Sbjct: 202 DDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFN 259
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
L+ A K + A ++ D+M+ + P++ +Y +++ G+ +D A ++ ++ K
Sbjct: 260 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
PD TY L+ GFC+ R+ ++ +M G+ + VTY +I+ A
Sbjct: 320 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 379
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHW 388
+ + MV G P ++D LC G +E+A EV+ ++K D + +T+I
Sbjct: 380 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 439
Query: 389 LCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
+CK GKV + ++F G +++TYNT+I+GLC + L EA L M E G P+
Sbjct: 440 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPD 499
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEM 474
+ TYN LI + G+ ++ EM
Sbjct: 500 SGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 114/255 (44%), Gaps = 35/255 (13%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++ + N L+K CK VE + EM GLV + V+YTT++ G GD D A +V
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+++ G PD TY++L+DG C G+L A++V D M+++ ++ + Y MIE CK
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K + +L + KG P NV
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKP----------------NV------------------VTY 468
Query: 383 STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+T+I LC K + EA + ++ E G + TYNTLI G+ +A L +M
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 528
Query: 442 KGRAPNAFTYNLLIN 456
+A T L+ N
Sbjct: 529 CRFVGDASTIGLVAN 543
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 173/351 (49%), Gaps = 4/351 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T ++G AG + A L+ LG P N++ A V++ +
Sbjct: 289 TLLKGLFKAGMVEDA-ENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETA-V 346
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
GV N +C+ILL ALCK ++E A +L + GLVPN V Y T++ GY +GD+
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLV 406
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
GA + + +G PD Y L+ FC G + A K ++ M+ GV P+ TY ++I
Sbjct: 407 GARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILI 466
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
Y + + + ++L++M G +P+ +++ LC+ + A V R + S
Sbjct: 467 GGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVS 526
Query: 378 DNT-VASTLIHWLCKKGKVLEA-RNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARL 435
+ + LI C KGK+ +A R E + G +L+TYNTLI GL G+L EA L
Sbjct: 527 PKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDL 586
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ KG P+ FTYN LI+G+ GN + I + EEM +G P TY
Sbjct: 587 LLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 151/288 (52%), Gaps = 2/288 (0%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ P+V N+L+ LCK + A ++ DEML L+P++++Y T++ GY G+ + +
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+V + P T+ L+ G + G + A V+ +M++ G P+ T+ ++ + Y
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDN 379
+K A+ + E V G ++ C +++ LC+EG +E+A E+ R + K +
Sbjct: 330 SSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNE 389
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+ +T+I C+KG ++ AR E E G L YN LI CE GE+ A + +
Sbjct: 390 VIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNK 449
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M KG +P+ TYN+LI G+ + + IL+EM +NG +PN +Y
Sbjct: 450 MKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 143/314 (45%), Gaps = 33/314 (10%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GVSP+V + NIL+ + E + +L EM G +PNVVSY T++ + A
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
V ++ D+G +P Y +L+DG C +G++ A + +M + G++ N VTY +I+
Sbjct: 514 QIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDG 573
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK------ 373
K EA +LL ++ RKG P ++ GNV+R ++ +++
Sbjct: 574 LSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 374 ---------ICGS-----------------DNTVASTLIHWLCKKGKVLEARNVFEEFEG 407
+C D V + ++H G + +A N+ ++
Sbjct: 634 LKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
Query: 408 GSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKE 466
S+ TYN+LI G + G+LCE L D+M + P A TYN+++ G C+V +
Sbjct: 694 KSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMS 753
Query: 467 GIRILEEMCENGCL 480
EM E G L
Sbjct: 754 AYVWYREMQEKGFL 767
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 155/338 (45%), Gaps = 10/338 (2%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I GYG + D +E G P+V + + A V ++ R
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDN-GTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDR- 523
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GVSP V N+L+ C ++E A R EML G+ N+V+Y T++ G + G + A
Sbjct: 524 GVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+L E+ KG PD TY L+ G+ G + I + ++M+ +G++P TY ++I
Sbjct: 584 EDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISL 643
Query: 320 YCKWKKPGEAVNLLEDMVRKGHV-PSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGS 377
K E + L E + + + P + V+ G++E+A + + ++ K G
Sbjct: 644 CTK-----EGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGL 698
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLW 436
D T ++LI K GK+ E R++ +E + TYN ++ G CE + A +
Sbjct: 699 DKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWY 758
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+M EKG + N L++G + +KE ++ EM
Sbjct: 759 REMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEM 796
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 4/221 (1%)
Query: 268 DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG 327
++G P + + T+L+D + + I V ++ E+ +P++ YG I+A K G
Sbjct: 137 NEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVG 196
Query: 328 EAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL--RKICGSDNTVASTL 385
+ + L M PS + ++D LC+ + A +++ + R++ S T +TL
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITY-NTL 255
Query: 386 IHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
I CK G ++ V E + + SL+T+NTL+ GL + G + +A + +M + G
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315
Query: 445 APNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
P+AFT+++L +G+ A+ + + E ++G N T
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/291 (30%), Positives = 153/291 (52%), Gaps = 2/291 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P++V+ + LL C + AV ++D+M+ MG P+ ++TT++ G
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ +++ +G PD TY +V+G C++G + A+ +++ ME ++ N V + +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICG 376
++ CK++ AV+L +M KG P+ +++ LC G A + +L K
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARL 435
+ + LI K+GK++EA + EE S+ +TYN LI G C L EA ++
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM 385
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ MV K PN TYN LINGFCK ++G+ + EM + G + N TY
Sbjct: 386 FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 155/286 (54%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++V N LL A+ K+N+ E+ + + ++M +G+ ++ +Y+ + + R + A+ V
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
L +++ G+ PD T + L++G+C R+ A+ ++D M E G +P+ T+ +I
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K EAV L++ MV++G P VV+ LC+ G+++ A + + N V
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260
Query: 383 -STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMV 440
+T+I LCK V A ++F E E + +++TYN+LI LC G +A+RL +M+
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
EK PN T+N LI+ F K G E ++ EEM + P+ TY
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITY 366
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 169/351 (48%), Gaps = 7/351 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T + G G D AL ++E+ I+ +V + + +A +F T
Sbjct: 228 TVVNGLCKRGDIDLALNLLNKMEAA-RIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G+ PNVV+ N L+ LC A R+L ML + PNVV++ ++ + G +
Sbjct: 287 K-GIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLV 345
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ E++ + PD TY +L++GFC RL A ++ M PN TY +I
Sbjct: 346 EAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICG 376
+CK K+ + V L +M ++G V ++ ++ + G+ + A V++ ++
Sbjct: 406 NGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVP 465
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARL 435
+D S L+H LC GK+ A +F+ + + ++ YNT+I G+C+ G++ EA
Sbjct: 466 TDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA--- 522
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
WD P+ TYN +I+G C +E + +M E+G LPN TY
Sbjct: 523 WDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTY 573
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 156/290 (53%), Gaps = 2/290 (0%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G+S ++ + +I + C+ +++ +A+ VL +M+ +G P++V+ ++++ GY +
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+ ++ ++++ G+ PD T+T L+ G + A+ ++D M + G QP+ VTYG ++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
CK A+NLL M + + ++D LC+ +VE A +++ +
Sbjct: 232 GLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRP 291
Query: 379 NTVA-STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLW 436
N V ++LI+ LC G+ +A + E +++T+N LI + G+L EA +L
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++M+++ P+ TYNLLINGFC E ++ + M CLPN TY
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTY 401
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 139/279 (49%), Gaps = 2/279 (0%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
IL L + +V+ AV + +M+ P++V + ++ A + + + ++
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G + D TY++ ++ FCR+ +L A+ V+ M + G +P+ VT ++ YC K+ +A
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHW 388
V L++ MV G+ P + ++ L A V +++++ C D T+++
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 389 LCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
LCK+G + A N+ + E + A+++ +NT+I LC+ + A L+ +M KG PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
TYN LIN C G + R+L M E PN T+
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 112/255 (43%), Gaps = 38/255 (14%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PN+ + N L+ CK VE V + EM GLV N V+YTT++ G+ GD D A V
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMV 455
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+++ D TY++L+ G C G+L A+ + ++++ ++ N Y MIE CK
Sbjct: 456 FKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCK 515
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K GEA +L + K D
Sbjct: 516 AGKVGEAWDLFCSLSIK-------------------------------------PDVVTY 538
Query: 383 STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+T+I LC K + EA ++F + E G++ + TYNTLI + +A L +M
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Query: 442 KGRAPNAFTYNLLIN 456
G +A T +L+ N
Sbjct: 599 SGFVGDASTISLVTN 613
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A VFK + V ++++ +ILL LC +++ A+ + + + N+ Y T++
Sbjct: 452 AQMVFKQMVSN-RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G G + A + + K PD TY ++ G C + L A + M+E+G
Sbjct: 511 EGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
PN TY +I A + + L+++M G V + V ++L +G ++++
Sbjct: 568 PNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML-HDGRLDKS 623
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/293 (31%), Positives = 153/293 (52%), Gaps = 6/293 (2%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P++V+ + LL C + AV ++D+M M PN V++ T++ G
Sbjct: 143 KLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKAS 202
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ ++ +G PD TY +V+G C++G + A+ ++ ME+ ++ + V Y +I
Sbjct: 203 EAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTII 262
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKIC 375
+A C +K +A+NL +M KG P+ ++ LC G A + + RKI
Sbjct: 263 DALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI- 321
Query: 376 GSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAA 433
+ N V S LI K+GK++EA +++E S+ + TY++LI G C L EA
Sbjct: 322 -NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+++ M+ K PN TYN LI GFCK +EG+ + EM + G + N TY
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 433
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 155/289 (53%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ PNVV+ N L++ LC A R+L +M+ + PNVV+++ ++ + G + A
Sbjct: 285 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 344
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ E++ + PD TY+ L++GFC RL A + + M PN VTY +I+
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG 404
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSD 378
+CK K+ E + L +M ++G V ++ ++ L + G+ + A +++ +++ D
Sbjct: 405 FCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWD 437
S L+ LCK GK+ +A VFE + + + TYN +I G+C+ G++ + L+
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ KG PN Y +I+GFC+ G +E + EM E+G LPN TY
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 155/286 (54%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++V N LL A+ K+N+ ++ + + + M + + ++ SY ++ + R + A+ V
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG+++ G+ PD T + L++G+C R+ A+ ++D M QPN VT+ +I
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-ICGSDNTV 381
K EAV L++ MV +G P VV+ LC+ G+++ A + + + K +D +
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMV 440
+T+I LC V +A N+F E + + +++TYN+LI LC G +A+RL DM+
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
E+ PN T++ LI+ F K G E ++ +EM + P+ TY
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 363
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 148/286 (51%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PN V+ N L+ L N+ AV ++D M+ G P++ +Y TV+ G RGD+D A+ +
Sbjct: 183 PNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
L ++ D YT ++D C + A+ + +M+ G++PN VTY +I C
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTV 381
+ + +A LL DM+ + P+ ++D +EG + A +++ ++++ D
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 382 ASTLIHWLCKKGKVLEARNVFE-EFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMV 440
S+LI+ C ++ EA+++FE +++TYNTLI G C+ + E L+ +M
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++G N TYN LI G + G+ +I ++M +G P+ TY
Sbjct: 423 QRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 166/338 (49%), Gaps = 4/338 (1%)
Query: 150 DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCN 209
+ AL F ++++ GIRP+V R A + + R ++PNVV+ +
Sbjct: 272 NDALNLFTEMDNK-GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-KINPNVVTFS 329
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
L+ A K ++ A ++ DEM+ + P++ +Y++++ G+ +D A + ++ K
Sbjct: 330 ALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK 389
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
P+ TY L+ GFC+ R+ +++ +M + G+ N VTY +I+ + A
Sbjct: 390 DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMA 449
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHW 388
+ + MV G P ++D LC+ G +E+A V+ L+K D + +I
Sbjct: 450 QKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEG 509
Query: 389 LCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
+CK GKV + ++F G +++ Y T+I+G C +G EA L+ +M E G PN
Sbjct: 510 MCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPN 569
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+ TYN LI + G+ +++EM G + + ST
Sbjct: 570 SGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDAST 607
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 124/255 (48%), Gaps = 35/255 (13%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PNVV+ N L+K CK VE + + EM GLV N V+Y T++ G GD D A ++
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKI 452
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+++ G PD TY++L+DG C+ G+L A+ V + ++++ ++P+ TY +MIE CK
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K + +L + KG P NV +
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKP----------------NV------------------IIY 538
Query: 383 STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+T+I C+KG EA +F E E G++ + TYNTLI G+ +A L +M
Sbjct: 539 TTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS 598
Query: 442 KGRAPNAFTYNLLIN 456
G +A T +++IN
Sbjct: 599 CGFVGDASTISMVIN 613
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 120/254 (47%), Gaps = 5/254 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
+ I G+ + + D A F + S+ P+V + KR +F+
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQ 423
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G+ N V+ N L++ L + + ++A ++ +M+ G+ P++++Y+ ++ G G ++
Sbjct: 424 R-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLE 482
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ V + PD TY ++++G C+ G++ + + GV+PN + Y MI
Sbjct: 483 KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMI 542
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG- 376
+C+ EA L +M G +P+SG ++ +G+ + E+ + +R CG
Sbjct: 543 SGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRS-CGF 601
Query: 377 -SDNTVASTLIHWL 389
D + S +I+ L
Sbjct: 602 VGDASTISMVINML 615
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 97/308 (31%), Positives = 151/308 (49%), Gaps = 24/308 (7%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV N ++ + + LC + E A V+ EM+G G +P+ +Y+ V+ M+ A
Sbjct: 443 GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELA 502
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ E+ G D TYT++VD FC+ G + A K ++M E G PN VTY +I A
Sbjct: 503 FLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHA 562
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-- 377
Y K KK A L E M+ +G +P+ ++D C+ G VE+AC+++ ++CGS
Sbjct: 563 YLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF---ERMCGSKD 619
Query: 378 ------------DNT------VASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNT 418
DN+ L+ CK +V EAR + + G + + Y+
Sbjct: 620 VPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDA 679
Query: 419 LIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
LI GLC+ G+L EA + +M E G +TY+ LI+ + KV ++L +M EN
Sbjct: 680 LIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENS 739
Query: 479 CLPNKSTY 486
C PN Y
Sbjct: 740 CAPNVVIY 747
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 171/359 (47%), Gaps = 20/359 (5%)
Query: 146 AGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNV 205
AGK + A + + G P + LA +F+ + R G+ +V
Sbjct: 461 AGKYEKAFSVIREMIGQ-GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK-RGGLVADV 518
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGE 265
+ I++ + CK +E A + +EM +G PNVV+YT ++ Y + A +
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM----------------EENGVQPN 309
+L +G P+ TY+ L+DG C+ G++ A ++ + M ++N +PN
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
VTYG +++ +CK + EA LL+ M +G P+ + ++D LC+ G ++ A EV
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 370 VLRK--ICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERG 427
+ + + T +S + + K + L ++ + + E +++ Y +I GLC+ G
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ EA +L M EKG PN TY +I+GF +G + + +LE M G PN TY
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 147/299 (49%), Gaps = 22/299 (7%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+ V L+ LC+ + E A+ L+ M +PNVV+Y+T++ G + + RV
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
L ++ +G P + LV +C G A K++ M + G P V Y ++I + C
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 323 WKKPGEAVNL-LEDMVRKGH--VPSSGLCCKVVDV------LCEEGNVERACEVWRVLRK 373
K +++N L D+ K + + ++G+ ++V LC G E+A + V+R+
Sbjct: 420 DK---DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKA---FSVIRE 473
Query: 374 ICGS----DNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGE 428
+ G D + S ++++LC K+ A +FEE + GG VA + TY ++ C+ G
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAG- 532
Query: 429 LCEAARLW-DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L E AR W ++M E G PN TY LI+ + K + E M GCLPN TY
Sbjct: 533 LIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTY 591
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 125/274 (45%), Gaps = 4/274 (1%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PNVV+ LL CK + VE A ++LD M G PN + Y ++ G G +D A V
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
E+ + G+ TY+ L+D + + R A KV+ M EN PN V Y MI+ CK
Sbjct: 697 KTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 756
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTV 381
K EA L++ M KG P+ ++D G +E E+ R+ K +
Sbjct: 757 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVAS-LLTYNTLIAGLCERGELCEAARLWDDMV 440
LI CK G + A N+ EE + + Y +I G E E+ L D++
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFIESLGLLDEIG 874
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+ AP Y LLI+ K + +R+LEE+
Sbjct: 875 QDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 138/310 (44%), Gaps = 37/310 (11%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G PN + + L+ LCKV +++ A V EM G + +Y++++ Y D A
Sbjct: 669 GCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLA 728
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+VL ++L+ AP+ YT ++DG C+ G+ A K+M MEE G QPN VTY MI+
Sbjct: 729 SKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI----- 374
+ K + LLE M KG P+ ++D C+ G ++ A + +++
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848
Query: 375 ------------------------CGSDNT-----VASTLIHWLCKKGKVLEARNVFEE- 404
G D+T V LI L K ++ A + EE
Sbjct: 849 TAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Query: 405 --FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
F V TYN+LI LC ++ A +L+ +M +KG P ++ LI G +
Sbjct: 909 ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNS 968
Query: 463 NAKEGIRILE 472
E + +L+
Sbjct: 969 KISEALLLLD 978
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 138/294 (46%), Gaps = 12/294 (4%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PNVV+ + LL ++ RVL+ M+ G P+ + +++ Y GD A ++
Sbjct: 335 PNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKL 394
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGR------LVAAIKVMDDMEENGVQPNEVTYGVM 316
L +++ G P Y +L+ C L A K +M GV N++
Sbjct: 395 LKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSF 454
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG 376
C K +A +++ +M+ +G +P + KV++ LC +E A ++ +++ G
Sbjct: 455 TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKR--G 512
Query: 377 ---SDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEA 432
+D + ++ CK G + +AR F E E G +++TY LI + ++ A
Sbjct: 513 GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYA 572
Query: 433 ARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L++ M+ +G PN TY+ LI+G CK G ++ +I E MC + +P+ Y
Sbjct: 573 NELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY 626
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 26/237 (10%)
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
D V GE L+ VLV CR G A++ + +++ +P+ TY +
Sbjct: 193 DDDKEVFGEFLN-----------VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCL 241
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDV-LCEEGNVERACEVWRVLRKIC 375
I+A+ K + A +L+ + ++ G + LC+ G WR +
Sbjct: 242 IQAFLKADRLDSA-SLIHREMSLANLRMDGFTLRCFAYSLCKVGK-------WREALTLV 293
Query: 376 GSDNTVAST-----LIHWLCKKGKVLEARNVFEEFEGGS-VASLLTYNTLIAGLCERGEL 429
++N V T LI LC+ EA + S + +++TY+TL+ G + +L
Sbjct: 294 ETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQL 353
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
R+ + M+ +G P+ +N L++ +C G+ ++L++M + G +P Y
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVY 410
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 163/297 (54%), Gaps = 2/297 (0%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F +G+S ++ S IL+ C+ + + A+ VL +M+ +G P++V++ +++ G+
Sbjct: 93 FSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
+ A ++ ++ G+ P+ Y L+DG C+ G L A++++++ME+ G+ + V
Sbjct: 153 LVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVV 212
Query: 312 TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-V 370
TY ++ C + +A +L DM+++ P ++DV ++GN++ A E+++ +
Sbjct: 213 TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Query: 371 LRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGEL 429
++ +N +++I+ LC G++ +A+ F+ G +++TYNTLI+G C+ +
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV 332
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
E +L+ M +G + FTYN LI+G+C+VG + + I M P+ T+
Sbjct: 333 DEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITH 389
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 146/291 (50%), Gaps = 6/291 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G PNVV N L+ LCK E+ +A+ +L+EM GL +VV+Y T++ G + G A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
R+L +++ + PD T+T L+D F +QG L A ++ +M ++ V PN VTY +I
Sbjct: 231 ARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKIC---G 376
C + +A + M KG P+ ++ C+ V+ ++++ R C
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ--RMSCEGFN 348
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARL 435
+D +TLIH C+ GK+ A ++F V ++T+ L+ GLC GE+ A
Sbjct: 349 ADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVK 408
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+DDM E + YN++I+G CK ++ + + G P+ TY
Sbjct: 409 FDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 144/290 (49%), Gaps = 4/290 (1%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
N + G+ +VV+ N LL LC A R+L +M+ + P+VV++T ++ + +
Sbjct: 200 NEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQ 259
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
G++D A + E++ P+ TY +++G C GRL A K D M G PN VTY
Sbjct: 260 GNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTY 319
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV--WRVL 371
+I +CK++ E + L + M +G ++ C+ G + A ++ W V
Sbjct: 320 NTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 372 RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELC 430
R++ D L+H LC G++ A F++ E ++ YN +I GLC+ ++
Sbjct: 380 RRVT-PDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL 480
+A L+ + +G P+A TY ++I G CK G +E ++ M E G +
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 143/286 (50%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++V LL A + E + +M G+ ++ S+T ++ + + A+ V
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSV 128
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG+++ G+ P T+ L+ GFC R+ A ++ M ++G +PN V Y +I+ CK
Sbjct: 129 LGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK 188
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSDNTV 381
+ A+ LL +M +KG ++ LC G A + R ++++ D
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMV 440
+ LI K+G + EA+ +++E SV + +TYN++I GLC G L +A + +D M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
KG PN TYN LI+GFCK EG+++ + M G + TY
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I G+ D ++ F R+ G + Q + R+A +F +
Sbjct: 321 TLISGFCKFRMVDEGMKLFQRMSCE-GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVS 379
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R V+P++++ ILL LC E+E A+ D+M +V+Y ++ G ++
Sbjct: 380 R-RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
A + + +G PDA TYT+++ G C+ G A +++ M+E G+
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 148/279 (53%), Gaps = 2/279 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P++V+ LL C+ N + AV ++D M G G VPNVV Y TV+ G D++
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLN 201
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ V + KG DA TY L+ G GR A +++ DM + + PN + + +I
Sbjct: 202 NALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALI 261
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICG 376
+ + K EA NL ++M+R+ VP+ +++ C G + A ++ ++ K C
Sbjct: 262 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 321
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARL 435
D +TLI CK +V + +F E G V TYNTLI G C+ G+L A ++
Sbjct: 322 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
++ MV+ G +P+ TYN+L++ C G ++ + ++E++
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 167/363 (46%), Gaps = 40/363 (11%)
Query: 162 RLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCK---- 217
+LG RPS+ Q R + A S+ +S FG PNVV N ++ LCK
Sbjct: 142 KLGFRPSIVTLGSLLNGFCQGNRFQEAVSLV-DSMDGFGFVPNVVIYNTVINGLCKNRDL 200
Query: 218 VNEVEV-------------------------------AVRVLDEMLGMGLVPNVVSYTTV 246
N +EV A R+L +M+ + PNV+ +T +
Sbjct: 201 NNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTAL 260
Query: 247 MGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
+ + G++ A + E++ + P+ TY L++GFC G L A + D M G
Sbjct: 261 IDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGC 320
Query: 307 QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE 366
P+ VTY +I +CK K+ + + L +M +G V + ++ C+ G + A +
Sbjct: 321 FPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQK 380
Query: 367 VWRVLRKICGS--DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGL 423
V+ + CG D + L+ LC GK+ +A + E+ + + ++TYN +I GL
Sbjct: 381 VFNRMVD-CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 439
Query: 424 CERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNK 483
C +L EA L+ + KG P+A Y +I+G C+ G +E ++ M E+G +P++
Sbjct: 440 CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Query: 484 STY 486
Y
Sbjct: 500 RIY 502
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/286 (29%), Positives = 148/286 (51%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++V +L + K+N+ ++ + + +M +G+ ++ S+T ++ + + A+ +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG+++ G+ P T L++GFC+ R A+ ++D M+ G PN V Y +I CK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
+ A+ + M +KG + ++ L G A + R + K N +
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 383 ST-LIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMV 440
T LI K+G +LEARN+++E SV ++ TYN+LI G C G L +A ++D MV
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
KG P+ TYN LI GFCK ++G+++ EM G + + TY
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTY 362
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 153/289 (52%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+S ++ S IL+ C+ + + +A+ +L +M+ +G P++V+ +++ G+ A
Sbjct: 109 GISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEA 168
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ ++ + G+ P+ Y +++G C+ L A++V ME+ G++ + VTY +I
Sbjct: 169 VSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISG 228
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSD 378
+ +A LL DMV++ P+ ++D +EGN+ A +++ ++R+ +
Sbjct: 229 LSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPN 288
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
++LI+ C G + +A+ +F+ G ++TYNTLI G C+ + + +L+
Sbjct: 289 VFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFC 348
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M +G +AFTYN LI+G+C+ G ++ M + G P+ TY
Sbjct: 349 EMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 165/311 (53%), Gaps = 6/311 (1%)
Query: 181 QNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNV 240
Q+ + LA S F + G P++V+ L+ C N +E A+ ++++M+ MG+ P+V
Sbjct: 119 QSSQPYLASS-FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDV 177
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD 300
V YTT++ G ++ A+ + ++ + G PD YT LV+G C GR A ++
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRG 237
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
M + ++P+ +T+ +I+A+ K K +A L +M+R P+ +++ C EG
Sbjct: 238 MTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGC 297
Query: 361 VERACEVWRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNT 418
V+ A +++ ++ K C D ++LI+ CK KV +A +F E + G + +TY T
Sbjct: 298 VDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTT 357
Query: 419 LIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE-- 476
LI G + G+ A ++ MV +G PN TYN+L++ C G K+ + I E+M +
Sbjct: 358 LIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKRE 417
Query: 477 -NGCLPNKSTY 486
+G PN TY
Sbjct: 418 MDGVAPNIWTY 428
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 151/289 (52%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GVS ++ +CN+L+ C+ ++ +A L +M+ +G P++V++T+++ G+ M+ A
Sbjct: 102 GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEA 161
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
M ++ ++++ G PD YT ++D C+ G + A+ + D ME G++P+ V Y ++
Sbjct: 162 MSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNG 221
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
C + +A +LL M ++ P ++D +EG A E++ + ++ + N
Sbjct: 222 LCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPN 281
Query: 380 TVAST-LIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWD 437
T LI+ C +G V EAR +F E G ++ Y +LI G C+ ++ +A +++
Sbjct: 282 IFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFY 341
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M +KG N TY LI GF +VG + M G PN TY
Sbjct: 342 EMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTY 390
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 173/337 (51%), Gaps = 7/337 (2%)
Query: 147 GKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVV 206
G + AL F ++E+ GIRP V + R R A S+ + T+ + P+V+
Sbjct: 191 GHVNYALSLFDQMEN-YGIRPDVVMYTSLVNGLCNSGRWRDADSLLR-GMTKRKIKPDVI 248
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+ N L+ A K + A + +EM+ M + PN+ +YT+++ G+ G +D A ++ +
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
KG PD YT L++GFC+ ++ A+K+ +M + G+ N +TY +I+ + + KP
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKP 368
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL--RKICGSDNTV--A 382
A + MV +G P+ ++ LC G V++A ++ + R++ G +
Sbjct: 369 NVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTY 428
Query: 383 STLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+ L+H LC GK+ +A VFE+ + ++TY +I G+C+ G++ A L+ +
Sbjct: 429 NVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPS 488
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
KG PN TY +I+G + G E + +M E+G
Sbjct: 489 KGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDG 525
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 145/287 (50%), Gaps = 4/287 (1%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+++ LL + K+ + +V + + D + MG+ ++ + +M + A
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSF 129
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG+++ G+ PD T+T L++GFC R+ A+ +++ M E G++P+ V Y +I++ CK
Sbjct: 130 LGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCK 189
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL--RKICGSDNT 380
A++L + M G P + +V+ LC G A + R + RKI D
Sbjct: 190 NGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKI-KPDVI 248
Query: 381 VASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDM 439
+ LI K+GK L+A ++ E S+A ++ TY +LI G C G + EA +++ M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 440 VEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
KG P+ Y LINGFCK + ++I EM + G N TY
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 122/252 (48%), Gaps = 2/252 (0%)
Query: 237 VPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIK 296
+P+++ +T ++ A D + + + G + D T +L++ FC+ + A
Sbjct: 69 LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASS 128
Query: 297 VMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC 356
+ M + G +P+ VT+ +I +C + EA++++ MV G P + ++D LC
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 357 EEGNVERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLL 414
+ G+V A ++ + D + ++L++ LC G+ +A ++ + ++
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVI 248
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
T+N LI + G+ +A L+++M+ APN FTY LINGFC G E ++ M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 475 CENGCLPNKSTY 486
GC P+ Y
Sbjct: 309 ETKGCFPDVVAY 320
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 89/171 (52%), Gaps = 3/171 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I+G+G GKP+ A F + SR G+ P++R N + + A +F++ +
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSR-GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQK 415
Query: 198 R--FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
R GV+PN+ + N+LL LC ++E A+ V ++M + +++YT ++ G G
Sbjct: 416 REMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGK 475
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
+ A+ + + KG P+ TYT ++ G R+G A + M+E+GV
Sbjct: 476 VKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 96/289 (33%), Positives = 149/289 (51%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ +V N L+ CK ++ A + EM+ L P VV+YT++MGGY +G ++ A
Sbjct: 432 GLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA 491
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+R+ E+ KG AP T+T L+ G R G + A+K+ ++M E V+PN VTY VMIE
Sbjct: 492 LRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEG 551
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-ICGSD 378
YC+ +A L++M KG VP + ++ LC G A L K C +
Sbjct: 552 YCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELN 611
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ L+H C++GK+ EA +V +E + G L+ Y LI G + + L
Sbjct: 612 EICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLK 671
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M ++G P+ Y +I+ K G+ KE I + M GC+PN+ TY
Sbjct: 672 EMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 160/294 (54%), Gaps = 14/294 (4%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ P+VV+ L+ LCKV E E+ + ++DEML + P+ + ++++ G RG ++ A+
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
++ V+D G +P+ Y L+D C+ + A + D M + G++PN+VTY ++I+ +
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 321 CKWKKPGEAVNLLEDMVRKGH----VPSSGLC---CKVVDVLCEEGNVERACEVWRVLRK 373
C+ K A++ L +MV G P + L CK D+ EG + ++ K
Sbjct: 413 CRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMA------EMINK 466
Query: 374 ICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEA 432
++L+ C KGK+ +A ++ E G +A S+ T+ TL++GL G + +A
Sbjct: 467 KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 433 ARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+L+++M E PN TYN++I G+C+ G+ + L+EM E G +P+ +Y
Sbjct: 527 VKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 135/289 (46%), Gaps = 35/289 (12%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
FGVSPN+ N L+ +LCK + A + D M +GL PN V+Y+ ++ + RG +D
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+ LGE++D G Y L++G C+ G + AA M +M ++P VTY ++
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
YC K +A+ L +M KG PS
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSI--------------------------------- 507
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWD 437
+TL+ L + G + +A +F E +V + +TYN +I G CE G++ +A
Sbjct: 508 -YTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M EKG P+ ++Y LI+G C G A E ++ + + C N+ Y
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICY 615
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 173/416 (41%), Gaps = 74/416 (17%)
Query: 142 GYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGV 201
GY GK + ALR + + + GI PS+ + R A +F N + V
Sbjct: 481 GYCSKGKINKALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVKLF-NEMAEWNV 538
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVP----------------------- 238
PN V+ N++++ C+ ++ A L EM G+VP
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 239 ------------NVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFC 286
N + YT ++ G+ G ++ A+ V E++ +G D Y VL+DG
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSL 658
Query: 287 RQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSG 346
+ ++ +M + G++P++V Y MI+A K EA + + M+ +G VP+
Sbjct: 659 KHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEV 718
Query: 347 LCCKVVDVLCEEG------------------------------------NVERACEVWRV 370
V++ LC+ G ++++A E+
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNA 778
Query: 371 LRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGEL 429
+ K ++ + LI C++G++ EA + G V+ +TY T+I LC R ++
Sbjct: 779 ILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDV 838
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+A LW+ M EKG P+ YN LI+G C G + + EM G +PN T
Sbjct: 839 KKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 143/298 (47%), Gaps = 2/298 (0%)
Query: 191 VFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY 250
VFK T+ + P V + + LL L K +A+ + ++M+ +G+ P+V YT V+
Sbjct: 178 VFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSL 237
Query: 251 AWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
D+ A ++ + G + Y VL+DG C++ ++ A+ + D+ ++P+
Sbjct: 238 CELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDV 297
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWR 369
VTY ++ CK ++ + ++++M+ PS +V+ L + G +E A V R
Sbjct: 298 VTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKR 357
Query: 370 VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGE 428
V+ + V + LI LCK K EA +F+ + G + +TY+ LI C RG+
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L A +MV+ G + + YN LING CK G+ + EM P TY
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTY 475
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 112/260 (43%), Gaps = 37/260 (14%)
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQP------- 308
+DG + + P+ T + L+ G + A+++ +DM G++P
Sbjct: 173 LDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTG 232
Query: 309 ----------------------------NEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKG 340
N V Y V+I+ CK +K EAV + +D+ K
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD 292
Query: 341 HVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEAR 399
P C +V LC+ E E+ + + S + A S+L+ L K+GK+ EA
Sbjct: 293 LKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEAL 352
Query: 400 NVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
N+ + + G +L YN LI LC+ + EA L+D M + G PN TY++LI+ F
Sbjct: 353 NLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 459 CKVGNAKEGIRILEEMCENG 478
C+ G + L EM + G
Sbjct: 413 CRRGKLDTALSFLGEMVDTG 432
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 174/353 (49%), Gaps = 4/353 (1%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNS 195
+ + GY + + A+ F +I +G +P+V +N+ A +F
Sbjct: 156 FTSLLNGYCHWNRIEDAIALFDQILG-MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM 214
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
T G PNVV+ N L+ LC++ A +L +M+ + PNV+++T ++ + G
Sbjct: 215 GTN-GSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGK 273
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
+ A + ++ PD TY L++G C G L A ++ ME NG PNEV Y
Sbjct: 274 LMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTT 333
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KI 374
+I +CK K+ + + + +M +KG V ++ ++ C G + A EV+ + +
Sbjct: 334 LIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRR 393
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAA 433
D + L+ LC GKV +A +FE + +++TY +I G+C+ G++ +A
Sbjct: 394 APPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAF 453
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L+ + KG PN TY +I+GFC+ G E + ++M E+G LPN+S Y
Sbjct: 454 DLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 163/322 (50%), Gaps = 3/322 (0%)
Query: 167 PSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVR 226
PS+ + R+ + S+F+ + G+ P + +CNI++ +C ++ A
Sbjct: 81 PSIIDFTRLLSVIAKMNRYDVVISLFEQMQI-LGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 227 VLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFC 286
L +M+ +G P++V++T+++ GY ++ A+ + ++L G+ P+ TYT L+ C
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 287 RQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSG 346
+ L A+++ + M NG +PN VTY ++ C+ + G+A LL DM+++ P+
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 347 LCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEF 405
++D + G + A E++ V+ ++ D +LI+ LC G + EAR +F
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 406 E-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNA 464
E G + + Y TLI G C+ + + +++ +M +KG N TY +LI G+C VG
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 465 KEGIRILEEMCENGCLPNKSTY 486
+ +M P+ TY
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTY 401
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 118/252 (46%), Gaps = 2/252 (0%)
Query: 237 VPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIK 296
+P+++ +T ++ A D + + ++ G P T +++ C + A
Sbjct: 80 LPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASC 139
Query: 297 VMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC 356
+ M + G +P+ VT+ ++ YC W + +A+ L + ++ G P+ ++ LC
Sbjct: 140 FLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLC 199
Query: 357 EEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLL 414
+ ++ A E++ + N V + L+ LC+ G+ +A + + + +++
Sbjct: 200 KNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVI 259
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
T+ LI + G+L EA L++ M++ P+ FTY LING C G E ++ M
Sbjct: 260 TFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLM 319
Query: 475 CENGCLPNKSTY 486
NGC PN+ Y
Sbjct: 320 ERNGCYPNEVIY 331
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 164/321 (51%), Gaps = 5/321 (1%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P V+ N L A+ K + E+ + + +M G+ ++ + + ++ + + A
Sbjct: 86 PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFST 145
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+G+++ G+ PD + L++G C + R+ A++++D M E G +P +T ++ C
Sbjct: 146 MGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL--RKICGSDNT 380
K +AV L++ MV G P+ V++V+C+ G A E+ R + R I D
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI-KLDAV 264
Query: 381 VASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDM 439
S +I LCK G + A N+F E E G A ++TYNTLI G C G + A+L DM
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 440 VEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXM 499
+++ +PN T+++LI+ F K G +E ++L+EM + G PN TY +
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 500 NQEINKVVALAMSTGVDGELW 520
+ I ++V L +S G D ++
Sbjct: 385 EEAI-QMVDLMISKGCDPDIM 404
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 148/274 (54%), Gaps = 2/274 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G PN V+ +L +CK + +A+ +L +M + + V Y+ ++ G G +D A
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNA 282
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ E+ KG+ D TY L+ GFC GR K++ DM + + PN VT+ V+I++
Sbjct: 283 FNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDS 342
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSD 378
+ K K EA LL++M+++G P++ ++D C+E +E A + V ++ K C D
Sbjct: 343 FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPD 402
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ LI+ CK ++ + +F E G +A+ +TYNTL+ G C+ G+L A +L+
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRIL 471
+MV + P+ +Y +L++G C G ++ + I
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIF 496
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 149/291 (51%), Gaps = 2/291 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P+ V N LL LC V A+ ++D M+ MG P +++ T++ G G +
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ +++ G+ P+ TY +++ C+ G+ A++++ MEE ++ + V Y ++I
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
+ CK A NL +M KG ++ C G + ++ R + K S
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 378 DNTVA-STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARL 435
N V S LI K+GK+ EA + +E + G + +TYN+LI G C+ L EA ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
D M+ KG P+ T+N+LING+CK +G+ + EM G + N TY
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTY 441
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 155/287 (54%), Gaps = 2/287 (0%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+SPNVV+ ++L+ + K ++ A ++L EM+ G+ PN ++Y +++ G+ ++ A+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+++ ++ KG PD T+ +L++G+C+ R+ +++ +M GV N VTY +++ +
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDN 379
C+ K A L ++MV + P ++D LC+ G +E+A E++ ++ + D
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+ +IH +C KV +A ++F G YN +I+ LC + L +A L+
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
M E+G AP+ TYN+LI +A ++EEM +G + ST
Sbjct: 569 MTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVST 615
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 186/390 (47%), Gaps = 43/390 (11%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNS 195
L T + G L GK A+ R+ G +P+ ++ + LA + +
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRM-VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
R + + V +I++ LCK ++ A + +EM G ++++Y T++GG+ G
Sbjct: 255 EER-NIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
D ++L +++ + +P+ T++VL+D F ++G+L A +++ +M + G+ PN +TY
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNS 373
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRK 373
+I+ +CK + EA+ +++ M+ KG P +++ C+ ++ E++R LR
Sbjct: 374 LIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRG 433
Query: 374 ICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGEL-- 429
+ NTV +TL+ C+ GK+ A+ +F+E V +++Y L+ GLC+ GEL
Sbjct: 434 VIA--NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491
Query: 430 ---------------------------CEAARL---WDDMVE---KGRAPNAFTYNLLIN 456
C A+++ WD KG +A YN++I+
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551
Query: 457 GFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
C+ + + + +M E G P++ TY
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 113/258 (43%), Gaps = 35/258 (13%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P++++ NIL+ CK N ++ + + EM G++ N V+Y T++ G+ G ++ A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ E++ + PD +Y +L+DG C G L A+++ +E++ ++ + Y ++I
Sbjct: 458 KKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHG 517
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
C K +A +L + KG D
Sbjct: 518 MCNASKVDDAWDLFCSLPLKG----------------------------------VKLDA 543
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+ +I LC+K + +A +F + E G LTYN LI + AA L ++
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Query: 439 MVEKGRAPNAFTYNLLIN 456
M G + T ++IN
Sbjct: 604 MKSSGFPADVSTVKMVIN 621
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 162/291 (55%), Gaps = 4/291 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G S ++V+ IL+ A CK +++ A+ L EM MGL ++V YT+++ G+ G++D
Sbjct: 207 GCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRG 266
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ EVL++G +P A TY L+ GFC+ G+L A ++ + M E GV+PN TY +I+
Sbjct: 267 KALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDG 326
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-ICGSD 378
C K EA+ LL M+ K P++ +++ LC++G V A E+ +++K D
Sbjct: 327 LCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPD 386
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVAS---LLTYNTLIAGLCERGELCEAARL 435
N + L+ LC KG + EA + S + +++YN LI GLC+ L +A +
Sbjct: 387 NITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDI 446
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+D +VEK A + T N+L+N K G+ + + + +++ ++ + N TY
Sbjct: 447 YDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY 497
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 156/309 (50%), Gaps = 3/309 (0%)
Query: 180 VQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPN 239
V+++ H LA S ++ N VS + LL+ ++ + A VL ML G N
Sbjct: 83 VRSRNHELAFSFYR-KMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFN 141
Query: 240 VVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMD 299
V ++ ++ G + A+ +L E+ PD +Y ++ GFC L A+++ +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 300 DMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEG 359
+M+ +G + VT+G++I+A+CK K EA+ L++M G + ++ C+ G
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCG 261
Query: 360 NVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFE-EFEGGSVASLLTYN 417
++R ++ VL + +TLI CK G++ EA +FE E G ++ TY
Sbjct: 262 ELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYT 321
Query: 418 TLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCEN 477
LI GLC G+ EA +L + M+EK PNA TYN++IN CK G + + I+E M +
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 478 GCLPNKSTY 486
P+ TY
Sbjct: 382 RTRPDNITY 390
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 141/280 (50%), Gaps = 2/280 (0%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
N L+ L + E+A +ML N VS + ++ Y A VL +L
Sbjct: 76 NNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLK 135
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
+G+A + + +L+ G CR A+ ++ +M N + P+ +Y +I +C+ K+ +
Sbjct: 136 RGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEK 195
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIH 387
A+ L +M G S ++D C+ G ++ A + ++ + +D V ++LI
Sbjct: 196 ALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIR 255
Query: 388 WLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
C G++ + +F+E E G +TYNTLI G C+ G+L EA+ +++ M+E+G P
Sbjct: 256 GFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRP 315
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
N +TY LI+G C VG KE +++L M E PN TY
Sbjct: 316 NVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 148/293 (50%), Gaps = 5/293 (1%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A S+ + R R + P+V S N +++ C+ E+E A+ + +EM G G ++V++ ++
Sbjct: 161 AVSLLREMR-RNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
+ G MD AM L E+ G D YT L+ GFC G L + D++ E G
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS 279
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P +TY +I +CK + EA + E M+ +G P+ ++D LC G + A ++
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 368 WRVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCE 425
++ + N V + +I+ LCK G V +A + E + +TYN L+ GLC
Sbjct: 340 LNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA 399
Query: 426 RGELCEAARLWDDMVEKGR--APNAFTYNLLINGFCKVGNAKEGIRILEEMCE 476
+G+L EA++L M++ P+ +YN LI+G CK + + I + + E
Sbjct: 400 KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 177/387 (45%), Gaps = 43/387 (11%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I + AGK D A+ FL+ +G+ + ++F R
Sbjct: 219 IDAFCKAGKMDEAM-GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER- 276
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G SP ++ N L++ CK+ +++ A + + M+ G+ PNV +YT ++ G G A
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+++L +++K P+A TY ++++ C+ G + A+++++ M++ +P+ +TY +++
Sbjct: 337 LQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGG 396
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPS----------SGLC--------CKVVDVLCEE--- 358
C EA LL M++ GLC + D+L E+
Sbjct: 397 LCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGA 456
Query: 359 ----------------GNVERACEVWRVLR--KICGSDNTVASTLIHWLCKKGKVLEARN 400
G+V +A E+W+ + KI + +T + +I CK G + A+
Sbjct: 457 GDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTY-TAMIDGFCKTGMLNVAKG 515
Query: 401 VFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFC 459
+ + + S+ YN L++ LC+ G L +A RL+++M P+ ++N++I+G
Sbjct: 516 LLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSL 575
Query: 460 KVGNAKEGIRILEEMCENGCLPNKSTY 486
K G+ K +L M G P+ TY
Sbjct: 576 KAGDIKSAESLLVGMSRAGLSPDLFTY 602
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 146/353 (41%), Gaps = 47/353 (13%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T IRG+ G+ A F + R G+RP+V + + A + N
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIER-GVRPNVYTYTGLIDGLCGVGKTKEALQLL-NLMI 344
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
PN V+ NI++ LCK V AV +++ M P+ ++Y ++GG +GD+D
Sbjct: 345 EKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLD 404
Query: 258 GAMRVLGEVL-DKGWA-PDATTYTVLVDGFCRQGRLVAAIKVMD---------------- 299
A ++L +L D + PD +Y L+ G C++ RL A+ + D
Sbjct: 405 EASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNI 464
Query: 300 -------------------DMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKG 340
+ ++ + N TY MI+ +CK A LL M
Sbjct: 465 LLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSE 524
Query: 341 HVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN----TVASTLIHWLCKKGKVL 396
PS ++ LC+EG++++A WR+ ++ +N + +I K G +
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQA---WRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIK 581
Query: 397 EARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
A ++ G L TY+ LI + G L EA +D MV+ G P+A
Sbjct: 582 SAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDA 634
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 1/171 (0%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ P+V N LL +LCK ++ A R+ +EM P+VVS+ ++ G GD+ A
Sbjct: 525 LQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAE 584
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+L + G +PD TY+ L++ F + G L AI D M ++G +P+ +++
Sbjct: 585 SLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYC 644
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC-EEGNVERACEVWRV 370
+ + L++ +V K V L C V+D +C N++ A + RV
Sbjct: 645 ISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRV 695
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 1/181 (0%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
++ CK + VA +L +M L P+V Y ++ G +D A R+ E+
Sbjct: 500 MIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDN 559
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
PD ++ +++DG + G + +A ++ M G+ P+ TY +I + K EA+
Sbjct: 560 NFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAI 619
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHWL 389
+ + MV G P + +C V+ +G ++ E V +++ K D + T++ ++
Sbjct: 620 SFFDKMVDSGFEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYM 679
Query: 390 C 390
C
Sbjct: 680 C 680
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 170/339 (50%), Gaps = 4/339 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I G L G+ AL R+ +G +P + + + A + +
Sbjct: 163 TLINGLCLEGRVSEALELVDRM-VEMGHKPDLITINTLVNGLCLSGKEAEAM-LLIDKMV 220
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+G PN V+ +L +CK + +A+ +L +M + + V Y+ ++ G G +D
Sbjct: 221 EYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLD 280
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A + E+ KG + TY +L+ GFC GR K++ DM + + PN VT+ V+I
Sbjct: 281 NAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICG 376
+++ K K EA L ++M+ +G P + ++D C+E ++++A ++ ++ K C
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARL 435
+ + LI+ CK ++ + +F + G VA +TYNTLI G CE G+L A L
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+ +MV + PN TY +L++G C G +++ + I E++
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKI 499
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 162/288 (56%), Gaps = 4/288 (1%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
++PNVV+ ++L+ + K ++ A + EM+ G+ P+ ++YT+++ G+ +D A
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKAN 388
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+++ ++ KG P+ T+ +L++G+C+ R+ +++ M GV + VTY +I+ +
Sbjct: 389 QMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGF 448
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKV-VDVLCEEGNVERACEVWRVLRKICGS-D 378
C+ K A L ++MV + VP + + K+ +D LC+ G E+A E++ + K D
Sbjct: 449 CELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ + +IH +C KV +A ++F G + TYN +I GLC++G L EA L+
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFR 567
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
M E G AP+ +TYN+LI G+A + ++++EE+ G + ST
Sbjct: 568 KMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDAST 615
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 162/316 (51%), Gaps = 3/316 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P V+ + L A+ K + ++ + + +M G+ N+ + + ++ + + A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+G+++ G+ P+ T++ L++G C +GR+ A++++D M E G +P+ +T ++ C
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSDNTV 381
K EA+ L++ MV G P++ V++V+C+ G A E+ R + + D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMV 440
S +I LCK G + A N+F E E G +++TYN LI G C G + A+L DM+
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXMN 500
++ PN T+++LI+ F K G +E + +EM G P+ TY ++
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 501 QEINKVVALAMSTGVD 516
+ N++V L +S G D
Sbjct: 386 KA-NQMVDLMVSKGCD 400
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 155/303 (51%), Gaps = 7/303 (2%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A ++F + G++ N+++ NIL+ C + ++L +M+ + PNVV+++ ++
Sbjct: 282 AFNLFNEMEMK-GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLI 340
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
+ G + A + E++ +G APD TYT L+DGFC++ L A +++D M G
Sbjct: 341 DSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCD 400
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
PN T+ ++I YCK + + + L M +G V + ++ CE G + A E+
Sbjct: 401 PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 368 WR--VLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGL 423
++ V RK+ N V L+ LC G+ +A +FE+ E + + YN +I G+
Sbjct: 461 FQEMVSRKV--PPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518
Query: 424 CERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNK 483
C ++ +A L+ + KG P TYN++I G CK G E + +M E+G P+
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578
Query: 484 STY 486
TY
Sbjct: 579 WTY 581
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 130/318 (40%), Gaps = 31/318 (9%)
Query: 60 KLLASLISRQHDPH------LSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEME 113
KLL +I R+ +P+ L + + H + +R I P+
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA---------PDTI 369
Query: 114 SLLSTLPRHSPQQFLDHC----------GEDPLVTA----IRGYGLAGKPDSALRTFLRI 159
+ S + + LD G DP + I GY A + D L F ++
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKM 429
Query: 160 ESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVN 219
R G+ + + +A +F+ +R V PN+V+ ILL LC
Sbjct: 430 SLR-GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGLCDNG 487
Query: 220 EVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYT 279
E E A+ + +++ + ++ Y ++ G +D A + + KG P TY
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 280 VLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRK 339
+++ G C++G L A + MEE+G P+ TY ++I A+ ++V L+E++ R
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 607
Query: 340 GHVPSSGLCCKVVDVLCE 357
G + V+D+L +
Sbjct: 608 GFSVDASTIKMVIDMLSD 625
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 154/291 (52%), Gaps = 2/291 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R + + + NIL+ C+ +++ +A+ +L +M+ +G P++V+ ++++ GY +
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ ++++ G+ PD T+T L+ G + A+ ++D M + G QPN VTYGV++
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
CK A+NLL M + ++D LC+ +V+ A +++ +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 378 DNTVA-STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARL 435
N V S+LI LC G+ +A + + E +L+T+N LI + G+ EA +L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+DDM+++ P+ FTYN L+NGFC + ++ E M C P+ TY
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTY 403
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 154/291 (52%), Gaps = 2/291 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P++V+ + LL C + AV ++D+M+ MG P+ +++TT++ G
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ ++ +G P+ TY V+V+G C++G A+ +++ ME ++ + V + +I
Sbjct: 208 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTII 267
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICG 376
++ CK++ +A+NL ++M KG P+ ++ LC G A ++ ++ K
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARL 435
+ + LI K+GK +EA ++++ S+ + TYN+L+ G C L +A ++
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ MV K P+ TYN LI GFCK ++G + EM G + + TY
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 158/286 (55%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++V N LL A+ K+ + +V + + ++M + +V + +Y ++ + R + A+ +
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG+++ G+ P T + L++G+C R+ A+ ++D M E G +P+ +T+ +I
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTV 381
K EAV L++ MV++G P+ VV+ LC+ G+ + A + + +D +
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMV 440
+T+I LCK V +A N+F+E E + +++TY++LI+ LC G +A++L DM+
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
EK PN T+N LI+ F K G E ++ ++M + P+ TY
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTY 368
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 155/301 (51%), Gaps = 3/301 (0%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A ++FK T+ G+ PNVV+ + L+ LC A ++L +M+ + PN+V++ ++
Sbjct: 279 ALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 337
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
+ G A ++ +++ + PD TY LV+GFC RL A ++ + M
Sbjct: 338 DAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF 397
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P+ VTY +I+ +CK K+ + L +M +G V + ++ L +G+ + A +V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 368 WR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCE 425
++ ++ D S L+ LC GK+ +A VF+ + + + Y T+I G+C+
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
G++ + L+ + KG PN TYN +I+G C +E +L++M E+G LPN T
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGT 577
Query: 486 Y 486
Y
Sbjct: 578 Y 578
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 159/327 (48%), Gaps = 4/327 (1%)
Query: 150 DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCN 209
D AL F +E++ GIRP+V R A + + + ++PN+V+ N
Sbjct: 277 DDALNLFKEMETK-GIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-KINPNLVTFN 334
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
L+ A K + A ++ D+M+ + P++ +Y +++ G+ +D A ++ ++ K
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
PD TY L+ GFC+ R+ ++ +M G+ + VTY +I+ A
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHW 388
+ + MV G P ++D LC G +E+A EV+ ++K D + +T+I
Sbjct: 455 QKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEG 514
Query: 389 LCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
+CK GKV + ++F G +++TYNT+I+GLC + L EA L M E G PN
Sbjct: 515 MCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPN 574
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEM 474
+ TYN LI + G+ ++ EM
Sbjct: 575 SGTYNTLIRAHLRDGDKAASAELIREM 601
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 35/255 (13%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+VV+ N L+K CK VE + EM GLV + V+YTT++ G GD D A +V
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+++ G PD TY++L+DG C G+L A++V D M+++ ++ + Y MIE CK
Sbjct: 458 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 517
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K + +L + KG P NV
Sbjct: 518 AGKVDDGWDLFCSLSLKGVKP----------------NV------------------VTY 543
Query: 383 STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+T+I LC K + EA + ++ E G + + TYNTLI G+ +A L +M
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS 603
Query: 442 KGRAPNAFTYNLLIN 456
+A T L+ N
Sbjct: 604 CRFVGDASTIGLVAN 618
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 113/268 (42%), Gaps = 37/268 (13%)
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
+D A+ + G ++ P + L+ + + I + + M+ + TY +
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPS--------SGLC--------CKVVDVLCEEG 359
+I +C+ + A+ LL M++ G+ PS +G C +VD + E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 360 --------------------NVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEAR 399
E V R++++ C + +++ LCK+G A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 400 NVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
N+ + E + A ++ +NT+I LC+ + +A L+ +M KG PN TY+ LI+
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 459 CKVGNAKEGIRILEEMCENGCLPNKSTY 486
C G + ++L +M E PN T+
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTF 333
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 152 bits (383), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 157/321 (48%), Gaps = 36/321 (11%)
Query: 167 PSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVR 226
PS+ V+ K++ + S+ K G+ ++ + NI++ C +V +A+
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEV-LGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 227 VLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFC 286
+L +ML +G P+ V+ +++ G+ R + A+ ++ ++++ G+ PD Y ++D C
Sbjct: 142 ILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLC 201
Query: 287 RQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSG 346
+ R+ A ++E G++PN VTY ++ C + +A LL DM++K P
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITP--- 258
Query: 347 LCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE 406
NV S L+ K GKVLEA+ +FEE
Sbjct: 259 -------------NV------------------ITYSALLDAFVKNGKVLEAKELFEEMV 287
Query: 407 GGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
S+ ++TY++LI GLC + EA +++D MV KG + +YN LINGFCK +
Sbjct: 288 RMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 466 EGIRILEEMCENGCLPNKSTY 486
+G+++ EM + G + N TY
Sbjct: 348 DGMKLFREMSQRGLVSNTVTY 368
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 149/279 (53%), Gaps = 2/279 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P+ V+ L+ C+ N V AV ++D+M+ +G P++V+Y ++ ++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A E+ KG P+ TYT LV+G C R A +++ DM + + PN +TY ++
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICG 376
+A+ K K EA L E+MVR P +++ LC ++ A +++ ++ K C
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCL 327
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARL 435
+D +TLI+ CK +V + +F E + G V++ +TYNTLI G + G++ +A
Sbjct: 328 ADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+ M G +P+ +TYN+L+ G C G ++ + I E+M
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 156/307 (50%), Gaps = 3/307 (0%)
Query: 183 KRHRLAHSV-FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVV 241
+R+R++ +V + G P++V+ N ++ +LCK V A E+ G+ PNVV
Sbjct: 167 RRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVV 226
Query: 242 SYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
+YT ++ G A R+L +++ K P+ TY+ L+D F + G+++ A ++ ++M
Sbjct: 227 TYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM 286
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
+ P+ VTY +I C + EA + + MV KG + +++ C+ V
Sbjct: 287 VRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRV 346
Query: 362 ERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTL 419
E +++R + + NTV +TLI + G V +A+ F + + ++ + TYN L
Sbjct: 347 EDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
+ GLC+ GEL +A +++DM ++ + TY +I G CK G +E + + G
Sbjct: 407 LGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Query: 480 LPNKSTY 486
P+ TY
Sbjct: 467 KPDIVTY 473
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 159/325 (48%), Gaps = 3/325 (0%)
Query: 163 LGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVE 222
+G +P + + KR A FK R G+ PNVV+ L+ LC +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIE-RKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 223 VAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLV 282
A R+L +M+ + PNV++Y+ ++ + G + A + E++ PD TY+ L+
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLI 302
Query: 283 DGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHV 342
+G C R+ A ++ D M G + V+Y +I +CK K+ + + L +M ++G V
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 343 PSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-DNTVASTLIHWLCKKGKVLEARNV 401
++ ++ + G+V++A E + + S D + L+ LC G++ +A +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 402 FEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCK 460
FE+ + + ++TY T+I G+C+ G++ EA L+ + KG P+ TY +++G C
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482
Query: 461 VGNAKEGIRILEEMCENGCLPNKST 485
G E + +M + G + N T
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCT 507
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 147/290 (50%), Gaps = 4/290 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G P+V +CNI+LK L + A V + M+ G++P V+++ T++ GD++
Sbjct: 196 RKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLE 255
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
++ E+ + TY +L++GF + G++ A + DM +G ++ +I
Sbjct: 256 RVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLI 315
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
E YCK +A + ++M+ G P++ + LC+ G ++ A E +L +
Sbjct: 316 EGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE---LLSSMAAP 372
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLW 436
D +TL+H K GK +EA +F++ G + S++TYNTLI GLCE G L A RL
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++M + P+ TY L+ GF K GN + +EM G P+ Y
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/288 (31%), Positives = 148/288 (51%), Gaps = 3/288 (1%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
+P+VVS N L+ K+ + A + D++ + P++V+Y T++ G G+++GA R
Sbjct: 371 APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQR 430
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
+ E+ + PD TYT LV GF + G L A +V D+M G++P+ Y
Sbjct: 431 LKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGEL 490
Query: 322 KWKKPGEAVNLLEDMVRKG-HVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSDN 379
+ +A L E+MV H P + +D LC+ GN+ +A E R + R D+
Sbjct: 491 RLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDH 550
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDD 438
+T+I + G+ ARN+++E + S++TY LI G + G L +A + +
Sbjct: 551 VTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M ++G PN T+N L+ G CK GN E R L +M E G PNK +Y
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY 658
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 141/289 (48%), Gaps = 3/289 (1%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ P++V+ N L+ LC+ +E A R+ +EM + P+V++YTT++ G+ G++ A
Sbjct: 405 IHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMAT 464
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM-EENGVQPNEVTYGVMIEA 319
V E+L KG PD YT G R G A ++ ++M + P+ Y V I+
Sbjct: 465 EVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDG 524
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSD 378
CK +A+ + R G VP V+ E G + A ++ +LRK
Sbjct: 525 LCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPS 584
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWD 437
LI+ K G++ +A E + G +++T+N L+ G+C+ G + EA R
Sbjct: 585 VITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLC 644
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M E+G PN ++Y +LI+ C +E +++ +EM + P+ T+
Sbjct: 645 KMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTH 693
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 83/153 (54%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F+ R G+ P+ V+ +++ + + ++A + DEML L P+V++Y ++ G+A
Sbjct: 537 FQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHA 596
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
G ++ A + E+ +G P+ T+ L+ G C+ G + A + + MEE G+ PN+
Sbjct: 597 KAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKY 656
Query: 312 TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS 344
+Y ++I C ++K E V L ++M+ K P
Sbjct: 657 SYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 689
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 94/199 (47%), Gaps = 4/199 (2%)
Query: 122 HSPQQFLDHCGEDPLVTAIRGYGL--AGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXX 179
H DH D + +R GL G A+ F R R+G+ P
Sbjct: 502 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIE-FQRKIFRVGLVPDHVTYTTVIRGY 560
Query: 180 VQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPN 239
++N + ++A +++ + R + P+V++ +L+ K +E A + EM G+ PN
Sbjct: 561 LENGQFKMARNLY-DEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619
Query: 240 VVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMD 299
V+++ ++ G G++D A R L ++ ++G P+ +YT+L+ C + +K+
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679
Query: 300 DMEENGVQPNEVTYGVMIE 318
+M + ++P+ T+ + +
Sbjct: 680 EMLDKEIEPDGYTHRALFK 698
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/441 (25%), Positives = 196/441 (44%), Gaps = 29/441 (6%)
Query: 65 LISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHSP 124
L+ + DP L+ + F+ + T + H Y + L AR + + S+L +
Sbjct: 115 LVELKEDPKLAFKFFKWSMTRN-GFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKA 173
Query: 125 QQFLDHCGEDPLVTAIRGYGLA----------GKPDSALRTFLRIESRLGIRPSVRXXXX 174
+ + G+G+ G + A++ F +++ R + P R
Sbjct: 174 DCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMK-RFRVFPKTRS--- 229
Query: 175 XXXXXVQNKRHRLAHSVFKNSRTRF-------GVSPNVVSCNILLKALCKVNEVEVAVRV 227
HR A + RF G P V + NI++ +CK +VE A +
Sbjct: 230 -----CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGL 284
Query: 228 LDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCR 287
+EM GLVP+ V+Y +++ G+ G +D + E+ D PD TY L++ FC+
Sbjct: 285 FEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCK 344
Query: 288 QGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGL 347
G+L ++ +M+ NG++PN V+Y +++A+CK +A+ DM R G VP+
Sbjct: 345 FGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYT 404
Query: 348 CCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAST-LIHWLCKKGKVLEARNVFEEFE 406
++D C+ GN+ A + + ++ N V T LI LC ++ EA +F + +
Sbjct: 405 YTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD 464
Query: 407 -GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
G + +L +YN LI G + + A L +++ +G P+ Y I G C + +
Sbjct: 465 TAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIE 524
Query: 466 EGIRILEEMCENGCLPNKSTY 486
++ EM E G N Y
Sbjct: 525 AAKVVMNEMKECGIKANSLIY 545
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 144/293 (49%), Gaps = 3/293 (1%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
N + GV NVV+ L+ LC ++ A + +M G++PN+ SY ++ G+
Sbjct: 426 NEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKA 485
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
+MD A+ +L E+ +G PD Y + G C ++ AA VM++M+E G++ N + Y
Sbjct: 486 KNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
+++AY K P E ++LL++M + C ++D LC+ V +A + + +
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 374 ICG--SDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELC 430
G ++ + + +I LCK +V A +FE+ + G V Y +L+ G ++G +
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNK 483
EA L D M E G + Y L+ G ++ LEEM G P++
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDE 718
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 170/353 (48%), Gaps = 7/353 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
+ I G+G G+ D + F ++ + P V + + + ++ +
Sbjct: 302 SMIDGFGKVGRLDDTVCFFEEMKD-MCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG 360
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
G+ PNVVS + L+ A CK ++ A++ +M +GLVPN +YT+++ G++
Sbjct: 361 N-GLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLS 419
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A R+ E+L G + TYT L+DG C R+ A ++ M+ GV PN +Y +I
Sbjct: 420 DAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALI 479
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG- 376
+ K K A+ LL ++ +G P L + LC +E A V +++ CG
Sbjct: 480 HGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKE-CGI 538
Query: 377 -SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAAR 434
+++ + +TL+ K G E ++ +E + + +++T+ LI GLC+ + +A
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 435 LWDDMV-EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ + + G NA + +I+G CK + + E+M + G +P+++ Y
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAY 651
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLG-MGLVPNVVSYTTVMGGYAWRGDMDGA 259
+ VV+ +L+ LCK V AV + + GL N +T ++ G ++ A
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAA 632
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ +++ KG PD T YT L+DG +QG ++ A+ + D M E G++ + + Y ++
Sbjct: 633 TTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWG 692
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK--ICGS 377
+ +A + LE+M+ +G P LC V+ E G ++ A E+ L K + S
Sbjct: 693 LSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSYLMKHQLLTS 752
Query: 378 DNTVA 382
DN A
Sbjct: 753 DNDNA 757
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 84/187 (44%), Gaps = 8/187 (4%)
Query: 328 EAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN--TVAS-- 383
EA+ M R P + C ++ + G + +V R + + G+ TV +
Sbjct: 210 EAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD---DVKRFFKDMIGAGARPTVFTYN 266
Query: 384 TLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEK 442
+I +CK+G V AR +FEE + G V +TYN++I G + G L + +++M +
Sbjct: 267 IMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDM 326
Query: 443 GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXMNQE 502
P+ TYN LIN FCK G G+ EM NG PN +Y M Q
Sbjct: 327 CCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQA 386
Query: 503 INKVVAL 509
I V +
Sbjct: 387 IKFYVDM 393
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 79/174 (45%), Gaps = 1/174 (0%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T + Y +G P L ++ L I +V +NK A F
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMK-ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
FG+ N ++ LCK N+VE A + ++M+ GLVP+ +YT++M G +G++
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
A+ + ++ + G D YT LV G +L A +++M G+ P+EV
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEV 719
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/287 (29%), Positives = 154/287 (53%), Gaps = 3/287 (1%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++V + LL A+ K+N+ ++ + + ++M +G+ N+ +Y+ + + R + A+ +
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAI 132
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG+++ G+ P T L++GFC R+ A+ ++D M E G QP+ VT+ ++ +
Sbjct: 133 LGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQ 192
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-ICGSDNTV 381
K EAV L+E MV KG P V++ LC+ G + A + + K +D +
Sbjct: 193 HNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVI 252
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMV 440
+T+I LCK + +A ++F + E + + TYN LI+ LC G +A+RL DM+
Sbjct: 253 YNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDML 312
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG-CLPNKSTY 486
EK P+ +N LI+ F K G E ++ +EM ++ C P+ Y
Sbjct: 313 EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAY 359
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 157/292 (53%), Gaps = 5/292 (1%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G+S N+ + +I + C+ +++ +A+ +L +M+ +G P++V+ +++ G+ +
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+ ++ ++++ G+ PD T+T LV G + + A+ +++ M G QP+ VTYG +I
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCK-VVDVLCEEGNVERACEVWRVLR-KICG 376
CK +P A+NLL M KG + + + ++D LC+ +++ A +++ + K
Sbjct: 224 GLCKRGEPDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARL 435
D + LI LC G+ +A + + E L+ +N LI + G+L EA +L
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 436 WDDMVEKGRA-PNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+D+MV+ P+ YN LI GFCK +EG+ + EM + G + N TY
Sbjct: 343 YDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 394
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 146/292 (50%), Gaps = 3/292 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G P++V+ N LL C N + AV ++D+M+ MG P+ V++TT++ G
Sbjct: 138 KLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKAS 197
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ ++ KG PD TY +++G C++G A+ +++ ME+ ++ + V Y +I
Sbjct: 198 EAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTII 257
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICG 376
+ CK+K +A +L M KG P ++ LC G A + +L K
Sbjct: 258 DGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNIN 317
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGS--VASLLTYNTLIAGLCERGELCEAAR 434
D + LI K+GK++EA +++E ++ YNTLI G C+ + E
Sbjct: 318 PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME 377
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ +M ++G N TY LI+GF + + + ++M +G P+ TY
Sbjct: 378 VFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 165/350 (47%), Gaps = 5/350 (1%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I G G+PD AL ++E + I V + K A +F T+
Sbjct: 222 INGLCKRGEPDLALNLLNKME-KGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK- 279
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+V + N L+ LC A R+L +ML + P++V + ++ + G + A
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 260 MRVLGEVL-DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
++ E++ K PD Y L+ GFC+ R+ ++V +M + G+ N VTY +I
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-ICGS 377
+ + + A + + MV G P ++D LC GNVE A V+ ++K
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLW 436
D +T+I LCK GKV + ++F G +++TY T+++G C +G EA L+
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M E G PN+ TYN LI + G+ +++EM G + ST+
Sbjct: 520 VEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF 569
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 146/289 (50%), Gaps = 3/289 (1%)
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
R+ G S + N+ K L + +++ A+ + +M+ P++V ++ ++ A
Sbjct: 32 RSFAGASSDDCRENLSRKVLQDL-KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNK 90
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
D + + ++ + G + + TY++ ++ FCR+ +L A+ ++ M + G P+ VT
Sbjct: 91 FDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNS 150
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKI 374
++ +C + EAV L++ MV G+ P + +V L + A V R++ K
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAA 433
C D +I+ LCK+G+ A N+ + E G + A ++ YNT+I GLC+ + +A
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
L++ M KG P+ FTYN LI+ C G + R+L +M E P+
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPD 319
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/255 (30%), Positives = 117/255 (45%), Gaps = 35/255 (13%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+VV+ N L+K CK VE + V EM GLV N V+YTT++ G+ D D A V
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV 413
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+++ G PD TY +L+DG C G + A+ V + M++ ++ + VTY MIEA CK
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K + +L + KG P+
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNV----------------------------------VTY 499
Query: 383 STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+T++ C+KG EA +F E E G + + TYNTLI G+ +A L +M
Sbjct: 500 TTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRS 559
Query: 442 KGRAPNAFTYNLLIN 456
G A +A T+ L+ N
Sbjct: 560 CGFAGDASTFGLVTN 574
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 5/237 (2%)
Query: 130 HCGEDPLV--TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRL 187
HC D + T I+G+ + + + F + R G+ + Q +
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR-GLVGNTVTYTTLIHGFFQARDCDN 409
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A VFK + GV P++++ NILL LC VE A+ V + M + ++V+YTT++
Sbjct: 410 AQMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMI 468
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G ++ + + KG P+ TYT ++ GFCR+G A + +M+E+G
Sbjct: 469 EALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL 528
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
PN TY +I A + + L+++M G + V ++L +G ++++
Sbjct: 529 PNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKS 584
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 165/322 (51%), Gaps = 6/322 (1%)
Query: 167 PSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVR 226
PS+ ++K + L S+F + G+ ++ S NI++ LC+ + +A+
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVISLFHHMEV-CGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 227 VLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFC 286
V+ +M+ G P+VV+ ++++ G+ + A+ ++ ++ + G+ PD Y ++DG C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 287 RQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSG 346
+ G + A+++ D ME +GV+ + VTY ++ C + +A L+ DMV + VP+
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 347 LCCKVVDVLCEEGNVERACEVWRVLRKIC-GSDNTVASTLIHWLCKKGKVLEARNVFE-E 404
V+DV +EG A +++ + + C D ++LI+ LC G+V EA+ + +
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 405 FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNA 464
G + ++TYNTLI G C+ + E +L+ +M ++G + TYN +I G+ + G
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 465 KEGIRILEEMCENGCLPNKSTY 486
I M PN TY
Sbjct: 366 DAAQEIFSRMDSR---PNIRTY 384
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 193/436 (44%), Gaps = 20/436 (4%)
Query: 51 KPWPHRLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFP 110
+P P + + S I++ + L + +F H + H Y + L R F
Sbjct: 64 RPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVC--GIGHDLYSYNIVINCLCRCSRFV 121
Query: 111 EMESLLSTLPRHSPQQFLDHCGEDPLVTA----IRGYGLAGKPDSALRTFLRIESRLGIR 166
S++ + + G +P V I G+ + A+ ++E +G R
Sbjct: 122 IALSVVGKMMKF---------GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE-MGFR 171
Query: 167 PSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVR 226
P V + A +F + R GV + V+ N L+ LC A R
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELF-DRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 227 VLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFC 286
++ +M+ +VPNV+++T V+ + G AM++ E+ + PD TY L++G C
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 287 RQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSG 346
GR+ A +++D M G P+ VTY +I +CK K+ E L +M ++G V +
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 347 LCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE 406
++ + G + A E++ R + S L++ LC +V +A +FE +
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFS--RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQ 408
Query: 407 GGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
+ + TYN +I G+C+ G + +A L+ + KG P+ +Y +I+GFC+
Sbjct: 409 KSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWD 468
Query: 466 EGIRILEEMCENGCLP 481
+ + +M E+G LP
Sbjct: 469 KSDLLYRKMQEDGLLP 484
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 153/323 (47%), Gaps = 34/323 (10%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+FG P+VV+ + L+ C+ N V A+ ++ +M MG P+VV Y T++ G G ++
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ + + G DA TY LV G C GR A ++M DM + PN +T+ +I
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICG 376
+ + K K EA+ L E+M R+ P +++ LC G V+ A ++ ++ K C
Sbjct: 252 DVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCL 311
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGE------- 428
D +TLI+ CK +V E +F E + G V +TYNT+I G + G
Sbjct: 312 PDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEI 371
Query: 429 -------------------LC------EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGN 463
LC +A L+++M + + TYN++I+G CK+GN
Sbjct: 372 FSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGN 431
Query: 464 AKEGIRILEEMCENGCLPNKSTY 486
++ + + G P+ +Y
Sbjct: 432 VEDAWDLFRSLSCKGLKPDVVSY 454
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 133/287 (46%), Gaps = 37/287 (12%)
Query: 237 VPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIK 296
+P++V ++ V+ A + D + + + G D +Y ++++ CR R V A+
Sbjct: 66 LPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALS 125
Query: 297 VMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC 356
V+ M + G +P+ VT +I +C+ + +A++L+ M G P + ++D C
Sbjct: 126 VVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSC 185
Query: 357 EEGNVERACEVW-RVLRKICGSDNTVASTLIHWLC------------------------- 390
+ G V A E++ R+ R +D ++L+ LC
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 391 ----------KKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDM 439
K+GK EA ++EE V + TYN+LI GLC G + EA ++ D M
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 440 VEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
V KG P+ TYN LINGFCK EG ++ EM + G + + TY
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITY 352
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 181/346 (52%), Gaps = 12/346 (3%)
Query: 147 GKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVV 206
G+ + AL + ++E LG+ PSV ++ ++H A +F S G++ NV
Sbjct: 388 GEMEKALEFYKKMEV-LGLTPSVFHVHTIIQGWLKGQKHEEALKLFDES-FETGLA-NVF 444
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
CN +L LCK + + A +L +M G+ PNVVSY VM G+ + +MD A V +
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
L+KG P+ TY++L+DG R A++V++ M + ++ N V Y +I CK +
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCK-VVDVLCEEGNVERACEVWRVLRKICG---SDNTVA 382
+A LL +M+ + + S + ++D +EG ++ A + ++CG S N +
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAY---EEMCGNGISPNVIT 621
Query: 383 ST-LIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMV 440
T L++ LCK ++ +A + +E + V + Y LI G C+R + A+ L+ +++
Sbjct: 622 YTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELL 681
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
E+G P+ YN LI+GF +GN + + ++M ++G + TY
Sbjct: 682 EEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTY 727
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 177/378 (46%), Gaps = 40/378 (10%)
Query: 147 GKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPN-- 204
GK D A ++ESR GI P+V + K LA VF N + G+ PN
Sbjct: 457 GKTDEATELLSKMESR-GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEK-GLKPNNY 514
Query: 205 ------------------------VVSCNI---------LLKALCKVNEVEVAVRVLDEM 231
+ S NI ++ LCKV + A +L M
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 574
Query: 232 LGMG-LVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGR 290
+ L + +SY +++ G+ G+MD A+ E+ G +P+ TYT L++G C+ R
Sbjct: 575 IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Query: 291 LVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCK 350
+ A+++ D+M+ GV+ + YG +I+ +CK A L +++ +G PS +
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 351 VVDVLCEEGNVERACEVWR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-G 408
++ GN+ A ++++ +L+ D +TLI L K G ++ A ++ E + G
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVG 754
Query: 409 SVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGI 468
V + Y ++ GL ++G+ + +++++M + PN YN +I G + GN E
Sbjct: 755 LVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAF 814
Query: 469 RILEEMCENGCLPNKSTY 486
R+ +EM + G LP+ +T+
Sbjct: 815 RLHDEMLDKGILPDGATF 832
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 147/263 (55%), Gaps = 7/263 (2%)
Query: 206 VSC---NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
VSC N ++ K E++ AV +EM G G+ PNV++YT++M G MD A+ +
Sbjct: 582 VSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM 641
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
E+ +KG D Y L+DGFC++ + +A + ++ E G+ P++ Y +I +
Sbjct: 642 RDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRN 701
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTV 381
A++L + M++ G G ++D L ++GN+ A E++ ++ + D +
Sbjct: 702 LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEII 761
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMV 440
+ +++ L KKG+ ++ +FEE + +V ++L YN +IAG G L EA RL D+M+
Sbjct: 762 YTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEML 821
Query: 441 EKGRAPNAFTYNLLINGFCKVGN 463
+KG P+ T+++L++G +VGN
Sbjct: 822 DKGILPDGATFDILVSG--QVGN 842
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 170/377 (45%), Gaps = 40/377 (10%)
Query: 148 KPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVS 207
KP AL R R G P + +A+S+ + + + P+ +
Sbjct: 248 KPAEALEVLSRAIER-GAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQET 306
Query: 208 CNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL 267
++ A K ++ A+R+ DEML G+ NVV+ T+++ G+ D+ A+ + ++
Sbjct: 307 YTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME 366
Query: 268 DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG 327
+G +P++ T++VL++ F + G + A++ ME G+ P+ +I+ + K +K
Sbjct: 367 KEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHE 426
Query: 328 EAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLI 386
EA+ L ++ G + + +C ++ LC++G + A E+ + N V+ + ++
Sbjct: 427 EALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485
Query: 387 HWLCKKGKVLEARNVF--------------------------EEFEGGSVASLLT----- 415
C++ + AR VF +E V + +T
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545
Query: 416 -----YNTLIAGLCERGELCEAARLWDDMVEKGR-APNAFTYNLLINGFCKVGNAKEGIR 469
Y T+I GLC+ G+ +A L +M+E+ R + +YN +I+GF K G +
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVA 605
Query: 470 ILEEMCENGCLPNKSTY 486
EEMC NG PN TY
Sbjct: 606 AYEEMCGNGISPNVITY 622
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 133/288 (46%), Gaps = 3/288 (1%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
+S FG N + N LL A K + + AV ++++ML + ++P + R
Sbjct: 152 DSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQR 211
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
+ A + ++ G D T +L+ R+ + A++V+ E G +P+ + Y
Sbjct: 212 NSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLY 271
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGH-VPSSGLCCKVVDVLCEEGNVERACEVWRVLR 372
+ ++A CK A +LL +M K VPS V+ ++GN++ A + +
Sbjct: 272 SLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEML 331
Query: 373 KICGSDNTVAST-LIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELC 430
S N VA+T LI CK ++ A +F++ E G + +T++ LI + GE+
Sbjct: 332 SDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEME 391
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
+A + M G P+ F + +I G+ K +E +++ +E E G
Sbjct: 392 KALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG 439
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 2/227 (0%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
+ I G+ G+ DSA+ + + GI P+V +N R A + +
Sbjct: 589 SIIDGFFKEGEMDSAVAAYEEMCGN-GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKN 647
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ GV ++ + L+ CK + +E A + E+L GL P+ Y +++ G+ G+M
Sbjct: 648 K-GVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMV 706
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ + ++L G D TYT L+DG + G L+ A ++ +M+ G+ P+E+ Y V++
Sbjct: 707 AALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIV 766
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
K + + V + E+M + P+ + V+ EGN++ A
Sbjct: 767 NGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 122/260 (46%), Gaps = 3/260 (1%)
Query: 226 RVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGF 285
+++D G N ++ ++ Y+ D A+ ++ ++L+ P +
Sbjct: 149 KLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSAL 208
Query: 286 CRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSS 345
++ L A ++ M GV + VT +++ A + +KP EA+ +L + +G P S
Sbjct: 209 VQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDS 268
Query: 346 GLCCKVVDVLCEEGNVERACEVWRVLR--KICGSDNTVASTLIHWLCKKGKVLEARNVFE 403
L V C+ ++ A + R ++ K+C +++I K+G + +A + +
Sbjct: 269 LLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKD 328
Query: 404 E-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
E G +++ +LI G C+ +L A L+D M ++G +PN+ T+++LI F K G
Sbjct: 329 EMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNG 388
Query: 463 NAKEGIRILEEMCENGCLPN 482
++ + ++M G P+
Sbjct: 389 EMEKALEFYKKMEVLGLTPS 408
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+ + +++ L K + V++ +EM + PNV+ Y V+ G+ G++D A
Sbjct: 754 GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEA 813
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDG 284
R+ E+LDKG PD T+ +LV G
Sbjct: 814 FRLHDEMLDKGILPDGATFDILVSG 838
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 61/122 (50%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
L+ L K + +A + EM +GLVP+ + YT ++ G + +G +++ E+
Sbjct: 730 LIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNN 789
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
P+ Y ++ G R+G L A ++ D+M + G+ P+ T+ +++ +P A
Sbjct: 790 VTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAA 849
Query: 331 NL 332
+L
Sbjct: 850 SL 851
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 195/391 (49%), Gaps = 19/391 (4%)
Query: 59 PKLLASLISRQHDPHLSLQIFRHAQTH----HRASSHHPLPYRAIFLKLSRARCFPEMES 114
P + LI+ Q DP L+ +IF +A H SSH L LKL R R F ++
Sbjct: 51 PTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLIL-----ILKLGRGRYFNLIDD 105
Query: 115 LLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXX 174
+L+ +H + GE I+ Y A P+ L TF ++ P +
Sbjct: 106 VLA---KHRSSGY-PLTGE-IFTYLIKVYAEAKLPEKVLSTFYKM-LEFNFTPQPKHLNR 159
Query: 175 XXXXXVQNKRH-RLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLG 233
V ++ + + A +FK+SR GV PN S N+L++A C +++ +A ++ +ML
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLH-GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLE 218
Query: 234 MGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVA 293
+VP+V SY ++ G+ +G ++GAM +L ++L+KG+ PD +YT L++ CR+ +L
Sbjct: 219 RDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLRE 278
Query: 294 AIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVD 353
A K++ M+ G P+ V Y MI +C+ + +A +L+DM+ G P+S ++
Sbjct: 279 AYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIG 338
Query: 354 VLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFE-EFEGGSVA 411
LC++G + + + ++ K +V++ L+ C GKV EA +V E + G
Sbjct: 339 GLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 398
Query: 412 SLLTYNTLIAGLCERGELCEAARLWDDMVEK 442
T+ +I +C E + +D V++
Sbjct: 399 HSDTWEMVIPLICNEDESEKIKLFLEDAVKE 429
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 130/271 (47%), Gaps = 3/271 (1%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY-AWRGDMDGAMRVLGEVLDK 269
L+K + E + +ML P ++ + RG + A +
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLH 184
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G P+ +Y +L+ FC L A ++ M E V P+ +Y ++I+ +C+ + A
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGA 244
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIHW 388
+ LL+DM+ KG VP +++ LC + + A ++ R+ K C D +T+I
Sbjct: 245 MELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILG 304
Query: 389 LCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
C++ + ++AR V ++ G + ++Y TLI GLC++G E + ++M+ KG +P+
Sbjct: 305 FCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPH 364
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
N L+ GFC G +E ++E + +NG
Sbjct: 365 FSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 36/246 (14%)
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGF-CRQGRLVAAIKVMDDM 301
+T ++ YA + + ++L+ + P ++D +G L A ++
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
+GV PN +Y ++++A+C A L M+ + VP
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP------------------ 223
Query: 362 ERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLI 420
D LI C+KG+V A + ++ G V L+Y TL+
Sbjct: 224 ----------------DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLL 267
Query: 421 AGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL 480
LC + +L EA +L M KG P+ YN +I GFC+ A + ++L++M NGC
Sbjct: 268 NSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCS 327
Query: 481 PNKSTY 486
PN +Y
Sbjct: 328 PNSVSY 333
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 2/297 (0%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F + G P++V+ LL C+ + V A+ + D+M+GMG PNVV Y T++ G
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
+D A+ +L + G PD TY L+ G C GR A +++ M + + P+
Sbjct: 198 KSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVF 257
Query: 312 TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
T+ +I+A K + EA E+M+R+ P ++ LC ++ A E++ +
Sbjct: 258 TFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFM 317
Query: 372 -RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGEL 429
K C D S LI+ CK KV +F E + G V + +TY LI G C G+L
Sbjct: 318 VSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKL 377
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A ++ MV G PN TYN+L++G C G ++ + IL +M +NG + TY
Sbjct: 378 NVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTY 434
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 152/291 (52%), Gaps = 4/291 (1%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD-MD 257
G+ N+ +CNILL C+ +++ +A+ L +M+ +G P++V++ +++ G+ RGD +
Sbjct: 110 LGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFC-RGDRVY 168
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ + +++ G+ P+ Y ++DG C+ ++ A+ +++ ME++G+ P+ VTY +I
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICG 376
C + +A ++ M ++ P ++D +EG V A E + ++R+
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD 288
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARL 435
D S LI+ LC ++ EA +F G ++TY+ LI G C+ ++ +L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ +M ++G N TY +LI G+C+ G I M G PN TY
Sbjct: 349 FCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITY 399
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 160/334 (47%), Gaps = 3/334 (0%)
Query: 155 TFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKA 214
+FL +LG PS+ + R A +F + G PNVV N ++
Sbjct: 137 SFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF-DQMVGMGYKPNVVIYNTIIDG 195
Query: 215 LCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPD 274
LCK +V+ A+ +L+ M G+ P+VV+Y +++ G G A R++ + + PD
Sbjct: 196 LCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPD 255
Query: 275 ATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLE 334
T+ L+D ++GR+ A + ++M + P+ VTY ++I C + + EA +
Sbjct: 256 VFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFG 315
Query: 335 DMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAST-LIHWLCKKG 393
MV KG P +++ C+ VE +++ + + NTV T LI C+ G
Sbjct: 316 FMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAG 375
Query: 394 KVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYN 452
K+ A +F V +++TYN L+ GLC+ G++ +A + DM + G + TYN
Sbjct: 376 KLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYN 435
Query: 453 LLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++I G CK G + I + G +P+ TY
Sbjct: 436 IIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 146/286 (51%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++ + LL A+ K+ + +V + + ++M +G+ N+ + ++ + + A+
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG+++ G P T+ L++GFCR R+ A+ + D M G +PN V Y +I+ CK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSDNTV 381
K+ A++LL M + G P ++ LC G A + + ++ D
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMV 440
+ LI K+G+V EA +EE S+ ++TY+ LI GLC L EA ++ MV
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
KG P+ TY++LING+CK + G+++ EM + G + N TY
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTY 364
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 90/205 (43%), Gaps = 2/205 (0%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I G + + D A F + S+ G P V ++K+ +F R
Sbjct: 298 IYGLCMYSRLDEAEEMFGFMVSK-GCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR- 355
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV N V+ IL++ C+ ++ VA + M+ G+ PN+++Y ++ G G ++ A
Sbjct: 356 GVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKA 415
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ +L ++ G D TY +++ G C+ G + A + + G+ P+ TY M+
Sbjct: 416 LVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLG 475
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPS 344
K EA L M G +P+
Sbjct: 476 LYKKGLRREADALFRKMKEDGILPN 500
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I GY + K + ++ F + R +R +V K + +A +F+ R F
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN-VAEEIFR--RMVF 389
Query: 200 -GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
GV PN+++ N+LL LC ++E A+ +L +M G+ ++V+Y ++ G G++
Sbjct: 390 CGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
A + + +G PD TYT ++ G ++G A + M+E+G+ PNE
Sbjct: 450 AWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 201/452 (44%), Gaps = 44/452 (9%)
Query: 65 LISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKL-SRARCFPEMESLLSTLPRHS 123
+ R D + +++F + + + FLKL +R R F E+E +L L +
Sbjct: 70 VFDRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNEN 129
Query: 124 PQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNK 183
+ L H + L + Y +G A+ + + P V V+++
Sbjct: 130 VK--LTH---EALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSR 184
Query: 184 RHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSY 243
R A V+ R N +C IL+K +C +VEV ++++ G G +PN+V Y
Sbjct: 185 RLGDARKVYDEMCDRGDSVDNYSTC-ILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFY 243
Query: 244 TTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEE 303
T++GGY GD++ A V E+ KG+ P T+ +++GFC++G VA+ +++ +++E
Sbjct: 244 NTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKE 303
Query: 304 NGV-----------------------------------QPNEVTYGVMIEAYCKWKKPGE 328
G+ +P+ TY ++I CK K
Sbjct: 304 RGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEV 363
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIH 387
AV L++ +KG +P++ ++ C+ + A + + ++ + C D LIH
Sbjct: 364 AVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIH 423
Query: 388 WLCKKGKVLEARNV-FEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
L G + +A N+ + + G YN L++GLC+ G A L+ +M+++ P
Sbjct: 424 GLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILP 483
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
+A+ Y LI+GF + G+ E ++ E G
Sbjct: 484 DAYVYATLIDGFIRSGDFDEARKVFSLSVEKG 515
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 140/286 (48%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+V + NIL+ LCK + EVAV LDE GL+PN +SY ++ Y + D A ++
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKL 402
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
L ++ ++G PD TY +L+ G G + A+ + + + GV P+ Y +++ CK
Sbjct: 403 LLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCK 462
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV-LRKICGSDNTV 381
+ A L +M+ + +P + + ++D G+ + A +V+ + + K D
Sbjct: 463 TGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 382 ASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMV 440
+ +I C+ G + EA E V TY+T+I G ++ ++ A +++ M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ PN TY LINGFC G+ K +EM +PN TY
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTY 628
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 141/298 (47%), Gaps = 3/298 (1%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F + ++ G+ PN +S L++A CK E ++A ++L +M G P++V+Y ++ G
Sbjct: 367 FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
G MD A+ + +++D+G +PDA Y +L+ G C+ GR + A + +M + + P+
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAY 486
Query: 312 TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RV 370
Y +I+ + + EA + V KG ++ C G ++ A R+
Sbjct: 487 VYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRM 546
Query: 371 LRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGEL 429
+ D ST+I K+ + A +F E +++TY +LI G C +G+
Sbjct: 547 NEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDF 606
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKE-GIRILEEMCENGCLPNKSTY 486
A + +M + PN TY LI K + E + E M N C+PN+ T+
Sbjct: 607 KMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTF 664
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 138/319 (43%), Gaps = 52/319 (16%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GVSP+ N+L+ LCK A + EML ++P+ Y T++ G+ GD D A
Sbjct: 445 GVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEA 504
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+V ++KG D + ++ GFCR G L A+ M+ M E + P++ TY +I+
Sbjct: 505 RKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR---------- 369
Y K + A+ + M + P+ +++ C +G+ + A E ++
Sbjct: 565 YVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPN 624
Query: 370 ------VLRKICGSDNTVASTLIHW---------------------LCKK--GKVLE--- 397
++R + +T+ + +W KK GKVL
Sbjct: 625 VVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPD 684
Query: 398 -----ARNVFEEF-----EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
++F EF G YN+ + LC G + A D MV+KG +P+
Sbjct: 685 GSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPD 744
Query: 448 AFTYNLLINGFCKVGNAKE 466
++ +++GFC VGN+K+
Sbjct: 745 PVSFAAILHGFCVVGNSKQ 763
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 149 bits (375), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 163/360 (45%), Gaps = 6/360 (1%)
Query: 131 CGEDPLV--TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLA 188
C +P V IR Y G +L F R+ G PSV V++
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIF-RLMGLYGFNPSVYTCNAILGSVVKSGEDVSV 217
Query: 189 HSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMG 248
S K R + P+V + NIL+ LC E + ++ +M G P +V+Y TV+
Sbjct: 218 WSFLKEMLKR-KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLH 276
Query: 249 GYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQP 308
Y +G A+ +L + KG D TY +L+ CR R+ ++ DM + + P
Sbjct: 277 WYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHP 336
Query: 309 NEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW 368
NEVTY +I + K A LL +M+ G P+ ++D EGN + A +++
Sbjct: 337 NEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396
Query: 369 RVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCER 426
++ + + V+ L+ LCK + AR + + G +TY +I GLC+
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 456
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G L EA L ++M + G P+ TY+ LINGFCKVG K I+ + G PN Y
Sbjct: 457 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIY 516
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 169/367 (46%), Gaps = 8/367 (2%)
Query: 126 QFLDHCGEDPLV----TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQ 181
Q ++ G P + T + Y G+ +A+ ++S+ G+ V +
Sbjct: 257 QKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK-GVDADVCTYNMLIHDLCR 315
Query: 182 NKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVV 241
+ R + + ++ R R + PN V+ N L+ +V +A ++L+EML GL PN V
Sbjct: 316 SNRIAKGYLLLRDMRKRM-IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHV 374
Query: 242 SYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
++ ++ G+ G+ A+++ + KG P +Y VL+DG C+ A M
Sbjct: 375 TFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRM 434
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
+ NGV +TY MI+ CK EAV LL +M + G P +++ C+ G
Sbjct: 435 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRF 494
Query: 362 ERACE-VWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTL 419
+ A E V R+ R + + STLI+ C+ G + EA ++E G T+N L
Sbjct: 495 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVL 554
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
+ LC+ G++ EA M G PN +++ LING+ G + + +EM + G
Sbjct: 555 VTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH 614
Query: 480 LPNKSTY 486
P TY
Sbjct: 615 HPTFFTY 621
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++P+ VS +LL LCK E ++A M G+ ++YT ++ G G +D A
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ +L E+ G PD TY+ L++GFC+ GR A +++ + G+ PN + Y +I
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
C+ EA+ + E M+ +GH +V LC+ G V A E R + N
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPN 582
Query: 380 TVA-STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
TV+ LI+ G+ L+A +VF+E + G + TY +L+ GLC+ G L EA +
Sbjct: 583 TVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK 642
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ A + YN L+ CK GN + + + EM + LP+ TY
Sbjct: 643 SLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTY 691
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 148/298 (49%), Gaps = 3/298 (1%)
Query: 191 VFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY 250
V N ++ G+ P++V+ + L+ CKV + A ++ + +GL PN + Y+T++
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523
Query: 251 AWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
G + A+R+ ++ +G D T+ VLV C+ G++ A + M M +G+ PN
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV 370
V++ +I Y + +A ++ ++M + GH P+ ++ LC+ G++ A + +
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 371 LRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGE 428
L + D + +TL+ +CK G + +A ++F E S+ TY +LI+GLC +G+
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Query: 429 LCEAARLWDDMVEKGRA-PNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
A + +G PN Y ++G K G K GI E+M G P+ T
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVT 761
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 140/333 (42%), Gaps = 39/333 (11%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F+ G +P++V+ N ++ ++ ++E +L EM PN+ +Y ++ GY+
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
R D+ + + ++ G PD T LV G C L +K++ GV+ +
Sbjct: 806 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 865
Query: 312 TYGVMIEAYC-----KWK------------------------------KPGEAVNLLEDM 336
T+ ++I C W + E+ +L +M
Sbjct: 866 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM 925
Query: 337 VRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKICGSDNTVASTLIHWLCKKGK 394
++G P S +++ LC G+++ A V + KIC N S ++ L K GK
Sbjct: 926 SKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKIC-PPNVAESAMVRALAKCGK 984
Query: 395 VLEARNVFE-EFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNL 453
EA + + V ++ ++ TL+ C+ G + EA L M G + +YN+
Sbjct: 985 ADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNV 1044
Query: 454 LINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
LI G C G+ + EEM +G L N +TY
Sbjct: 1045 LITGLCAKGDMALAFELYEEMKGDGFLANATTY 1077
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 135/289 (46%), Gaps = 5/289 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+ ++C+ L+ +C+ N +E+ +++L + G+ + ++ ++ G+++ A
Sbjct: 824 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 883
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ + G + D T +V R R + V+ +M + G+ P Y +I
Sbjct: 884 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 943
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
C+ A + E+M+ P + +V L + G + A + R + K+
Sbjct: 944 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKM-KLVP 1002
Query: 380 TVAS--TLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLW 436
T+AS TL+H CK G V+EA + G L++YN LI GLC +G++ A L+
Sbjct: 1003 TIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELY 1062
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIR-ILEEMCENGCLPNKS 484
++M G NA TY LI G A G IL+++ G + + S
Sbjct: 1063 EEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDLLARGFITSMS 1111
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 154/384 (40%), Gaps = 45/384 (11%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I GYG +G+ A F + +++G P+ + R A K S
Sbjct: 590 INGYGNSGEGLKAFSVFDEM-TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK-SLHAV 647
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD---- 255
+ + V N LL A+CK + AV + EM+ ++P+ +YT+++ G +G
Sbjct: 648 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIA 707
Query: 256 -----------------------MDGAMRV--------LGEVLDK-GWAPDATTYTVLVD 283
+DG + E +D G PD T ++D
Sbjct: 708 ILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMID 767
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVP 343
G+ R G++ ++ +M PN TY +++ Y K K + L ++ G +P
Sbjct: 768 GYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILP 827
Query: 344 SSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS---DNTVASTLIHWLCKKGKVLEARN 400
C +V +CE +E ++ + IC D + LI C G++ A +
Sbjct: 828 DKLTCHSLVLGICESNMLEIGLKILKAF--ICRGVEVDRYTFNMLISKCCANGEINWAFD 885
Query: 401 VFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFC 459
+ + G T + +++ L E+ + +M ++G +P + Y LING C
Sbjct: 886 LVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLC 945
Query: 460 KVGNAKEGIRILEEMCENG-CLPN 482
+VG+ K + EEM + C PN
Sbjct: 946 RVGDIKTAFVVKEEMIAHKICPPN 969
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 166/400 (41%), Gaps = 10/400 (2%)
Query: 91 HHP--LPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGK 148
HHP Y ++ L + E E L +L H+ +D + L+TA+ G K
Sbjct: 614 HHPTFFTYGSLLKGLCKGGHLREAEKFLKSL--HAVPAAVDTVMYNTLLTAMCKSGNLAK 671
Query: 149 PDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSC 208
A+ F + R I P + + +A K + R V PN V
Sbjct: 672 ---AVSLFGEMVQR-SILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
+ + K + + + ++M +G P++V+ ++ GY+ G ++ +L E+ +
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 787
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
+ P+ TTY +L+ G+ ++ + + + + NG+ P+++T ++ C+
Sbjct: 788 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 847
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-DNTVASTLIH 387
+ +L+ + +G ++ C G + A ++ +V+ + S D ++
Sbjct: 848 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 907
Query: 388 WLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
L + + E+R V E ++ Y LI GLC G++ A + ++M+ P
Sbjct: 908 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ ++ K G A E +L M + +P +++
Sbjct: 968 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASF 1007
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PNV + +++AL K + + A +L ML M LVP + S+TT+M G++ A+ +
Sbjct: 968 PNVAE-SAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 1026
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+ + G D +Y VL+ G C +G + A ++ ++M+ +G N TY +I
Sbjct: 1027 RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLA 1086
Query: 323 WKKPGEAVN-LLEDMVRKGHVPSSGL 347
+ + +L+D++ +G + S L
Sbjct: 1087 RETAFSGADIILKDLLARGFITSMSL 1112
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 3/191 (1%)
Query: 156 FLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHS-VFKNSRTRFGVSPNVVSCNILLKA 214
+++ + LGI S+ V N+ HR S + + ++ G+SP L+
Sbjct: 886 LVKVMTSLGI--SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLING 943
Query: 215 LCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPD 274
LC+V +++ A V +EM+ + P V+ + ++ A G D A +L +L P
Sbjct: 944 LCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPT 1003
Query: 275 ATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLE 334
++T L+ C+ G ++ A+++ M G++ + V+Y V+I C A L E
Sbjct: 1004 IASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYE 1063
Query: 335 DMVRKGHVPSS 345
+M G + ++
Sbjct: 1064 EMKGDGFLANA 1074
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 165/344 (47%), Gaps = 7/344 (2%)
Query: 146 AGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNV 205
AG D A + F ++S G+ P+ R + + A ++ S F V
Sbjct: 116 AGLHDLAGQMFECMKSD-GVSPNNRLLGFLVSSFAEKGKLHFATALLLQS---FEVEGCC 171
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGE 265
+ N LL L K++ VE A+++ DE L + ++ ++ G G + A+ +LG
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV-QPNEVTYGVMIEAYCKWK 324
+ G PD TY L+ GFC+ L A ++ D++ V P+ VTY MI YCK
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 325 KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV-WRVLRKICGSDNTVAS 383
K EA +LL+DM+R G P++ +VD + G + A E+ +++ C D +
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 384 TLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEK 442
+LI C+ G+V + ++EE G + TY+ LI LC L +A L + K
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 443 GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P F YN +I+GFCK G E I+EEM + C P+K T+
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 145/291 (49%), Gaps = 3/291 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
RF + + NIL++ LC V + E A+ +L M G G P++V+Y T++ G+ +++
Sbjct: 199 RFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN 258
Query: 258 GAMRVLGEVLDKG-WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
A + +V +PD TYT ++ G+C+ G++ A ++DDM G+ P VT+ V+
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG 376
++ Y K + A + M+ G P ++D C G V + +W +
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 377 SDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVASL-LTYNTLIAGLCERGELCEAAR 434
N S LI+ LC + ++L+AR + + + YN +I G C+ G++ EA
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+ ++M +K P+ T+ +LI G C G E + I +M GC P+K T
Sbjct: 439 IVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 154/310 (49%), Gaps = 4/310 (1%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
IRG GK + AL L + S G P + ++ A +FK+ ++
Sbjct: 213 IRGLCGVGKAEKALE-LLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
SP+VV+ ++ CK ++ A +LD+ML +G+ P V++ ++ GYA G+M A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ G+++ G PD T+T L+DG+CR G++ ++ ++M G+ PN TY ++I A
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA-CEVWRVLRKICGSD 378
C + +A LL + K +P + V+D C+ G V A V + +K C D
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ LI C KG++ EA ++F + G +T ++L++ L + G EA L +
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-N 510
Query: 438 DMVEKGRAPN 447
+ KG++ N
Sbjct: 511 QIARKGQSNN 520
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 160/360 (44%), Gaps = 12/360 (3%)
Query: 130 HCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAH 189
HC E LV + + PDS L F + L S + N H +
Sbjct: 35 HCPEAWLVKIVSTLFVYRVPDSDL-CFCYLSKNLNPFISFEVVKK-----LDNNPH-IGF 87
Query: 190 SVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGG 249
++ SR + + + + N+L ++LCK ++A ++ + M G+ PN ++
Sbjct: 88 RFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 250 YAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
+A +G + A +L + + L++ + R+ A+K+ D+ +
Sbjct: 148 FAEKGKLHFATALLLQSFEVEGC--CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND 205
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
T+ ++I C K +A+ LL M G P ++ C+ + +A E+++
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 370 VLRK--ICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCER 426
++ +C D +++I CK GK+ EA ++ ++ G + +T+N L+ G +
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
GE+ A + M+ G P+ T+ LI+G+C+VG +G R+ EEM G PN TY
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 165/344 (47%), Gaps = 7/344 (2%)
Query: 146 AGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNV 205
AG D A + F ++S G+ P+ R + + A ++ S F V
Sbjct: 116 AGLHDLAGQMFECMKSD-GVSPNNRLLGFLVSSFAEKGKLHFATALLLQS---FEVEGCC 171
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGE 265
+ N LL L K++ VE A+++ DE L + ++ ++ G G + A+ +LG
Sbjct: 172 MVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGV 231
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV-QPNEVTYGVMIEAYCKWK 324
+ G PD TY L+ GFC+ L A ++ D++ V P+ VTY MI YCK
Sbjct: 232 MSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAG 291
Query: 325 KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV-WRVLRKICGSDNTVAS 383
K EA +LL+DM+R G P++ +VD + G + A E+ +++ C D +
Sbjct: 292 KMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFT 351
Query: 384 TLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEK 442
+LI C+ G+V + ++EE G + TY+ LI LC L +A L + K
Sbjct: 352 SLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASK 411
Query: 443 GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P F YN +I+GFCK G E I+EEM + C P+K T+
Sbjct: 412 DIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITF 455
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 145/291 (49%), Gaps = 3/291 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
RF + + NIL++ LC V + E A+ +L M G G P++V+Y T++ G+ +++
Sbjct: 199 RFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELN 258
Query: 258 GAMRVLGEVLDKG-WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
A + +V +PD TYT ++ G+C+ G++ A ++DDM G+ P VT+ V+
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG 376
++ Y K + A + M+ G P ++D C G V + +W +
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 377 SDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVASL-LTYNTLIAGLCERGELCEAAR 434
N S LI+ LC + ++L+AR + + + YN +I G C+ G++ EA
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+ ++M +K P+ T+ +LI G C G E + I +M GC P+K T
Sbjct: 439 IVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 154/310 (49%), Gaps = 4/310 (1%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
IRG GK + AL L + S G P + ++ A +FK+ ++
Sbjct: 213 IRGLCGVGKAEKALE-LLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
SP+VV+ ++ CK ++ A +LD+ML +G+ P V++ ++ GYA G+M A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ G+++ G PD T+T L+DG+CR G++ ++ ++M G+ PN TY ++I A
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA-CEVWRVLRKICGSD 378
C + +A LL + K +P + V+D C+ G V A V + +K C D
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ LI C KG++ EA ++F + G +T ++L++ L + G EA L +
Sbjct: 452 KITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHL-N 510
Query: 438 DMVEKGRAPN 447
+ KG++ N
Sbjct: 511 QIARKGQSNN 520
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 160/360 (44%), Gaps = 12/360 (3%)
Query: 130 HCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAH 189
HC E LV + + PDS L F + L S + N H +
Sbjct: 35 HCPEAWLVKIVSTLFVYRVPDSDL-CFCYLSKNLNPFISFEVVKK-----LDNNPH-IGF 87
Query: 190 SVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGG 249
++ SR + + + + N+L ++LCK ++A ++ + M G+ PN ++
Sbjct: 88 RFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSS 147
Query: 250 YAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
+A +G + A +L + + L++ + R+ A+K+ D+ +
Sbjct: 148 FAEKGKLHFATALLLQSFEVEGC--CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCND 205
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
T+ ++I C K +A+ LL M G P ++ C+ + +A E+++
Sbjct: 206 TKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK 265
Query: 370 VLRK--ICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCER 426
++ +C D +++I CK GK+ EA ++ ++ G + +T+N L+ G +
Sbjct: 266 DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKA 325
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
GE+ A + M+ G P+ T+ LI+G+C+VG +G R+ EEM G PN TY
Sbjct: 326 GEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTY 385
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 201/427 (47%), Gaps = 10/427 (2%)
Query: 64 SLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHS 123
SL+ R+ DP L IF A + + +H+ Y + L R + F ++++L + ++
Sbjct: 61 SLMKRERDPQGVLDIFNKA-SQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQM-KYE 118
Query: 124 PQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNK 183
+F E + +R + + D + F I+ ++PS+ + +
Sbjct: 119 TCRF----QESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSG 174
Query: 184 RHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGL-VPNVVS 242
L+ + ++ G+ PN NIL+K CK ++ A V++EM G+ PN ++
Sbjct: 175 EVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSIT 234
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDK-GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
Y+T+M A+ + +++ K G +PD T+ V+++GFCR G + A K++D M
Sbjct: 235 YSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFM 294
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
++NG PN Y ++ +CK K EA +++ + G + +++ C G
Sbjct: 295 KKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGET 354
Query: 362 ERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTL 419
+ A ++ ++ C +D + ++ L +G+ EA + +++ V + +Y +
Sbjct: 355 DEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRII 414
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
+ LC GEL +A + M E+G P+ T+N L+ C+ G + G+R+L G
Sbjct: 415 LNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGL 474
Query: 480 LPNKSTY 486
+P ++
Sbjct: 475 IPGPKSW 481
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 127/259 (49%), Gaps = 2/259 (0%)
Query: 184 RHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSY 243
R + A +F++ ++ G+SP+ V+ N+++ C+ EVE A ++LD M G PNV +Y
Sbjct: 247 RSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNY 306
Query: 244 TTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEE 303
+ +M G+ G + A + EV G D YT L++ FCR G A+K++ +M+
Sbjct: 307 SALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKA 366
Query: 304 NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVER 363
+ + + +TY V++ + EA+ +L+ +G + G +++ LC G +E+
Sbjct: 367 SRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEK 426
Query: 364 ACEVWRVL-RKICGSDNTVASTLIHWLCKKGKV-LEARNVFEEFEGGSVASLLTYNTLIA 421
A + V+ + + + L+ LC+ G + R + G + ++ ++
Sbjct: 427 AVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVE 486
Query: 422 GLCERGELCEAARLWDDMV 440
+C+ +L L D +V
Sbjct: 487 SICKERKLVHVFELLDSLV 505
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 177/423 (41%), Gaps = 77/423 (18%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I Y G + A+ +F R++ RP V ++ + + N +
Sbjct: 134 ISAYAKMGMAEKAVESFGRMK-EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC 192
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
SPN+ + IL+ L K A ++ D+M G G+ PN V+YT ++ G RG D A
Sbjct: 193 NCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDA 252
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG-------------- 305
++ E+ G PD+ + L+DGFC+ GR+V A +++ E++G
Sbjct: 253 RKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDG 312
Query: 306 ---------------------VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS 344
++P+ + Y ++I+ K K +A+ LL M KG P
Sbjct: 313 LFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD 372
Query: 345 SGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFE 403
+ V+ LC G +E + + + D + LI +C+ G V EA +F
Sbjct: 373 TYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFT 432
Query: 404 EFE-GGSVASLLTYNTLIAGLCERGELCEAA-----------------------RLWDDM 439
E E G S+ T+N LI GLC+ GEL EA R +D M
Sbjct: 433 EIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTM 492
Query: 440 VEK----------------GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNK 483
VE G +P+ +YN+LINGFC+ G+ +++L + G P+
Sbjct: 493 VESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDS 552
Query: 484 STY 486
TY
Sbjct: 553 VTY 555
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 137/295 (46%), Gaps = 13/295 (4%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG- 258
GVS + +L+ A K+ E AV M P+V +Y ++ R ++
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVIL-RVMMREEVFFM 180
Query: 259 -AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A V E+L +P+ T+ +L+DG ++GR A K+ DDM G+ PN VTY ++I
Sbjct: 181 LAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILI 240
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
C+ +A L +M G+ P S ++D C+ G + A E+ R+ K
Sbjct: 241 SGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEK---- 296
Query: 378 DNTV-----ASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCE 431
D V S+LI L + + +A ++ ++ ++ Y LI GL + G++ +
Sbjct: 297 DGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIED 356
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A +L M KG +P+ + YN +I C G +EG + EM E P+ T+
Sbjct: 357 ALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTH 411
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 136/280 (48%), Gaps = 3/280 (1%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
+++ L + N ++ + L+E+ G+ + + ++ YA G + A+ G + +
Sbjct: 97 LVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEF 156
Query: 270 GWAPDATTYTVLVDGFCRQG-RLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
PD TY V++ R+ + A V ++M + PN T+G++++ K + +
Sbjct: 157 DCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSD 216
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIH 387
A + +DM +G P+ ++ LC+ G+ + A +++ ++ ++VA + L+
Sbjct: 217 AQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLD 276
Query: 388 WLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
CK G+++EA + FE G V L Y++LI GL +A L+ +M++K P
Sbjct: 277 GFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKP 336
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ Y +LI G K G ++ +++L M G P+ Y
Sbjct: 337 DIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCY 376
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 165/391 (42%), Gaps = 22/391 (5%)
Query: 96 YRAIFLKLSRARCFPEMESLLSTLPRH--SPQQFLDHCGEDPLVTAIRGYGLAGKPDSAL 153
Y + LS+A + LLS++P SP + + ++ A+ G GL + S
Sbjct: 341 YTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYC----YNAVIKALCGRGLLEEGRSLQ 396
Query: 154 RTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLK 213
ES P +N R A +F + G SP+V + N L+
Sbjct: 397 LEMSETESF----PDACTHTILICSMCRNGLVREAEEIFTEIE-KSGCSPSVATFNALID 451
Query: 214 ALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW-----RGDMDGAMRVLGEVLD 268
LCK E++ A R+L + +G ++ + G ++ G + A R L D
Sbjct: 452 GLCKSGELKEA-RLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFAD 510
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
G +PD +Y VL++GFCR G + A+K+++ ++ G+ P+ VTY +I + + E
Sbjct: 511 TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEE 570
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIH 387
A L H P+ + ++ C + V A +W + L+KI D+ A+ I
Sbjct: 571 AFKLFYAKDDFRHSPA--VYRSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETANE-IE 627
Query: 388 WLCKKGKVLEA-RNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
K+G+ A R + E +L Y + GLC+ G EA ++ + EK
Sbjct: 628 QCFKEGETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVLREKKILV 687
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCEN 477
+ LI+G CK I + +N
Sbjct: 688 TPPSCVKLIHGLCKREQLDAAIEVFLYTLDN 718
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/430 (25%), Positives = 187/430 (43%), Gaps = 44/430 (10%)
Query: 58 HPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLS 117
P+ + ++ R D + +++ FR + H P Y ++ L ++R R F ++ +L
Sbjct: 64 QPEFVIGVLRRLKDVNRAIEYFRWYERRTELP-HCPESYNSLLLVMARCRNFDALDQILG 122
Query: 118 TLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXX 177
+ ++ G+G PSV
Sbjct: 123 EM-------------------SVAGFG----------------------PSVNTCIEMVL 141
Query: 178 XXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLV 237
V+ + R + V + R +F P + L+ A VN ++ + + +M +G
Sbjct: 142 GCVKANKLREGYDVVQMMR-KFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYE 200
Query: 238 PNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKV 297
P V +TT++ G+A G +D A+ +L E+ D Y V +D F + G++ A K
Sbjct: 201 PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKF 260
Query: 298 MDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCE 357
++E NG++P+EVTY MI CK + EAV + E + + VP + ++
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS 320
Query: 358 EGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVASLLTY 416
G + A + R + +A + ++ L K GKV EA VFEE + + +L TY
Sbjct: 321 AGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTY 380
Query: 417 NTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE 476
N LI LC G+L A L D M + G PN T N++++ CK E + EEM
Sbjct: 381 NILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDY 440
Query: 477 NGCLPNKSTY 486
C P++ T+
Sbjct: 441 KVCTPDEITF 450
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 153/338 (45%), Gaps = 5/338 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I GYG AGK D A R ++ G PSV + + A VF+ +
Sbjct: 313 TMIMGYGSAGKFDEAYSLLERQRAK-GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+PN+ + NIL+ LC+ +++ A + D M GL PNV + ++ +D
Sbjct: 372 --DAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A + E+ K PD T+ L+DG + GR+ A KV + M ++ + N + Y +I
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICG 376
+ + + + + +DM+ + P L +D + + G E+ ++ ++ +
Sbjct: 490 KNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV 549
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARL 435
D S LIH L K G E +F E G V YN +I G C+ G++ +A +L
Sbjct: 550 PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQL 609
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEE 473
++M KG P TY +I+G K+ E + EE
Sbjct: 610 LEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/404 (22%), Positives = 177/404 (43%), Gaps = 26/404 (6%)
Query: 103 LSRARCFPEMESLLSTLPRHSPQQFLDH------------CGEDPLV--TAIRGYGLAGK 148
+ +A FP + ++ + R Q LD C D + + I G G G+
Sbjct: 403 MQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGR 462
Query: 149 PDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQN----KRHRLAHSVFKNSRTRFGVSPN 204
D A + + ++ + R ++N R H ++K+ + SP+
Sbjct: 463 VDDAYKVYEKM-----LDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ-NCSPD 516
Query: 205 VVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLG 264
+ N + + K E E + +E+ VP+ SY+ ++ G G + +
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 265 EVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWK 324
+ ++G D Y +++DGFC+ G++ A +++++M+ G +P VTYG +I+ K
Sbjct: 577 SMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKID 636
Query: 325 KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-S 383
+ EA L E+ K + + ++D + G ++ A + L + + N +
Sbjct: 637 RLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696
Query: 384 TLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEK 442
+L+ L K ++ EA F+ E + +TY LI GLC+ + +A W +M ++
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756
Query: 443 GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G P+ +Y +I+G K GN E + + NG +P+ + Y
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 143/300 (47%), Gaps = 4/300 (1%)
Query: 146 AGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNV 205
AG+P+ F I++R + P R ++ + +F + + + G +
Sbjct: 530 AGEPEKGRAMFEEIKARRFV-PDARSYSILIHGLIKAGFANETYELFYSMKEQ-GCVLDT 587
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGE 265
+ NI++ CK +V A ++L+EM G P VV+Y +V+ G A +D A + E
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK 325
K + Y+ L+DGF + GR+ A +++++ + G+ PN T+ +++A K ++
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 326 PGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-ST 384
EA+ + M P+ +++ LC+ +A W+ ++K +T++ +T
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 385 LIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKG 443
+I L K G + EA +F+ F+ G V YN +I GL +A L+++ +G
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 81/174 (46%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++PN+ + N LL AL K E+ A+ M + PN V+Y ++ G + A
Sbjct: 687 GLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKA 746
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
E+ +G P +YT ++ G + G + A + D + NG P+ Y MIE
Sbjct: 747 FVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
+ +A +L E+ R+G + C ++D L + +E+A V VLR+
Sbjct: 807 LSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRE 860
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 152/309 (49%), Gaps = 25/309 (8%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PN ++ N++LK CKV +E A + + + + ++ SY + G G A V
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETV 348
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
L ++ DKG P +Y +L+DG C+ G L A ++ M+ NGV P+ VTYG ++ YC
Sbjct: 349 LKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCS 408
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSDNTV 381
K A +LL++M+R +P++ C ++ L + G + A E+ R + K G D
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVT 468
Query: 382 ASTLIHWLCKKGKVLEARNVFEE------------------------FEGGSVASLLTYN 417
+ ++ LC G++ +A + + E + L+TY+
Sbjct: 469 CNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYS 528
Query: 418 TLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCEN 477
TL+ GLC+ G EA L+ +M+ + P++ YN+ I+ FCK G R+L++M +
Sbjct: 529 TLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKK 588
Query: 478 GCLPNKSTY 486
GC + TY
Sbjct: 589 GCHKSLETY 597
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 156/306 (50%), Gaps = 7/306 (2%)
Query: 188 AHSVFKNSRTRFGVS-PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTV 246
A F+ R+RF + P+V N+LL++ K VE + +M+ G+ P ++ +
Sbjct: 94 AFPQFQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLL 153
Query: 247 MGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
+ +D A + E+ +KG P+ T+ +LV G+C+ G +++++ ME GV
Sbjct: 154 IRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGV 213
Query: 307 QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE 366
PN+V Y ++ ++C+ + ++ ++E M +G VP + LC+EG V A
Sbjct: 214 LPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASR 273
Query: 367 VWR--VLRKICG---SDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLI 420
++ L + G ++ + ++ CK G + +A+ +FE E +ASL +YN +
Sbjct: 274 IFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWL 333
Query: 421 AGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL 480
GL G+ EA + M +KG P+ ++YN+L++G CK+G + I+ M NG
Sbjct: 334 QGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC 393
Query: 481 PNKSTY 486
P+ TY
Sbjct: 394 PDAVTY 399
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 137/275 (49%), Gaps = 1/275 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++++ + LL LCK A + EM+G L P+ V+Y + + +G + A RV
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRV 581
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
L ++ KG TY L+ G + ++ +MD+M+E G+ PN TY I+ C+
Sbjct: 582 LKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCE 641
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
+K +A NLL++M++K P+ +++ C+ + + A EV+ ICG +
Sbjct: 642 GEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLY 701
Query: 383 STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
S + + L G++L+A + E + G Y L+ LC++ EL A+ + M++
Sbjct: 702 SLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMID 761
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE 476
+G + +I+G K+GN KE ++M E
Sbjct: 762 RGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 1/165 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+SPN+ + N ++ LC+ +VE A +LDEM+ + PNV S+ ++ + D D A
Sbjct: 624 GISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMA 683
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
V E Y+++ + G+L+ A ++++ + + G + Y ++E+
Sbjct: 684 QEVF-ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVES 742
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
CK + A +L M+ +G+ V+D L + GN + A
Sbjct: 743 LCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA 787
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 97/217 (44%), Gaps = 9/217 (4%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A V K+ + G ++ + N L+ L N++ ++DEM G+ PN+ +Y T +
Sbjct: 578 AFRVLKDMEKK-GCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAI 636
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
++ A +L E++ K AP+ ++ L++ FC+ V + ++ E V
Sbjct: 637 QYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK----VPDFDMAQEVFETAVS 692
Query: 308 ---PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
E Y +M + +A LLE ++ +G + L +V+ LC++ +E A
Sbjct: 693 ICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVA 752
Query: 365 CEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARN 400
+ +++ + G D +I L K G EA +
Sbjct: 753 SGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANS 789
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 124/511 (24%), Positives = 210/511 (41%), Gaps = 70/511 (13%)
Query: 86 HRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHC---GEDPLVTAIRG 142
++ SH + + L RAR + L ++ R S + C + + IR
Sbjct: 93 NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRS-----NGCVKLQDRYFNSLIRS 147
Query: 143 YGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVS 202
YG AG +++ F ++ ++GI PSV ++ R +AH +F R +GV+
Sbjct: 148 YGNAGLFQESVKLFQTMK-QMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVT 206
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+ + N L+ CK + V+ A R+ +M P+VV+Y T++ G G + A V
Sbjct: 207 PDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNV 266
Query: 263 LGEVLDKGWA--PDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY------- 313
L +L K P+ +YT LV G+C + + A+ V DM G++PN VTY
Sbjct: 267 LSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGL 326
Query: 314 ------------------------------GVMIEAYCKWKKPGEAVNLLEDMVRKGHVP 343
++I+A+C A+ + ++M+ P
Sbjct: 327 SEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHP 386
Query: 344 SSGLCCKVVDVLCEEGNVERACEVWRVLRK---ICGSDN-----TVASTLIHWLCKKGKV 395
S ++ LC +RA ++ L + + G D + + +LC GK
Sbjct: 387 DSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKT 446
Query: 396 LEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLI 455
+A VF + V +Y TLI G C G+ A L M+ + P+ TY LLI
Sbjct: 447 KQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLI 506
Query: 456 NGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXMNQEINKVVALAMSTGV 515
+G K+G A L+ M + LP +T+ N+ V
Sbjct: 507 DGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTL------- 559
Query: 516 DGELWDLLVKHVVGNLDINATELDRILIPNA 546
+L K + N+D+ +T++ R+L +A
Sbjct: 560 ------MLEKRIRQNIDL-STQVVRLLFSSA 583
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 155/389 (39%), Gaps = 54/389 (13%)
Query: 137 VTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSR 196
T +RGY + + D A+ F + SR G++P+ + R+ +
Sbjct: 285 TTLVRGYCMKQEIDEAVLVFHDMLSR-GLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGN 343
Query: 197 TRFGV-SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
F +P+ + NIL+KA C ++ A++V EML M L P+ SY+ ++ R +
Sbjct: 344 DAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403
Query: 256 MDGAMRVLGEVLDK--------------GWAP---------------------------D 274
D A + E+ +K + P D
Sbjct: 404 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQD 463
Query: 275 ATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLE 334
+Y L+ G CR+G+ A +++ M P+ TY ++I+ K + A + L+
Sbjct: 464 PPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQ 523
Query: 335 DMVRKGHVPSSGLCCKVVDVLCEEGNV-ERACEVWRVLRKICGSDNTVASTLIHWLC--- 390
M+R ++P + V+ L + E C V +L K + +++ ++ L
Sbjct: 524 RMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSA 583
Query: 391 -KKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAF 449
K+ L R +++ L+ L+ LCE +L +A L +EK + +
Sbjct: 584 QKEKAFLIVRLLYDN------GYLVKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDID 637
Query: 450 TYNLLINGFCKVGNAKEGIRILEEMCENG 478
T N +I G CK E + E+ E G
Sbjct: 638 TCNTVIEGLCKHKRHSEAFSLYNELVELG 666
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 120/268 (44%), Gaps = 10/268 (3%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P + N + + LC + + A +V +++ G V + SY T++ G+ G A +
Sbjct: 428 PLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYEL 486
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
L +L + + PD TY +L+DG + G + A + M + P T+ ++ K
Sbjct: 487 LVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAK 546
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN--- 379
K E+ L+ M+ K + L +VV +L E+A + R+L DN
Sbjct: 547 RKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLL-----YDNGYL 601
Query: 380 TVASTLIHWLCKKGKVLEARN-VFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
L+ +LC+ K+L+A V E + + T NT+I GLC+ EA L+++
Sbjct: 602 VKMEELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNE 661
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKE 466
+VE G + +L N G +E
Sbjct: 662 LVELGNHQQLSCHVVLRNALEAAGKWEE 689
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 155/292 (53%), Gaps = 6/292 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G PNV LL LCK N ++ A+RV++ M+ G++P+ +YT ++ RG++ A
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
M+++ ++ D G+ + TY LV G C G L +++ ++ + + G+ PN TY ++EA
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
K + EAV LL++++ KG P+ ++ C+EG + A ++R L N
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 380 TVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWD 437
V+ + L+ LC G+ EA ++ E +GG A S++TYN LI L G +A ++
Sbjct: 281 VVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLK 340
Query: 438 DMVEKGRAP---NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M KG A +YN +I CK G ++ L+EM C PN+ TY
Sbjct: 341 EM-SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTY 391
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 131/249 (52%), Gaps = 2/249 (0%)
Query: 228 LDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCR 287
L+ ++ G PNV T ++ + A+RV+ ++ G PDA+ YT LV+ C+
Sbjct: 94 LESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCK 153
Query: 288 QGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGL 347
+G + A+++++ ME++G N VTY ++ C +++ +E +++KG P++
Sbjct: 154 RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFT 213
Query: 348 CCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFE 406
+++ +E + A ++ + G N V+ + L+ CK+G+ +A +F E
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 407 G-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
G A++++YN L+ LC G EA L +M RAP+ TYN+LIN G +
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 466 EGIRILEEM 474
+ +++L+EM
Sbjct: 334 QALQVLKEM 342
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 42/328 (12%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++PN + + LL+A K + AV++LDE++ G PN+VSY ++ G+ G D A
Sbjct: 206 GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDA 265
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
M + E+ KG+ + +Y +L+ C GR A ++ +M+ P+ VTY ++I +
Sbjct: 266 MALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINS 325
Query: 320 YCKWKKPGEAVNLLEDMVRKGH---VPSSGLCCKVVDVLCEEGNVE-----------RAC 365
+ +A+ +L++M + H V ++ V+ LC+EG V+ R C
Sbjct: 326 LAFHGRTEQALQVLKEMSKGNHQFRVTATSYN-PVIARLCKEGKVDLVVKCLDEMIYRRC 384
Query: 366 E----VWRVLRKICGSDNTVA---------------------STLIHWLCKKGKVLEARN 400
+ + + +C ++ V ++I LC+KG A
Sbjct: 385 KPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQ 444
Query: 401 V-FEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRA-PNAFTYNLLINGF 458
+ +E G TY+ LI GLC G A + M E P +N +I G
Sbjct: 445 LLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGL 504
Query: 459 CKVGNAKEGIRILEEMCENGCLPNKSTY 486
CK+ + + E M E +PN++TY
Sbjct: 505 CKIRRTDLAMEVFEMMVEKKRMPNETTY 532
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 140/284 (49%), Gaps = 13/284 (4%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G NVVS NILL+ LC E A +L EM G P+VV+Y ++ A+ G + A
Sbjct: 276 GFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQA 335
Query: 260 MRVLGEVLDKG---WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
++VL E + KG + AT+Y ++ C++G++ +K +D+M +PNE TY
Sbjct: 336 LQVLKE-MSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA- 393
Query: 317 IEAYCKW-KKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKIC 375
I + C+ K EA +++ + K + V+ LC +GN A ++ + + C
Sbjct: 394 IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTR-C 452
Query: 376 G--SDNTVASTLIHWLCKKGK---VLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELC 430
G D S LI LC +G +E ++ EE E ++ +N +I GLC+
Sbjct: 453 GFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCK-PTVDNFNAMILGLCKIRRTD 511
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
A +++ MVEK R PN TY +L+ G + +L+E+
Sbjct: 512 LAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 107/233 (45%), Gaps = 8/233 (3%)
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
D A + G W PD + + D + L + ++ + G +PN +
Sbjct: 57 DSAFTITG----SSWKPDLDSGSFSDDPRSDEPNLSDSFSHLESLVTGGHKPNVAHSTQL 112
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG 376
+ CK + +A+ ++E MV G +P + +V+ LC+ GNV A ++ +
Sbjct: 113 LYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGY 172
Query: 377 SDNTVA-STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLI-AGLCERGELCEAA 433
NTV + L+ LC G + ++ E + G + TY+ L+ A ERG EA
Sbjct: 173 PSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGT-DEAV 231
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+L D+++ KG PN +YN+L+ GFCK G + + + E+ G N +Y
Sbjct: 232 KLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSY 284
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 38/211 (18%)
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYT--------------------- 244
S N ++ LCK +V++ V+ LDEM+ PN +Y
Sbjct: 354 TSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQS 413
Query: 245 --------------TVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGR 290
+V+ +G+ A ++L E+ G+ PDA TY+ L+ G C +G
Sbjct: 414 LSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGM 473
Query: 291 LVAAIKVMDDMEEN-GVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCC 349
A++V+ MEE+ +P + MI CK ++ A+ + E MV K +P+
Sbjct: 474 FTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYA 533
Query: 350 KVVDVLCEEGNVERACEVWRV--LRKICGSD 378
+V+ + E +E A EV LRK+ G +
Sbjct: 534 ILVEGIAHEDELELAKEVLDELRLRKVIGQN 564
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 92/293 (31%), Positives = 148/293 (50%), Gaps = 4/293 (1%)
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
T G+ PNV I + LC+ N++E A ++ + M G++PN+ +Y+ ++ GY G++
Sbjct: 226 TSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNV 285
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
A + E+L P+ + LVDGFC+ LV A + M + GV PN Y +
Sbjct: 286 RQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCL 345
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR--KI 374
I +CK EAV LL +M P +++ LC E V A +++ ++ +I
Sbjct: 346 IHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAA 433
S T S LIH CK+ + +A ++ E V +++T++TLI G C ++ A
Sbjct: 406 FPSSATYNS-LIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAM 464
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L+ +M KG P+ TY LI+ K N KE +R+ +M E G PN T+
Sbjct: 465 GLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTF 517
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 153/298 (51%), Gaps = 5/298 (1%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A S+F + +FGV PN+ N L+ CK + AV +L EM + L P+V +YT ++
Sbjct: 323 ARSLFVH-MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILI 381
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G + A R+ ++ ++ P + TY L+ G+C++ + A+ + +M +GV+
Sbjct: 382 NGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVE 441
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
PN +T+ +I+ YC + A+ L +M KG VP ++D +E N++ A +
Sbjct: 442 PNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRL 501
Query: 368 WRVLRK--ICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLC 424
+ + + I +D+T A L+ K+G++ A + ++E + S + + + LI GLC
Sbjct: 502 YSDMLEAGIHPNDHTFA-CLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC 560
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
+ G + A+R + DM G P+ +Y ++ G + + + + +M + G LPN
Sbjct: 561 QNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPN 618
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 144/289 (49%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+V +L + K ++LDEM +G+ PNV YT + M+ A
Sbjct: 194 GLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA 253
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ + G P+ TY+ ++DG+C+ G + A + ++ + PN V +G +++
Sbjct: 254 EKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG 313
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+CK ++ A +L MV+ G P+ + ++ C+ GN+ A + + + S +
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 380 TVAST-LIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWD 437
T LI+ LC + +V EA +F++ + + S TYN+LI G C+ + +A L
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M G PN T++ LI+G+C V + K + + EM G +P+ TY
Sbjct: 434 EMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTY 482
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 142/307 (46%), Gaps = 9/307 (2%)
Query: 182 NKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVV 241
N HRL +++ +F + V S +L+ ++ E A+ V EM P+
Sbjct: 113 NMSHRLFNALEDIQSPKFSIG--VFS--LLIMEFLEMGLFEEALWVSREM---KCSPDSK 165
Query: 242 SYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
+ +++ G R D ++ +G PD Y VL +QG K++D+M
Sbjct: 166 ACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEM 225
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
G++PN Y + I C+ K EA + E M + G +P+ ++D C+ GNV
Sbjct: 226 TSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNV 285
Query: 362 ERACEVWR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTL 419
+A +++ +L + V TL+ CK +++ AR++F + G +L YN L
Sbjct: 286 RQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCL 345
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
I G C+ G + EA L +M +P+ FTY +LING C E R+ ++M
Sbjct: 346 IHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 480 LPNKSTY 486
P+ +TY
Sbjct: 406 FPSSATY 412
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 129/270 (47%), Gaps = 2/270 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
+SP+V + IL+ LC ++V A R+ +M + P+ +Y +++ GY +M+ A
Sbjct: 369 NLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQA 428
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + E+ G P+ T++ L+DG+C + AA+ + +M G+ P+ VTY +I+A
Sbjct: 429 LDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+ K EA+ L DM+ G P+ +VD +EG + A + ++ + N
Sbjct: 489 HFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWN 548
Query: 380 TVAST-LIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWD 437
V T LI LC+ G +L A F + G + +Y +++ G + + + L
Sbjct: 549 HVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQC 608
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEG 467
DM++ G PN LL + G K
Sbjct: 609 DMIKTGILPNLLVNQLLARFYQANGYVKSA 638
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 122/442 (27%), Positives = 199/442 (45%), Gaps = 27/442 (6%)
Query: 64 SLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYR-AIFLKLSRARCFPEMESLLSTLPRH 122
SL S P LS F T SS H L + L L++ + F LL L +
Sbjct: 52 SLFSGYGGPSLSWSFF--IWTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLAQR 109
Query: 123 ----SP---QQFLDHCGEDP------LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSV 169
SP + + EDP + Y AG + ++ F +I S G++P +
Sbjct: 110 ELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRS-CGLKPHL 168
Query: 170 RXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLD 229
+ V+ + +FK + GV N+ N+L+ A K + E A ++L
Sbjct: 169 QACTVLLNSLVKQRLTDTVWKIFKK-MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLS 227
Query: 230 EMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQG 289
EM G+ P++ +Y T++ Y + A+ V + G AP+ TY + GF R+G
Sbjct: 228 EMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREG 287
Query: 290 RLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCC 349
R+ A ++ +++++ V N VTY +I+ YC+ EA+ L E M +G P
Sbjct: 288 RMREATRLFREIKDD-VTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYN 346
Query: 350 KVVDVLCEEGNVERACEVWRVLRKICGS----DNTVASTLIHWLCKKGKVLEARNVFEE- 404
++ LCE+G + A R+L ++ G DN +TLI+ CK ++ A V ++
Sbjct: 347 SILRKLCEDGRIREAN---RLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM 403
Query: 405 FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNA 464
E G + +Y LI G C+ EL A M+EKG +P TY+ L++GF
Sbjct: 404 IESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQ 463
Query: 465 KEGIRILEEMCENGCLPNKSTY 486
E ++LEE + G + + Y
Sbjct: 464 DEITKLLEEFEKRGLCADVALY 485
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 153/343 (44%), Gaps = 5/343 (1%)
Query: 146 AGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNV 205
+G P+ A + +E + G+ P + + H A SV ++ R GV+PN+
Sbjct: 216 SGDPEKAEKLLSEMEEK-GVFPDIFTYNTLISVYCKKSMHFEALSV-QDRMERSGVAPNI 273
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGE 265
V+ N + + + A R+ E+ + N V+YTT++ GY D+D A+R+
Sbjct: 274 VTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRLREV 332
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK 325
+ +G++P TY ++ C GR+ A +++ +M ++P+ +T +I AYCK +
Sbjct: 333 MESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIED 392
Query: 326 PGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVAST 384
AV + + M+ G ++ C+ +E A E ++ ++ K S
Sbjct: 393 MVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSW 452
Query: 385 LIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKG 443
L+ + K E + EEFE G A + Y LI +C+ ++ A L++ M +KG
Sbjct: 453 LVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKG 512
Query: 444 RAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ + + + + G E + + M + N Y
Sbjct: 513 LVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLY 555
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 113/234 (48%), Gaps = 2/234 (0%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I GY D ALR +ESR G P V ++ R R A+ +
Sbjct: 312 TLIDGYCRMNDIDEALRLREVMESR-GFSPGVVTYNSILRKLCEDGRIREANRLLTEMSG 370
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ + P+ ++CN L+ A CK+ ++ AV+V +M+ GL ++ SY ++ G+ +++
Sbjct: 371 K-KIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELE 429
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A L +++KG++P TY+ LVDGF Q + K++++ E+ G+ + Y +I
Sbjct: 430 NAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLI 489
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
CK ++ A L E M +KG V S + + G V A ++ V+
Sbjct: 490 RRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 206/481 (42%), Gaps = 55/481 (11%)
Query: 53 WPHRLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEM 112
WP L P LL+ ++ +Q +P +L++F A+ + H+ Y + L ++ EM
Sbjct: 6 WPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEM 65
Query: 113 ESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXX 172
+ ++ + S + C + + IR + AG+ + A+ F + + S+
Sbjct: 66 KYVIERMKEDSCE-----CKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFD 120
Query: 173 XXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEML 232
+++ H +F+ + V+ + + N+L+K LC+VN ++A +V EM
Sbjct: 121 TLLQEMVKESELEAACH-IFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMN 179
Query: 233 GMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL----DKGWAPDATTYTVLVDGFCRQ 288
G P+ SY +M G+ G ++ A +L + KG D Y +L+D C
Sbjct: 180 YQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDA 239
Query: 289 GRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVN-----LLEDMVR----- 338
G + AI+++ + G++ + Y IEA W+ E + L E ++R
Sbjct: 240 GEVDDAIEILGKILRKGLKAPKRCYH-HIEA-GHWESSSEGIERVKRLLTETLIRGAIPC 297
Query: 339 -----------------------------KGHVPSSGLCCKVVDVLCEEGNVERACEVW- 368
KG P+ + V LC G ++ A V
Sbjct: 298 LDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVIN 357
Query: 369 -RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF--EGGSVASLLTYNTLIAGLCE 425
+++ C V + LI LC GK +EA ++ + VA+ TY TL+ GLC
Sbjct: 358 KEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCR 417
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
G+ EA+++ ++M+ K P TY+++I G C + E + LEEM +P S
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSV 477
Query: 486 Y 486
+
Sbjct: 478 W 478
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 8/267 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G ++V ILL ALC EV+ A+ +L ++L GL Y + G+ W +G
Sbjct: 221 GSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH-WESSSEGI 279
Query: 260 MRV---LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
RV L E L +G P +Y+ + +G+LV +V+ M G +P YG
Sbjct: 280 ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAK 339
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGH-VPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-- 373
++A C+ K EAV+++ + +GH +P+ G+ ++ LC++G A + + K
Sbjct: 340 VKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQV 399
Query: 374 ICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGS-VASLLTYNTLIAGLCERGELCEA 432
C ++ TL+ LC+ G+ LEA V EE S + TY+ +I GLC+ EA
Sbjct: 400 SCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEA 459
Query: 433 ARLWDDMVEKGRAPNAFTYNLLINGFC 459
++MV + P + + L C
Sbjct: 460 VMWLEEMVSQDMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/481 (23%), Positives = 206/481 (42%), Gaps = 55/481 (11%)
Query: 53 WPHRLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEM 112
WP L P LL+ ++ +Q +P +L++F A+ + H+ Y + L ++ EM
Sbjct: 6 WPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEM 65
Query: 113 ESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXX 172
+ ++ + S + C + + IR + AG+ + A+ F + + S+
Sbjct: 66 KYVIERMKEDSCE-----CKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFD 120
Query: 173 XXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEML 232
+++ H +F+ + V+ + + N+L+K LC+VN ++A +V EM
Sbjct: 121 TLLQEMVKESELEAACH-IFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMN 179
Query: 233 GMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL----DKGWAPDATTYTVLVDGFCRQ 288
G P+ SY +M G+ G ++ A +L + KG D Y +L+D C
Sbjct: 180 YQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDA 239
Query: 289 GRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVN-----LLEDMVR----- 338
G + AI+++ + G++ + Y IEA W+ E + L E ++R
Sbjct: 240 GEVDDAIEILGKILRKGLKAPKRCYH-HIEA-GHWESSSEGIERVKRLLTETLIRGAIPC 297
Query: 339 -----------------------------KGHVPSSGLCCKVVDVLCEEGNVERACEVW- 368
KG P+ + V LC G ++ A V
Sbjct: 298 LDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVIN 357
Query: 369 -RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF--EGGSVASLLTYNTLIAGLCE 425
+++ C V + LI LC GK +EA ++ + VA+ TY TL+ GLC
Sbjct: 358 KEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCR 417
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
G+ EA+++ ++M+ K P TY+++I G C + E + LEEM +P S
Sbjct: 418 DGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSV 477
Query: 486 Y 486
+
Sbjct: 478 W 478
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 127/267 (47%), Gaps = 8/267 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G ++V ILL ALC EV+ A+ +L ++L GL Y + G+ W +G
Sbjct: 221 GSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGH-WESSSEGI 279
Query: 260 MRV---LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
RV L E L +G P +Y+ + +G+LV +V+ M G +P YG
Sbjct: 280 ERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAK 339
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGH-VPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-- 373
++A C+ K EAV+++ + +GH +P+ G+ ++ LC++G A + + K
Sbjct: 340 VKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQV 399
Query: 374 ICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGS-VASLLTYNTLIAGLCERGELCEA 432
C ++ TL+ LC+ G+ LEA V EE S + TY+ +I GLC+ EA
Sbjct: 400 SCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEA 459
Query: 433 ARLWDDMVEKGRAPNAFTYNLLINGFC 459
++MV + P + + L C
Sbjct: 460 VMWLEEMVSQDMVPESSVWKALAESVC 486
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 202/469 (43%), Gaps = 90/469 (19%)
Query: 57 LHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLL 116
L P + +++ Q D ++L+ F A R H P+ Y ++ LS+ + +L
Sbjct: 172 LKPSQVCAVLRSQDDERVALKFFYWADRQWRYR-HDPMVYYSMLEVLSKTKLCQGSRRVL 230
Query: 117 STLPRH----SPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXX 172
+ R +P+ F + Y AG+ AL+ ++
Sbjct: 231 VLMKRRGIYRTPEAF---------SRVMVSYSRAGQLRDALKVLTLMQ------------ 269
Query: 173 XXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEML 232
R GV PN++ CN + + N +E A+R L+ M
Sbjct: 270 -------------------------RAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQ 304
Query: 233 GMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLV 292
+G+VPNVV+Y ++ GY ++ A+ +L ++ KG PD +Y ++ C++ R+V
Sbjct: 305 VVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIV 364
Query: 293 AAIKVMDDM-EENGVQPNEVTYGVMI---------------------------------- 317
+M M +E+G+ P++VTY +I
Sbjct: 365 EVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAI 424
Query: 318 -EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLC-CKVVDVLCEEGNVERACEVWRVLRKIC 375
A CK + EA +L+ +M+ KGH P + VV+ C G V++A ++ +V+
Sbjct: 425 VHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHG 484
Query: 376 GSDNTVAST-LIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAA 433
NTV+ T L++ +C+ GK LEAR + E + + +TY+ ++ GL G+L EA
Sbjct: 485 HKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEAC 544
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
+ +MV KG P NLL+ C+ G E + +EE GC N
Sbjct: 545 DVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAIN 593
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 147/278 (52%), Gaps = 3/278 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVP-NVVSYTTVMGGYAWRGDMDG 258
G + + + ++ ALCK + A +++EML G P +VV+YT V+ G+ G++D
Sbjct: 413 GFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDK 472
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A ++L + G P+ +YT L++G CR G+ + A ++M+ EE+ PN +TY V++
Sbjct: 473 AKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMH 532
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGS 377
+ K EA +++ +MV KG P ++ LC +G A + L K C
Sbjct: 533 GLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 592
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLW 436
+ +T+IH C+ ++ A +V ++ + A + TY TL+ L ++G + EA L
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELM 652
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
M+ KG P TY +I+ +C++G + + ILE+M
Sbjct: 653 KKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 690
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 141/283 (49%), Gaps = 10/283 (3%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
+L+ L K + + RVL M G+ +++ VM Y+ G + A++VL + G
Sbjct: 213 MLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAG 272
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
P+ +D F R RL A++ ++ M+ G+ PN VTY MI YC + EA+
Sbjct: 273 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 332
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-----DNTVASTL 385
LLEDM KG +P ++ LC+E +R EV +++K+ D +TL
Sbjct: 333 ELLEDMHSKGCLPDKVSYYTIMGYLCKE---KRIVEVRDLMKKMAKEHGLVPDQVTYNTL 389
Query: 386 IHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
IH L K EA ++ E G L Y+ ++ LC+ G + EA L ++M+ KG
Sbjct: 390 IHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGH 449
Query: 445 A-PNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P+ TY ++NGFC++G + ++L+ M +G PN +Y
Sbjct: 450 CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSY 492
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 121/246 (49%), Gaps = 4/246 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P V N+LL++LC+ A + ++E L G NVV++TTV+ G+ ++D A
Sbjct: 554 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 613
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ VL ++ D TYT LVD ++GR+ A ++M M G+ P VTY +I
Sbjct: 614 LSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHR 673
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSD 378
YC+ K + V +LE M+ + + + +V++ LC G +E A + +VLR SD
Sbjct: 674 YCQMGKVDDLVAILEKMISRQKCRT--IYNQVIEKLCVLGKLEEADTLLGKVLRTASRSD 731
Query: 379 NTVASTLIHWLCKKGKVLEARNVF-EEFEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
L+ KKG L A V F + + L L +G++ EA +L
Sbjct: 732 AKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLML 791
Query: 438 DMVEKG 443
+VE+G
Sbjct: 792 RLVERG 797
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 125/286 (43%), Gaps = 6/286 (2%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
SPN ++ ++++ L + ++ A V+ EM+ G P V ++ G A +
Sbjct: 521 SPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARK 580
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
+ E L+KG A + +T ++ GFC+ L AA+ V+DDM + TY +++
Sbjct: 581 FMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLG 640
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKICGSDN 379
K + EA L++ M+ KG P+ V+ C+ G V+ + + R+ C
Sbjct: 641 KKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKC---R 697
Query: 380 TVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
T+ + +I LC GK+ EA + + S + T L+ G ++G A ++
Sbjct: 698 TIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACR 757
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
M + P+ L G E +++ + E G + +S
Sbjct: 758 MFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQS 803
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 174/358 (48%), Gaps = 7/358 (1%)
Query: 133 EDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVF 192
E T + G K + A+ FLR I PSV + +A S F
Sbjct: 187 EHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 193 KNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
+ + G+ P+V S NIL+ LC V + A+ + +M G+ P+ V+Y + G+
Sbjct: 246 -CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
G + GA V+ ++LDKG +PD TYT+L+ G C+ G + + ++ DM G + N +
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 313 -YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
VM+ CK + EA++L M G P V+ LC+ G + A ++ +
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 372 --RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGE 428
++I + T + L+ LC+KG +LEAR++ + G ++ YN +I G + G
Sbjct: 425 CDKRILPNSRTHGALLL-GLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ EA L+ ++E G P+ T+N LI G+CK N E +IL+ + G P+ +Y
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 151/295 (51%), Gaps = 9/295 (3%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ GV P+ V+ NIL K + + A V+ +ML GL P+V++YT ++ G G++D
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 258 GAMRVLGEVLDKGWAPDATT-YTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
+ +L ++L +G+ ++ +V++ G C+ GR+ A+ + + M+ +G+ P+ V Y ++
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG 376
I CK K A+ L ++M K +P+S ++ LC++G + E +L +
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML---LEARSLLDSLIS 461
Query: 377 SDNTVASTL----IHWLCKKGKVLEARNVFE-EFEGGSVASLLTYNTLIAGLCERGELCE 431
S T+ L I K G + EA +F+ E G S+ T+N+LI G C+ + E
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A ++ D + G AP+ +Y L++ + GN K + EM G P TY
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTY 576
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 143/298 (47%), Gaps = 16/298 (5%)
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
+++ C+++L LCK ++ A+ + ++M GL P++V+Y+ V+ G G D A+ +
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 264 GEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKW 323
E+ DK P++ T+ L+ G C++G L+ A ++D + +G + V Y ++I+ Y K
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 324 KKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAS 383
EA+ L + ++ G PS ++ C+ N+ A ++ V+ K+ G +V S
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI-KLYGLAPSVVS 540
Query: 384 --TLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCE--RGELCEAA---RL 435
TL+ G + E + + + +TY+ + GLC + E C R+
Sbjct: 541 YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Query: 436 WD-------DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ DM +G P+ TYN +I C+V + LE M + +TY
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 144/313 (46%), Gaps = 15/313 (4%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A S+F + G+SP++V+ +I++ LCK+ + ++A+ + DEM ++PN ++ ++
Sbjct: 382 ALSLFNQMKAD-GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G +G + A +L ++ G D Y +++DG+ + G + A+++ + E G+
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P+ T+ +I YCK + EA +L+ + G PS ++D GN + E+
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 368 WRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEE--FEG-----------GSVASL 413
R ++ + N S + LC+ K +V E FE G
Sbjct: 561 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQ 620
Query: 414 LTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEE 473
+TYNT+I LC L A + M + ++ TYN+LI+ C G ++ +
Sbjct: 621 ITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYS 680
Query: 474 MCENGCLPNKSTY 486
+ E +K Y
Sbjct: 681 LQEQNVSLSKFAY 693
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 45/273 (16%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++P+V + N L+ CK + A ++LD + GL P+VVSYTT+M YA G+
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCR-----------QGRLVAAIKV-MDDMEENGVQ 307
+ E+ +G P TY+V+ G CR + R+ K + DME G+
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P+++TY +I+ C+ K A LE M + SS ++D LC G + +A
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA--- 674
Query: 368 WRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERG 427
D+ + S L+ +NV S Y TLI C +G
Sbjct: 675 ----------DSFIYS------------LQEQNV--------SLSKFAYTTLIKAHCVKG 704
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCK 460
+ A +L+ ++ +G + Y+ +IN C+
Sbjct: 705 DPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 135/333 (40%), Gaps = 36/333 (10%)
Query: 98 AIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFL 157
A+ L L + E SLL +L S + LD + I GY +G + AL F
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLI--SSGETLDIVLYN---IVIDGYAKSGCIEEALELF- 491
Query: 158 RIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCK 217
++ GI PSV + + A + + +G++P+VVS L+ A
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL-YGLAPSVVSYTTLMDAYAN 550
Query: 218 VNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATT 277
+ + EM G+ P V+Y+ + G L +GW +
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKG-----------------LCRGWKHENCN 593
Query: 278 YTVLVDGF--CRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLED 335
+ + F C+QG + DME G+ P+++TY +I+ C+ K A LE
Sbjct: 594 HVLRERIFEKCKQG--------LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 336 MVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGK 394
M + SS ++D LC G + +A L++ S + A +TLI C KG
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 395 VLEARNVFEE-FEGGSVASLLTYNTLIAGLCER 426
A +F + G S+ Y+ +I LC R
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 366 EVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLC 424
++W V ++I + ST++ LC++ K+ +A E + S++++N++++G C
Sbjct: 174 KMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
+ G + A + +++ G P+ +++N+LING C VG+ E + + +M ++G P+
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 293
Query: 485 TY 486
TY
Sbjct: 294 TY 295
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 178/376 (47%), Gaps = 39/376 (10%)
Query: 148 KPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVS 207
K D A+ F + +R RP + + K++ L + K + G++ N+ +
Sbjct: 52 KEDDAVDLFQEM-TRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK-GIAHNLYT 109
Query: 208 CNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL 267
+I++ C+ ++ +A + +++ +G P+ V+++T++ G G + A+ ++ ++
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169
Query: 268 DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG 327
+ G P T LV+G C G++ A+ ++D M E G QPNEVTYG +++ CK +
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229
Query: 328 EAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR----------------VL 371
A+ LL M + + ++D LC++G+++ A ++ ++
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289
Query: 372 RKICGS--------------------DNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSV 410
R C + D S LI K+GK+ EA + +E + G
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349
Query: 411 ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRI 470
+TY +LI G C+ +L +A + D MV KG PN T+N+LING+CK +G+ +
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 471 LEEMCENGCLPNKSTY 486
+M G + + TY
Sbjct: 410 FRKMSLRGVVADTVTY 425
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 168/340 (49%), Gaps = 6/340 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSR- 196
T I G L G+ AL R+ +G +P++ N +++ +V R
Sbjct: 147 TLINGLCLEGRVSEALELVDRM-VEMGHKPTLITLNALVNGLCLN--GKVSDAVLLIDRM 203
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
G PN V+ +LK +CK + +A+ +L +M + + V Y+ ++ G G +
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
D A + E+ KG+ D YT L+ GFC GR K++ DM + + P+ V + +
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKIC 375
I+ + K K EA L ++M+++G P + ++D C+E +++A + ++ K C
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAAR 434
G + + LI+ CK + + +F + G VA +TYNTLI G CE G+L A
Sbjct: 384 GPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKE 443
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
L+ +MV + P+ +Y +L++G C G ++ + I E++
Sbjct: 444 LFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKI 483
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 152/287 (52%), Gaps = 2/287 (0%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
++P+VV+ + L+ K ++ A + EM+ G+ P+ V+YT+++ G+ +D A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+L ++ KG P+ T+ +L++G+C+ + +++ M GV + VTY +I+ +
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-DN 379
C+ K A L ++MV + P ++D LC+ G E+A E++ + K D
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+ + +IH +C KV +A ++F G + TYN +I GLC++G L EA L+
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
M E G +PN TYN+LI G+A + +++EE+ G + ST
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST 599
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 152/302 (50%), Gaps = 5/302 (1%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A ++F + G +++ L++ C + ++L +M+ + P+VV+++ ++
Sbjct: 266 AFNLFNEMEIK-GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALI 324
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
+ G + A + E++ +G +PD TYT L+DGFC++ +L A ++D M G
Sbjct: 325 DCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG 384
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
PN T+ ++I YCK + + L M +G V + ++ CE G +E A E+
Sbjct: 385 PNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Query: 368 WR--VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLC 424
++ V R++ D L+ LC G+ +A +FE+ E + + YN +I G+C
Sbjct: 445 FQEMVSRRV-RPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMC 503
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
++ +A L+ + KG P+ TYN++I G CK G+ E + +M E+G PN
Sbjct: 504 NASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGC 563
Query: 485 TY 486
TY
Sbjct: 564 TY 565
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 2/218 (0%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I GY A D L F ++ R G+ + + +A +F+ +R
Sbjct: 394 INGYCKANLIDDGLELFRKMSLR-GVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR- 451
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
V P++VS ILL LC E E A+ + +++ + ++ Y ++ G +D A
Sbjct: 452 RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA 511
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + KG PD TY +++ G C++G L A + MEE+G PN TY ++I A
Sbjct: 512 WDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA 571
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCE 357
+ ++ L+E++ R G + VVD+L +
Sbjct: 572 HLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSD 609
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/358 (29%), Positives = 174/358 (48%), Gaps = 7/358 (1%)
Query: 133 EDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVF 192
E T + G K + A+ FLR I PSV + +A S F
Sbjct: 187 EHTYSTVVDGLCRQQKLEDAV-LFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 193 KNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
+ + G+ P+V S NIL+ LC V + A+ + +M G+ P+ V+Y + G+
Sbjct: 246 -CTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHL 304
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
G + GA V+ ++LDKG +PD TYT+L+ G C+ G + + ++ DM G + N +
Sbjct: 305 LGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSII 364
Query: 313 -YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
VM+ CK + EA++L M G P V+ LC+ G + A ++ +
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEM 424
Query: 372 --RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGE 428
++I + T + L+ LC+KG +LEAR++ + G ++ YN +I G + G
Sbjct: 425 CDKRILPNSRTHGALLLG-LCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGC 483
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ EA L+ ++E G P+ T+N LI G+CK N E +IL+ + G P+ +Y
Sbjct: 484 IEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 151/295 (51%), Gaps = 9/295 (3%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ GV P+ V+ NIL K + + A V+ +ML GL P+V++YT ++ G G++D
Sbjct: 285 KHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNID 344
Query: 258 GAMRVLGEVLDKGWAPDATT-YTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
+ +L ++L +G+ ++ +V++ G C+ GR+ A+ + + M+ +G+ P+ V Y ++
Sbjct: 345 MGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIV 404
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG 376
I CK K A+ L ++M K +P+S ++ LC++G + E +L +
Sbjct: 405 IHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGML---LEARSLLDSLIS 461
Query: 377 SDNTVASTL----IHWLCKKGKVLEARNVFE-EFEGGSVASLLTYNTLIAGLCERGELCE 431
S T+ L I K G + EA +F+ E G S+ T+N+LI G C+ + E
Sbjct: 462 SGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAE 521
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A ++ D + G AP+ +Y L++ + GN K + EM G P TY
Sbjct: 522 ARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTY 576
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 143/298 (47%), Gaps = 16/298 (5%)
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
+++ C+++L LCK ++ A+ + ++M GL P++V+Y+ V+ G G D A+ +
Sbjct: 362 SIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLY 421
Query: 264 GEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKW 323
E+ DK P++ T+ L+ G C++G L+ A ++D + +G + V Y ++I+ Y K
Sbjct: 422 DEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKS 481
Query: 324 KKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAS 383
EA+ L + ++ G PS ++ C+ N+ A ++ V+ K+ G +V S
Sbjct: 482 GCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVI-KLYGLAPSVVS 540
Query: 384 --TLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCE--RGELCEAA---RL 435
TL+ G + E + + + +TY+ + GLC + E C R+
Sbjct: 541 YTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERI 600
Query: 436 WD-------DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ DM +G P+ TYN +I C+V + LE M + +TY
Sbjct: 601 FEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATY 658
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 147/314 (46%), Gaps = 17/314 (5%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A S+F + G+SP++V+ +I++ LCK+ + ++A+ + DEM ++PN ++ ++
Sbjct: 382 ALSLFNQMKAD-GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G +G + A +L ++ G D Y +++DG+ + G + A+++ + E G+
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P+ T+ +I YCK + EA +L+ + G PS ++D GN + E+
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDEL 560
Query: 368 WRVLR-KICGSDNTVASTLIHWLCKKGK------VLEARNVFEEFEGGSVA--------S 412
R ++ + N S + LC+ K VL R +FE+ + G
Sbjct: 561 RREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRER-IFEKCKQGLRDMESEGIPPD 619
Query: 413 LLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILE 472
+TYNT+I LC L A + M + ++ TYN+LI+ C G ++ +
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIY 679
Query: 473 EMCENGCLPNKSTY 486
+ E +K Y
Sbjct: 680 SLQEQNVSLSKFAY 693
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 45/273 (16%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++P+V + N L+ CK + A ++LD + GL P+VVSYTT+M YA G+
Sbjct: 498 GITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSI 557
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCR-----------QGRLVAAIKV-MDDMEENGVQ 307
+ E+ +G P TY+V+ G CR + R+ K + DME G+
Sbjct: 558 DELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIP 617
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P+++TY +I+ C+ K A LE M + SS ++D LC G + +A
Sbjct: 618 PDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKA--- 674
Query: 368 WRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERG 427
D+ + S L+ +NV S Y TLI C +G
Sbjct: 675 ----------DSFIYS------------LQEQNV--------SLSKFAYTTLIKAHCVKG 704
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCK 460
+ A +L+ ++ +G + Y+ +IN C+
Sbjct: 705 DPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 135/333 (40%), Gaps = 36/333 (10%)
Query: 98 AIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFL 157
A+ L L + E SLL +L S + LD + I GY +G + AL F
Sbjct: 438 ALLLGLCQKGMLLEARSLLDSLI--SSGETLDIVLYN---IVIDGYAKSGCIEEALELF- 491
Query: 158 RIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCK 217
++ GI PSV + + A + + +G++P+VVS L+ A
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL-YGLAPSVVSYTTLMDAYAN 550
Query: 218 VNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATT 277
+ + EM G+ P V+Y+ + G L +GW +
Sbjct: 551 CGNTKSIDELRREMKAEGIPPTNVTYSVIFKG-----------------LCRGWKHENCN 593
Query: 278 YTVLVDGF--CRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLED 335
+ + F C+QG + DME G+ P+++TY +I+ C+ K A LE
Sbjct: 594 HVLRERIFEKCKQG--------LRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEI 645
Query: 336 MVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGK 394
M + SS ++D LC G + +A L++ S + A +TLI C KG
Sbjct: 646 MKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGD 705
Query: 395 VLEARNVFEE-FEGGSVASLLTYNTLIAGLCER 426
A +F + G S+ Y+ +I LC R
Sbjct: 706 PEMAVKLFHQLLHRGFNVSIRDYSAVINRLCRR 738
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 366 EVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLC 424
++W V ++I + ST++ LC++ K+ +A E + S++++N++++G C
Sbjct: 174 KMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 233
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
+ G + A + +++ G P+ +++N+LING C VG+ E + + +M ++G P+
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSV 293
Query: 485 TY 486
TY
Sbjct: 294 TY 295
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 152/286 (53%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P++V + LL A+ K+N+ E + + + +G+ ++ S+TT++ + + A+
Sbjct: 77 PSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSC 136
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG+++ G+ P T+ LV+GFC R A+ ++D + G +PN V Y +I++ C+
Sbjct: 137 LGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCE 196
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSDNTV 381
+ A+++L+ M + G P ++ L G + + ++R D
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMV 440
S LI K+G++LEA+ + E SV +++TYN+LI GLC G L EA ++ + +V
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
KG PNA TYN LING+CK +G++IL M +G + TY
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTY 362
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 176/397 (44%), Gaps = 5/397 (1%)
Query: 92 HPLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDS 151
HPLP F +L A + +L RH + H T I + +
Sbjct: 74 HPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISH-DLYSFTTLIDCFCRCARLSL 132
Query: 152 ALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNIL 211
AL ++ +LG PS+ R A S+ + G PNVV N +
Sbjct: 133 ALSCLGKM-MKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV-DQIVGLGYEPNVVIYNTI 190
Query: 212 LKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGW 271
+ +LC+ +V A+ VL M MG+ P+VV+Y +++ G + R+L +++ G
Sbjct: 191 IDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGI 250
Query: 272 APDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVN 331
+PD T++ L+D + ++G+L+ A K ++M + V PN VTY +I C EA
Sbjct: 251 SPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKK 310
Query: 332 LLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSDNTVASTLIHWLC 390
+L +V KG P++ +++ C+ V+ ++ V+ R D +TL C
Sbjct: 311 VLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYC 370
Query: 391 KKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAF 449
+ GK A V V + T+N L+ GLC+ G++ +A +D+ +
Sbjct: 371 QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGII 430
Query: 450 TYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
TYN++I G CK ++ + + G P+ TY
Sbjct: 431 TYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 157/325 (48%), Gaps = 6/325 (1%)
Query: 163 LGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVE 222
LG P+V + + A V K+ + + G+ P+VV+ N L+ L
Sbjct: 178 LGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMK-KMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 223 VAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLV 282
V+ R+L +M+ MG+ P+V++++ ++ Y G + A + E++ + P+ TY L+
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 283 DGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHV 342
+G C G L A KV++ + G PN VTY +I YCK K+ + + +L M R G
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVD 356
Query: 343 PSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS--DNTVASTLIHWLCKKGKVLEARN 400
+ + C+ G A +V + CG D + L+ LC GK+ +A
Sbjct: 357 GDTFTYNTLYQGYCQAGKFSAAEKVLGRMVS-CGVHPDMYTFNILLDGLCDHGKIGKALV 415
Query: 401 VFEEFEGG-SVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFC 459
E+ + +V ++TYN +I GLC+ ++ +A L+ + KG +P+ TY ++ G
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475
Query: 460 KVGNAKEGIRILEEMC-ENGCLPNK 483
+ +E + +M E+G +P K
Sbjct: 476 RKRLWREAHELYRKMQKEDGLMPIK 500
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 146/289 (50%), Gaps = 8/289 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++P V++ N L+ LC V A ++++M+G GL +VV+Y T++ G GD A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ +L ++ + PD Y+ ++D C+ G A + +M E G+ PN TY MI+
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV---ERACEVWRVLRKICG 376
+C + + +A LL DM+ + P ++ +EG + E+ C+ +L +
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD--EMLHRCIF 398
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLW 436
D +++I+ CK + +A+++F+ V +T+NT+I C + E +L
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV---VTFNTIIDVYCRAKRVDEGMQLL 455
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
++ +G N TYN LI+GFC+V N + +EM +G P+ T
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 181/379 (47%), Gaps = 37/379 (9%)
Query: 135 PLVTAIRGYGLAG------KPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLA 188
P TA+ + G +PD A+ + ++E R R + H+L+
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR---RIPLNIYSFNILIKCFCDCHKLS 158
Query: 189 HSVFKNSR-TRFGVSPNVVSCNILLKALC---KVNE--------VEV----AVRVLDEML 232
S+ + T+ G P+VV+ N LL LC +++E VE AV + D+M+
Sbjct: 159 FSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMV 218
Query: 233 GMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLV 292
+GL P V+++ T++ G G + A ++ +++ KG D TY +V+G C+ G
Sbjct: 219 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 278
Query: 293 AAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVV 352
+A+ ++ MEE ++P+ V Y +I+ CK +A L +M+ KG P+ ++
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 353 DVLCEEGNVERACEVWRVLRKI----CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGG 408
D C G R + R+LR + D + LI K+GK+ EA + +E
Sbjct: 339 DGFCSFG---RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 409 SVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEG 467
+ +TYN++I G C+ +A ++D M +P+ T+N +I+ +C+ EG
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG 451
Query: 468 IRILEEMCENGCLPNKSTY 486
+++L E+ G + N +TY
Sbjct: 452 MQLLREISRRGLVANTTTY 470
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 182/388 (46%), Gaps = 11/388 (2%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T + G G SAL ++E I+P V ++ H A +F
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEET-HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G++PNV + N ++ C A R+L +M+ + P+V+++ ++ G +
Sbjct: 325 K-GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ E+L + PD TY ++ GFC+ R A + D M P+ VT+ +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTII 439
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKIC 375
+ YC+ K+ E + LL ++ R+G V ++ ++ CE N+ A ++++ + +C
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAAR 434
D + L++ C+ K+ EA +FE + + + YN +I G+C+ ++ EA
Sbjct: 500 -PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXX 494
L+ + G P+ TYN++I+GFC + + +M +NG P+ STY
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 495 XXXXMNQEINKVVALAMSTGVDGELWDL 522
+++ I ++++ S G G+ + +
Sbjct: 619 KAGEIDKSI-ELISEMRSNGFSGDAFTI 645
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 138/291 (47%), Gaps = 41/291 (14%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
++P+V++ N L+ A K ++ A ++ DEML + P+ V+Y +++ G+ D A
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA- 420
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+ D +PD T+ ++D +CR R+ ++++ ++ G+ N TY +I +
Sbjct: 421 ---KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
C+ A +L ++M+ G P + C ++ CE +E A E++ V++ +T
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537
Query: 381 VA-STLIHWLCKKGKVLEARNVF-------------------EEFEGGSV---ASLL--- 414
VA + +IH +CK KV EA ++F F G S A++L
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 415 -----------TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLL 454
TYNTLI G + GE+ ++ L +M G + +AFT ++
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV 648
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 146/289 (50%), Gaps = 8/289 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++P V++ N L+ LC V A ++++M+G GL +VV+Y T++ G GD A
Sbjct: 221 GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSA 280
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ +L ++ + PD Y+ ++D C+ G A + +M E G+ PN TY MI+
Sbjct: 281 LNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG 340
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV---ERACEVWRVLRKICG 376
+C + + +A LL DM+ + P ++ +EG + E+ C+ +L +
Sbjct: 341 FCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCD--EMLHRCIF 398
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLW 436
D +++I+ CK + +A+++F+ V +T+NT+I C + E +L
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDV---VTFNTIIDVYCRAKRVDEGMQLL 455
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
++ +G N TYN LI+GFC+V N + +EM +G P+ T
Sbjct: 456 REISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 182/388 (46%), Gaps = 11/388 (2%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T + G G SAL ++E I+P V ++ H A +F
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEET-HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G++PNV + N ++ C A R+L +M+ + P+V+++ ++ G +
Sbjct: 325 K-GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 383
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ E+L + PD TY ++ GFC+ R A + D M P+ VT+ +I
Sbjct: 384 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTII 439
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKIC 375
+ YC+ K+ E + LL ++ R+G V ++ ++ CE N+ A ++++ + +C
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAAR 434
D + L++ C+ K+ EA +FE + + + YN +I G+C+ ++ EA
Sbjct: 500 -PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXX 494
L+ + G P+ TYN++I+GFC + + +M +NG P+ STY
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 495 XXXXMNQEINKVVALAMSTGVDGELWDL 522
+++ I ++++ S G G+ + +
Sbjct: 619 KAGEIDKSI-ELISEMRSNGFSGDAFTI 645
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 181/379 (47%), Gaps = 37/379 (9%)
Query: 135 PLVTAIRGYGLAG------KPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLA 188
P TA+ + G +PD A+ + ++E R R + H+L+
Sbjct: 102 PFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR---RIPLNIYSFNILIKCFCDCHKLS 158
Query: 189 HSVFKNSR-TRFGVSPNVVSCNILLKALC---KVNE--------VEV----AVRVLDEML 232
S+ + T+ G P+VV+ N LL LC +++E VE AV + D+M+
Sbjct: 159 FSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMV 218
Query: 233 GMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLV 292
+GL P V+++ T++ G G + A ++ +++ KG D TY +V+G C+ G
Sbjct: 219 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 278
Query: 293 AAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVV 352
+A+ ++ MEE ++P+ V Y +I+ CK +A L +M+ KG P+ ++
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMI 338
Query: 353 DVLCEEGNVERACEVWRVLRKI----CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGG 408
D C G R + R+LR + D + LI K+GK+ EA + +E
Sbjct: 339 DGFCSFG---RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 395
Query: 409 SVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEG 467
+ +TYN++I G C+ +A ++D M +P+ T+N +I+ +C+ EG
Sbjct: 396 CIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEG 451
Query: 468 IRILEEMCENGCLPNKSTY 486
+++L E+ G + N +TY
Sbjct: 452 MQLLREISRRGLVANTTTY 470
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 147/318 (46%), Gaps = 49/318 (15%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
++P+V++ N L+ A K ++ A ++ DEML + P+ V+Y +++ G+ D A
Sbjct: 362 INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA- 420
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+ D +PD T+ ++D +CR R+ ++++ ++ G+ N TY +I +
Sbjct: 421 ---KHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 477
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
C+ A +L ++M+ G P + C ++ CE +E A E++ V++ +T
Sbjct: 478 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 537
Query: 381 VA-STLIHWLCKKGKVLEARNVF-------------------EEFEGGSV---ASLL--- 414
VA + +IH +CK KV EA ++F F G S A++L
Sbjct: 538 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 597
Query: 415 -----------TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGN 463
TYNTLI G + GE+ ++ L +M G + +AFT + C+V +
Sbjct: 598 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSD 657
Query: 464 AKEGIRILEEMCENGCLP 481
EE+ EN P
Sbjct: 658 --------EEIIENYLRP 667
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 150/289 (51%), Gaps = 2/289 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P+VV+ IL+ ALCK A LD M G++PN+ +Y T++ G +D A
Sbjct: 358 GHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDA 417
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + G + G P A TY V +D + + G V+A++ + M+ G+ PN V + +
Sbjct: 418 LELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYS 477
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSD 378
K + EA + + G VP S ++ + G ++ A ++ ++ C D
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWD 437
V ++LI+ L K +V EA +F + + +++TYNTL+AGL + G++ EA L++
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFE 597
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
MV+KG PN T+N L + CK +++L +M + GC+P+ TY
Sbjct: 598 GMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTY 646
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/360 (27%), Positives = 170/360 (47%), Gaps = 7/360 (1%)
Query: 132 GEDPLVTAIRGYGLAGKPDSALRT-FLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHS 190
G+ LV IR Y S RT F + LG++P + ++ +A
Sbjct: 748 GDSILVPIIR-YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQD 806
Query: 191 VFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY 250
VF ++ G P+V + N LL A K +++ + EM N +++ V+ G
Sbjct: 807 VFLQVKST-GCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL 865
Query: 251 AWRGDMDGAMRVLGEVL-DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
G++D A+ + +++ D+ ++P A TY L+DG + GRL A ++ + M + G +PN
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPN 925
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
Y ++I + K + A L + MV++G P +VD LC G V+ ++
Sbjct: 926 CAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFK 985
Query: 370 VLRKICGSDNTVASTL-IHWLCKKGKVLEARNVFEEFEG--GSVASLLTYNTLIAGLCER 426
L++ + + V L I+ L K ++ EA +F E + G L TYN+LI L
Sbjct: 986 ELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIA 1045
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G + EA ++++++ G PN FT+N LI G+ G + + + M G PN TY
Sbjct: 1046 GMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTY 1105
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 173/380 (45%), Gaps = 9/380 (2%)
Query: 107 RCFPEMESLLSTLPRHSPQQFLDHCGE--DPLVTAIRGYGLAGKPDSALRTFLRIESRLG 164
+ FP+ +S S + L H E + ++ A+R + GK + F ++ R+
Sbjct: 93 KSFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALR---VDGKLEEMAYVFDLMQKRII 149
Query: 165 IRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVA 224
R + V+ + +++ K FG N S N L+ L K A
Sbjct: 150 KRDTNTYLTIFKSLSVKGGLKQAPYALRK--MREFGFVLNAYSYNGLIHLLLKSRFCTEA 207
Query: 225 VRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDG 284
+ V M+ G P++ +Y+++M G R D+D M +L E+ G P+ T+T+ +
Sbjct: 208 MEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267
Query: 285 FCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS 344
R G++ A +++ M++ G P+ VTY V+I+A C +K A + E M H P
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 345 SGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAST-LIHWLCKKGKVLEARNVFE 403
++D + +++ + W + K + V T L+ LCK G EA + +
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 404 EF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
+ G + +L TYNTLI GL L +A L+ +M G P A+TY + I+ + K G
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG 447
Query: 463 NAKEGIRILEEMCENGCLPN 482
++ + E+M G PN
Sbjct: 448 DSVSALETFEKMKTKGIAPN 467
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 149/320 (46%), Gaps = 37/320 (11%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P++ + + L+ L K +++ + +L EM +GL PNV ++T + G ++ A
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+L + D+G PD TYTVL+D C +L A +V + M+ +P+ VTY +++
Sbjct: 278 YEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR 337
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK------ 373
+ + +M + GHVP +VD LC+ GN A + V+R
Sbjct: 338 FSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 374 -------ICG------SDNTV--------------AST---LIHWLCKKGKVLEARNVFE 403
ICG D+ + A T I + K G + A FE
Sbjct: 398 LHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFE 457
Query: 404 EFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
+ + +A +++ N + L + G EA +++ + + G P++ TYN+++ + KVG
Sbjct: 458 KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVG 517
Query: 463 NAKEGIRILEEMCENGCLPN 482
E I++L EM ENGC P+
Sbjct: 518 EIDEAIKLLSEMMENGCEPD 537
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 164/338 (48%), Gaps = 25/338 (7%)
Query: 150 DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCN 209
D AL F +ES LG++P+ ++ A F+ +T+ G++PN+V+CN
Sbjct: 415 DDALELFGNMES-LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK-GIAPNIVACN 472
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
L +L K A ++ + +GLVP+ V+Y +M Y+ G++D A+++L E+++
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G PD L++ + R+ A K+ M+E ++P VTY ++ K K EA
Sbjct: 533 GCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEA 592
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHW 388
+ L E MV+KG P++ + D LC+ V A + +++++ C D +T+I
Sbjct: 593 IELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFG 652
Query: 389 LCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARL------------- 435
L K G+V EA F + + +T TL+ G+ + + +A ++
Sbjct: 653 LVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPA 712
Query: 436 ---WDDMV----EKGRAPNA--FTYNLLINGFCKVGNA 464
W+D++ + NA F+ L+ NG C+ G++
Sbjct: 713 NLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDS 750
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 106/453 (23%), Positives = 181/453 (39%), Gaps = 90/453 (19%)
Query: 109 FPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPS 168
F MESL ++ F+D+ YG +G SAL TF +++++ GI P+
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDY------------YGKSGDSVSALETFEKMKTK-GIAPN 467
Query: 169 VRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVL 228
+ + R R A +F + G+ P+ V+ N+++K KV E++ A+++L
Sbjct: 468 IVACNASLYSLAKAGRDREAKQIFYGLKD-IGLVPDSVTYNMMMKCYSKVGEIDEAIKLL 526
Query: 229 DEMLG-----------------------------------MGLVPNVVSYTTVMGGYAWR 253
EM+ M L P VV+Y T++ G
Sbjct: 527 SEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKN 586
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
G + A+ + ++ KG P+ T+ L D C+ + A+K++ M + G P+ TY
Sbjct: 587 GKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTY 646
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV------ 367
+I K + EA+ M +K P C ++ + + +E A ++
Sbjct: 647 NTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLY 705
Query: 368 ----------WR----------------------VLRKICGSDNTVASTLIHWLCKKGKV 395
W V IC +++ +I + CK V
Sbjct: 706 NCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNV 765
Query: 396 LEARNVFEEF--EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNL 453
AR +FE+F + G L TYN LI GL E + A ++ + G P+ TYN
Sbjct: 766 SGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNF 825
Query: 454 LINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L++ + K G E + +EM + C N T+
Sbjct: 826 LLDAYGKSGKIDELFELYKEMSTHECEANTITH 858
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 135/301 (44%), Gaps = 2/301 (0%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
+ S FK+ + +CN +L+AL ++E V D M + + +Y T+
Sbjct: 101 SFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIF 160
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
+ +G + A L ++ + G+ +A +Y L+ + A++V M G +
Sbjct: 161 KSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFR 220
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P+ TY ++ K + + LL++M G P+ + VL G + A E+
Sbjct: 221 PSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 368 W-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGS-VASLLTYNTLIAGLCE 425
R+ + CG D + LI LC K+ A+ VFE+ + G +TY TL+ +
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+L + W +M + G P+ T+ +L++ CK GN E L+ M + G LPN T
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT 400
Query: 486 Y 486
Y
Sbjct: 401 Y 401
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
SP + L+ L K + A ++ + ML G PN Y ++ G+ G+ D A
Sbjct: 888 SPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACA 947
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
+ ++ +G PD TY+VLVD C GR+ + +++E+G+ P+ V Y ++I
Sbjct: 948 LFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLG 1007
Query: 322 KWKKPGEAVNLLEDM-VRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
K + EA+ L +M +G P D
Sbjct: 1008 KSHRLEEALVLFNEMKTSRGITP----------------------------------DLY 1033
Query: 381 VASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDM 439
++LI L G V EA ++ E + G ++ T+N LI G G+ A ++ M
Sbjct: 1034 TYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTM 1093
Query: 440 VEKGRAPNAFTYNLLIN 456
V G +PN TY L N
Sbjct: 1094 VTGGFSPNTGTYEQLPN 1110
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 145 LAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPN 204
+ G+ D L F ++ G+ P V ++ R A +F +T G++P+
Sbjct: 973 MVGRVDEGLHYFKELKES-GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031
Query: 205 VVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLG 264
+ + N L+ L VE A ++ +E+ GL PNV ++ ++ GY+ G + A V
Sbjct: 1032 LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Query: 265 EVLDKGWAPDATTYTVL 281
++ G++P+ TY L
Sbjct: 1092 TMVTGGFSPNTGTYEQL 1108
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 163/330 (49%), Gaps = 23/330 (6%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGM-GLVPNVVSYTTVMGGYAWRGDMDG 258
GV N V+ NI LK LCK + E R + E++ M G P++V+Y T++ Y GD+ G
Sbjct: 375 GVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSG 434
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+ ++ E+ KG + T ++D C++ +L A +++ + G +EVTYG +I
Sbjct: 435 ALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIM 494
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK--ICG 376
+ + +K +A+ + ++M + P+ ++ LC G E A E + L + +
Sbjct: 495 GFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLP 554
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARL 435
D+T S ++ + CK+G+V +A + E S T N L+ GLC+ G +A
Sbjct: 555 DDSTFNSIILGY-CKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNF 613
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXX 495
++ ++E+ R + TYN +I+ FCK KE +L EM E G P++ TY
Sbjct: 614 FNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTY--------- 663
Query: 496 XXXMNQEINKVVALAMSTGVDGELWDLLVK 525
N ++L M G E +LL K
Sbjct: 664 --------NSFISLLMEDGKLSETDELLKK 685
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 169/351 (48%), Gaps = 6/351 (1%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAH-SVFKNSRTR 198
+ GY L GK + AL R+ S + P +K+ RL+ +
Sbjct: 211 VNGYCLEGKLEDALGMLERMVSEFKVNPD--NVTYNTILKAMSKKGRLSDLKELLLDMKK 268
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G+ PN V+ N L+ CK+ ++ A ++++ M ++P++ +Y ++ G G M
Sbjct: 269 NGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMRE 328
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
+ ++ + PD TY L+DG G + A K+M+ ME +GV+ N+VT+ + ++
Sbjct: 329 GLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLK 388
Query: 319 AYCKWKKPGEAVNLLEDMVR-KGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
CK +K ++++V G P ++ + G++ A E+ R + +
Sbjct: 389 WLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIK 448
Query: 378 DNTVA-STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARL 435
NT+ +T++ LCK+ K+ EA N+ + G + +TY TLI G ++ +A +
Sbjct: 449 MNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEM 508
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
WD+M + P T+N LI G C G + + +E+ E+G LP+ ST+
Sbjct: 509 WDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTF 559
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 138/276 (50%), Gaps = 1/276 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G SP++V+ + L+KA KV ++ A+ ++ EM G+ N ++ T++ +D A
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEA 470
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+L +G+ D TY L+ GF R+ ++ A+++ D+M++ + P T+ +I
Sbjct: 471 HNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGG 530
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSD 378
C K A+ +++ G +P ++ C+EG VE+A E + ++ D
Sbjct: 531 LCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPD 590
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
N + L++ LCK+G +A N F +TYNT+I+ C+ +L EA L +
Sbjct: 591 NYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSE 650
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
M EKG P+ FTYN I+ + G E +L++
Sbjct: 651 MEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 150/315 (47%), Gaps = 38/315 (12%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRG----- 254
V P++ + NIL+ LC + + ++D M + L P+VV+Y T++ G G
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 255 -------DMDGA-----------------------MRVLGEVLD-KGWAPDATTYTVLVD 283
+ DG R + E++D G++PD TY L+
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVP 343
+ + G L A+++M +M + G++ N +T +++A CK +K EA NLL ++G +
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 344 SSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN-TVASTLIHWLCKKGKVLEARNVF 402
++ E VE+A E+W ++K+ + + ++LI LC GK A F
Sbjct: 485 DEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKF 544
Query: 403 EEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKV 461
+E E G + T+N++I G C+ G + +A +++ ++ P+ +T N+L+NG CK
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604
Query: 462 GNAKEGIRILEEMCE 476
G ++ + + E
Sbjct: 605 GMTEKALNFFNTLIE 619
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 149/295 (50%), Gaps = 7/295 (2%)
Query: 198 RFGVSPNVVSCNILLKALCKV---NEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRG 254
R + PN+++CN LL L + + A V D+M+ +G+ NV ++ ++ GY G
Sbjct: 159 RLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEG 218
Query: 255 DMDGAMRVLGEVLDKGWA-PDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
++ A+ +L ++ + PD TY ++ ++GRL +++ DM++NG+ PN VTY
Sbjct: 219 KLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTY 278
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
++ YCK EA ++E M + +P +++ LC G++ E+ ++
Sbjct: 279 NNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKS 338
Query: 374 I-CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCE 431
+ D +TLI + G LEAR + E+ E V A+ +T+N + LC+ +
Sbjct: 339 LKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREA 398
Query: 432 AARLWDDMVE-KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
R ++V+ G +P+ TY+ LI + KVG+ + ++ EM + G N T
Sbjct: 399 VTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTIT 453
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 135/294 (45%), Gaps = 24/294 (8%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ N ++ N +L ALCK +++ A +L+ G + + V+Y T++ G+ ++ A
Sbjct: 446 GIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKA 505
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + E+ P +T+ L+ G C G+ A++ D++ E+G+ P++ T+ +I
Sbjct: 506 LEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILG 565
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
YCK + +A + ++ P + C +++ LC+EG E+A + L + D
Sbjct: 566 YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDT 625
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLW-- 436
+T+I CK K+ EA ++ E E G TYN+ I+ L E G+L E L
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK 685
Query: 437 ----------DDMVEKGRAP-----------NAFTYNLLINGFCKVGNAKEGIR 469
D VE + P A Y+ +I+ C G KE R
Sbjct: 686 FSGKFGSMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHSR 739
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 122/255 (47%), Gaps = 6/255 (2%)
Query: 238 PNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCR---QGRLVAA 294
P+ + + Y G A+++ +++ P+ T L+ G R + +A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 295 IKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHV-PSSGLCCKVVD 353
+V DDM + GV N T+ V++ YC K +A+ +LE MV + V P + ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 354 VLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSV-A 411
+ ++G + E+ ++K N V + L++ CK G + EA + E + +V
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 412 SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRIL 471
L TYN LI GLC G + E L D M P+ TYN LI+G ++G + E +++
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 472 EEMCENGCLPNKSTY 486
E+M +G N+ T+
Sbjct: 369 EQMENDGVKANQVTH 383
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 134/266 (50%), Gaps = 2/266 (0%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
++ LCK+ + E A+ +L +M + +VV Y ++ G A + E+ DKG
Sbjct: 47 IINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKG 106
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
PD TY+ ++D FCR GR A +++ DM E + P+ VT+ +I A K K EA
Sbjct: 107 IFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAE 166
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSDNTVASTLIHWL 389
+ DM+R+G P++ ++D C++ + A + + K C D STLI+
Sbjct: 167 EIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGY 226
Query: 390 CKKGKVLEARNVF-EEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
CK +V +F E G VA+ +TY TLI G C+ G+L A L + M+ G APN
Sbjct: 227 CKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNY 286
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEM 474
T+ ++ C ++ ILE++
Sbjct: 287 ITFQSMLASLCSKKELRKAFAILEDL 312
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 132/258 (51%), Gaps = 6/258 (2%)
Query: 231 MLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGR 290
M+ G P+VV++TT+M G G + A+ ++ ++++G P Y +++G C+ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 291 LVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCK 350
+A+ ++ MEE ++ + V Y +I+ CK A NL +M KG P
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 351 VVDVLCEEGNVERACEVWR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGG 408
++D C G A ++ R ++ + D S LI+ L K+GKV EA ++ + G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 409 SVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGI 468
+ +TYN++I G C++ L +A R+ D M K +P+ T++ LING+CK G+
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGM 236
Query: 469 RILEEMCENGCLPNKSTY 486
I EM G + N TY
Sbjct: 237 EIFCEMHRRGIVANTVTY 254
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 144/289 (49%), Gaps = 6/289 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P+VV+ L+ LC V A+ ++D M+ G P Y T++ G GD + A
Sbjct: 5 GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ +L ++ + Y ++D C+ G + A + +M + G+ P+ +TY MI++
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSD 378
+C+ + +A LL DM+ + P +++ L +EG V A E++ +LR+
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWD 437
+++I CK+ ++ +A+ + + S + ++T++TLI G C+ + ++
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M +G N TY LI+GFC+VG+ +L M +G PN T+
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITF 289
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 39/310 (12%)
Query: 132 GEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSV 191
G P T I G G +SAL ++E I+ V ++ H A ++
Sbjct: 40 GHQPYGTIINGLCKMGDTESALNLLSKME-ETHIKAHVVIYNAIIDRLCKDGHHIHAQNL 98
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F + G+ P+V++ + ++ + C+ A ++L +M+ + P+VV+++ ++
Sbjct: 99 FTEMHDK-GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALV 157
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
G + A + G++L +G P TY ++DGFC+Q RL A +++D M P+ V
Sbjct: 158 KEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVV 217
Query: 312 TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
T+ +I YCK K+ + + +M R+G V
Sbjct: 218 TFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA---------------------------- 249
Query: 372 RKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGEL 429
NTV +TLIH C+ G + A+++ VA + +T+ +++A LC + EL
Sbjct: 250 -------NTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 430 CEAARLWDDM 439
+A + +D+
Sbjct: 303 RKAFAILEDL 312
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 104/210 (49%), Gaps = 1/210 (0%)
Query: 164 GIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEV 223
GI P V ++ R A + ++ R ++P+VV+ + L+ AL K +V
Sbjct: 106 GIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIER-QINPDVVTFSALINALVKEGKVSE 164
Query: 224 AVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVD 283
A + +ML G+ P ++Y +++ G+ + ++ A R+L + K +PD T++ L++
Sbjct: 165 AEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLIN 224
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVP 343
G+C+ R+ +++ +M G+ N VTY +I +C+ A +LL M+ G P
Sbjct: 225 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAP 284
Query: 344 SSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
+ ++ LC + + +A + L+K
Sbjct: 285 NYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 59/103 (57%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
SP+VV+ + L+ CK V+ + + EM G+V N V+YTT++ G+ GD+D A
Sbjct: 213 SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQD 272
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN 304
+L ++ G AP+ T+ ++ C + L A +++D++++
Sbjct: 273 LLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKS 315
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/391 (27%), Positives = 174/391 (44%), Gaps = 21/391 (5%)
Query: 42 ESYTIQPPIKPWPHRLHPKLLASLISR--QHDPHLSLQIFRHAQTHHRASSHHPLPYRAI 99
+ + + PW P L+ S++ R H P +LQ F HHR H +
Sbjct: 43 DQFLLSTKTTPWT----PNLVNSVLKRLWNHGPK-ALQFFHFLDNHHREYVHDASSFDLA 97
Query: 100 FLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRG--YGLAGKPDSALRTFL 157
+R P + SL+ H + G P AI Y AGKPD A++ FL
Sbjct: 98 IDIAARLHLHPTVWSLI-----HRMRSL--RIGPSPKTFAIVAERYASAGKPDKAVKLFL 150
Query: 158 RIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCK 217
+ G + ++KR A+ +F+ R RF V + V+ N++L C
Sbjct: 151 NMHEH-GCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSV--DTVTYNVILNGWCL 207
Query: 218 VNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATT 277
+ A+ VL EM+ G+ PN+ +Y T++ G+ G + A E+ + D T
Sbjct: 208 IKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVT 267
Query: 278 YTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMV 337
YT +V GF G + A V D+M GV P+ TY MI+ CK AV + E+MV
Sbjct: 268 YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 338 RKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVL 396
R+G+ P+ ++ L G R E+ R+ + C + + +I + + +V
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVE 387
Query: 397 EARNVFEEFEGGS-VASLLTYNTLIAGLCER 426
+A +FE+ G + +L TYN LI+G+ R
Sbjct: 388 KALGLFEKMGSGDCLPNLDTYNILISGMFVR 418
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 130/262 (49%), Gaps = 3/262 (1%)
Query: 227 VLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFC 286
++ M + + P+ ++ V YA G D A+++ + + G D ++ ++D C
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 287 RQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSG 346
+ R+ A ++ + + VTY V++ +C K+ +A+ +L++MV +G P+
Sbjct: 173 KSKRVEKAYELFRALR-GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLT 231
Query: 347 LCCKVVDVLCEEGNVERACEVWRVLRK-ICGSDNTVASTLIHWLCKKGKVLEARNVFEEF 405
++ G + A E + ++K C D +T++H G++ ARNVF+E
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 406 -EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNA 464
G + S+ TYN +I LC++ + A ++++MV +G PN TYN+LI G G
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 465 KEGIRILEEMCENGCLPNKSTY 486
G +++ M GC PN TY
Sbjct: 352 SRGEELMQRMENEGCEPNFQTY 373
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 93/204 (45%), Gaps = 9/204 (4%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T ++G+ AG+ A FL ++ R V V + R A +VF +
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKR-ARNVF-DEMI 292
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R GV P+V + N +++ LCK + VE AV + +EM+ G PNV +Y ++ G G+
Sbjct: 293 REGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFS 352
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
++ + ++G P+ TY +++ + + A+ + + M PN TY ++I
Sbjct: 353 RGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILI 412
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGH 341
K+ EDMV G+
Sbjct: 413 SGMFVRKRS-------EDMVVAGN 429
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/279 (31%), Positives = 141/279 (50%), Gaps = 3/279 (1%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
N LL +L + VE R+ EML + P++ ++ T++ GY G + A + + ++
Sbjct: 124 NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ 183
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
G PD TYT + G CR+ + AA KV +M +NG NEV+Y +I + KK E
Sbjct: 184 AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDE 243
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIH 387
A++LL M P+ ++D LC G A +++ + + D+ + + LI
Sbjct: 244 ALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 388 WLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
C + EA + E E G + +++TYN LI G C++ + +A L M+E+ P
Sbjct: 304 SFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVP 362
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+ TYN LI G C GN R+L M E+G +PN+ T
Sbjct: 363 DLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 112/252 (44%), Gaps = 36/252 (14%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P+ + + C+ EV+ A +V EM G N VSYT ++ G +D A
Sbjct: 185 GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEA 244
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ +L ++ D P+ TYTVL+D C G+ A+ + M E+G++P++ Y V+I++
Sbjct: 245 LSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQS 304
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+C EA LLE M+ G +P NV
Sbjct: 305 FCSGDTLDEASGLLEHMLENGLMP----------------NV------------------ 330
Query: 380 TVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+ LI CKK V +A + + E V L+TYNTLIAG C G L A RL
Sbjct: 331 ITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSL 389
Query: 439 MVEKGRAPNAFT 450
M E G PN T
Sbjct: 390 MEESGLVPNQRT 401
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 119/283 (42%), Gaps = 37/283 (13%)
Query: 205 VVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLG 264
+ SCN + AL V+ + + L P Y ++ A G ++ R+
Sbjct: 87 IKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKC--YNNLLSSLARFGLVEEMKRLYT 144
Query: 265 EVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWK 324
E+L+ +PD T+ LV+G+C+ G +V A + + + + G P+ TY I +C+ K
Sbjct: 145 EMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRK 204
Query: 325 KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAST 384
+ A + ++M + G C + +
Sbjct: 205 EVDAAFKVFKEMTQNG----------------------------------CHRNEVSYTQ 230
Query: 385 LIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKG 443
LI+ L + K+ EA ++ + + + ++ TY LI LC G+ EA L+ M E G
Sbjct: 231 LIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESG 290
Query: 444 RAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P+ Y +LI FC E +LE M ENG +PN TY
Sbjct: 291 IKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITY 333
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 92/184 (50%), Gaps = 5/184 (2%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A VFK T+ G N VS L+ L + +++ A+ +L +M PNV +YT ++
Sbjct: 209 AFKVFK-EMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLI 267
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G AM + ++ + G PD YTVL+ FC L A +++ M ENG+
Sbjct: 268 DALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM 327
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
PN +TY +I+ +CK K +A+ LL M+ + VP ++ C GN++ A
Sbjct: 328 PNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSA--- 383
Query: 368 WRVL 371
+R+L
Sbjct: 384 YRLL 387
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 144/313 (46%), Gaps = 38/313 (12%)
Query: 212 LKALCKVNEVEVAVRVLDEMLGM-GLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
+ A C+ +++ A+ D M + PNV Y TV+ GY GDMD A+R + +
Sbjct: 164 IDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKER 223
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
PD T+ +L++G+CR + A+ + +M+E G +PN V++ +I + K E V
Sbjct: 224 AKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGV 283
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERAC----------------EVWRVLRKI 374
+ +M+ G S C +VD LC EG V+ AC + ++ K+
Sbjct: 284 KMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKL 343
Query: 375 CGSDNTV--------------------ASTLIHWLCKKGKVLEARNVFEEF-EGGSVASL 413
CG + V +TL+ L K G+ +A E+ G +
Sbjct: 344 CGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDS 403
Query: 414 LTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEE 473
+T+N L+ LC +A RL KG P+ TY++L++GF K G KEG ++ E
Sbjct: 404 VTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNE 463
Query: 474 MCENGCLPNKSTY 486
M + LP+ TY
Sbjct: 464 MLDKDMLPDIFTY 476
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 156/325 (48%), Gaps = 3/325 (0%)
Query: 164 GIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEV 223
GI+P V+ + V K + + GV N V+ +L++ K ++
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK-KDGVVYNKVTYTLLMELSVKNGKMSD 312
Query: 224 AVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVD 283
A ++ DEM G+ +V YT+++ +G+M A + E+ +KG +P + TY L+D
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALID 372
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVP 343
G C+ G + AA +M++M+ GV +V + +I+ YC+ EA + + M +KG
Sbjct: 373 GVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQA 432
Query: 344 SSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVF 402
C + + A + ++R++ + LI CK+G V EA+ +F
Sbjct: 433 DVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLF 492
Query: 403 EEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKV 461
E V + +TYN +I C++G++ EA +L +M G P+++TY LI+G C
Sbjct: 493 VEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIA 552
Query: 462 GNAKEGIRILEEMCENGCLPNKSTY 486
N E +R+ EM G N TY
Sbjct: 553 DNVDEAMRLFSEMGLKGLDQNSVTY 577
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 151/324 (46%), Gaps = 37/324 (11%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV V S I+++ LC+ EVE + +++ E G+ P +Y T++ Y + D G
Sbjct: 219 GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGV 278
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ------------ 307
VL + G + TYT+L++ + G++ A K+ D+M E G++
Sbjct: 279 EGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISW 338
Query: 308 -----------------------PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS 344
P+ TYG +I+ CK + G A L+ +M KG +
Sbjct: 339 NCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNIT 398
Query: 345 SGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSDNTVASTLIHWLCKKGKVLEARN-VF 402
+ ++D C +G V+ A ++ V+ +K +D +T+ + + EA+ +F
Sbjct: 399 QVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458
Query: 403 EEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
EGG S ++Y LI C+ G + EA RL+ +M KG PNA TYN++I +CK G
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 463 NAKEGIRILEEMCENGCLPNKSTY 486
KE ++ M NG P+ TY
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTY 542
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 137/345 (39%), Gaps = 72/345 (20%)
Query: 147 GKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVV 206
GK A + F + R GI V + + A +F + T G+SP+
Sbjct: 308 GKMSDAEKLFDEMRER-GIESDVHVYTSLISWNCRKGNMKRAFLLF-DELTEKGLSPSSY 365
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+ L+ +CKV E+ A +++EM G+ V + T++ GY +G +D A + +
Sbjct: 366 TYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM 425
Query: 267 LDKGWAPDATT-----------------------------------YTVLVDGFCRQGRL 291
KG+ D T YT L+D +C++G +
Sbjct: 426 EQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNV 485
Query: 292 VAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKV 351
A ++ +M GVQPN +TY VMI AYCK K EA L +M G P
Sbjct: 486 EEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDP-------- 537
Query: 352 VDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSV 410
D+ ++LIH C V EA +F E G
Sbjct: 538 --------------------------DSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLD 571
Query: 411 ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLI 455
+ +TY +I+GL + G+ EA L+D+M KG + Y LI
Sbjct: 572 QNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%)
Query: 406 EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
+ G ++ + ++ GLC RGE+ ++ +L + KG P A+TYN +IN + K +
Sbjct: 217 DSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFS 276
Query: 466 EGIRILEEMCENGCLPNKSTY 486
+L+ M ++G + NK TY
Sbjct: 277 GVEGVLKVMKKDGVVYNKVTY 297
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 150/318 (47%), Gaps = 35/318 (11%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GVSP+V + N+L+ + CKV + A+ +L + + + V+Y TV+ G G D A
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV---ISIDTVTYNTVISGLCEHGLADEA 180
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEE---------------- 303
+ L E++ G PD +Y L+DGFC+ G V A ++D++ E
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNL 240
Query: 304 ------------NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKV 351
+G P+ VT+ +I CK K E LL +M P+ +
Sbjct: 241 HAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTL 300
Query: 352 VDVLCEEGNVERACEVWR--VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGG 408
VD L + A ++ V+R I D V + L+ L K G + EA F+ E
Sbjct: 301 VDSLFKANIYRHALALYSQMVVRGI-PVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDN 359
Query: 409 SVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGI 468
V +++TY L+ GLC+ G+L A + M+EK PN TY+ +ING+ K G +E +
Sbjct: 360 QVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAV 419
Query: 469 RILEEMCENGCLPNKSTY 486
+L +M + +PN TY
Sbjct: 420 SLLRKMEDQNVVPNGFTY 437
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 144/293 (49%), Gaps = 13/293 (4%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
V PN V+ L+ +L K N A+ + +M+ G+ ++V YT +M G GD+ A
Sbjct: 290 VYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAE 349
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+ +L+ P+ TYT LVDG C+ G L +A ++ M E V PN VTY MI Y
Sbjct: 350 KTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGY 409
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDN 379
K EAV+LL M + VP+ V+D L + G E A E+ + +R I +N
Sbjct: 410 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN 469
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+ L++ L + G++ E + + ++ G + Y +LI + G+ A ++
Sbjct: 470 YILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEE 529
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGN-----AKEGIRILEEMCENGCLPNKSTY 486
M E+G + +YN+LI+G K G A +G+R E G P+ +T+
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMR------EKGIEPDIATF 576
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 142/297 (47%), Gaps = 3/297 (1%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
+K R + G+ P++ + NI++ + K + E +++ D+M G+ P+++S V+G
Sbjct: 561 YKGMREK-GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLC 619
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
G M+ A+ +L +++ P+ TTY + +D + R A K + + G++ +
Sbjct: 620 ENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQ 679
Query: 312 TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
Y +I CK +A ++ DM +G +P + ++ +V +A + V+
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVM 739
Query: 372 RKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGEL 429
+ S N +T+I L G + E E + G TYN LI+G + G +
Sbjct: 740 MEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNM 799
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ ++ +M+ G P TYN+LI+ F VG + +L+EM + G PN STY
Sbjct: 800 KGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTY 856
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 153/301 (50%), Gaps = 6/301 (1%)
Query: 184 RHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSY 243
RH LA ++ R G+ ++V +L+ L K ++ A + +L VPNVV+Y
Sbjct: 311 RHALA--LYSQMVVR-GIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTY 367
Query: 244 TTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEE 303
T ++ G GD+ A ++ ++L+K P+ TY+ +++G+ ++G L A+ ++ ME+
Sbjct: 368 TALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMED 427
Query: 304 NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV-E 362
V PN TYG +I+ K K A+ L ++M G ++ + +V+ L G + E
Sbjct: 428 QNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKE 487
Query: 363 RACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIA 421
V ++ K D ++LI K G A EE E G +++YN LI+
Sbjct: 488 VKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLIS 547
Query: 422 GLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLP 481
G+ + G++ A + M EKG P+ T+N+++N K G+++ +++ ++M G P
Sbjct: 548 GMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKP 606
Query: 482 N 482
+
Sbjct: 607 S 607
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 133/329 (40%), Gaps = 69/329 (20%)
Query: 224 AVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM-DGAMRVLGEVLDKGWAPDATTYTVLV 282
A R L M G+VP+ + +++ + G + D + +++ G +PD VL+
Sbjct: 77 AARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLI 136
Query: 283 DGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHV 342
FC+ GRL AI ++ + + + VTY +I C+ EA L +MV+ G +
Sbjct: 137 HSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGIL 193
Query: 343 PSSGLCCKVVDVLCEEGNVERA-------CEVWRVLRKICGS------------------ 377
P + ++D C+ GN RA E+ + I S
Sbjct: 194 PDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMS 253
Query: 378 ----DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV----------------------- 410
D S++I+ LCK GKVLE + E E SV
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 411 -------------ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
L+ Y L+ GL + G+L EA + + ++E + PN TY L++G
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 458 FCKVGNAKEGIRILEEMCENGCLPNKSTY 486
CK G+ I+ +M E +PN TY
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTY 402
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+SPNV + N +++ L ++ + L EM G+ P+ +Y ++ G A G+M G+
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGS 802
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
M + E++ G P +TY VL+ F G+++ A +++ +M + GV PN TY MI
Sbjct: 803 MTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISG 862
Query: 320 YCK--------WKKP----GEAVNLLEDMV-RKGHVP 343
CK W K EA LL++MV KG++P
Sbjct: 863 LCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIP 899
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 130/308 (42%), Gaps = 50/308 (16%)
Query: 182 NKRHRLAHSVFKNSRT--RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPN 239
+ +H+ A ++FK T +G+ + N L+ LCK+ + A V+ +M G +P+
Sbjct: 653 SSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPD 712
Query: 240 VVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMD 299
V++ ++M GY + A+ +++ G +P+ TY ++ G G + K +
Sbjct: 713 TVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLS 772
Query: 300 DMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEG 359
+M+ G++P++ TY +I K ++ + +M+ G VP +
Sbjct: 773 EMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKT-------------- 818
Query: 360 NVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNT 418
+ + LI GK+L+AR + +E + G + TY T
Sbjct: 819 --------------------STYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCT 858
Query: 419 LIAGLC------------ERGELCEAARLWDDMV-EKGRAPNAFTYNLLINGFCKVGNAK 465
+I+GLC + L EA L +MV EKG P T + F K G
Sbjct: 859 MISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYWISAAFSKPGMKV 918
Query: 466 EGIRILEE 473
+ R L+E
Sbjct: 919 DAERFLKE 926
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 186/416 (44%), Gaps = 35/416 (8%)
Query: 65 LISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFL-KLSRARCFPEMESLLSTLPRHS 123
L+ Q D LSL+ F A+T + S H L AI L L++ R F ES+L
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPGS--HSLETHAIVLHTLTKNRKFKSAESIL------- 138
Query: 124 PQQFLDHCGEDPLVTAIRGYGLAGKP-DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQN 182
D LV G L K D+ L ++ +S + R
Sbjct: 139 ---------RDVLVNG--GVDLPAKVFDALLYSYRECDS------TPRVFDSLFKTFAHL 181
Query: 183 KRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVS 242
K+ R A F + +G P V SCN + +L V++A+R EM + PN +
Sbjct: 182 KKFRNATDTFMQMKD-YGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYT 240
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
VM GY G +D + +L ++ G+ +Y L+ G C +G L +A+K+ + M
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 303 ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVE 362
++G+QPN VT+ +I +C+ K EA + +M P++ +++ ++G+ E
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 363 RACEVWRVLRKICGS---DNTVASTLIHWLCKKGKVLEARNVFEEFEGGS-VASLLTYNT 418
A + + +C D + LI LCK+ K +A +E + + V + T++
Sbjct: 361 MAFRFYEDM--VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 419 LIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
LI G C R L+ M+ G PN T+N+L++ FC+ + ++L EM
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
L K + + A +M G +P V S M +G +D A+R E+
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
+P+ T +++ G+CR G+L I+++ DME G + +V+Y +I +C+ A+
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWL 389
L M + G P+ ++ C ++ A +V+ ++ + + NTV +TLI+
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 390 CKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
++G A +E+ G +LTYN LI GLC++ + +AA+ ++ ++ PN+
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNS 413
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
T++ LI G C NA G + + M +GC PN+ T+
Sbjct: 414 STFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTF 451
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 5/274 (1%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSV-FKN 194
L + GY +GK D + +E RLG R + + + L+ ++ KN
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDME-RLGFRATDVSYNTLIAGHCE--KGLLSSALKLKN 297
Query: 195 SRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRG 254
+ G+ PNVV+ N L+ C+ +++ A +V EM + + PN V+Y T++ GY+ +G
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 255 DMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYG 314
D + A R +++ G D TY L+ G C+Q + A + + ++++ + PN T+
Sbjct: 358 DHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFS 417
Query: 315 VMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRK 373
+I C K L + M+R G P+ +V C + + A +V R ++R+
Sbjct: 418 ALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Query: 374 ICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG 407
D+ + + L +GK + + +E EG
Sbjct: 478 SIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEG 511
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 186/416 (44%), Gaps = 35/416 (8%)
Query: 65 LISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFL-KLSRARCFPEMESLLSTLPRHS 123
L+ Q D LSL+ F A+T + S H L AI L L++ R F ES+L
Sbjct: 88 LLKIQKDYLLSLEFFNWAKTRNPGS--HSLETHAIVLHTLTKNRKFKSAESIL------- 138
Query: 124 PQQFLDHCGEDPLVTAIRGYGLAGKP-DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQN 182
D LV G L K D+ L ++ +S + R
Sbjct: 139 ---------RDVLVNG--GVDLPAKVFDALLYSYRECDS------TPRVFDSLFKTFAHL 181
Query: 183 KRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVS 242
K+ R A F + +G P V SCN + +L V++A+R EM + PN +
Sbjct: 182 KKFRNATDTFMQMKD-YGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYT 240
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
VM GY G +D + +L ++ G+ +Y L+ G C +G L +A+K+ + M
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMG 300
Query: 303 ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVE 362
++G+QPN VT+ +I +C+ K EA + +M P++ +++ ++G+ E
Sbjct: 301 KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHE 360
Query: 363 RACEVWRVLRKICGS---DNTVASTLIHWLCKKGKVLEARNVFEEFEGGS-VASLLTYNT 418
A + + +C D + LI LCK+ K +A +E + + V + T++
Sbjct: 361 MAFRFYEDM--VCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 419 LIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
LI G C R L+ M+ G PN T+N+L++ FC+ + ++L EM
Sbjct: 419 LIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREM 474
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 136/278 (48%), Gaps = 2/278 (0%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
L K + + A +M G +P V S M +G +D A+R E+
Sbjct: 174 LFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCK 233
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
+P+ T +++ G+CR G+L I+++ DME G + +V+Y +I +C+ A+
Sbjct: 234 ISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSAL 293
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWL 389
L M + G P+ ++ C ++ A +V+ ++ + + NTV +TLI+
Sbjct: 294 KLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGY 353
Query: 390 CKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
++G A +E+ G +LTYN LI GLC++ + +AA+ ++ ++ PN+
Sbjct: 354 SQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNS 413
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
T++ LI G C NA G + + M +GC PN+ T+
Sbjct: 414 STFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTF 451
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 5/274 (1%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSV-FKN 194
L + GY +GK D + +E RLG R + + + L+ ++ KN
Sbjct: 241 LNMVMSGYCRSGKLDKGIELLQDME-RLGFRATDVSYNTLIAGHCE--KGLLSSALKLKN 297
Query: 195 SRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRG 254
+ G+ PNVV+ N L+ C+ +++ A +V EM + + PN V+Y T++ GY+ +G
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQG 357
Query: 255 DMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYG 314
D + A R +++ G D TY L+ G C+Q + A + + ++++ + PN T+
Sbjct: 358 DHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFS 417
Query: 315 VMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRK 373
+I C K L + M+R G P+ +V C + + A +V R ++R+
Sbjct: 418 ALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRR 477
Query: 374 ICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG 407
D+ + + L +GK + + +E EG
Sbjct: 478 SIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEG 511
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 161/367 (43%), Gaps = 72/367 (19%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
K+ G P+ + +L+KALC ++ A + DEM+ G PNV +YT ++ G
Sbjct: 288 LKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLC 347
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
G ++ A V +++ P TY L++G+C+ GR+V A +++ ME+ +PN
Sbjct: 348 RDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVR 407
Query: 312 TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS--------SGLC--------------- 348
T+ ++E C+ KP +AV+LL+ M+ G P GLC
Sbjct: 408 TFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Query: 349 ------------CKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHWLCKKGKV 395
+++ C++G + A + +LRK D +TLI +CK GK
Sbjct: 468 NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKT 527
Query: 396 LEARNVFEEF------------------------------------EGGSVASLLTYNTL 419
+A + E + G V S++TY TL
Sbjct: 528 RDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTL 587
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
+ GL G++ + R+ + M G PN + Y ++ING C+ G +E ++L M ++G
Sbjct: 588 VDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGV 647
Query: 480 LPNKSTY 486
PN TY
Sbjct: 648 SPNHVTY 654
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 146/298 (48%), Gaps = 3/298 (1%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F R FG N + LL +L K++ +A M G V ++ Y T++
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM-EENGVQPNE 310
G + A + ++L G+ D+ T L+ GFCR L A+KV D M +E PN
Sbjct: 207 KNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNS 266
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-R 369
V+Y ++I C+ + EA L + M KG PS+ ++ LC+ G +++A ++
Sbjct: 267 VSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDE 326
Query: 370 VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGE 428
++ + C + + LI LC+ GK+ EA V + + S++TYN LI G C+ G
Sbjct: 327 MIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGR 386
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ A L M ++ PN T+N L+ G C+VG + + +L+ M +NG P+ +Y
Sbjct: 387 VVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSY 444
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 142/286 (49%), Gaps = 2/286 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PNV + N L++ LC+V + AV +L ML GL P++VSY ++ G G M+ A ++
Sbjct: 404 PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKL 463
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
L + PD T+T +++ FC+QG+ A + M G+ +EVT +I+ CK
Sbjct: 464 LSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCK 523
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K +A+ +LE +V+ + + ++D+L + V+ + + K+ + V
Sbjct: 524 VGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVT 583
Query: 383 -STLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMV 440
+TL+ L + G + + + E + G + ++ Y +I GLC+ G + EA +L M
Sbjct: 584 YTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ G +PN TY +++ G+ G + + M E G N Y
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIY 689
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 172/365 (47%), Gaps = 23/365 (6%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKN-SRTR 198
I + GK D A FL + R GI + + R A + + + R
Sbjct: 483 INAFCKQGKADVA-SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
+P+ S N++L L K +V+ + +L ++ +GLVP+VV+YTT++ G GD+ G
Sbjct: 542 ILTTPH--SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITG 599
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
+ R+L + G P+ YT++++G C+ GR+ A K++ M+++GV PN VTY VM++
Sbjct: 600 SFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Query: 319 AYCKWKKPGEAVNLLEDMVRKGH-----VPSSGLC--------------CKVVDVLCEEG 359
Y K A+ + MV +G+ + SS L V D+ E
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRET 719
Query: 360 NVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTL 419
+ E E+ V+ ++ G + + L+ LCK+G+ E+ ++ + V + +
Sbjct: 720 DPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDII 779
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
+ C + + + L +++ G P+ ++ L+I G K G+A+ ++ E+ +
Sbjct: 780 MESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNG 839
Query: 480 LPNKS 484
+ KS
Sbjct: 840 VVEKS 844
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 150/321 (46%), Gaps = 4/321 (1%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I GY G+ A +E R +P+VR + + A + K
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKR-ACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN- 435
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+SP++VS N+L+ LC+ + A ++L M + P+ +++T ++ + +G D A
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVA 495
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
LG +L KG + D T T L+DG C+ G+ A+ +++ + + + + V+++
Sbjct: 496 SAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDM 555
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICGSD 378
K K E + +L + + G VPS +VD L G++ + + +++ C +
Sbjct: 556 LSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPN 615
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWD 437
+ +I+ LC+ G+V EA + + V+ + +TY ++ G G+L A
Sbjct: 616 VYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVR 675
Query: 438 DMVEKGRAPNAFTYNLLINGF 458
MVE+G N Y+ L+ GF
Sbjct: 676 AMVERGYELNDRIYSSLLQGF 696
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/357 (26%), Positives = 167/357 (46%), Gaps = 10/357 (2%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I GY AG + F + + G++ V V++ A V+K
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G+SPNVV+ IL+K LC+ + A + ++L G+ P++V+Y++++ G+ G++
Sbjct: 385 Q-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
+ +++ G+ PD Y VLVDG +QG ++ A++ M ++ N V + +I
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVV------DVLCEEGNVERACEVWRVL 371
+ +C+ + EA+ + M G P V+ D C+ +++ ++
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLM 563
Query: 372 -RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGEL 429
R +D V + +IH L K ++ +A F EG ++TYNT+I G C L
Sbjct: 564 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 623
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
EA R+++ + PN T +LI+ CK + IR+ M E G PN TY
Sbjct: 624 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 680
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 3/289 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G +VSCN +LK L V+++EVA R+L +L G PNVV++ T++ G+ RG+MD A
Sbjct: 247 GFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + +G PD Y+ L+DG+ + G L K+ GV+ + V + I+
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSD 378
Y K A + + M+ +G P+ ++ LC++G + A ++ ++L++
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
S+LI CK G + ++E+ + G ++ Y L+ GL ++G + A R
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M+ + N +N LI+G+C++ E +++ M G P+ +T+
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 168/386 (43%), Gaps = 45/386 (11%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I+G G+ A + +I R G+ PS+ + R +++++ +
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKR-GMEPSIVTYSSLIDGFCKCGNLRSGFALYED-MIKM 455
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P+VV +L+ L K + A+R +MLG + NVV + +++ G+ D A
Sbjct: 456 GYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEA 515
Query: 260 MRVLGEVLDKGWAPDATTYT------VLVDGFCRQGRLVAAIKVMDDMEENGV------- 306
++V + G PD T+T ++ D FC+ + +++ D M+ N +
Sbjct: 516 LKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVC 575
Query: 307 ----------------------------QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVR 338
+P+ VTY MI YC ++ EA + E +
Sbjct: 576 NVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKV 635
Query: 339 KGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLE 397
P++ ++ VLC+ +++ A ++ ++ + N V L+ W K +
Sbjct: 636 TPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEG 695
Query: 398 ARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLIN 456
+ +FEE E G S+++Y+ +I GLC+RG + EA ++ ++ P+ Y +LI
Sbjct: 696 SFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIR 755
Query: 457 GFCKVGNAKEGIRILEEMCENGCLPN 482
G+CKVG E + E M NG P+
Sbjct: 756 GYCKVGRLVEAALLYEHMLRNGVKPD 781
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 162/366 (44%), Gaps = 44/366 (12%)
Query: 164 GIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEV 223
GI P+V Q+ R A ++ R G+ P++V+ + L+ CK +
Sbjct: 386 GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-GMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 224 AVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVD 283
+ ++M+ MG P+VV Y ++ G + +G M AMR ++L + + + L+D
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVTY------GVMIEAYCKWKKPGEAVNLLEDMV 337
G+CR R A+KV M G++P+ T+ +M +A+CK KP + L + M
Sbjct: 505 GWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQ 564
Query: 338 RKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-------------ICG-------- 376
R +C V+ +L + +E A + + L + ICG
Sbjct: 565 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 624
Query: 377 --------------SDNTVAST-LIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLI 420
NTV T LIH LCK + A +F E GS + +TY L+
Sbjct: 625 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 684
Query: 421 AGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL 480
+ ++ + +L+++M EKG +P+ +Y+++I+G CK G E I + + L
Sbjct: 685 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 744
Query: 481 PNKSTY 486
P+ Y
Sbjct: 745 PDVVAY 750
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 150/343 (43%), Gaps = 48/343 (13%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A +FK R G+ P++++ + L+ K + + ++ + L G+ +VV +++ +
Sbjct: 305 AFDLFKVMEQR-GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
Y GD+ A V +L +G +P+ TYT+L+ G C+ GR+ A + + + G++
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P+ VTY +I+ +CK L EDM++ G+ P + +VD L ++G + A
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 368 -WRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE-------------------- 406
++L + + V ++LI C+ + EA VF
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 407 ------------GGSVASLLTYNTLIAGL------------CERGELCEAARLWDDMVEK 442
G + L+ N + A + C R E +A++ +++++E
Sbjct: 544 EDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIE--DASKFFNNLIEG 601
Query: 443 GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
P+ TYN +I G+C + E RI E + PN T
Sbjct: 602 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 644
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 64/112 (57%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G PN V+ L+ K ++E + ++ +EM G+ P++VSY+ ++ G RG +D A
Sbjct: 672 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 731
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
+ + +D PD Y +L+ G+C+ GRLV A + + M NGV+P+++
Sbjct: 732 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 158/320 (49%), Gaps = 5/320 (1%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
R Y A P A R F R+ GI+P V K A F ++ F
Sbjct: 145 FRAYSRANLPSEACRAFNRM-VEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKG-F 202
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+ + +IL++ ++ + A +V DEML V ++++Y ++ GD+DG
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ E+ + G PDA ++ + + +C G + +A KV+D M+ + PN T+ +I+
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSD 378
CK +K +A LL++M++KG P + ++ C+ V RA ++ R+ R C D
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLC-ERGELCEAARLW 436
+ ++ L + G+ A ++E E ++ TY +I GL ++G+L EA R +
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYF 442
Query: 437 DDMVEKGRAPNAFTYNLLIN 456
+ M+++G P + T +L N
Sbjct: 443 EMMIDEGIPPYSTTVEMLRN 462
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 121/279 (43%), Gaps = 2/279 (0%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
I+ +A + N A R + M+ G+ P V ++ + ++ A G+
Sbjct: 143 IVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGF 202
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G P A TY++LV G+ R A KV D+M E + + Y +++A CK
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHW 388
+ ++M G P + + C+ G+V A +V +++ N + +I
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 389 LCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
LCK KV +A + +E + G+ TYN+++A C+ E+ A +L M P+
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
TYN+++ ++G I E M E P +TY
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATY 421
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 102/221 (46%), Gaps = 7/221 (3%)
Query: 271 WAPDATTYTVLVD--GFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
+A +Y +LV+ G +Q L+ +++ E N + + + ++ AY + P E
Sbjct: 98 FAHSLESYHILVEILGSSKQFALLWDF-LIEAREYNYFEISSKVFWIVFRAYSRANLPSE 156
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR--KICGSDNTVASTLI 386
A MV G P +++ LC++ +V A E + + I S T S L+
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTY-SILV 215
Query: 387 HWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRA 445
+ AR VF+E E V LL YN L+ LC+ G++ +++ +M G
Sbjct: 216 RGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLK 275
Query: 446 PNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P+A+++ + I+ +C G+ ++L+ M +PN T+
Sbjct: 276 PDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTF 316
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 140/282 (49%), Gaps = 3/282 (1%)
Query: 208 CNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL 267
CN + CK +V+ A L M G+ PNVV Y +M + +MD A + E+L
Sbjct: 452 CNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEML 511
Query: 268 DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG 327
+KG P+ TY++L+DGF + A V++ M + + NEV Y +I CK +
Sbjct: 512 EKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTS 571
Query: 328 EAVNLLEDMVR-KGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STL 385
+A +L+++++ K + S ++D + G+ + A E +R + + S N V ++L
Sbjct: 572 KAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL 631
Query: 386 IHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
I+ CK ++ A + E + + L Y LI G C++ ++ A L+ ++ E G
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL 691
Query: 445 APNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
PN YN LI+GF +G I + ++M +G + TY
Sbjct: 692 MPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTY 733
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 168/377 (44%), Gaps = 40/377 (10%)
Query: 148 KPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVS 207
KP+ A++ F R+ SR G P + +A + + R + GV + +
Sbjct: 254 KPEEAVKIFRRVMSR-GAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQET 312
Query: 208 CNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL 267
++ A K +E AVRV+DEM+G G+ +V++ T+++ GY ++ A+ + +
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRME 372
Query: 268 DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG 327
++G APD ++V+V+ FC+ + AI+ M+ + P+ V MI+ K + P
Sbjct: 373 EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPE 432
Query: 328 EAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR------------------ 369
A+ + D + + +C K+ + C++G V+ A +
Sbjct: 433 AALEIFNDSF-ESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMM 491
Query: 370 ------------------VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV- 410
+L K +N S LI K A +V + +
Sbjct: 492 LAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFE 551
Query: 411 ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFT-YNLLINGFCKVGNAKEGIR 469
A+ + YNT+I GLC+ G+ +A + +++++ R + T YN +I+GF KVG+ +
Sbjct: 552 ANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVE 611
Query: 470 ILEEMCENGCLPNKSTY 486
EM ENG PN T+
Sbjct: 612 TYREMSENGKSPNVVTF 628
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/346 (26%), Positives = 174/346 (50%), Gaps = 11/346 (3%)
Query: 147 GKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVV 206
GK D+A +FL++ + GI P+V + K LA S+F + G+ PN
Sbjct: 463 GKVDAA-TSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK-GLEPNNF 520
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+ +IL+ K + + A V+++M N V Y T++ G G A +L +
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580
Query: 267 L-DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK 325
+ +K ++ T+Y ++DGF + G +A++ +M ENG PN VT+ +I +CK +
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640
Query: 326 PGEAVNL---LEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN-TV 381
A+ + ++ M K +P+ G ++D C++ +++ A ++ L ++ N +V
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYG---ALIDGFCKKNDMKTAYTLFSELPELGLMPNVSV 697
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMV 440
++LI GK+ A +++++ ++ L TY T+I GL + G + A+ L+ +++
Sbjct: 698 YNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELL 757
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ G P+ + +L+NG K G + ++LEEM + PN Y
Sbjct: 758 DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLY 803
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 131/258 (50%), Gaps = 2/258 (0%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
S + S N ++ KV + + AV EM G PNVV++T+++ G+ MD A+
Sbjct: 587 SMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALE 646
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
+ E+ D Y L+DGFC++ + A + ++ E G+ PN Y +I +
Sbjct: 647 MTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFR 706
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNT 380
K A++L + MV G ++D L ++GN+ A +++ L + D
Sbjct: 707 NLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEI 766
Query: 381 VASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDM 439
+ L++ L KKG+ L+A + EE + V ++L Y+T+IAG G L EA RL D+M
Sbjct: 767 LHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEM 826
Query: 440 VEKGRAPNAFTYNLLING 457
+EKG + +NLL++G
Sbjct: 827 LEKGIVHDDTVFNLLVSG 844
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 190/450 (42%), Gaps = 21/450 (4%)
Query: 55 HRLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMES 114
H +++ L+ R++DP +LQ + HR + + I + LS +
Sbjct: 76 HVDDARVIEVLLGRRNDPVSALQYCNWVKPLHRLCEGGDVFWVLIHILLSSIHTHDRASN 135
Query: 115 LLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKP----------------DSALRTFLR 158
LL ++P + + + LV + + +G P D A+ F
Sbjct: 136 LLVMFVSNNPT-LIPNVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGL 194
Query: 159 IESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKV 218
+ R + P V V++ A ++ N GV+ + V+ +L++A +
Sbjct: 195 MVDR-KVVPFVPYVNNVLSSLVRSNLIDEAKEIY-NKMVLIGVAGDNVTTQLLMRASLRE 252
Query: 219 NEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDAT-T 277
+ E AV++ ++ G P+ + ++ + D+ A+ +L E+ K P + T
Sbjct: 253 RKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQET 312
Query: 278 YTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMV 337
YT ++ F ++G + A++VMD+M G+ + + ++ YCK + G+A++L M
Sbjct: 313 YTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRME 372
Query: 338 RKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVL 396
+G P + +V+ C+ +E+A E + ++ + + + T+I K
Sbjct: 373 EEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPE 432
Query: 397 EARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLIN 456
A +F + +A N + C++G++ A M +KG PN YN ++
Sbjct: 433 AALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMML 492
Query: 457 GFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
C++ N I EM E G PN TY
Sbjct: 493 AHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 148/286 (51%), Gaps = 15/286 (5%)
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGE 265
V N+ AL K+ VE A +L EM G+VP+V++YTT++ GY +G + A+ ++ E
Sbjct: 389 VCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDE 448
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK 325
++ G +PD TY VLV G R G +++ + M+ G +PN VT V+IE C +K
Sbjct: 449 MIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARK 508
Query: 326 PGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RV---LRKICGSDNTV 381
EA + + +K P + V CE G ++A + + R+ LRK +V
Sbjct: 509 VKEAEDFFSSLEQK--CPENK--ASFVKGYCEAGLSKKAYKAFVRLEYPLRK------SV 558
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTY-NTLIAGLCERGELCEAARLWDDMV 440
L LC +G + +A +V ++ V + +I C+ + EA L+D MV
Sbjct: 559 YIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMV 618
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
E+G P+ FTY ++I+ +C++ ++ + E+M + G P+ TY
Sbjct: 619 ERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTY 664
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 144/322 (44%), Gaps = 34/322 (10%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPN------------------ 239
R ++ +CN L+ + + ++ + + + ++ +GL N
Sbjct: 174 RLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLE 233
Query: 240 -----------VVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVL---VDGF 285
V Y T + G G+ + A+ ++ E++D+ + VL V GF
Sbjct: 234 EAAMLLIENESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGF 293
Query: 286 CRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSS 345
C + ++ AA V+ +MEE G + +I+ YCK EA+ L+ M+ KG +
Sbjct: 294 CNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNC 353
Query: 346 GLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEE 404
+ ++ C+ A E ++ R + D + L K G+V EA + +E
Sbjct: 354 VIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQE 413
Query: 405 FEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGN 463
+ G V ++ Y TLI G C +G++ +A L D+M+ G +P+ TYN+L++G + G+
Sbjct: 414 MKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGH 473
Query: 464 AKEGIRILEEMCENGCLPNKST 485
+E + I E M G PN T
Sbjct: 474 EEEVLEIYERMKAEGPKPNAVT 495
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 123/278 (44%), Gaps = 36/278 (12%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
++++ C +++ A V+ EM +G +V + V+ Y ++ A+ L ++L K
Sbjct: 288 MVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGK 347
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G + ++++ +C+ + A++ + + + + V Y V +A K + EA
Sbjct: 348 GLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEA 407
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWL 389
LL++M +G VP D +TLI
Sbjct: 408 FELLQEMKDRGIVP----------------------------------DVINYTTLIDGY 433
Query: 390 CKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
C +GKV++A ++ +E G ++ L+TYN L++GL G E +++ M +G PNA
Sbjct: 434 CLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNA 493
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
T +++I G C KE + E C NK+++
Sbjct: 494 VTNSVIIEGLCFARKVKEAEDFFSSL-EQKCPENKASF 530
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 126/308 (40%), Gaps = 31/308 (10%)
Query: 83 QTHHRASSHHPLPY----RAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVT 138
+ + R + P P I L AR E E S+L + P+ +
Sbjct: 479 EIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPEN---------KAS 529
Query: 139 AIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTR 198
++GY AG A + F+R+E L ++ K AH V K +
Sbjct: 530 FVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEK----AHDVLKKM-SA 584
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
+ V P C ++ A CK+N V A + D M+ GL+P++ +YT ++ Y ++
Sbjct: 585 YRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQK 644
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCR-----------QGRL--VAAIKVMDDMEENG 305
A + ++ +G PD TYTVL+D + + QG + A +V+ + G
Sbjct: 645 AESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAG 704
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERAC 365
+ + V Y V+I+ CK +A L + M+ G P ++ +G ++ A
Sbjct: 705 IGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAV 764
Query: 366 EVWRVLRK 373
+ L K
Sbjct: 765 TLVTELSK 772
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 124/310 (40%), Gaps = 34/310 (10%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
L+KA + + A VL + + V ++ + +M G + M + ++ G
Sbjct: 152 LVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLG 211
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEE--------NGV---------------- 306
+ TY ++V CR+G L A ++ + E NG+
Sbjct: 212 LCANEYTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETEKAVALILEL 271
Query: 307 --------QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEE 358
G+++ +C K A +++ +M G C V+D C+
Sbjct: 272 IDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKN 331
Query: 359 GNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTY 416
N+ A ++L K + + S ++ CK LEA F+EF ++ + Y
Sbjct: 332 MNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCY 391
Query: 417 NTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE 476
N L + G + EA L +M ++G P+ Y LI+G+C G + + +++EM
Sbjct: 392 NVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIG 451
Query: 477 NGCLPNKSTY 486
NG P+ TY
Sbjct: 452 NGMSPDLITY 461
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVN---------EVEVAVR----VLDEMLGM 234
A S+F++ + R G+ P+VV+ +LL K++ + EV R VL E
Sbjct: 645 AESLFEDMKQR-GIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAA 703
Query: 235 GLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAA 294
G+ +VV YT ++ +++ A + ++D G PD YT L+ + R+G + A
Sbjct: 704 GIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMA 763
Query: 295 IKVMDDMEENGVQPNEVTYGVMIEAYCKWKK 325
+ ++ ++ + P+E + A K K+
Sbjct: 764 VTLVTELSKKYNIPSESFEAAVKSAALKAKR 794
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 149/310 (48%), Gaps = 9/310 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++P+ ++ N +L+ ++ +E A V DEM G+VP+ SY ++ G G + A
Sbjct: 177 GLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEA 236
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
R L ++ +G+ PD T T+++ C G + AI M + G +PN + + +I+
Sbjct: 237 DRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDG 296
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
CK +A +LE+MVR G P+ ++D LC+ G E+A +R+ K+ SD
Sbjct: 297 LCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKA---FRLFLKLVRSDT 353
Query: 380 T-----VASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAA 433
+++I CK+ K+ A +F E G ++ TY TLI G C+ G A
Sbjct: 354 YKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAY 413
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXX 493
L + M ++G PN +TYN I+ CK A E +L + G + TY
Sbjct: 414 ELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQ 473
Query: 494 XXXXXMNQEI 503
+NQ +
Sbjct: 474 CKQNDINQAL 483
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 150/328 (45%), Gaps = 44/328 (13%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G PN+++ L+ LCK ++ A +L+EM+ G PNV ++T ++ G RG +
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 259 AMRV-LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A R+ L V + P+ TYT ++ G+C++ +L A + M+E G+ PN TY +I
Sbjct: 341 AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLI 400
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI--C 375
+CK G A L+ M +G +P+ +D LC++ RA E + +L K C
Sbjct: 401 NGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS---RAPEAYELLNKAFSC 457
Query: 376 G--SDNTVASTLIHWLCKKGKVLEARNVF-----EEFEG--------------------- 407
G +D + LI CK+ + +A F FE
Sbjct: 458 GLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKES 517
Query: 408 ----------GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
G + + TY ++I+ C+ G++ A + + +M G P++FTY LI+G
Sbjct: 518 ERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISG 577
Query: 458 FCKVGNAKEGIRILEEMCENGCLPNKST 485
CK E ++ E M + G P + T
Sbjct: 578 LCKKSMVDEACKLYEAMIDRGLSPPEVT 605
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 155/329 (47%), Gaps = 6/329 (1%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
+L+ ++ + AV ++ +M GL P+ ++ V+ G ++ A V E+ +G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
PD+++Y ++V G R G++ A + + M + G P+ T +++ A C+ A+
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAST-LIHWL 389
M+ G P+ ++D LC++G++++A E+ + + N T LI L
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332
Query: 390 CKKGKVLEARNVFEEFEGGSVA--SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
CK+G +A +F + ++ TY ++I G C+ +L A L+ M E+G PN
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXMNQEINKVV 507
TY LING CK G+ ++ M + G +PN TY E +++
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRA-PEAYELL 451
Query: 508 ALAMSTGV--DGELWDLLVKHVVGNLDIN 534
A S G+ DG + +L++ DIN
Sbjct: 452 NKAFSCGLEADGVTYTILIQEQCKQNDIN 480
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 134/305 (43%), Gaps = 3/305 (0%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I G G + A R FL++ +P+V + + A +F + +
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ- 387
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ PNV + L+ CK A +++ M G +PN+ +Y + + A
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+L + G D TYT+L+ C+Q + A+ M + G + + ++I A
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSD 378
+C+ KK E+ L + +V G +P+ ++ C+EG+++ A + + +++ C D
Sbjct: 508 FCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPD 567
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ +LI LCKK V EA ++E + G +T TL C+R + A L +
Sbjct: 568 SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLE 627
Query: 438 DMVEK 442
+ +K
Sbjct: 628 PLDKK 632
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 114/252 (45%), Gaps = 3/252 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G PN+ + N + +LCK + A +L++ GL + V+YT ++ + D++ A
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 482
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + G+ D +L+ FCRQ ++ + ++ + G+ P + TY MI
Sbjct: 483 LAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISC 542
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSD 378
YCK A+ +M R G VP S ++ LC++ V+ AC+++ ++ +
Sbjct: 543 YCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPP 602
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
TL + CK+ A + E + + T TL+ LC ++ AA +
Sbjct: 603 EVTRVTLAYEYCKRNDSANAMILLEPLDKK--LWIRTVRTLVRKLCSEKKVGVAALFFQK 660
Query: 439 MVEKGRAPNAFT 450
++EK + + T
Sbjct: 661 LLEKDSSADRVT 672
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 92/187 (49%), Gaps = 4/187 (2%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
NIL+ A C+ +++ + R+ ++ +GL+P +YT+++ Y GD+D A++ +
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
G PD+ TY L+ G C++ + A K+ + M + G+ P EVT + YCK
Sbjct: 562 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSAN 621
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIH 387
A+ LLE + +K + + +V LC E V A + ++L K +D +
Sbjct: 622 AMILLEPLDKKLWIRTVR---TLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTT 678
Query: 388 WLCKKGK 394
+ GK
Sbjct: 679 ACSESGK 685
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 148/297 (49%), Gaps = 8/297 (2%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
N ++ + PN+V+ N LL ALCK V A V + M P+ +Y+ ++ G+
Sbjct: 192 NVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKE 250
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
++ A V E++D G PD TY+++VD C+ GR+ A+ ++ M+ + +P Y
Sbjct: 251 PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
V++ Y + EAV+ +M R G + ++ C+ R V+RVL++
Sbjct: 311 SVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKAN---RMKNVYRVLKE 367
Query: 374 ICGS----DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGEL 429
+ ++ + ++ L ++G+ EA +VF + TY +I CE+ E+
Sbjct: 368 MKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEM 427
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A ++W M +KG P+ T+++LING C+ ++ +LEEM E G P+ T+
Sbjct: 428 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTF 484
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 194/430 (45%), Gaps = 18/430 (4%)
Query: 56 RLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESL 115
R+ +++ +++R + L F R H Y + ++ R + M L
Sbjct: 97 RVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDL 156
Query: 116 LSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXX 175
++ + + C +R Y A K D A+ F +E + + P++
Sbjct: 157 INAMRKKKMLNVETFC------IVMRKYARAQKVDEAIYAFNVME-KYDLPPNLVAFNGL 209
Query: 176 XXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG 235
++K R A VF+N R RF +P+ + +ILL+ K + A V EM+ G
Sbjct: 210 LSALCKSKNVRKAQEVFENMRDRF--TPDSKTYSILLEGWGKEPNLPKAREVFREMIDAG 267
Query: 236 LVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAI 295
P++V+Y+ ++ G +D A+ ++ + P Y+VLV + + RL A+
Sbjct: 268 CHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAV 327
Query: 296 KVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVL 355
+ME +G++ + + +I A+CK + +L++M KG P+S C ++ L
Sbjct: 328 DTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHL 387
Query: 356 CEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLL 414
E G + A +V+R + K+C D + +I C+K ++ A V++ + G S+
Sbjct: 388 IERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMH 447
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTY----NLLIN----GFCKVGNAKE 466
T++ LI GLCE +A L ++M+E G P+ T+ LLI K N K
Sbjct: 448 TFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507
Query: 467 GIRILEEMCE 476
+ + E +C+
Sbjct: 508 NVLVNEPLCD 517
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR 372
Y +MIE+ K ++ +L+ M RK + + C V+ V+ A + V+
Sbjct: 137 YHMMIESTAKIRQYKLMWDLINAM-RKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVME 195
Query: 373 KICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCE 431
K N VA + L+ LCK V +A+ VFE TY+ L+ G + L +
Sbjct: 196 KYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPK 255
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A ++ +M++ G P+ TY+++++ CK G E + I+ M + C P Y
Sbjct: 256 AREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIY 310
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 170/386 (44%), Gaps = 39/386 (10%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I GY AG + F + + G++ V V++ A V+K
Sbjct: 326 TLIDGYFKAGMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G+SPNVV+ IL+K LC+ + A + ++L G+ P++V+Y++++ G+ G++
Sbjct: 385 Q-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
+ +++ G+ PD Y VLVDG +QG ++ A++ M ++ N V + +I
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 318 EAYCKWKKPGEAVN-----------------------------------LLEDMVRKGHV 342
+ +C+ + EA+ L M + G
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLE 563
Query: 343 PSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSDNTVASTLIHWLCKKGKVLEARNV 401
P + C ++D C+ +++ ++ R +D V + +IH L K ++ +A
Sbjct: 564 PDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 623
Query: 402 FEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCK 460
F EG ++TYNT+I G C L EA R+++ + PN T +LI+ CK
Sbjct: 624 FNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCK 683
Query: 461 VGNAKEGIRILEEMCENGCLPNKSTY 486
+ IR+ M E G PN TY
Sbjct: 684 NNDMDGAIRMFSIMAEKGSKPNAVTY 709
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 144/316 (45%), Gaps = 37/316 (11%)
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
NVV N L+ C++N + A++V M G+ P+V ++TTVM G ++ A+ +
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 264 GEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV----------------- 306
+ G PDA Y L+D FC+ + +++ D M+ N +
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 307 ------------------QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLC 348
+P+ VTY MI YC ++ EA + E + P++
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTL 674
Query: 349 CKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEF-E 406
++ VLC+ +++ A ++ ++ + N V L+ W K + + +FEE E
Sbjct: 675 TILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQE 734
Query: 407 GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKE 466
G S+++Y+ +I GLC+RG + EA ++ ++ P+ Y +LI G+CKVG E
Sbjct: 735 KGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE 794
Query: 467 GIRILEEMCENGCLPN 482
+ E M NG P+
Sbjct: 795 AALLYEHMLRNGVKPD 810
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 145/289 (50%), Gaps = 3/289 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G +VSCN +LK L V+++EVA R+L +L G PNVV++ T++ G+ RG+MD A
Sbjct: 247 GFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRA 305
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + +G PD Y+ L+DG+ + G L K+ GV+ + V + I+
Sbjct: 306 FDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDV 365
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSD 378
Y K A + + M+ +G P+ ++ LC++G + A ++ ++L++
Sbjct: 366 YVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPS 425
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
S+LI CK G + ++E+ + G ++ Y L+ GL ++G + A R
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M+ + N +N LI+G+C++ E +++ M G P+ +T+
Sbjct: 486 KMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 143/292 (48%), Gaps = 3/292 (1%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A +FK R G+ P++++ + L+ K + + ++ + L G+ +VV +++ +
Sbjct: 305 AFDLFKVMEQR-GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
Y GD+ A V +L +G +P+ TYT+L+ G C+ GR+ A + + + G++
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGME 423
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P+ VTY +I+ +CK L EDM++ G+ P + +VD L ++G + A
Sbjct: 424 PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRF 483
Query: 368 -WRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCE 425
++L + + V ++LI C+ + EA VF G + T+ T++
Sbjct: 484 SVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIM 543
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCEN 477
G L EA L+ M + G P+A Y LI+ FCK G+++ + M N
Sbjct: 544 EGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN 595
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 139/313 (44%), Gaps = 37/313 (11%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNS 195
T +R + G+ + AL F R+ ++G+ P ++ + + +F +
Sbjct: 534 FTTVMRVSIMEGRLEEALFLFFRM-FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF-DL 591
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
R +S ++ CN+++ L K + +E A + + ++ + P++V+Y T++ GY
Sbjct: 592 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 651
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
+D A R+ + + P+ T T+L+ C+ + AI++ M E G +PN VTYG
Sbjct: 652 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 711
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKIC 375
+++ + K + L E+M KG PS ++D LC+ G V+
Sbjct: 712 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVD------------- 758
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAAR 434
EA N+F + + + ++ Y LI G C+ G L EAA
Sbjct: 759 ---------------------EATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 797
Query: 435 LWDDMVEKGRAPN 447
L++ M+ G P+
Sbjct: 798 LYEHMLRNGVKPD 810
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 64/112 (57%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G PN V+ L+ K ++E + ++ +EM G+ P++VSY+ ++ G RG +D A
Sbjct: 701 GSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
+ + +D PD Y +L+ G+C+ GRLV A + + M NGV+P+++
Sbjct: 761 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 812
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 158/329 (48%), Gaps = 42/329 (12%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+F V + N L+K+ K+ VE + V +M G+ P + +Y +M G +D
Sbjct: 180 KFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVD 239
Query: 258 GAMRVLGEVLDKG-WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
A RV EV++ G PD TY ++ G+C+ G+ A++ + DME G + +++TY M
Sbjct: 240 SAERVF-EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTM 298
Query: 317 IEA-----------------------------------YCKWKKPGEAVNLLEDMVRKGH 341
I+A CK K E + E+M+RKG
Sbjct: 299 IQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS 358
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARN 400
P+ + ++D + G+VE A + R++ + D S +++ LCK G+V EA +
Sbjct: 359 KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Query: 401 VFE--EFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
F F+G ++ S+ Y++LI GL + G + EA RL+++M EKG +++ YN LI+ F
Sbjct: 419 YFHTCRFDGLAINSMF-YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAF 477
Query: 459 CKVGNAKEGIRILEEM-CENGCLPNKSTY 486
K E I + + M E GC TY
Sbjct: 478 TKHRKVDEAIALFKRMEEEEGCDQTVYTY 506
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 147/345 (42%), Gaps = 38/345 (11%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I+GY AG+ A+ +E+R + + +
Sbjct: 262 TMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEK 321
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
V P+ S +++ LCK ++ V + M+ G PNV YT ++ GYA G ++
Sbjct: 322 GIQVPPHAFS--LVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVE 379
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+R+L ++D+G+ PD TY+V+V+G C+ GR+ A+ +G+ N + Y +I
Sbjct: 380 DAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLI 439
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
+ K + EA L E+M KG C
Sbjct: 440 DGLGKAGRVDEAERLFEEMSEKG----------------------------------CTR 465
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFE--EFEGGSVASLLTYNTLIAGLCERGELCEAARL 435
D+ + LI K KV EA +F+ E E G ++ TY L++G+ + EA +L
Sbjct: 466 DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL 525
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL 480
WD M++KG P A + L G C G +IL+E+ G +
Sbjct: 526 WDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVI 570
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 164/350 (46%), Gaps = 5/350 (1%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I+ +G G + L + +++ GI P++ V A VF+ +
Sbjct: 194 IKSFGKLGMVEELLWVWRKMKEN-GIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESG- 251
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
+ P++V+ N ++K CK + + A+ L +M G + ++Y T++ D
Sbjct: 252 RIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSC 311
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + E+ +KG +++++ G C++G+L V ++M G +PN Y V+I+
Sbjct: 312 VALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
Y K +A+ LL M+ +G P VV+ LC+ G VE A + + R + N
Sbjct: 372 YAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAIN 431
Query: 380 TV-ASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
++ S+LI L K G+V EA +FEE E G YN LI + ++ EA L+
Sbjct: 432 SMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFK 491
Query: 438 DM-VEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M E+G +TY +L++G K +E +++ + M + G P + +
Sbjct: 492 RMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACF 541
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 134/302 (44%), Gaps = 2/302 (0%)
Query: 187 LAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTV 246
+A S F SR + + N+ L+ L +V+ V E+ V + +
Sbjct: 134 IAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANAL 193
Query: 247 MGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
+ + G ++ + V ++ + G P TY L++G + +A +V + ME +
Sbjct: 194 IKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRI 253
Query: 307 QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE 366
+P+ VTY MI+ YCK + +A+ L DM +GH ++ + +
Sbjct: 254 KPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVA 313
Query: 367 VWRVL-RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLC 424
+++ + K S +I LCK+GK+ E VFE GS ++ Y LI G
Sbjct: 314 LYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYA 373
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
+ G + +A RL M+++G P+ TY++++NG CK G +E + +G N
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 485 TY 486
Y
Sbjct: 434 FY 435
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 86/202 (42%), Gaps = 2/202 (0%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I G G AG+ D A R F + + R S ++++ A ++FK
Sbjct: 439 IDGLGKAGRVDEAERLFEEMSEKGCTRDSY-CYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G V + ILL + K + E A+++ D M+ G+ P + + G G + A
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++L E+ G DA +++ C+ GR+ A K+ D + E G + VMI A
Sbjct: 558 CKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINA 616
Query: 320 YCKWKKPGEAVNLLEDMVRKGH 341
K K A+ L+ + G+
Sbjct: 617 LRKVGKADLAMKLMHSKIGIGY 638
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 186/423 (43%), Gaps = 42/423 (9%)
Query: 57 LHPKLLASLISRQHDP-HLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESL 115
L P L+ +++R D +L + F A R H Y+++ LS+ R F + L
Sbjct: 111 LRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYC-HSIEVYKSMVKILSKMRQFGAVWGL 169
Query: 116 LSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXX 175
+ + + +PQ + V ++ + A A+ + + G P
Sbjct: 170 IEEMRKENPQLI----EPELFVVLVQRFASADMVKKAIEVLDEM-PKFGFEPDEYVFGCL 224
Query: 176 XXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG 235
++ + A +F++ R RF V N+ LL C+V ++ A VL +M G
Sbjct: 225 LDALCKHGSVKDAAKLFEDMRMRFPV--NLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAG 282
Query: 236 LVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAI 295
P++V YT ++ GYA G M A +L ++ +G+ P+A YTVL+ C+ R+ A+
Sbjct: 283 FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 342
Query: 296 KVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVL 355
KV +ME + + VTY ++ +CKW K + +L+DM++KG +PS ++
Sbjct: 343 KVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAH 402
Query: 356 CEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLT 415
++ + E E+ +R+I E+ +
Sbjct: 403 EKKESFEECLELMEKMRQI-----------------------------EYH----PDIGI 429
Query: 416 YNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMC 475
YN +I C+ GE+ EA RLW++M E G +P T+ ++ING G E +EM
Sbjct: 430 YNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMV 489
Query: 476 ENG 478
G
Sbjct: 490 TRG 492
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 137/279 (49%), Gaps = 3/279 (1%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
+L++ + V+ A+ VLDEM G P+ + ++ G + A ++ E +
Sbjct: 188 VLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLF-EDMRM 246
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
+ + +T L+ G+CR G+++ A V+ M E G +P+ V Y ++ Y K +A
Sbjct: 247 RFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADA 306
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIHW 388
+LL DM R+G P++ ++ LC+ +E A +V+ + R C +D + L+
Sbjct: 307 YDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSG 366
Query: 389 LCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
CK GK+ + V ++ + G + S LTY ++ ++ E L + M + P+
Sbjct: 367 FCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPD 426
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
YN++I CK+G KE +R+ EM ENG P T+
Sbjct: 427 IGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTF 465
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 136/296 (45%), Gaps = 9/296 (3%)
Query: 193 KNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
KNS+ S S IL K +V ++E+A+ L GL+ V++ G +
Sbjct: 72 KNSKYDEFASDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGY 131
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE-V 311
R + A + + Y +V + + A ++++M + Q E
Sbjct: 132 RFFVWAAKQ-------PRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPE 184
Query: 312 TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
+ V+++ + +A+ +L++M + G P + ++D LC+ G+V+ A +++ +
Sbjct: 185 LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDM 244
Query: 372 RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELC 430
R + ++L++ C+ GK++EA+ V + E G ++ Y L++G G++
Sbjct: 245 RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMA 304
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+A L DM +G PNA Y +LI CKV +E +++ EM C + TY
Sbjct: 305 DAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTY 360
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 167/350 (47%), Gaps = 5/350 (1%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I Y G+ DSA+R F ++ ++P+ + + + A +F+ + R
Sbjct: 240 ISSYEKLGRNDSAIRLFDEMKDNC-MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMK-RA 297
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G SP V + L+K L K V+ A +ML GL P+VV +M G ++
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKV-MDDMEENGVQPNEVTYGVMIE 318
V E+ P +Y ++ V+ + D M+ + V P+E TY ++I+
Sbjct: 358 TNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS- 377
YCK + +A+ LLE+M KG P C +++ L + E A E+++ L++ G+
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV 477
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLW 436
+ V + +I K GK+ EA ++F E + GS + YN L++G+ + G + EA L
Sbjct: 478 SSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLL 537
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M E G + ++N+++NGF + G + I + E + +G P+ TY
Sbjct: 538 RKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTY 587
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 194/465 (41%), Gaps = 50/465 (10%)
Query: 56 RLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESL 115
++ +L+ S++ + ++ +Q F+ A R H Y + L AR + EM
Sbjct: 90 KVDHRLVRSILEIDVEINVKIQFFKWA-GKRRNFQHDCSTYMTLIRCLEEARLYGEMYRT 148
Query: 116 LSTLPRHSPQQFLDHCGEDPLVTA--IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXX 173
+ + R++ + P V + ++ G A AL F + + R +P+
Sbjct: 149 IQEVVRNT------YVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGR-KCKPTSSTYN 201
Query: 174 XXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLG 233
+Q +H H V+ P+ ++ + L+ + K+ + A+R+ DEM
Sbjct: 202 SVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKD 261
Query: 234 MGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVA 293
+ P YTT++G Y G ++ A+ + E+ G +P TYT L+ G + GR+
Sbjct: 262 NCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDE 321
Query: 294 AIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDM----------------- 336
A DM +G+ P+ V ++ K + E N+ +M
Sbjct: 322 AYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIK 381
Query: 337 ---VRKGHV----------------PSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
K HV PS ++D C+ VE+A + + +
Sbjct: 382 ALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFP 441
Query: 378 DNTVAS-TLIHWLCKKGKVLEARNVFEEFEG--GSVASLLTYNTLIAGLCERGELCEAAR 434
A +LI+ L K + A +F+E + G+V+S + Y +I + G+L EA
Sbjct: 442 PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRV-YAVMIKHFGKCGKLSEAVD 500
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
L+++M +G P+ + YN L++G K G E +L +M ENGC
Sbjct: 501 LFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGC 545
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 179/413 (43%), Gaps = 54/413 (13%)
Query: 108 CFPE---MESLLST---LPRHSP-----QQFLDHCGE--DPLVTAIRG-YGLAGKPDSAL 153
CFP+ +L+S+ L R+ + D+C + + + T + G Y GK + AL
Sbjct: 229 CFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKAL 288
Query: 154 RTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLK 213
F ++ R G P+V + R A+ +K+ R G++P+VV N L+
Sbjct: 289 DLFEEMK-RAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKD-MLRDGLTPDVVFLNNLMN 346
Query: 214 ALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGG-YAWRGDMDGAMRVLGEVLDKGWA 272
L KV VE V EM P VVSY TV+ + + + ++ +
Sbjct: 347 ILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVS 406
Query: 273 PDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQP---------------------NEV 311
P TY++L+DG+C+ R+ A+ ++++M+E G P NE+
Sbjct: 407 PSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANEL 466
Query: 312 --------------TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCE 357
Y VMI+ + K K EAV+L +M +G P ++ + +
Sbjct: 467 FKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVK 526
Query: 358 EGNVERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLT 415
G + A + R + + C +D + +++ + G A +FE + G +T
Sbjct: 527 AGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVT 586
Query: 416 YNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGI 468
YNTL+ G EAAR+ +M +KG +A TY+ +++ V + K+ +
Sbjct: 587 YNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKDDV 639
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 175/406 (43%), Gaps = 46/406 (11%)
Query: 71 DPHLSLQIFRHAQTHHRASSHHPLP-YRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLD 129
DP +L +F Q H P Y ++ KL+++R F ++ +L + + +
Sbjct: 61 DPEEALSLFHQYQ---EMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVR---- 113
Query: 130 HCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAH 189
C E + I+ YG AG D A+ F +I S +R +++ V N A
Sbjct: 114 -CRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVR-TIQSLNTLINVLVDNGELEKAK 171
Query: 190 SVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGG 249
S F ++ + PN VS NIL+K + E A +V DEML M + P+VV+Y +++G
Sbjct: 172 SFFDGAKD-MRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGF 230
Query: 250 YAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
DM A +L +++ K P+A T+ +L+ G C +G A K+M DME G +P
Sbjct: 231 LCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPG 290
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
V YG+++ K + EA LL +M ++ P
Sbjct: 291 LVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKP-------------------------- 324
Query: 370 VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGE 428
D + + L++ LC + +V EA V E + G + TY +I G C +
Sbjct: 325 --------DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIED 376
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+ + M+ P T+ ++ G K GN +LE M
Sbjct: 377 FDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 35/277 (12%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
L++ K V+ A+ V ++ V + S T++ G+++ A D
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
P++ ++ +L+ GF + AA KV D+M E VQP+ VTY +I C+ G+A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLC 390
+LLEDM++K P++ L+ LC
Sbjct: 242 SLLEDMIKKRIRPNA----------------------------------VTFGLLMKGLC 267
Query: 391 KKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAF 449
KG+ EA+ + + E G L+ Y L++ L +RG + EA L +M ++ P+
Sbjct: 268 CKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVV 327
Query: 450 TYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
YN+L+N C E R+L EM GC PN +TY
Sbjct: 328 IYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATY 364
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ PN V+ +L+K LC E A +++ +M G P +V+Y +M RG +D A
Sbjct: 252 IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAK 311
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+LGE+ + PD Y +LV+ C + R+ A +V+ +M+ G +PN TY +MI+ +
Sbjct: 312 LLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGF 371
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
C+ + +N+L M+ H P+ +V L + GN++ AC V V+ K
Sbjct: 372 CRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGK 424
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 109/234 (46%), Gaps = 2/234 (0%)
Query: 255 DMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYG 314
D + A+ + + + G+ D +Y+ L+ + A +++ + V+ E +
Sbjct: 61 DPEEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFM 120
Query: 315 VMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI 374
+I+ Y K +A+++ + V + +++VL + G +E+A + + +
Sbjct: 121 GLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 375 CGSDNTVA-STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEA 432
N+V+ + LI K A VF+E E S++TYN+LI LC ++ +A
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 433 ARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L +DM++K PNA T+ LL+ G C G E +++ +M GC P Y
Sbjct: 241 KSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNY 294
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 155/293 (52%), Gaps = 5/293 (1%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G NV + N+++ + CK +++ A+ V ML G+ PNVVS+ ++ G GDM
Sbjct: 212 LGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRF 271
Query: 259 AMRVLGEV-LDKG--WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
A+++LG++ + G +P+A TY +++GFC+ GRL A ++ DM ++GV NE TYG
Sbjct: 272 ALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGA 331
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KI 374
+++AY + EA+ L ++M KG V ++ + +V L EG++E A V R + K
Sbjct: 332 LVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKN 391
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAA 433
D + ++ LC+ G V EA + E V ++ +NTL+ +L A
Sbjct: 392 MQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACAD 451
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ M+ +G + +A ++ LI+G+ K G + + I + M + N Y
Sbjct: 452 QILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIY 504
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 146/290 (50%), Gaps = 6/290 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV N + L+ A + + A+R+ DEM GLV N V Y +++ GD++GA
Sbjct: 321 GVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGA 380
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
M VL ++ K D T ++V G CR G + A++ + E + + V + ++
Sbjct: 381 MSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHH 440
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+ + KK A +L M+ +G + ++D +EG +ERA E++ + K+ + N
Sbjct: 441 FVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSN 500
Query: 380 TVA-STLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
V +++++ L K+G A V E + ++TYNTL+ + G + EA +
Sbjct: 501 LVIYNSIVNGLSKRGMAGAAEAVVNAME---IKDIVTYNTLLNESLKTGNVEEADDILSK 557
Query: 439 MVEKG--RAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M ++ ++ + T+N++IN CK G+ ++ +L+ M E G +P+ TY
Sbjct: 558 MQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITY 607
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 130/282 (46%), Gaps = 7/282 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G SP+V L++A + + + A V+++ G +V + MG ++D
Sbjct: 145 GSSPDVFDS--LVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRF 202
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+V E+ G+ + T+ +++ FC++ +L A+ V M + GV PN V++ +MI+
Sbjct: 203 WKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDG 262
Query: 320 YCKWKKPGEAVNLLEDM-VRKGHV--PSSGLCCKVVDVLCEEGNVERACEV-WRVLRKIC 375
CK A+ LL M + G+ P++ V++ C+ G ++ A + +++
Sbjct: 263 ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGV 322
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAAR 434
+ L+ + G EA + +E G V + + YN+++ L G++ A
Sbjct: 323 DCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMS 382
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE 476
+ DM K + FT +++ G C+ G KE + ++ E
Sbjct: 383 VLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISE 424
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 84/195 (43%), Gaps = 35/195 (17%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+S + +S L+ K ++E A+ + D M+ M N+V Y +++ G + RG M GA
Sbjct: 461 GLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRG-MAGA 519
Query: 260 MR----------------VLGEVLDKGWAPDA------------------TTYTVLVDGF 285
+L E L G +A T+ ++++
Sbjct: 520 AEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHL 579
Query: 286 CRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSS 345
C+ G A +V+ M E GV P+ +TYG +I ++ K + + V L + ++ +G P
Sbjct: 580 CKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHE 639
Query: 346 GLCCKVVDVLCEEGN 360
+ +V L + N
Sbjct: 640 HIYLSIVRPLLDREN 654
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 130/535 (24%), Positives = 220/535 (41%), Gaps = 88/535 (16%)
Query: 60 KLLASLISR-QHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLST 118
+LL S++ R + +P L+IF A + + + + + LSRAR + + +S L
Sbjct: 71 ELLNSILRRLRLNPEACLEIFNLASKQQKFRPDYKAYCKMVHI-LSRARNYQQTKSYLCE 129
Query: 119 LPRHSPQQF---------LDHCGEDPLV--TAIRGYGLAGKPDSALRTFLRIESRLGIRP 167
L + F P V ++ Y G +AL F + G P
Sbjct: 130 LVALNHSGFVVWGELVRVFKEFSFSPTVFDMILKVYAEKGLVKNALHVFDNM-GNYGRIP 188
Query: 168 SVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRV 227
S+ V+ + +A V+ + F VSP+V +C+I++ A C+ V+ A+
Sbjct: 189 SLLSCNSLLSNLVRKGENFVALHVY-DQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVF 247
Query: 228 LDEM-LGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYT------- 279
E +GL NVV+Y +++ GYA GD++G RVL + ++G + + TYT
Sbjct: 248 AKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYC 307
Query: 280 ----------------------------VLVDGFCRQGRLVAAIKVMDDMEENGV----- 306
VL+DG+CR G++ A++V D+M E GV
Sbjct: 308 KKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTT 367
Query: 307 ------------------------------QPNEVTYGVMIEAYCKWKKPGEAVNLLEDM 336
+P+ TY +++ YC+ EA+ L + M
Sbjct: 368 ICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Query: 337 VRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSDNTVASTLIHWLCKKGKV 395
+K VP+ ++ G +W+ +L++ +D STL+ L K G
Sbjct: 428 CQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDF 487
Query: 396 LEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLL 454
EA ++E G + +T N +I+GLC+ ++ EA + D++ P TY L
Sbjct: 488 NEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQAL 547
Query: 455 INGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXMNQEINKVVAL 509
+G+ KVGN KE + E M G P Y +N+ + V+ L
Sbjct: 548 SHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 602
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 138/328 (42%), Gaps = 41/328 (12%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ + ++ N+++ LCK+ +V A +LD + P V +Y + GY G++ A
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
V + KG P Y L+ G + L ++ ++ G+ P TYG +I
Sbjct: 561 FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITG 620
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-------- 371
+C +A +M+ KG + +C K+ + L ++ AC + + +
Sbjct: 621 WCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLP 680
Query: 372 -------------------------------RKICGSDNTVASTLIHWLCKKGKVLEARN 400
+K+ +N V + I LCK GK+ +AR
Sbjct: 681 GYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARK 740
Query: 401 VFEEFEGGS--VASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
+F + + TY LI G G++ +A L D+M KG PN TYN LI G
Sbjct: 741 LFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGL 800
Query: 459 CKVGNAKEGIRILEEMCENGCLPNKSTY 486
CK+GN R+L ++ + G PN TY
Sbjct: 801 CKLGNVDRAQRLLHKLPQKGITPNAITY 828
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 88/164 (53%), Gaps = 2/164 (1%)
Query: 183 KRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG-LVPNVV 241
K ++A SV +NS + + PN + N+ + LCK ++E A ++ ++L +P+
Sbjct: 698 KTQKIAESV-ENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEY 756
Query: 242 SYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
+YT ++ G A GD++ A + E+ KG P+ TY L+ G C+ G + A +++ +
Sbjct: 757 TYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKL 816
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSS 345
+ G+ PN +TY +I+ K EA+ L E M+ KG V S
Sbjct: 817 PQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGLVRGS 860
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 136/328 (41%), Gaps = 43/328 (13%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
V P V++ NILLK ++ + + ML G+ + +S +T++ GD + AM
Sbjct: 432 VVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAM 491
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
++ VL +G D T V++ G C+ ++ A +++D++ +P TY + Y
Sbjct: 492 KLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGY 551
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
K EA + E M RKG P+ + ++ + ++ + ++ LR G T
Sbjct: 552 YKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRAR-GLTPT 610
Query: 381 VAS--TLIHWLCKKGKVLEAR-NVFEEFEGGS--------------------------VA 411
VA+ LI C G + +A FE E G +
Sbjct: 611 VATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQ 670
Query: 412 SLLTYNTLIAGLCERGELCEAA------------RLWDDMVEKGRAPNAFTYNLLINGFC 459
++ ++ L+ G E EA+ + + +K PN YN+ I G C
Sbjct: 671 KIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLC 730
Query: 460 KVGNAKEGIRILEEMCENG-CLPNKSTY 486
K G ++ ++ ++ + +P++ TY
Sbjct: 731 KAGKLEDARKLFSDLLSSDRFIPDEYTY 758
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 147/293 (50%), Gaps = 8/293 (2%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G P+VV+ +++ LC V A+ VL+ + G +VV+ T++ GY G M
Sbjct: 277 LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRV 336
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A R E+ KG+ P+ TY +L+ G+C G L +A+ +DM+ + ++ N T+ +I
Sbjct: 337 AQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIR 396
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGL----CCKVVDVLCEEGNVERACEVWRVLRKI 374
+ + + +LE M V + + C V+ +E E A E + K+
Sbjct: 397 GLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNC--VIYGFYKENRWEDALEFLLKMEKL 454
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAA 433
+ LI LC+KG + + + +++ G G V S++ + LI + G++ E+
Sbjct: 455 FPRAVDRSFKLIS-LCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESL 513
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L +DMV +G P + T+N +I GFCK GI+ +E+M E GC+P+ +Y
Sbjct: 514 ELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESY 566
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 180/418 (43%), Gaps = 54/418 (12%)
Query: 62 LASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPR 121
+ LI Q +L+ FR A T H YRA+F KL R F + LL +P
Sbjct: 46 IVRLILDQKSASGALETFRWASTFP-GFIHSRSTYRALFHKLCVFRRFDTVYQLLDEMP- 103
Query: 122 HSPQQFLDHCGEDP----LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXX 177
D G P VT IRG+G A + + + + S+ GI+PS++
Sbjct: 104 -------DSIGLPPDDAIFVTIIRGFGRARLIKRVI-SVVDLVSKFGIKPSLKVFNSILD 155
Query: 178 XXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLV 237
V+ +A F G+ +V + IL+K L N + ++L M G+
Sbjct: 156 VLVKEDID-IAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVA 214
Query: 238 PNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKV 297
PN V Y T++ G + A ++ E+ + P+ T+ +L+ +C + +L+ ++ +
Sbjct: 215 PNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVL 270
Query: 298 MDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCE 357
++ G P+ VT ++E C + EA+ +LE + KG VDV+
Sbjct: 271 LEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG---------KVDVV-- 319
Query: 358 EGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTY 416
AC +TL+ C GK+ A+ F E E G + ++ TY
Sbjct: 320 ------AC-----------------NTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 417 NTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
N LIAG C+ G L A ++DM N T+N LI G G +G++ILE M
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMM 414
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 126/278 (45%), Gaps = 5/278 (1%)
Query: 211 LLKALCKVNEVEVAVRVLDEM-LGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
L LC + ++LDEM +GL P+ + T++ G+ + + V+ V
Sbjct: 82 LFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKF 141
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G P + ++D ++ +A M +G+ + TYG++++ + G+
Sbjct: 142 GIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDG 201
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWL 389
LL+ M G P++ + ++ LC+ G V RA + +++ ++ + LI
Sbjct: 202 FKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE---PNDVTFNILISAY 258
Query: 390 CKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
C + K++++ + E+ F G V ++T ++ LC G + EA + + + KG +
Sbjct: 259 CNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDV 318
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
N L+ G+C +G + R EM G LPN TY
Sbjct: 319 VACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 139/335 (41%), Gaps = 42/335 (12%)
Query: 163 LGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVE 222
LG P V R A V + ++ G +VV+CN L+K C + ++
Sbjct: 277 LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESK-GGKVDVVACNTLVKGYCALGKMR 335
Query: 223 VAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLV 282
VA R EM G +PNV +Y ++ GY G +D A+ ++ + T+ L+
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Query: 283 DGFCRQGRLVAAIKVMDDMEENG------VQP-NEVTYGVMIE----------------- 318
G GR +K+++ M+++ + P N V YG E
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKLF 455
Query: 319 -----------AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
+ C+ + + M+ +G VPS + ++ + G +E + E+
Sbjct: 456 PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLEL 515
Query: 368 WR--VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLC 424
V R +T + +I + CK+ KV+ E+ E G V +YN L+ LC
Sbjct: 516 INDMVTRGYLPRSSTFNAVIIGF-CKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELC 574
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFC 459
+G++ +A L+ MVEK P+ ++ L+ FC
Sbjct: 575 VKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--FC 607
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
N ++ K N E A+ L +M L P V + + +G MD +++
Sbjct: 429 NCVIYGFYKENRWEDALEFLLKM--EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIG 486
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
+G P L+ + + G++ ++++++DM G P T+ +I +CK K
Sbjct: 487 EGGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMN 546
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIH 387
+ +EDM +G VP + +++ LC +G++++A ++ R++ K D ++ S+L+
Sbjct: 547 GIKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMF 606
Query: 388 WLCKKGKV 395
L +K +
Sbjct: 607 CLSQKTAI 614
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 158/359 (44%), Gaps = 7/359 (1%)
Query: 129 DHCGEDPLV--TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHR 186
D C DP+V ++GY G + R F + G SV ++
Sbjct: 160 DECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDS-GFSVSVVTCNHLLNGLLKLDLME 218
Query: 187 LAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTV 246
V+ + R G+ PN + NIL C + L++M G P++V+Y T+
Sbjct: 219 DCWQVY-SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTL 277
Query: 247 MGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
+ Y RG + A + + + PD TYT L+ G C+ GR+ A + M + G+
Sbjct: 278 VSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGI 337
Query: 307 QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE 366
+P+ ++Y +I AYCK ++ LL +M+ VP C +V+ EG + A
Sbjct: 338 KPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVN 397
Query: 367 VWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEF--EGGSVASLLTYNTLIAGL 423
LR++ V LI LC++GK A+++ + E G A TYN LI L
Sbjct: 398 FVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESL 457
Query: 424 CERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
+ EA L + + + +A TY LI C++G +E ++ EM ++ P+
Sbjct: 458 SRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPD 516
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/357 (23%), Positives = 150/357 (42%), Gaps = 54/357 (15%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG-----------L 236
A + FK + G PNV + +LL L + +A++ L E++ + L
Sbjct: 96 AITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVL 155
Query: 237 VP-------NVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQG 289
V + V + ++ GY G ++ RV EVLD G++ T L++G +
Sbjct: 156 VSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLD 215
Query: 290 RLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCC 349
+ +V M G+ PN T+ ++ +C E + LE M +G P
Sbjct: 216 LMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEP------ 269
Query: 350 KVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFE-EFEGG 408
D +TL+ C++G++ EA +++ +
Sbjct: 270 ----------------------------DLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRR 301
Query: 409 SVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGI 468
V L+TY +LI GLC+ G + EA + + MV++G P+ +YN LI +CK G ++
Sbjct: 302 VVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSK 361
Query: 469 RILEEMCENGCLPNKSTYXXXXXXXXXXXXMNQEINKVVAL-AMSTGVDGELWDLLV 524
++L EM N +P++ T + +N VV L + + E+ D L+
Sbjct: 362 KLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLI 418
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 5/155 (3%)
Query: 208 CNILLKALCKVNEVEVAVRVLDEML---GMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLG 264
C+ L+ +LC+ + A +LD ++ G P +Y ++ + ++ A+ + G
Sbjct: 414 CDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSRCDAIEEALVLKG 471
Query: 265 EVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWK 324
++ ++ DA TY L+ CR GR A +M +M ++ V+P+ G ++ YCK
Sbjct: 472 KLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKEL 531
Query: 325 KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEG 359
+A LL + + +V +CE G
Sbjct: 532 DFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETG 566
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 174/416 (41%), Gaps = 44/416 (10%)
Query: 73 HLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCG 132
H SL F A + P PY + + R F L+ + + + ++
Sbjct: 131 HQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIE--- 187
Query: 133 EDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVF 192
IR Y AG A+ F R+E G P + +R A S F
Sbjct: 188 --TFTILIRRYVRAGLASEAVHCFNRMED-YGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 193 KNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
+ + RF P+V+ L++ C+ E+ A +V EM G+ PNV +Y+ V+
Sbjct: 245 DSLKDRF--EPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCR 302
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
G + A V ++LD G AP+A T+ L+ + GR ++V + M++ G +P+ +T
Sbjct: 303 CGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTIT 362
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR 372
Y +IEA+C+ + AV +L M++K CEV
Sbjct: 363 YNFLIEAHCRDENLENAVKVLNTMIKKK------------------------CEV----- 393
Query: 373 KICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCE 431
+ + +T+ ++ KK V A ++ + E + +TYN L+
Sbjct: 394 -----NASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDM 448
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL-PNKSTY 486
++ +M +K PN TY LL+ FC +G+ ++ +EM E CL P+ S Y
Sbjct: 449 VLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLY 504
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 156/345 (45%), Gaps = 36/345 (10%)
Query: 143 YGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVS 202
+G G P + + + + GI P + H+ A VF+ + G S
Sbjct: 253 FGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAA-GFS 311
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
+ V+ N LL K + + A++VL+EM+ G P++V+Y +++ YA G +D AM +
Sbjct: 312 YDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMEL 371
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
++ +KG PD TYT L+ GF R G++ +A+ + ++M G +PN T+ I+ Y
Sbjct: 372 KNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGN 431
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
K E + + +++ +C D++ W L + G
Sbjct: 432 RGKFTEMMKIFDEI---------NVCGLSPDIV-----------TWNTLLAVFG------ 465
Query: 383 STLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+ G E VF+E + G V T+NTLI+ G +A ++ M++
Sbjct: 466 --------QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G P+ TYN ++ + G ++ ++L EM + C PN+ TY
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 139/299 (46%), Gaps = 14/299 (4%)
Query: 199 FGVSPNVVSCNIL--LKALCKVNEVEVAVRVLDEMLGMG-----LVPNVVSYTTVMGGYA 251
F P S +L LK L + ++A+R D + L +VV+ M G
Sbjct: 127 FKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGK- 185
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
G + A + + + G++ D +YT L+ F GR A+ V MEE+G +P +
Sbjct: 186 -EGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLI 244
Query: 312 TYGVMIEAYCKWKKP-GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV-ERACEVWR 369
TY V++ + K P + +L+E M G P + ++ C+ G++ + A +V+
Sbjct: 245 TYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFE 303
Query: 370 VLRKICGS-DNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERG 427
++ S D + L+ K + EA V E G S++TYN+LI+ G
Sbjct: 304 EMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDG 363
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L EA L + M EKG P+ FTY L++GF + G + + I EEM GC PN T+
Sbjct: 364 MLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTF 422
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 163/355 (45%), Gaps = 10/355 (2%)
Query: 137 VTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSR 196
T + G+ AGK +SA+ F + + G +P++ + +F
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRN-AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
G+SP++V+ N LL + V EM G VP ++ T++ Y+ G
Sbjct: 447 V-CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSF 505
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
+ AM V +LD G PD +TY ++ R G + KV+ +ME+ +PNE+TY +
Sbjct: 506 EQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSL 565
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV----ERACEVWRVLR 372
+ AY K+ G +L E+ V G + + K + ++C + ++ ERA +
Sbjct: 566 LHAYANGKEIGLMHSLAEE-VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELK--E 622
Query: 373 KICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCE 431
+ D T ++++ ++ V +A V + E G S+ TYN+L+ + +
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ + +++ KG P+ +YN +I +C+ ++ RI EM +G +P+ TY
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITY 737
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 153/372 (41%), Gaps = 39/372 (10%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I+ YG GK ++ F I + G+ P + QN VFK + R
Sbjct: 426 IKMYGNRGKFTEMMKIFDEI-NVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK-RA 483
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P + N L+ A + E A+ V ML G+ P++ +Y TV+ A G + +
Sbjct: 484 GFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQS 543
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGF---------------------------------- 285
+VL E+ D P+ TY L+ +
Sbjct: 544 EKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLV 603
Query: 286 CRQGRLV-AAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS 344
C + L+ A + +++E G P+ T M+ Y + + +A +L+ M +G PS
Sbjct: 604 CSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 345 SGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFE 403
++ + + ++ E+ R +L K D +T+I+ C+ ++ +A +F
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 404 EF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
E G V ++TYNT I EA + M++ G PN TYN +++G+CK+
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLN 783
Query: 463 NAKEGIRILEEM 474
E +E++
Sbjct: 784 RKDEAKLFVEDL 795
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 156/366 (42%), Gaps = 44/366 (12%)
Query: 165 IRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSC-----NILLKALCKVN 219
IRP V +++R A VF+ R + NV+ N L+ LCKV
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 220 EVEVAVRVLDEM-LGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTY 278
++ A +L M L VPN V+Y ++ GY G ++ A V+ + + P+ T
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 279 TVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVR 338
+V G CR L A+ DME+ GV+ N VTY +I A C +A+ E M+
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 339 KGHVPS--------SGLC--------CKVVD-------------------VLCEEGNVER 363
G P SGLC +VV+ + C++ N E+
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEK 564
Query: 364 ACEVWRVLRKICGS-DNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIA 421
E+ + K D+ +TLI + K + E+ E G ++ TY +I
Sbjct: 565 VYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVID 624
Query: 422 GLCERGELCEAARLWDDM-VEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL 480
C GEL EA +L+ DM + PN YN+LIN F K+GN + + + EEM
Sbjct: 625 AYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR 684
Query: 481 PNKSTY 486
PN TY
Sbjct: 685 PNVETY 690
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 152/320 (47%), Gaps = 7/320 (2%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I GY AGK ++A R++ I+P+V ++ +A VF +
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKED-EIKPNVVTVNTIVGGMCRHHGLNMA-VVFFMDMEKE 470
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW-RGDMDG 258
GV NVV+ L+ A C V+ VE A+ ++ML G P+ Y ++ G R D D
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD- 529
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+RV+ ++ + G++ D Y +L+ FC + +++ DME+ G +P+ +TY +I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV--LRKICG 376
+ K K ++E M G P+ V+D C G ++ A ++++ L
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARL 435
+ + + LI+ K G +A ++ EE + V ++ TYN L L E+ + +L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 436 WDDMVEKGRAPNAFTYNLLI 455
D+MVE+ PN T +L+
Sbjct: 710 MDEMVEQSCEPNQITMEILM 729
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 149/372 (40%), Gaps = 82/372 (22%)
Query: 197 TRF---GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLG-------------------- 233
+RF GVSPN V + +LCK A +L +++
Sbjct: 248 SRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 234 ---------------MGLVPNVVSYTTVMGGYAWRGDMDGAMRVL----GEVLDKG--WA 272
+ + P+VV+ ++ +D A+ V G+ D G
Sbjct: 308 MDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIK 367
Query: 273 PDATTYTVLVDG------------------------------------FCRQGRLVAAIK 296
D+ + L+DG +CR G+L A +
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 297 VMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC 356
V+ M+E+ ++PN VT ++ C+ AV DM ++G + ++ C
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 357 EEGNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLL 414
NVE+A + ++L C D + LI LC+ + +A V E+ EGG LL
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
YN LI C++ + + DM ++G+ P++ TYN LI+ F K + + R++E+M
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 475 CENGCLPNKSTY 486
E+G P +TY
Sbjct: 608 REDGLDPTVTTY 619
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 15/297 (5%)
Query: 203 PNVVSCNILLKALCKVNEV--EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
PN ++ +I+L + K + E + ++ G+ PN V T + + A
Sbjct: 220 PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAW 279
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+L +++ +A + L+ R + ++ M+E ++P+ VT G++I
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL 339
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCK--------VVDVLCEEGNVERACE--VWRV 370
CK ++ EA+ + E M +G G K ++D LC+ G ++ A E V
Sbjct: 340 CKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK 397
Query: 371 LRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGEL 429
L + C + + LI C+ GK+ A+ V + + +++T NT++ G+C L
Sbjct: 398 LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A + DM ++G N TY LI+ C V N ++ + E+M E GC P+ Y
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEM-LGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G+ P V + ++ A C V E++ A+++ +M L + PN V Y ++ ++ G+
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+ + E+ K P+ TY L + + +K+MD+M E +PN++T +++E
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 143/300 (47%), Gaps = 5/300 (1%)
Query: 191 VFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY 250
V + + G+ N + N L+ A K N +E + EM GL P+ +Y +M Y
Sbjct: 365 VIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAY 424
Query: 251 AWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLV-AAIKVMDDMEENGVQPN 309
A R D +L E+ D G P+ +YT L+ + R ++ A M++ G++P+
Sbjct: 425 ARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPS 484
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
+Y +I AY +A E+M ++G PS V+D G+ + E+W+
Sbjct: 485 SHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWK 544
Query: 370 VL--RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCER 426
++ KI G+ T +TL+ K+G +EAR+V EF G S++TYN L+
Sbjct: 545 LMLREKIKGTRITY-NTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARG 603
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G+ + +L +M P++ TY+ +I F +V + K + M ++G +P+ +Y
Sbjct: 604 GQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSY 663
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 100/224 (44%), Gaps = 3/224 (1%)
Query: 142 GYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKR-HRLAHSVFKNSRTRFG 200
Y +PD + T LR LG+ P+V+ + K+ +A F + + G
Sbjct: 423 AYARRMQPD-IVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMK-KVG 480
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ P+ S L+ A E A +EM G+ P+V +YT+V+ + GD M
Sbjct: 481 LKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLM 540
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+ +L + TY L+DGF +QG + A V+ + + G+QP+ +TY +++ AY
Sbjct: 541 EIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAY 600
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
+ + + LL++M P S ++ + +RA
Sbjct: 601 ARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRA 644
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 102/221 (46%), Gaps = 7/221 (3%)
Query: 128 LDHCGEDPLVTA----IRGYGLAGK-PDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQN 182
++ G +P V + I YG K D A FLR++ ++G++PS +
Sbjct: 440 MEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMK-KVGLKPSSHSYTALIHAYSVS 498
Query: 183 KRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVS 242
H A++ F+ + G+ P+V + +L A + + + + ML + ++
Sbjct: 499 GWHEKAYASFEE-MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRIT 557
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
Y T++ G+A +G A V+ E G P TY +L++ + R G+ +++ +M
Sbjct: 558 YNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMA 617
Query: 303 ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVP 343
++P+ +TY MI A+ + + A + MV+ G VP
Sbjct: 618 ALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVP 658
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 108/265 (40%), Gaps = 42/265 (15%)
Query: 262 VLGEVLDKG--WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ ++ +KG W+ D + LV FC +G A+ + +ME+ G++ N + Y +++A
Sbjct: 331 IFEKMSEKGVKWSQDV--FGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDA 388
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCE-------------------EGN 360
Y K E L +M KG PS+ ++D E N
Sbjct: 389 YNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPN 448
Query: 361 V-----------------ERACEVWRVLRKICGSDNTVAST-LIHWLCKKGKVLEARNVF 402
V + A + + ++K+ ++ + T LIH G +A F
Sbjct: 449 VKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASF 508
Query: 403 EEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKV 461
EE + G S+ TY +++ G+ + +W M+ + TYN L++GF K
Sbjct: 509 EEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQ 568
Query: 462 GNAKEGIRILEEMCENGCLPNKSTY 486
G E ++ E + G P+ TY
Sbjct: 569 GLYIEARDVVSEFSKMGLQPSVMTY 593
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 125/285 (43%), Gaps = 6/285 (2%)
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+C++L L + + + +L + +V Y + G + D A V E
Sbjct: 240 ACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVY-EA 298
Query: 267 LDK-GWAPDATTYTVLVDGFCRQGRLVAAI-KVMDDMEENGVQPNEVTYGVMIEAYCKWK 324
+DK PD T +L+ + GR + ++ + M E GV+ ++ +G +++++C
Sbjct: 299 MDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEG 358
Query: 325 KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICGSDNTVAS 383
EA+ + +M +KG ++ + ++D + ++E ++ +R K +
Sbjct: 359 LKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYN 418
Query: 384 TLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCE-AARLWDDMVE 441
L+ ++ + + E E G ++ +Y LI+ ++ + AA + M +
Sbjct: 419 ILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKK 478
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G P++ +Y LI+ + G ++ EEMC+ G P+ TY
Sbjct: 479 VGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETY 523
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 156/366 (42%), Gaps = 44/366 (12%)
Query: 165 IRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSC-----NILLKALCKVN 219
IRP V +++R A VF+ R + NV+ N L+ LCKV
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 220 EVEVAVRVLDEM-LGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTY 278
++ A +L M L VPN V+Y ++ GY G ++ A V+ + + P+ T
Sbjct: 385 RLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 279 TVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVR 338
+V G CR L A+ DME+ GV+ N VTY +I A C +A+ E M+
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 339 KGHVPS--------SGLC--------CKVVD-------------------VLCEEGNVER 363
G P SGLC +VV+ + C++ N E+
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEK 564
Query: 364 ACEVWRVLRKICGS-DNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIA 421
E+ + K D+ +TLI + K + E+ E G ++ TY +I
Sbjct: 565 VYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVID 624
Query: 422 GLCERGELCEAARLWDDM-VEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL 480
C GEL EA +L+ DM + PN YN+LIN F K+GN + + + EEM
Sbjct: 625 AYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR 684
Query: 481 PNKSTY 486
PN TY
Sbjct: 685 PNVETY 690
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 136/280 (48%), Gaps = 5/280 (1%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ PNVV+ N ++ +C+ + + +AV +M G+ NVV+Y T++ +++ AM
Sbjct: 437 IKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAM 496
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
++L+ G +PDA Y L+ G C+ R AI+V++ ++E G + + Y ++I +
Sbjct: 497 YWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
C + +L DM ++G P S ++ + + E + +R+ G D T
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMRE-DGLDPT 615
Query: 381 VAS--TLIHWLCKKGKVLEARNVFEEFEGGSVAS--LLTYNTLIAGLCERGELCEAARLW 436
V + +I C G++ EA +F++ S + + YN LI + G +A L
Sbjct: 616 VTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLK 675
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE 476
++M K PN TYN L + + +++++EM E
Sbjct: 676 EEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 145/306 (47%), Gaps = 7/306 (2%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I GY AGK ++A R++ I+P+V ++ +A VF +
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKED-EIKPNVVTVNTIVGGMCRHHGLNMA-VVFFMDMEKE 470
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW-RGDMDG 258
GV NVV+ L+ A C V+ VE A+ ++ML G P+ Y ++ G R D D
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD- 529
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+RV+ ++ + G++ D Y +L+ FC + +++ DME+ G +P+ +TY +I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV--LRKICG 376
+ K K ++E M G P+ V+D C G ++ A ++++ L
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARL 435
+ + + LI+ K G +A ++ EE + V ++ TYN L L E+ + +L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 436 WDDMVE 441
D+MVE
Sbjct: 710 MDEMVE 715
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 149/372 (40%), Gaps = 82/372 (22%)
Query: 197 TRF---GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLG-------------------- 233
+RF GVSPN V + +LCK A +L +++
Sbjct: 248 SRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 234 ---------------MGLVPNVVSYTTVMGGYAWRGDMDGAMRVL----GEVLDKG--WA 272
+ + P+VV+ ++ +D A+ V G+ D G
Sbjct: 308 MDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIK 367
Query: 273 PDATTYTVLVDG------------------------------------FCRQGRLVAAIK 296
D+ + L+DG +CR G+L A +
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 297 VMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC 356
V+ M+E+ ++PN VT ++ C+ AV DM ++G + ++ C
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 357 EEGNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLL 414
NVE+A + ++L C D + LI LC+ + +A V E+ EGG LL
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
YN LI C++ + + DM ++G+ P++ TYN LI+ F K + + R++E+M
Sbjct: 548 AYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 475 CENGCLPNKSTY 486
E+G P +TY
Sbjct: 608 REDGLDPTVTTY 619
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 134/297 (45%), Gaps = 15/297 (5%)
Query: 203 PNVVSCNILLKALCKVNEV--EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
PN ++ +I+L + K + E + ++ G+ PN V T + + A
Sbjct: 220 PNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAW 279
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+L +++ +A + L+ R + ++ M+E ++P+ VT G++I
Sbjct: 280 DILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTL 339
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCK--------VVDVLCEEGNVERACE--VWRV 370
CK ++ EA+ + E M +G G K ++D LC+ G ++ A E V
Sbjct: 340 CKSRRVDEALEVFEQM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMK 397
Query: 371 LRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGEL 429
L + C + + LI C+ GK+ A+ V + + +++T NT++ G+C L
Sbjct: 398 LEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGL 457
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A + DM ++G N TY LI+ C V N ++ + E+M E GC P+ Y
Sbjct: 458 NMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 144/308 (46%), Gaps = 7/308 (2%)
Query: 184 RHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSY 243
+ LA +F +R V V N ++ + + A ++D M G VP+++S+
Sbjct: 206 QESLAVEIF--TRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISF 263
Query: 244 TTVMGGYAWRGDM--DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
T++ G + + A+ +L V + G PDA TY L+ R L A+KV +DM
Sbjct: 264 NTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM 323
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
E + QP+ TY MI Y + EA L ++ KG P + ++ E N
Sbjct: 324 EAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNT 383
Query: 362 ERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG--GSVASLLTYNT 418
E+ EV++ ++K+ G D +T+IH K+G++ A ++++ +G G +TY
Sbjct: 384 EKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTV 443
Query: 419 LIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
LI L + EAA L +M++ G P TY+ LI G+ K G +E M +G
Sbjct: 444 LIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSG 503
Query: 479 CLPNKSTY 486
P+ Y
Sbjct: 504 TKPDNLAY 511
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 12/285 (4%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+ ++ N LL A + + ++ AV+V ++M P++ +Y ++ Y G A
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
R+ E+ KG+ PDA TY L+ F R+ +V M++ G +E+TY +I
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 320 YCKWKKPGEAVNLLEDMV-RKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI--CG 376
Y K + A+ L +DM G P + ++D L G R E ++ ++ G
Sbjct: 412 YGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSL---GKANRTVEAAALMSEMLDVG 468
Query: 377 SDNTVA--STLIHWLCKKGKVLEARNVFE-EFEGGSVASLLTYNTLIAGLCERGELCEAA 433
T+ S LI K GK EA + F G+ L Y+ ++ L E +A
Sbjct: 469 IKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAW 528
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCK---VGNAKEGIRILEEMC 475
L+ DM+ G P+ Y L+I G K + ++ IR +EE+C
Sbjct: 529 GLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELC 573
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 145/351 (41%), Gaps = 9/351 (2%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I YG G A R F+ +E + G P + + V++ + +
Sbjct: 339 ISVYGRCGLAAEAERLFMELELK-GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQ-KM 396
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGM-GLVPNVVSYTTVMGGYAWRGDMDG 258
G + ++ N ++ K ++++A+++ +M G+ G P+ ++YT ++
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A ++ E+LD G P TY+ L+ G+ + G+ A M +G +P+ + Y VM++
Sbjct: 457 AAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLD 516
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
+ + +A L DM+ GH PS L ++ L +E + + R + ++CG +
Sbjct: 517 VLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMN 576
Query: 379 N-TVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
++S L+ C L AR + G T +++ G EA L +
Sbjct: 577 PLEISSVLVKGECFD---LAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLE 633
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGI-RILEEMCENG-CLPNKSTY 486
+ E LI CKV N + + C +G C + + Y
Sbjct: 634 FLKEHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMY 684
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 145/356 (40%), Gaps = 38/356 (10%)
Query: 164 GIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEV 223
G P ++ Q + A ++F N+ R G SP V S NILL ALC +E
Sbjct: 782 GRTPDLKTWNSLMSAYAQCGCYERARAIF-NTMMRDGPSPTVESINILLHALCVDGRLEE 840
Query: 224 AVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVD 283
V++E+ MG + S ++ +A G++ ++ + G+ P Y ++++
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 284 GFCRQGRLVAA-----------------------------------IKVMDDMEENGVQP 308
C+ R+ A ++V ++E G++P
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEP 960
Query: 309 NEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW 368
+E TY +I YC+ ++P E L++ M G P ++ ++ +E+A +++
Sbjct: 961 DETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLF 1020
Query: 369 -RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCER 426
+L K D + T++ G +A + + + + +L T + L+
Sbjct: 1021 EELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSS 1080
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
G EA ++ ++ + Y+ +I+ + + + GI L EM + G P+
Sbjct: 1081 GNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 139/307 (45%), Gaps = 3/307 (0%)
Query: 181 QNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNV 240
+ K + A SV N R + G +P++ + N L+ A + E A + + M+ G P V
Sbjct: 764 KQKLWQKAESVVGNLR-QSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTV 822
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD 300
S ++ G ++ V+ E+ D G+ ++ +++D F R G + K+
Sbjct: 823 ESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSS 882
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
M+ G P Y +MIE CK K+ +A ++ +M + ++ + +
Sbjct: 883 MKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIED 942
Query: 361 VERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNT 418
++ +V++ +++ D T +TLI C+ + E + ++ G L TY +
Sbjct: 943 YKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKS 1002
Query: 419 LIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
LI+ ++ L +A +L+++++ KG + Y+ ++ G+ + ++L+ M G
Sbjct: 1003 LISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAG 1062
Query: 479 CLPNKST 485
P +T
Sbjct: 1063 IEPTLAT 1069
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 129/318 (40%), Gaps = 36/318 (11%)
Query: 188 AHSVFKNSRTR---FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYT 244
AH V + T+ F SP +++A K + A V+ + G P++ ++
Sbjct: 735 AHQVVNQAETKGFHFACSPMYTD---IIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWN 791
Query: 245 TVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN 304
++M YA G + A + ++ G +P + +L+ C GRL V++++++
Sbjct: 792 SLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDM 851
Query: 305 GVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC-------- 356
G + ++ + +M++A+ + E + M G++P+ L ++++LC
Sbjct: 852 GFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Query: 357 -------EEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGG 408
EE N + +W + K+ + T+ V++ E G
Sbjct: 912 EIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTV--------------QVYQRIKETG 957
Query: 409 SVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGI 468
TYNTLI C E L M G P TY LI+ F K ++
Sbjct: 958 LEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 469 RILEEMCENGCLPNKSTY 486
++ EE+ G ++S Y
Sbjct: 1018 QLFEELLSKGLKLDRSFY 1035
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 158/348 (45%), Gaps = 7/348 (2%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I YG +G + A+ F ++ G+RP++ + + F + R
Sbjct: 275 ISAYGRSGLHEEAISVFNSMK-EYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV P+ ++ N LL + E A + DEM + +V SY T++ G MD A
Sbjct: 334 GVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLA 393
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+L ++ K P+ +Y+ ++DGF + GR A+ + +M G+ + V+Y ++
Sbjct: 394 FEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSI 453
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
Y K + EA+++L +M G ++ ++G + +V+ +++ N
Sbjct: 454 YTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPN 513
Query: 380 TVA-STLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ STLI K G EA +F EF+ G A ++ Y+ LI LC+ G + A L D
Sbjct: 514 LLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLID 573
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+M ++G +PN TYN +I+ F + + G LP S+
Sbjct: 574 EMTKEGISPNVVTYNSIIDAFGRSATMDRSA----DYSNGGSLPFSSS 617
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 147/305 (48%), Gaps = 4/305 (1%)
Query: 185 HRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVN-EVEVAVRVLDEMLGMGLVPNVVSY 243
H A SVF NS +G+ PN+V+ N ++ A K E + + DEM G+ P+ +++
Sbjct: 284 HEEAISVF-NSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITF 342
Query: 244 TTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEE 303
+++ + G + A + E+ ++ D +Y L+D C+ G++ A +++ M
Sbjct: 343 NSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPV 402
Query: 304 NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVER 363
+ PN V+Y +I+ + K + EA+NL +M G ++ + + G E
Sbjct: 403 KRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEE 462
Query: 364 ACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIA 421
A ++ R + + D + L+ K+GK E + VF E + V +LLTY+TLI
Sbjct: 463 ALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
Query: 422 GLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLP 481
G + G EA ++ + G + Y+ LI+ CK G + +++EM + G P
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 482 NKSTY 486
N TY
Sbjct: 583 NVVTY 587
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 131/278 (47%), Gaps = 16/278 (5%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G++ + VS N LL KV E A+ +L EM +G+ +VV+Y ++GGY +G D
Sbjct: 438 LGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDE 497
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
+V E+ + P+ TY+ L+DG+ + G A+++ + + G++ + V Y +I+
Sbjct: 498 VKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALID 557
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
A CK G AV+L+++M ++G P+ ++D ++R+ + G
Sbjct: 558 ALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSN------GGS 611
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERG--ELCEAARLW 436
+S+ + L + E V + F + S N CE G EL ++
Sbjct: 612 LPFSSSALSALTET----EGNRVIQLFGQLTTES----NNRTTKDCEEGMQELSCILEVF 663
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
M + PN T++ ++N + + ++ +LEE+
Sbjct: 664 RKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 11/287 (3%)
Query: 208 CNILLKALCKVNEVEVAVRVLDEMLGMGLVPN-----VVSYTTVMGGYAWRGDMDGAMRV 262
C +++ L NE + AV + + N + + +G Y G + A R+
Sbjct: 199 CTYIIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRY---GKVTIAKRI 255
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
G+ ++ L+ + R G AI V + M+E G++PN VTY +I+A K
Sbjct: 256 FETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK 315
Query: 323 WKKPGEAV-NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNT 380
+ V ++M R G P ++ V G E A ++ + + D
Sbjct: 316 GGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVF 375
Query: 381 VASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDM 439
+TL+ +CK G++ A + + + ++++Y+T+I G + G EA L+ +M
Sbjct: 376 SYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM 435
Query: 440 VEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G A + +YN L++ + KVG ++E + IL EM G + TY
Sbjct: 436 RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTY 482
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 155/366 (42%), Gaps = 44/366 (12%)
Query: 165 IRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSC-----NILLKALCKVN 219
IRP V +++R A VF+ R + NV+ N L+ LCKV
Sbjct: 325 IRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVG 384
Query: 220 EVEVAVRVLDEM-LGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTY 278
++ A +L M L PN V+Y ++ GY G ++ A V+ + + P+ T
Sbjct: 385 RLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTV 444
Query: 279 TVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVR 338
+V G CR L A+ DME+ GV+ N VTY +I A C +A+ E M+
Sbjct: 445 NTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE 504
Query: 339 KGHVPS--------SGLC--------CKVVD-------------------VLCEEGNVER 363
G P SGLC +VV+ + C++ N E+
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEK 564
Query: 364 ACEVWRVLRKICGS-DNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIA 421
E+ + K D+ +TLI + K + E+ E G ++ TY +I
Sbjct: 565 VYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVID 624
Query: 422 GLCERGELCEAARLWDDM-VEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL 480
C GEL EA +L+ DM + PN YN+LIN F K+GN + + + EEM
Sbjct: 625 AYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVR 684
Query: 481 PNKSTY 486
PN TY
Sbjct: 685 PNVETY 690
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 152/320 (47%), Gaps = 7/320 (2%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I GY AGK ++A R++ I+P+V ++ +A VF +
Sbjct: 413 IDGYCRAGKLETAKEVVSRMKED-EIKPNVVTVNTIVGGMCRHHGLNMA-VVFFMDMEKE 470
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW-RGDMDG 258
GV NVV+ L+ A C V+ VE A+ ++ML G P+ Y ++ G R D D
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHD- 529
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+RV+ ++ + G++ D Y +L+ FC + +++ DME+ G +P+ +TY +I
Sbjct: 530 AIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLIS 589
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV--LRKICG 376
+ K K ++E M G P+ V+D C G ++ A ++++ L
Sbjct: 590 FFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVN 649
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARL 435
+ + + LI+ K G +A ++ EE + V ++ TYN L L E+ + +L
Sbjct: 650 PNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKL 709
Query: 436 WDDMVEKGRAPNAFTYNLLI 455
D+MVE+ PN T +L+
Sbjct: 710 MDEMVEQSCEPNQITMEILM 729
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 148/348 (42%), Gaps = 64/348 (18%)
Query: 190 SVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLV--PNVVSYTTVM 247
S KNS+ R N+++ L + V+ A +VLDEML V PN ++ V+
Sbjct: 180 SNMKNSQVR----------NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVL 229
Query: 248 GGYAWRGDM---DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD---- 300
W+G + + + ++ G +P++ T + C+ R AA ++ D
Sbjct: 230 HE-VWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKN 288
Query: 301 -------------------------------MEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
M+E ++P+ VT G++I CK ++ EA
Sbjct: 289 KTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEA 348
Query: 330 VNLLEDMVRKGHVPSSGLCCK--------VVDVLCEEGNVERACE--VWRVLRKICGSDN 379
+ + E M +G G K ++D LC+ G ++ A E V L + C +
Sbjct: 349 LEVFEKM--RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNA 406
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDD 438
+ LI C+ GK+ A+ V + + +++T NT++ G+C L A + D
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMD 466
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M ++G N TY LI+ C V N ++ + E+M E GC P+ Y
Sbjct: 467 MEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIY 514
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 150/372 (40%), Gaps = 82/372 (22%)
Query: 197 TRF---GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLG-------------------- 233
+RF GVSPN V + +LCK A +L +++
Sbjct: 248 SRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRN 307
Query: 234 ---------------MGLVPNVVSYTTVMGGYAWRGDMDGAMRVL----GEVLDKG--WA 272
+ + P+VV+ ++ +D A+ V G+ D G
Sbjct: 308 MDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIK 367
Query: 273 PDATTYTVLVDGFCRQGRLVAAIKVMDDME-ENGVQPNEVTYGVMIEAYCKWKKPGEAVN 331
D+ + L+DG C+ GRL A +++ M+ E PN VTY +I+ YC+ K A
Sbjct: 368 ADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKE 427
Query: 332 LLEDMVRKGHVPS--------SGLC---------------------------CKVVDVLC 356
++ M P+ G+C ++ C
Sbjct: 428 VVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 357 EEGNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLL 414
NVE+A + ++L C D + LI LC+ + +A V E+ EGG LL
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLL 547
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
YN LI C++ + + DM ++G+ P++ TYN LI+ F K + + R++E+M
Sbjct: 548 AYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 475 CENGCLPNKSTY 486
E+G P +TY
Sbjct: 608 REDGLDPTVTTY 619
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEM-LGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G+ P V + ++ A C V E++ A+++ +M L + PN V Y ++ ++ G+
Sbjct: 611 GLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQ 670
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+ + E+ K P+ TY L + + +K+MD+M E +PN++T +++E
Sbjct: 671 ALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPNQITMEILME 730
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 171/389 (43%), Gaps = 43/389 (11%)
Query: 137 VTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSR 196
T I YG AGK D AL+ F ++ G P+ + R + + +
Sbjct: 390 TTVIDAYGKAGKEDEALKLFYSMK-EAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAV-RVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
+ G SPN + N +L ALC ++ V RV EM G P+ ++ T++ Y G
Sbjct: 449 SN-GCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGS 506
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
A ++ GE+ G+ TTY L++ R+G + V+ DM+ G +P E +Y +
Sbjct: 507 EVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVV---DVLCEE-GNVERACEVWR-- 369
M++ Y K + +E+ +++G + S + + + + C ERA +++
Sbjct: 567 MLQCYAKGGNY-LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKH 625
Query: 370 ---------------------------VLRKI----CGSDNTVASTLIHWLCKKGKVLEA 398
+L I D ++L+ ++G+ +A
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKA 685
Query: 399 RNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
+ + E + L++YNT+I G C RG + EA R+ +M E+G P FTYN ++G
Sbjct: 686 EEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSG 745
Query: 458 FCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ +G E ++E M +N C PN+ T+
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTF 774
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 115/235 (48%), Gaps = 11/235 (4%)
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A ++L ++ + + D YT ++ + R G+ AI + + M+E G P VTY V+++
Sbjct: 194 AAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILD 253
Query: 319 AYCK----WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI 374
+ K W+K + +L++M KG C V+ EG + A E + L K
Sbjct: 254 VFGKMGRSWRK---ILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL-KS 309
Query: 375 CGSD--NTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCE 431
CG + + L+ K G EA +V +E E S A +TYN L+A G E
Sbjct: 310 CGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKE 369
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
AA + + M +KG PNA TY +I+ + K G E +++ M E GC+PN TY
Sbjct: 370 AAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTY 424
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 138/328 (42%), Gaps = 44/328 (13%)
Query: 200 GVSPNVVSCNILLKALCKVNEV-EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G SP +V+ N++L K+ + VLDEM GL + + +TV+ A G +
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN-------------- 304
A E+ G+ P TY L+ F + G A+ V+ +MEEN
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 305 ---------------------GVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVP 343
GV PN +TY +I+AY K K EA+ L M G VP
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 344 SSGLCCKVVDVLCEEGNVERACEVWRVLRKI----CGSDNTVASTLIHWLCKKGKVLEAR 399
++ C VL G R+ E+ ++L + C + +T++ KG
Sbjct: 420 NT---CTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVN 476
Query: 400 NVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
VF E + G T+NTLI+ G +A++++ +M G TYN L+N
Sbjct: 477 RVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
Query: 459 CKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ G+ + G ++ +M G P +++Y
Sbjct: 537 ARKGDWRSGENVISDMKSKGFKPTETSY 564
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 140/280 (50%), Gaps = 3/280 (1%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
I ++ L + ++ VA ++LD++ + +V +YTT++ Y+ G + A+ + + +
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAI-KVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
G +P TY V++D F + GR I V+D+M G++ +E T ++ A + E
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-ICGSDNTVASTLIH 387
A ++ G+ P + ++ V + G A V + + + C +D+ + L+
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 388 WLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
+ G EA V E + G + + +TY T+I + G+ EA +L+ M E G P
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
N TYN +++ K + E I++L +M NGC PN++T+
Sbjct: 420 NTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 127/282 (45%), Gaps = 6/282 (2%)
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
TR G + V + N LL AL + + V+ +M G P SY+ ++ YA G+
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY 577
Query: 257 DGAMRVLGEVLDKGWAPD-ATTYTVLVDGF-CRQGRLVAAIKVMDDMEENGVQPNEVTYG 314
G R+ + + P T+L+ F CR L + + +++G +P+ V +
Sbjct: 578 LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA--LAGSERAFTLFKKHGYKPDMVIFN 635
Query: 315 VMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI 374
M+ + + +A +LE + G P ++D+ G +A E+ + L K
Sbjct: 636 SMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 695
Query: 375 CGSDNTVA-STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEA 432
+ V+ +T+I C++G + EA + E E G + TYNT ++G G E
Sbjct: 696 QLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
Query: 433 ARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+ + M + PN T+ ++++G+C+ G E + + ++
Sbjct: 756 EDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 139/362 (38%), Gaps = 72/362 (19%)
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMG--GYAWRG 254
T+ GV PN ++ ++ A K + + A+++ M G VPN +Y V+ G R
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 255 D--------------------------------MDGAM-RVLGEVLDKGWAPDATTYTVL 281
+ MD + RV E+ G+ PD T+ L
Sbjct: 438 NEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTL 497
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
+ + R G V A K+ +M G TY ++ A + N++ DM KG
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 342 VPSSGLCCKVVDVLCEEGN---VER---------ACEVWRVLRK----------ICGS-- 377
P+ ++ + GN +ER W +LR + GS
Sbjct: 558 KPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSER 617
Query: 378 ------------DNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLC 424
D + ++++ + +A + E E G L+TYN+L+
Sbjct: 618 AFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYV 677
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
RGE +A + + + P+ +YN +I GFC+ G +E +R+L EM E G P
Sbjct: 678 RRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 485 TY 486
TY
Sbjct: 738 TY 739
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 88/173 (50%), Gaps = 1/173 (0%)
Query: 164 GIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEV 223
G +P + +N + A + ++ R G+SP++V+ N L+ + E
Sbjct: 626 GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRED-GLSPDLVTYNSLMDMYVRRGECWK 684
Query: 224 AVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVD 283
A +L + L P++VSY TV+ G+ RG M A+R+L E+ ++G P TY V
Sbjct: 685 AEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVS 744
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDM 336
G+ G V++ M +N +PNE+T+ ++++ YC+ K EA++ + +
Sbjct: 745 GYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 6/196 (3%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A ++FK + G P++V N +L + N + A +L+ + GL P++V+Y ++M
Sbjct: 618 AFTLFK----KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLM 673
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
Y RG+ A +L + PD +Y ++ GFCR+G + A++++ +M E G++
Sbjct: 674 DMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIR 733
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P TY + Y E +++E M + P+ VVD C G A +
Sbjct: 734 PCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDF 793
Query: 368 WRVLRKI--CGSDNTV 381
++ C D ++
Sbjct: 794 VSKIKTFDPCFDDQSI 809
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 153/310 (49%), Gaps = 21/310 (6%)
Query: 59 PKLLASLISRQHDPHLSLQIFRHAQTH----HRASSHHPLPYRAIFLKLSRARCFPEMES 114
P + LI+ Q DP L+ +IF +A H SSH L LKL R R F ++
Sbjct: 51 PTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLIL-----ILKLGRGRYFNLIDD 105
Query: 115 LLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXX 174
+L+ +H + GE I+ Y A P+ L TF ++ P +
Sbjct: 106 VLA---KHRSSGY-PLTGE-IFTYLIKVYAEAKLPEKVLSTFYKM-LEFNFTPQPKHLNR 159
Query: 175 XXXXXVQNKRH-RLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLG 233
V ++ + + A +FK+SR GV PN S N+L++A C +++ +A ++ +ML
Sbjct: 160 ILDVLVSHRGYLQKAFELFKSSRLH-GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLE 218
Query: 234 MGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVA 293
+VP+V SY ++ G+ +G ++GAM +L ++L+KG+ PD T L+ G C QG
Sbjct: 219 RDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRT----LIGGLCDQGMFDE 274
Query: 294 AIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVD 353
K +++M G P+ +++ +C + K EA +++E +++ G S V+
Sbjct: 275 GKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIP 334
Query: 354 VLCEEGNVER 363
++C E E+
Sbjct: 335 LICNEDESEK 344
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 81/175 (46%), Gaps = 7/175 (4%)
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCE-EGNVERACEVWRVL 371
+ +I+ Y + K P + ++ M+ P +++DVL G +++A E+++
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 372 RKICGSDNTVA-STLIHWLCKKGKVLEARNVF-EEFEGGSVASLLTYNTLIAGLCERGEL 429
R NT + + L+ C + A +F + E V + +Y LI G C +G++
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
A L DDM+ KG P+ LI G C G EG + LEEM G P+ S
Sbjct: 242 NGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFS 292
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 95/238 (39%), Gaps = 40/238 (16%)
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFC-RQGRLVAAIKVMDDM 301
+T ++ YA + + ++L+ + P ++D +G L A ++
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
+GV PN +Y ++++A+C A L M+ + VP
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVP------------------ 223
Query: 362 ERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLI 420
D LI C+KG+V A + ++ G V TLI
Sbjct: 224 ----------------DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLI 263
Query: 421 AGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
GLC++G E + ++M+ KG +P+ N L+ GFC G +E ++E + +NG
Sbjct: 264 GGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 321
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 145/296 (48%), Gaps = 12/296 (4%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R P+ SC+ L++ L ++++++ A+ +L M+ G VP+ ++Y ++G +G +
Sbjct: 132 RHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIR 191
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ +L ++ G PD TY ++ G AI+ D +NG P +TY V++
Sbjct: 192 TALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLV 251
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
E C++ A+ +LEDM +G P +V+ C GN+E EV V++ I
Sbjct: 252 ELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLE---EVASVIQHILSH 308
Query: 378 D---NTVA-STLIHWLCKK---GKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELC 430
NTV +TL+H LC +V E N+ ++ +++TYN LI GLC+ L
Sbjct: 309 GLELNTVTYNTLLHSLCSHEYWDEVEEILNIM--YQTSYCPTVITYNILINGLCKARLLS 366
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A + M+E+ P+ TYN ++ K G + I +L + C P TY
Sbjct: 367 RAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITY 422
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 135/280 (48%), Gaps = 2/280 (0%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
N +L LC ++ A ++++ M VP+ S + ++ G A +D AM +L ++
Sbjct: 108 NEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVM 167
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
G PD TY +++ C++G + A+ +++DM +G P+ +TY +I + +
Sbjct: 168 SGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQ 227
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICGSDNTVASTLIH 387
A+ +D ++ G P +V+++C RA EV + + C D ++L++
Sbjct: 228 AIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN 287
Query: 388 WLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
+ C++G + E +V + G + +TYNTL+ LC E + + M + P
Sbjct: 288 YNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCP 347
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
TYN+LING CK I +M E CLP+ TY
Sbjct: 348 TVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTY 387
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 140/297 (47%), Gaps = 2/297 (0%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F + + G P +++ +L++ +C+ A+ VL++M G P++V+Y +++
Sbjct: 231 FWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNC 290
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
RG+++ V+ +L G + TY L+ C ++++ M + P +
Sbjct: 291 RRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVI 350
Query: 312 TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
TY ++I CK + A++ M+ + +P V+ + +EG V+ A E+ +L
Sbjct: 351 TYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLL 410
Query: 372 RKICGSDNTVA-STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGEL 429
+ C + +++I L KKG + +A ++ + + G +T +LI G C +
Sbjct: 411 KNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLV 470
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
EA ++ + +G TY L+I G CK + I ++E M GC P+++ Y
Sbjct: 471 EEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIY 527
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 164/367 (44%), Gaps = 40/367 (10%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P+ ++ N+++ LCK + A+ +L++M G P+V++Y TV+ G+ + A
Sbjct: 169 GGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQA 228
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQP----------- 308
+R + L G P TYTVLV+ CR AI+V++DM G P
Sbjct: 229 IRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNY 288
Query: 309 ------------------------NEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS 344
N VTY ++ + C + E +L M + + P+
Sbjct: 289 NCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPT 348
Query: 345 SGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFE 403
+++ LC+ + RA + +++L + C D +T++ + K+G V +A +
Sbjct: 349 VITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLG 408
Query: 404 EFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
+ L+TYN++I GL ++G + +A L+ M++ G P+ T LI GFC+
Sbjct: 409 LLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRAN 468
Query: 463 NAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXMNQEINKVVALAMSTGV--DGELW 520
+E ++L+E G STY + I +VV + ++ G D ++
Sbjct: 469 LVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI-EVVEIMLTGGCKPDETIY 527
Query: 521 DLLVKHV 527
+VK V
Sbjct: 528 TAIVKGV 534
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 123/271 (45%), Gaps = 2/271 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P++V+ N L+ C+ +E V+ +L GL N V+Y T++ D
Sbjct: 274 GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEV 333
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+L + + P TY +L++G C+ L AI M E P+ VTY ++ A
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSD 378
K +A+ LL + P V+D L ++G +++A E++ ++L D
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPD 453
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ +LI+ C+ V EA V +E G+ TY +I GLC++ E+ A + +
Sbjct: 454 DITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVE 513
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGI 468
M+ G P+ Y ++ G ++G E +
Sbjct: 514 IMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 87/214 (40%), Gaps = 35/214 (16%)
Query: 274 DATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLL 333
D T ++ C G+L A K+++ M + P+ + ++ + + +A+ +L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 334 EDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKG 393
MV G VP + ++ LC KKG
Sbjct: 163 RVMVMSGGVPDTITYNMIIGNLC----------------------------------KKG 188
Query: 394 KVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYN 452
+ A + E+ GS ++TYNT+I + + G +A R W D ++ G P TY
Sbjct: 189 HIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYT 248
Query: 453 LLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+L+ C+ + I +LE+M GC P+ TY
Sbjct: 249 VLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTY 282
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 36/149 (24%)
Query: 374 ICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE--------------------------- 406
I +D + ++H LC GK+ +A + E
Sbjct: 99 ITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKA 158
Query: 407 ---------GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
G V +TYN +I LC++G + A L +DM G P+ TYN +I
Sbjct: 159 MCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRC 218
Query: 458 FCKVGNAKEGIRILEEMCENGCLPNKSTY 486
GNA++ IR ++ +NGC P TY
Sbjct: 219 MFDYGNAEQAIRFWKDQLQNGCPPFMITY 247
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 17/251 (6%)
Query: 239 NVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVM 298
+V+ YT ++ G G + A+ + +G + TY L++G C+QG LV A+++
Sbjct: 654 DVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLF 713
Query: 299 DDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEE 358
D +E G+ P+EVTYG++I+ CK +A LL+ MV KG VP+ + +VD C+
Sbjct: 714 DSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKL 773
Query: 359 GNVERACEVWRVLRKICGS---DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLL 414
G E A V V RK+ G D S++I CKKG + EA +VF EF+ ++ A
Sbjct: 774 GQTEDAMRV--VSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFF 831
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEK-------GRAPNAFTYNLLINGF----CKVGN 463
+ LI G C +G + EA L +M+ R + I GF C+ G
Sbjct: 832 GFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGR 891
Query: 464 AKEGIRILEEM 474
+ I+IL+E+
Sbjct: 892 VPQAIKILDEI 902
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 135/281 (48%), Gaps = 8/281 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++ +VVS +IL+ L K VE A+ +L +M+ G+ PN+++YT ++ G G ++ A
Sbjct: 272 GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEA 331
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ +L G D Y L+DG CR+G L A ++ DME+ G+QP+ +TY +I
Sbjct: 332 FVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV-WRVLRKICGSD 378
C + EA D V KG V ++D + N++ E+ R L D
Sbjct: 392 LCMAGRVSEA-----DEVSKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMD 446
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ + L+ G EA ++ E TY T+I G C+ G++ EA +++
Sbjct: 447 LVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFN 506
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
++ K A YN +I+ CK G +L E+ E G
Sbjct: 507 EL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKG 546
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 155/331 (46%), Gaps = 42/331 (12%)
Query: 196 RTRF---GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
R RF + ++V CNILLKA + A + M M L P+ +Y T++ GY
Sbjct: 435 RRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCK 494
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
G ++ A+ + E L K A Y ++D C++G L A +V+ ++ E G+ + T
Sbjct: 495 TGQIEEALEMFNE-LRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHT 553
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR 372
++ + + L+ + + G+ + +LC+ G+ E A EV+ ++R
Sbjct: 554 SRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMR 613
Query: 373 K----------------------------ICGSDNTVAS-------TLIHWLCKKGKVLE 397
+ + + T++S +I+ LCK+G +++
Sbjct: 614 RKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVK 673
Query: 398 ARNV--FEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLI 455
A N+ F + G ++ ++ TYN+LI GLC++G L EA RL+D + G P+ TY +LI
Sbjct: 674 ALNLCSFAKSRGVTLNTI-TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILI 732
Query: 456 NGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ CK G + ++L+ M G +PN Y
Sbjct: 733 DNLCKEGLFLDAEKLLDSMVSKGLVPNIIIY 763
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 151/328 (46%), Gaps = 48/328 (14%)
Query: 187 LAHSVFKNSRTRFGVSPNVVSCNILLKALC---KVNEVEVAVRVLDEMLGMGLVPNVVSY 243
LA F+++ + PN+V+ L+ ALC KV+EV VR L++ G + V Y
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDE---GFEFDCVFY 245
Query: 244 TTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEE 303
+ + GY G + A+ E+++KG D +Y++L+DG ++G + A+ ++ M +
Sbjct: 246 SNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIK 305
Query: 304 NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVER 363
GV+PN +TY +I CK K EA L ++ G L ++D +C +GN+ R
Sbjct: 306 EGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNR 365
Query: 364 ACEVWRVL--RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIA 421
A + + R I S T +T+I+ LC G+V EA +E G V ++TY+TL+
Sbjct: 366 AFSMLGDMEQRGIQPSILTY-NTVINGLCMAGRVSEA----DEVSKGVVGDVITYSTLLD 420
Query: 422 G---------------------------LCE--------RGELCEAARLWDDMVEKGRAP 446
+C G EA L+ M E P
Sbjct: 421 SYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTP 480
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEM 474
+ TY +I G+CK G +E + + E+
Sbjct: 481 DTATYATMIKGYCKTGQIEEALEMFNEL 508
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 129/275 (46%), Gaps = 15/275 (5%)
Query: 180 VQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPN 239
V N R A+ + N+ S +V+ I++ LCK + A+ + G+ N
Sbjct: 630 VDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLN 689
Query: 240 VVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMD 299
++Y +++ G +G + A+R+ + + G P TY +L+D C++G + A K++D
Sbjct: 690 TITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLD 749
Query: 300 DMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEG 359
M G+ PN + Y +++ YCK + +A+ ++ + P + ++ C++G
Sbjct: 750 SMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKG 809
Query: 360 NVERACEVWRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYN 417
++E A V+ + K +D LI C KG++ EAR + E SV L+ N
Sbjct: 810 DMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLI--N 867
Query: 418 TLIAGLCE----RGELCEAARLWDDMVEKGRAPNA 448
+ A L E RG L E + E+GR P A
Sbjct: 868 RVDAELAESESIRGFLVE-------LCEQGRVPQA 895
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 141/316 (44%), Gaps = 55/316 (17%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
++P+ + ++K CK ++E A+ + +E L V V Y ++ +G +D A
Sbjct: 478 LTPDTATYATMIKGYCKTGQIEEALEMFNE-LRKSSVSAAVCYNRIIDALCKKGMLDTAT 536
Query: 261 RVLGEVLDKGWAPDATTYTVLVDG-----------------------------------F 285
VL E+ +KG D T L+
Sbjct: 537 EVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLL 596
Query: 286 CRQGRLVAAIKVMDDMEENGVQ---PNEVTYGVM-----IEAYCKWKKPGEAVNLLEDMV 337
C++G AAI+V M G+ P+ + ++ ++AY GE D++
Sbjct: 597 CKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVI 656
Query: 338 RKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVL 396
+++ LC+EG + +A + + + NT+ ++LI+ LC++G ++
Sbjct: 657 DY---------TIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLV 707
Query: 397 EARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLI 455
EA +F+ E G V S +TY LI LC+ G +A +L D MV KG PN YN ++
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 456 NGFCKVGNAKEGIRIL 471
+G+CK+G ++ +R++
Sbjct: 768 DGYCKLGQTEDAMRVV 783
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 120/273 (43%), Gaps = 40/273 (14%)
Query: 235 GLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG--WAPDATTYTVLVDGFCRQGRLV 292
G P+ +++ +++ + +G+MD A+ VL + +K + D + ++ GFC+ G+
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 293 AAIKVMDDMEENGVQ-PNEVTYGVMIEAYCKWKKPGEAVNL---LED------------- 335
A+ + ++GV PN VTY ++ A C+ K E +L LED
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 336 -------------------MVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG 376
MV KG ++D L +EGNVE A + + K
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 377 SDNTVAST-LIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAAR 434
N + T +I LCK GK+ EA +F G Y TLI G+C +G L A
Sbjct: 309 EPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFS 368
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEG 467
+ DM ++G P+ TYN +ING C G E
Sbjct: 369 MLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA 401
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 41/202 (20%)
Query: 326 PGEAVNLLEDMVRK-GHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS---DNTV 381
P + + +L D +R G PSS C ++ E+G ++ A EV ++ + DN V
Sbjct: 114 PSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFV 173
Query: 382 ASTLIHWLCKKGKVLEARNVFEEF--EGGSVASLLTYNTLIAGLCERGELCE----AARL 435
S +I CK GK A FE G V +L+TY TL++ LC+ G++ E RL
Sbjct: 174 CSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRL 233
Query: 436 WD-------------------------------DMVEKGRAPNAFTYNLLINGFCKVGNA 464
D +MVEKG + +Y++LI+G K GN
Sbjct: 234 EDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNV 293
Query: 465 KEGIRILEEMCENGCLPNKSTY 486
+E + +L +M + G PN TY
Sbjct: 294 EEALGLLGKMIKEGVEPNLITY 315
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 179/413 (43%), Gaps = 52/413 (12%)
Query: 76 LQIFRHAQ----------THHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQ 125
L+ FRHA+ + +H Y ++ L++ R F E+++S L +
Sbjct: 167 LERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQF---ETMVSVLEEMGTK 223
Query: 126 QFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRH 185
L + A++ + A + A+ F + + + V + K
Sbjct: 224 GLLTM---ETFTIAMKAFAAAKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLG 279
Query: 186 RLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTT 245
+ A +F + RF +PN+++ +LL C+V + A R+ ++M+ GL P++V++
Sbjct: 280 KEAQVLFDKLKERF--TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNV 337
Query: 246 VMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
++ G A+++ + KG P+ +YT+++ FC+Q + AI+ DDM ++G
Sbjct: 338 MLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 397
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERAC 365
+QP+ Y +I + KK LL++M KGH P ++ ++ + E
Sbjct: 398 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 457
Query: 366 EVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCE 425
++ + + N + + IH ++++ V +E G
Sbjct: 458 RIYNKMIQ-----NEIEPS-IHTF---NMIMKSYFVARNYEMGRA--------------- 493
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
+WD+M++KG P+ +Y +LI G G ++E R LEEM + G
Sbjct: 494 ---------VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 537
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 162/410 (39%), Gaps = 52/410 (12%)
Query: 134 DPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFK 193
D +V + + A KP A R F R G R + ++ SV +
Sbjct: 161 DLIVEVLERFRHARKP--AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLE 218
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
T+ ++ + I +KA E + AV + + M V + ++ R
Sbjct: 219 EMGTKGLLTMETFT--IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG-R 275
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
+ +VL + L + + P+ TYTVL++G+CR L+ A ++ +DM ++G++P+ V +
Sbjct: 276 AKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAH 335
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
VM+E + K +A+ L M KG P+ ++ C++ ++E A E +
Sbjct: 336 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYF----- 390
Query: 374 ICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAA 433
D+ V S G Y LI G + +L
Sbjct: 391 ----DDMVDS------------------------GLQPDAAVYTCLITGFGTQKKLDTVY 422
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXX 493
L +M EKG P+ TYN LI + G RI +M +N P+ T+
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM----- 477
Query: 494 XXXXXMNQEINKVVALAMSTGVDGELWDLLVKHVVGNLDINATELDRILI 543
I K +A + + +WD ++K + D + T L R LI
Sbjct: 478 ---------IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 518
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 180/415 (43%), Gaps = 56/415 (13%)
Query: 76 LQIFRHAQ----------THHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQ 125
L+ FRHA+ + +H Y ++ L++ R F E+++S L +
Sbjct: 168 LERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQF---ETMVSVLEEMGTK 224
Query: 126 QFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRH 185
L + A++ + A + A+ F + + + V + K
Sbjct: 225 GLLTM---ETFTIAMKAFAAAKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLG 280
Query: 186 RLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTT 245
+ A +F + RF +PN+++ +LL C+V + A R+ ++M+ GL P++V++
Sbjct: 281 KEAQVLFDKLKERF--TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNV 338
Query: 246 VMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
++ G A+++ + KG P+ +YT+++ FC+Q + AI+ DDM ++G
Sbjct: 339 MLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERAC 365
+QP+ Y +I + KK LL++M KGH P ++ ++ + E A
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHAT 458
Query: 366 EVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAG--L 423
++ + + E E S+ T+N ++ +
Sbjct: 459 RIYNKM-----------------------------IQNEIE----PSIHTFNMIMKSYFM 485
Query: 424 CERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
E+ A +W++M++KG P+ +Y +LI G G ++E R LEEM + G
Sbjct: 486 ARNYEMGRA--VWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKG 538
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 158/355 (44%), Gaps = 7/355 (1%)
Query: 134 DPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFK 193
D +V + + A KP A R F R G R + ++ SV +
Sbjct: 162 DLIVEVLERFRHARKP--AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLE 219
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
T+ ++ + I +KA E + AV + + M V + ++ R
Sbjct: 220 EMGTKGLLTMETFT--IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG-R 276
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
+ +VL + L + + P+ TYTVL++G+CR L+ A ++ +DM + G++P+ V +
Sbjct: 277 AKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAH 336
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLR 372
VM+E + +K +A+ L M KG P+ ++ C++ ++E A E + ++
Sbjct: 337 NVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVD 396
Query: 373 KICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCE 431
D V + LI + K+ + +E E G TYN LI + +
Sbjct: 397 SGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEH 456
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A R+++ M++ P+ T+N+++ + N + G + EEM + G P+ ++Y
Sbjct: 457 ATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSY 511
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 91/413 (22%), Positives = 179/413 (43%), Gaps = 52/413 (12%)
Query: 76 LQIFRHAQ----------THHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQ 125
L+ FRHA+ + +H Y ++ L++ R F E+++S L +
Sbjct: 168 LERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQF---ETMVSVLEEMGTK 224
Query: 126 QFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRH 185
L + A++ + A + A+ F + + + V + K
Sbjct: 225 GLLTM---ETFTIAMKAFAAAKERKKAVGIF-ELMKKYKFKIGVETINCLLDSLGRAKLG 280
Query: 186 RLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTT 245
+ A +F + RF +PN+++ +LL C+V + A R+ ++M+ GL P++V++
Sbjct: 281 KEAQVLFDKLKERF--TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNV 338
Query: 246 VMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
++ G A+++ + KG P+ +YT+++ FC+Q + AI+ DDM ++G
Sbjct: 339 MLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERAC 365
+QP+ Y +I + KK LL++M KGH P ++ ++ + E
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGT 458
Query: 366 EVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCE 425
++ + + N + + IH ++++ V +E G
Sbjct: 459 RIYNKMIQ-----NEIEPS-IHTF---NMIMKSYFVARNYEMGRA--------------- 494
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
+WD+M++KG P+ +Y +LI G G ++E R LEEM + G
Sbjct: 495 ---------VWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKG 538
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/410 (23%), Positives = 163/410 (39%), Gaps = 52/410 (12%)
Query: 134 DPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFK 193
D +V + + A KP A R F R G + R + ++ SV +
Sbjct: 162 DLIVEVLERFRHARKP--AFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLE 219
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
T+ ++ + I +KA E + AV + + M V + ++ R
Sbjct: 220 EMGTKGLLTMETFT--IAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLG-R 276
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
+ +VL + L + + P+ TYTVL++G+CR L+ A ++ +DM ++G++P+ V +
Sbjct: 277 AKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAH 336
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
VM+E + K +A+ L M KG P+ ++ C++ ++E A E +
Sbjct: 337 NVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYF----- 391
Query: 374 ICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAA 433
D+ V S G Y LI G + +L
Sbjct: 392 ----DDMVDS------------------------GLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXX 493
L +M EKG P+ TYN LI + G RI +M +N P+ T+
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM----- 478
Query: 494 XXXXXMNQEINKVVALAMSTGVDGELWDLLVKHVVGNLDINATELDRILI 543
I K +A + + +WD ++K + D + T L R LI
Sbjct: 479 ---------IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLI 519
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 132/259 (50%), Gaps = 2/259 (0%)
Query: 230 EMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQG 289
+M+ +G+ P++V+ ++++ G+ + A+ V G++ G D T+L+D C+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 290 RLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCC 349
+V A++V+ M++ G+ PN VTY +I CK + +A L +M K P+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 350 KVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFE-EFEG 407
++D + G + + V++++ ++ N S+LI+ LC +V EA + +
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 408 GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEG 467
G +++TY+TL G + + + +L DDM ++G A N + N LI G+ + G
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 468 IRILEEMCENGCLPNKSTY 486
+ + M NG +PN +Y
Sbjct: 243 LGVFGYMTSNGLIPNIRSY 261
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 160/358 (44%), Gaps = 40/358 (11%)
Query: 133 EDPLVTA---IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAH 189
E +VTA + G+ L+ A+ ++E ++GI+ V +N+ A
Sbjct: 10 EPDIVTASSLVNGFCLSNSIKDAVYVAGQME-KMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 190 SVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGG 249
V K + R G+SPNVV+ + L+ LCK + A R L EM + PNV++++ ++
Sbjct: 69 EVLKRMKDR-GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDA 127
Query: 250 YAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
YA RG + V ++ P+ TY+ L+ G C R+ AIK++D M G PN
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
VTY + + K + + + LL+DM ++G V ++ + C
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRG-VAANTVSC-------------------- 226
Query: 370 VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGE 428
+TLI + GK+ A VF G + ++ +YN ++AGL GE
Sbjct: 227 -------------NTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGE 273
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ +A ++ M + + TY ++I+G CK KE + ++ P+ Y
Sbjct: 274 VEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAY 331
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 140/279 (50%), Gaps = 2/279 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ G+ P++V+ + L+ C N ++ AV V +M MG+ +VV T ++ +
Sbjct: 6 KLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVV 65
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ VL + D+G +P+ TY+ L+ G C+ GRL A + + +M+ + PN +T+ +I
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICG 376
+AY K K + ++ + M++ P+ ++ LC V+ A ++ ++ K C
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCT 185
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARL 435
+ STL + K +V + + ++ + G A+ ++ NTLI G + G++ A +
Sbjct: 186 PNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGV 245
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+ M G PN +YN+++ G G ++ + E M
Sbjct: 246 FGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHM 284
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 134/278 (48%), Gaps = 2/278 (0%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
++ A C+ +E A ++ EM G+ + Y T+M GY D + V + + G
Sbjct: 420 IIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECG 479
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
+ P TY L++ + + G++ A++V M+E GV+ N TY +MI + K K A
Sbjct: 480 FTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAF 539
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT-VASTLIHWL 389
+ EDMV++G P L ++ C GN++RA + + ++K+ T +IH
Sbjct: 540 AVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGY 599
Query: 390 CKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
K G + + VF+ G V ++ T+N LI GL E+ ++ +A + D+M G + N
Sbjct: 600 AKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANE 659
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
TY ++ G+ VG+ + + G + TY
Sbjct: 660 HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTY 697
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 167/365 (45%), Gaps = 8/365 (2%)
Query: 128 LDHCGEDPLVTA----IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNK 183
L CG P V I Y GK AL R+ G++ +++ V+ K
Sbjct: 475 LKECGFTPTVVTYGCLINLYTKVGKISKALEV-SRVMKEEGVKHNLKTYSMMINGFVKLK 533
Query: 184 RHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSY 243
A +VF++ + G+ P+V+ N ++ A C + ++ A++ + EM + P ++
Sbjct: 534 DWANAFAVFED-MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Query: 244 TTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEE 303
++ GYA GDM ++ V + G P T+ L++G + ++ A++++D+M
Sbjct: 593 MPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL 652
Query: 304 NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVER 363
GV NE TY +++ Y G+A + +G ++ C+ G ++
Sbjct: 653 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 364 ACEVWRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIA 421
A V + + + ++ V + LI ++G V EA ++ ++ + V + TY + I+
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 422 GLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLP 481
+ G++ A + ++M G PN TY LI G+ + ++ + EEM G P
Sbjct: 773 ACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP 832
Query: 482 NKSTY 486
+K+ Y
Sbjct: 833 DKAVY 837
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 147/322 (45%), Gaps = 7/322 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G +P VV+ L+ KV ++ A+ V M G+ N+ +Y+ ++ G+ D A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
V +++ +G PD Y ++ FC G + AI+ + +M++ +P T+ +I
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKICGS 377
Y K ++ + + M R G VP+ +++ L E+ +E+A E+ L + +
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSAN 658
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLW 436
++T + ++ G +A F + G + TY L+ C+ G + A +
Sbjct: 659 EHTY-TKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVT 717
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXX 496
+M + N+F YN+LI+G+ + G+ E ++++M + G P+ TY
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 497 XXMN---QEINKVVALAMSTGV 515
MN Q I ++ AL + +
Sbjct: 778 GDMNRATQTIEEMEALGVKPNI 799
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/299 (26%), Positives = 141/299 (47%), Gaps = 13/299 (4%)
Query: 191 VFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY 250
+ K SRT FG +++K + ++ A + M G+ P YT+++ Y
Sbjct: 304 ISKPSRTEFG---------LMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAY 354
Query: 251 AWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
A DMD A+ + ++ ++G TY+V+V GF + G AA D+ + N
Sbjct: 355 AVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNA 414
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV 370
YG +I A+C+ A L+ +M +G + ++D + ++ V++
Sbjct: 415 SIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKR 474
Query: 371 LRKICGSDNTVAST--LIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERG 427
L++ CG TV + LI+ K GK+ +A V E G +L TY+ +I G +
Sbjct: 475 LKE-CGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLK 533
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ A +++DMV++G P+ YN +I+ FC +GN I+ ++EM + P T+
Sbjct: 534 DWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 592
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 4/288 (1%)
Query: 147 GKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVV 206
G D A++T ++ +L RP+ R ++ R + VF R R G P V
Sbjct: 568 GNMDRAIQTVKEMQ-KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMR-RCGCVPTVH 625
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+ N L+ L + ++E AV +LDEM G+ N +YT +M GYA GD A +
Sbjct: 626 TFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRL 685
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
++G D TY L+ C+ GR+ +A+ V +M + N Y ++I+ + +
Sbjct: 686 QNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDV 745
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN-TVASTL 385
EA +L++ M ++G P + + G++ RA + + + N +TL
Sbjct: 746 WEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 805
Query: 386 IHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEA 432
I + +A + +EE + G Y+ L+ L R + EA
Sbjct: 806 IKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEA 853
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 144/290 (49%), Gaps = 2/290 (0%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
F + PN+ + L +C ++ A + E+ +GL+P+ V YTT++ GY G D
Sbjct: 367 FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A + G +L G P TT T+L+ R G + A V +M+ G++ + VTY ++
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
Y K + + L+++M G P ++ + G ++ A E+ L +
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 379 NTVAST-LIHWLCKKGKVLEARNV-FEEFEGGSVASLLTYNTLIAGLCERGELCEAARLW 436
+T+A T +I K+G EA + F + ++T + L+ G C+ + +A L+
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ +++ G P+ YN LI+G+C VG+ ++ ++ M + G LPN+ST+
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 137/291 (47%), Gaps = 5/291 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+FG+ P+ C LLK + +V+ +E+A ++ ML G N + + Y G D
Sbjct: 229 QFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFD 288
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
+L + G PD +TV +D C+ G L A V+ ++ G+ + V+ +I
Sbjct: 289 KGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVI 348
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CG 376
+ +CK KP EA+ L+ + P+ + + +C G++ RA +++ + ++
Sbjct: 349 DGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLL 405
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCER-GELCEAARL 435
D +T+I C G+ +A F LT +T++ G C R G + +A +
Sbjct: 406 PDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV 465
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ +M +G + TYN L++G+ K + +++EM G P+ +TY
Sbjct: 466 FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATY 516
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 2/230 (0%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I GY G+ D A + F + + G PS+ + A SVF+N +T
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGAL-LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
G+ +VV+ N L+ K +++ ++DEM G+ P+V +Y ++ RG +D
Sbjct: 472 E-GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ E++ +G+ P +T ++ GF ++G A + M + ++P+ VT ++
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
YCK ++ +A+ L ++ G P L ++ C G++E+ACE+
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 39/186 (20%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD---- 255
G+SP+V + NIL+ ++ ++ A ++ E++ G VP+ +++T V+GG++ RGD
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 256 -------------------------------MDGAMRVLGEVLDKGWAPDATTYTVLVDG 284
M+ A+ + ++LD G PD Y L+ G
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 285 FCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI---EAYCKWKKPGEAVNLLED-MVRKG 340
+C G + A +++ M + G+ PNE T+ ++ E A LLE+ +V K
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKW 687
Query: 341 HVPSSG 346
H+ S G
Sbjct: 688 HLTSGG 693
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 3/228 (1%)
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+++ +V G P L+ R L A + ++ M G N + I
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGS 377
YC + LL M G P +D LC+ G ++ A V L+
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
D+ S++I CK GK EA + F ++ Y++ ++ +C G++ A+ ++
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIKLIHSFR--LRPNIFVYSSFLSNICSTGDMLRASTIFQ 397
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
++ E G P+ Y +I+G+C +G + + + ++G P+ +T
Sbjct: 398 EIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTT 445
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 144/290 (49%), Gaps = 2/290 (0%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
F + PN+ + L +C ++ A + E+ +GL+P+ V YTT++ GY G D
Sbjct: 367 FRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDK 426
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A + G +L G P TT T+L+ R G + A V +M+ G++ + VTY ++
Sbjct: 427 AFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMH 486
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
Y K + + L+++M G P ++ + G ++ A E+ L +
Sbjct: 487 GYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVP 546
Query: 379 NTVAST-LIHWLCKKGKVLEARNV-FEEFEGGSVASLLTYNTLIAGLCERGELCEAARLW 436
+T+A T +I K+G EA + F + ++T + L+ G C+ + +A L+
Sbjct: 547 STLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLF 606
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ +++ G P+ YN LI+G+C VG+ ++ ++ M + G LPN+ST+
Sbjct: 607 NKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTH 656
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 137/291 (47%), Gaps = 5/291 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+FG+ P+ C LLK + +V+ +E+A ++ ML G N + + Y G D
Sbjct: 229 QFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFD 288
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
+L + G PD +TV +D C+ G L A V+ ++ G+ + V+ +I
Sbjct: 289 KGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVI 348
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CG 376
+ +CK KP EA+ L+ + P+ + + +C G++ RA +++ + ++
Sbjct: 349 DGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLL 405
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCER-GELCEAARL 435
D +T+I C G+ +A F LT +T++ G C R G + +A +
Sbjct: 406 PDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV 465
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ +M +G + TYN L++G+ K + +++EM G P+ +TY
Sbjct: 466 FRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATY 516
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 113/230 (49%), Gaps = 2/230 (0%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I GY G+ D A + F + + G PS+ + A SVF+N +T
Sbjct: 413 TMIDGYCNLGRTDKAFQYFGAL-LKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKT 471
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
G+ +VV+ N L+ K +++ ++DEM G+ P+V +Y ++ RG +D
Sbjct: 472 E-GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ E++ +G+ P +T ++ GF ++G A + M + ++P+ VT ++
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
YCK ++ +A+ L ++ G P L ++ C G++E+ACE+
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACEL 640
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 86/186 (46%), Gaps = 39/186 (20%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD---- 255
G+SP+V + NIL+ ++ ++ A ++ E++ G VP+ +++T V+GG++ RGD
Sbjct: 508 GISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEA 567
Query: 256 -------------------------------MDGAMRVLGEVLDKGWAPDATTYTVLVDG 284
M+ A+ + ++LD G PD Y L+ G
Sbjct: 568 FILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHG 627
Query: 285 FCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI---EAYCKWKKPGEAVNLLED-MVRKG 340
+C G + A +++ M + G+ PNE T+ ++ E A LLE+ +V K
Sbjct: 628 YCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVAKW 687
Query: 341 HVPSSG 346
H+ S G
Sbjct: 688 HLTSGG 693
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 3/228 (1%)
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+++ +V G P L+ R L A + ++ M G N + I
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIR 279
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGS 377
YC + LL M G P +D LC+ G ++ A V L+
Sbjct: 280 KYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ 339
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
D+ S++I CK GK EA + F ++ Y++ ++ +C G++ A+ ++
Sbjct: 340 DSVSVSSVIDGFCKVGKPEEAIKLIHSFR--LRPNIFVYSSFLSNICSTGDMLRASTIFQ 397
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
++ E G P+ Y +I+G+C +G + + + ++G P+ +T
Sbjct: 398 EIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTT 445
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/359 (26%), Positives = 158/359 (44%), Gaps = 18/359 (5%)
Query: 128 LDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRL 187
L+H + + ++G+ AG D A F+R+E L P +
Sbjct: 527 LEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPL---PKSVYFTLFTSLCAEKDYISK 583
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A + + + GV P L+ A C+VN V A + ++ +VP++ +YT ++
Sbjct: 584 AQDLL-DRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMI 642
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
Y + A + ++ + PD TY+VL++ + + +ME V
Sbjct: 643 NTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVI 695
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P+ V Y +MI YC + L +DM R+ VP + V+ E N+ R +
Sbjct: 696 PDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDV-VTYTVLLKNKPERNLSREMKA 754
Query: 368 WRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCER 426
+ V D + LI W CK G + EA+ +F++ E G Y LIA C+
Sbjct: 755 FDV-----KPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKM 809
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
G L EA ++D M+E G P+ Y LI G C+ G + +++++EM E G P K++
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKAS 868
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 141/301 (46%), Gaps = 9/301 (2%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A+ +FK R +S + V N+ AL K+ +VE A+ + EM G G+ P+V++YTT++
Sbjct: 380 AYDLFKEFRET-NISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLI 438
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
GG +G A ++ E+ G PD Y VL G G A + + ME GV+
Sbjct: 439 GGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVK 498
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P VT+ ++IE + +A E + K + + V C G ++ A E
Sbjct: 499 PTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASM----VKGFCAAGCLDHAFE- 553
Query: 368 WRVLRKICGSDNTVASTLIHWLC-KKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCE 425
R +R +V TL LC +K + +A+++ + ++ G Y LI C
Sbjct: 554 -RFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCR 612
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+ +A ++ +V K P+ FTY ++IN +C++ K+ + E+M P+ T
Sbjct: 613 VNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVT 672
Query: 486 Y 486
Y
Sbjct: 673 Y 673
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 185/452 (40%), Gaps = 33/452 (7%)
Query: 61 LLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARC----FPEMESLL 116
+L L S + DP+L+L + R + LP + + R C ++++ L
Sbjct: 60 VLRVLNSMKDDPYLALSFLK------RIEGNVTLPSVQAYATVIRIVCGWGLDKKLDTFL 113
Query: 117 STLPRH-------SPQQFLDHCGE--DPLVTAIR-------GYGLAGKPDSALRTFLRIE 160
L R S L GE LV IR Y D A+ F R
Sbjct: 114 FELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAY 173
Query: 161 SRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNE 220
LG P ++ + + R + F R G+ + + ++++AL + ++
Sbjct: 174 YSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIE-RLGLDADAHTYVLVVQALWRNDD 232
Query: 221 VEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDAT---- 276
E ++L +L V Y + G D A +L + D D +
Sbjct: 233 KEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGI 292
Query: 277 TYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDM 336
Y +V G C + R+ A V+ DME++G+ P+ Y +IE + K +AV++ M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 337 VRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-DNTVASTLIHWLCKKGKV 395
++K + + ++ C+ GN A ++++ R+ S D + L K GKV
Sbjct: 353 LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKV 412
Query: 396 LEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLL 454
EA +F E G +A ++ Y TLI G C +G+ +A L +M G+ P+ YN+L
Sbjct: 413 EEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVL 472
Query: 455 INGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G G A+E L+ M G P T+
Sbjct: 473 AGGLATNGLAQEAFETLKMMENRGVKPTYVTH 504
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 141/304 (46%), Gaps = 21/304 (6%)
Query: 187 LAHSVFKNSRTRFGVSPNVVSCNILLKALC-KVNEVEVAVRVLDEMLGMGLVPNVVSYTT 245
L H+ + R F + +V L +LC + + + A +LD M +G+ P Y
Sbjct: 548 LDHAFERFIRLEFPLPKSVYFT--LFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGK 605
Query: 246 VMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
++G + ++ A ++ K PD TYT++++ +CR A + +DM+
Sbjct: 606 LIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRD 665
Query: 306 VQPNEVTYGVMIEA--YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVER 363
V+P+ VTY V++ + K+ EA +++ D+V +++ C ++++
Sbjct: 666 VKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVV---------YYTIMINRYCHLNDLKK 716
Query: 364 ACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAG 422
+++ +++ V + + + K K RN+ E + V + Y LI
Sbjct: 717 VYALFKDMKR----REIVPDVVTYTVLLKNK--PERNLSREMKAFDVKPDVFYYTVLIDW 770
Query: 423 LCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
C+ G+L EA R++D M+E G P+A Y LI CK+G KE I + M E+G P+
Sbjct: 771 QCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPD 830
Query: 483 KSTY 486
Y
Sbjct: 831 VVPY 834
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 139/348 (39%), Gaps = 8/348 (2%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
+RG + + A L +E GI P V +N A VF N +
Sbjct: 298 VRGLCYEMRIEDAESVVLDMEKH-GIDPDVYVYSAIIEGHRKNMNIPKAVDVF-NKMLKK 355
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
N V + +L+ C++ A + E + + V Y G ++ A
Sbjct: 356 RKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEA 415
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + E+ KG APD YT L+ G C QG+ A +M +M+ G P+ V Y V+
Sbjct: 416 IELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGG 475
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
EA L+ M +G P+ V++ L + G +++A + L ++
Sbjct: 476 LATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND 535
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLC-ERGELCEAARLWDD 438
++++ C G + A F E S+ Y TL LC E+ + +A L D
Sbjct: 536 ---ASMVKGFCAAGCLDHAFERFIRLEFPLPKSV--YFTLFTSLCAEKDYISKAQDLLDR 590
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M + G P Y LI +C+V N ++ E + +P+ TY
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTY 638
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 115/257 (44%), Gaps = 12/257 (4%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
+++ LC +E A V+ +M G+ P+V Y+ ++ G+ ++ A+ V ++L K
Sbjct: 297 VVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKR 356
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
+ + ++ +C+ G A + + E + + V Y V +A K K EA+
Sbjct: 357 KRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAI 416
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS----DNTVASTLI 386
L +M KG P ++ C +G + + + ++ ++ G+ D + + L
Sbjct: 417 ELFREMTGKGIAPDVINYTTLIGGCCLQG---KCSDAFDLMIEMDGTGKTPDIVIYNVLA 473
Query: 387 HWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRA 445
L G EA + E V + +T+N +I GL + GEL +A ++ + K R
Sbjct: 474 GGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRE 533
Query: 446 PNAFTYNLLINGFCKVG 462
+A ++ GFC G
Sbjct: 534 NDA----SMVKGFCAAG 546
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 67/129 (51%), Gaps = 2/129 (1%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
F V P+V +L+ CK+ ++ A R+ D+M+ G+ P+ YT ++ G +
Sbjct: 755 FDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKE 814
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A + +++ G PD YT L+ G CR G ++ A+K++ +M E G++P + + +
Sbjct: 815 AKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV-- 872
Query: 319 AYCKWKKPG 327
Y K K G
Sbjct: 873 HYAKLKAKG 881
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 91/204 (44%), Gaps = 7/204 (3%)
Query: 193 KNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
K F V P+VV I++ C +N+++ + +M +VP+VV+YT ++
Sbjct: 686 KREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPE 745
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
R ++ M+ PD YTVL+D C+ G L A ++ D M E+GV P+
Sbjct: 746 R-NLSREMKAFD------VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAP 798
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR 372
Y +I CK EA + + M+ G P ++ C G V +A ++ + +
Sbjct: 799 YTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEML 858
Query: 373 KICGSDNTVASTLIHWLCKKGKVL 396
+ + + +H+ K K L
Sbjct: 859 EKGIKPTKASLSAVHYAKLKAKGL 882
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 141/285 (49%), Gaps = 6/285 (2%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
++G+ P+ LL ALCK V+ A +V ++M PN+ +T+++ G+ G +
Sbjct: 195 KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLM 253
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A VL ++ + G PD +T L+ G+ G++ A +M+DM + G +PN Y V+I
Sbjct: 254 EAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLI 313
Query: 318 EAYCKW-KKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK--I 374
+A C+ K+ EA+ + +M R G ++ C+ G +++ V +RK +
Sbjct: 314 QALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGV 373
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAA 433
S T ++ KK + E + E+ + G LL YN +I C+ GE+ EA
Sbjct: 374 MPSQVTYMQIMVAHE-KKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAV 432
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
RLW++M G +P T+ ++INGF G E +EM G
Sbjct: 433 RLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRG 477
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 208/504 (41%), Gaps = 61/504 (12%)
Query: 57 LHPKLLASLISRQHDP-HLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESL 115
L P L+ ++SR D +L + F A T H +++ + LS+ R F + L
Sbjct: 95 LRPGLIIRVLSRCGDAGNLGYRFFLWA-TKQPGYFHSYEVCKSMVMILSKMRQFGAVWGL 153
Query: 116 LSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXX 175
+ + + +P+ + V +R + A A+ + + G+ P
Sbjct: 154 IEEMRKTNPELI----EPELFVVLMRRFASANMVKKAVEVLDEM-PKYGLEPDEYVFGCL 208
Query: 176 XXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG 235
+N + A VF++ R +F PN+ LL C+ ++ A VL +M G
Sbjct: 209 LDALCKNGSVKEASKVFEDMREKF--PPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAG 266
Query: 236 LVPNVVSYTTVMGGYAWRGDM------------------------------------DGA 259
L P++V +T ++ GYA G M D A
Sbjct: 267 LEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEA 326
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
MRV E+ G D TYT L+ GFC+ G + V+DDM + GV P++VTY ++ A
Sbjct: 327 MRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVA 386
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKIC---G 376
+ K ++ E + L+E M R+G P + V+ + C+ G V+ A +W + G
Sbjct: 387 HEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPG 446
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNT---LIAGLCERGELCEAA 433
D V +I+ +G ++EA N F+E + S Y T L+ L +L A
Sbjct: 447 VDTFV--IMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAK 504
Query: 434 RLWDDMVEKGRA--PNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXX 491
+W + K + N + + I+ G+ KE +M E +P +TY
Sbjct: 505 DVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTY----- 559
Query: 492 XXXXXXXMNQEINKVVALAMSTGV 515
+N+ N+ +A ++ V
Sbjct: 560 -AKLMKGLNKLYNRTIAAEITEKV 582
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 141/318 (44%), Gaps = 12/318 (3%)
Query: 208 CNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVS---YTTVMGGYAWRGDMDGAMRVLG 264
C ++ L K+ + +++EM P ++ + +M +A + A+ VL
Sbjct: 134 CKSMVMILSKMRQFGAVWGLIEEMRKTN--PELIEPELFVVLMRRFASANMVKKAVEVLD 191
Query: 265 EVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWK 324
E+ G PD + L+D C+ G + A KV +DM E PN + ++ +C+
Sbjct: 192 EMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREK-FPPNLRYFTSLLYGWCREG 250
Query: 325 KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAST 384
K EA +L M G P + ++ G + A ++ +RK N T
Sbjct: 251 KLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYT 310
Query: 385 -LIHWLCKKGKVL-EARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
LI LC+ K + EA VF E E G A ++TY LI+G C+ G + + + DDM +
Sbjct: 311 VLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXMNQ 501
KG P+ TY ++ K +E + ++E+M GC P+ Y + +
Sbjct: 371 KGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKE 430
Query: 502 EI---NKVVALAMSTGVD 516
+ N++ A +S GVD
Sbjct: 431 AVRLWNEMEANGLSPGVD 448
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 1/208 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ +V S N ++ LCK +E A L EM G+ PN+V++ T + GY+ RGD+
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
VL ++L G+ PD T++++++ CR + A +M E G++PNE+TY ++I +
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRS 539
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSD 378
C +V L M G P + C+ V++A E+ + + +I D
Sbjct: 540 CCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPD 599
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFE 406
N STLI L + G+ EAR +F E
Sbjct: 600 NFTYSTLIKALSESGRESEAREMFSSIE 627
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 151/361 (41%), Gaps = 74/361 (20%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G+ P+ N ++ AL K N +++A +M G P+ +Y ++ G +G +D
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+R++ ++ +G P+ TYT+L+DGF GR+ A+K ++ M + PNE T +
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVH 293
Query: 319 AYCKWKKPGEAVNLLEDMVRK-----------------------------------GHVP 343
+ P +A +L + K G++P
Sbjct: 294 GIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIP 353
Query: 344 SSGL----------------CCKVVDVLCEEG----------------NVERACEVWRVL 371
S C++ D G N +R E R L
Sbjct: 354 DSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYL 413
Query: 372 RKICGSDNTVAS-----TLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCE 425
+++ G D ++S +I LCK ++ A E + ++ +L+T+NT ++G
Sbjct: 414 KQM-GVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV 472
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
RG++ + + + ++ G P+ T++L+IN C+ K+ +EM E G PN+ T
Sbjct: 473 RGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEIT 532
Query: 486 Y 486
Y
Sbjct: 533 Y 533
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 8/257 (3%)
Query: 235 GLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAA 294
G +P+ ++ M D+ R+ + +G P Y VLV R
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Query: 295 IKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDV 354
+ + M +G+ + +Y +I+ CK ++ A L +M +G P+ +
Sbjct: 410 DRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 355 LCEEGNVERACEVWRVLRKIC----GSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGS 409
G+V++ V VL K+ D S +I+ LC+ ++ +A + F+E E G
Sbjct: 470 YSVRGDVKK---VHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGI 526
Query: 410 VASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIR 469
+ +TYN LI C G+ + +L+ M E G +P+ + YN I FCK+ K+
Sbjct: 527 EPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEE 586
Query: 470 ILEEMCENGCLPNKSTY 486
+L+ M G P+ TY
Sbjct: 587 LLKTMLRIGLKPDNFTY 603
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 89/174 (51%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+SPN+V+ N L +V+ VL+++L G P+V++++ ++ ++ A
Sbjct: 455 GISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDA 514
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
E+L+ G P+ TY +L+ C G ++K+ M+ENG+ P+ Y I++
Sbjct: 515 FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQS 574
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
+CK +K +A LL+ M+R G P + ++ L E G A E++ + +
Sbjct: 575 FCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIER 628
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 121/257 (47%), Gaps = 2/257 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV P +L++AL R L +M GL+ +V SY V+ ++ A
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
L E+ D+G +P+ T+ + G+ +G + V++ + +G +P+ +T+ ++I
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
C+ K+ +A + ++M+ G P+ ++ C G+ +R+ +++ +++ S +
Sbjct: 505 LCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPD 564
Query: 380 TVA-STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
A + I CK KV +A + + G TY+TLI L E G EA ++
Sbjct: 565 LYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFS 624
Query: 438 DMVEKGRAPNAFTYNLL 454
+ G P+++T L+
Sbjct: 625 SIERHGCVPDSYTKRLV 641
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 111/241 (46%), Gaps = 9/241 (3%)
Query: 112 MESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGL-------AGKPDSALRTFLRIESRLG 164
+++LL+ ++L G D L++++ Y A + ++A ++ R G
Sbjct: 397 VQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDR-G 455
Query: 165 IRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVA 224
I P++ + H V + G P+V++ ++++ LC+ E++ A
Sbjct: 456 ISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVH-GFKPDVITFSLIINCLCRAKEIKDA 514
Query: 225 VRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDG 284
EML G+ PN ++Y ++ GD D ++++ ++ + G +PD Y +
Sbjct: 515 FDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQS 574
Query: 285 FCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS 344
FC+ ++ A +++ M G++P+ TY +I+A + + EA + + R G VP
Sbjct: 575 FCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPD 634
Query: 345 S 345
S
Sbjct: 635 S 635
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 126/317 (39%), Gaps = 41/317 (12%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
++L AL + + +++ +L E+ G + ++G + G V ++
Sbjct: 114 SVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISF 173
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
G P Y ++D + L A M +G +P+ TY ++I CK E
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA---CEVWRVLRKICGSDNTVASTL 385
A+ L++ M ++G+ P+ ++D G V+ A E+ RV RK+ ++ T+ T
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRV-RKLNPNEATI-RTF 291
Query: 386 IHWL------CKKGKVL-----------------------------EARNVFEEF-EGGS 409
+H + CK +VL E + E G
Sbjct: 292 VHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGY 351
Query: 410 VASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIR 469
+ T+N ++ L + +L E R++D V +G P Y +L+ EG R
Sbjct: 352 IPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDR 411
Query: 470 ILEEMCENGCLPNKSTY 486
L++M +G L + +Y
Sbjct: 412 YLKQMGVDGLLSSVYSY 428
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 164 GIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEV 223
G +P V + K + A FK +G+ PN ++ NIL+++ C + +
Sbjct: 490 GFKPDVITFSLIINCLCRAKEIKDAFDCFK-EMLEWGIEPNEITYNILIRSCCSTGDTDR 548
Query: 224 AVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVD 283
+V++ +M GL P++ +Y + + + A +L +L G PD TY+ L+
Sbjct: 549 SVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIK 608
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
GR A ++ +E +G P+ T
Sbjct: 609 ALSESGRESEAREMFSSIERHGCVPDSYT 637
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 116/226 (51%), Gaps = 9/226 (3%)
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
+D+ PDA TY +L+ G + G A+K+ D+M + V+P VT+G +I CK +
Sbjct: 144 IDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRV 203
Query: 327 GEAVNLLEDMVR-KGHVPSSGLCCKVVDVLCEEGNVERAC----EVWRVLRKICGSDNTV 381
EA+ + DM++ G P+ + ++ LC+ G + A E + K+ D +
Sbjct: 204 KEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKV---DAAI 260
Query: 382 ASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMV 440
STLI L K G+ E + EE E G +TYN LI G C + A R+ D+MV
Sbjct: 261 YSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMV 320
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
EKG P+ +YN+++ F ++ +E + E+M GC P+ +Y
Sbjct: 321 EKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSY 366
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 140/304 (46%), Gaps = 2/304 (0%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I G +G D AL+ F + + ++P+ ++ R + A + + +
Sbjct: 159 IHGCSQSGCFDDALKLFDEMVKK-KVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVY 217
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV P V L+KALC++ E+ A ++ DE + + Y+T++ G +
Sbjct: 218 GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEV 277
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+L E+ +KG PD TY VL++GFC + +A +V+D+M E G++P+ ++Y +++
Sbjct: 278 SMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGV 337
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSD 378
+ + KK EA L EDM R+G P + V D LCE E A + +L K
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPR 397
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+ LC+ GK+ V G ++ +I +C+ + ++ L +
Sbjct: 398 RDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCKEPVISDSIDLLLN 457
Query: 439 MVEK 442
V++
Sbjct: 458 TVKE 461
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 108/201 (53%), Gaps = 4/201 (1%)
Query: 289 GRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLC 348
G L + + ++E G +P+ TY ++I + +A+ L ++MV+K P+
Sbjct: 132 GELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTF 190
Query: 349 CKVVDVLCEEGNVERACEVWRVLRKICGSDNTV--ASTLIHWLCKKGKVLEARNVFEE-F 405
++ LC++ V+ A ++ + K+ G TV ++LI LC+ G++ A + +E +
Sbjct: 191 GTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAY 250
Query: 406 EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
EG Y+TLI+ L + G E + + ++M EKG P+ TYN+LINGFC +++
Sbjct: 251 EGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSE 310
Query: 466 EGIRILEEMCENGCLPNKSTY 486
R+L+EM E G P+ +Y
Sbjct: 311 SANRVLDEMVEKGLKPDVISY 331
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 122/239 (51%), Gaps = 2/239 (0%)
Query: 238 PNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKV 297
+VV T ++ G+ A + E+ +KG P+ TY ++D FC GR A ++
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 298 MDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCE 357
+ M E + P+ VT+ +I A+ K +K EA + ++M+R P++ ++D C+
Sbjct: 68 LRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK 127
Query: 358 EGNVERACEVWRVL-RKICGSDNTVASTLIHWLCKKGKVLEARNVF-EEFEGGSVASLLT 415
+ V+ A + + K C D STLI+ CK +V +F E G VA+ +T
Sbjct: 128 QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT 187
Query: 416 YNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
Y TLI G C+ G+L A L ++M+ G AP+ T++ ++ G C ++ ILE++
Sbjct: 188 YTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 35/215 (16%)
Query: 273 PDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNL 332
D T +VD C+ G + A + +M E G+ PN +TY MI+++C + +A L
Sbjct: 8 ADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQL 67
Query: 333 LEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKK 392
L M+ K P D S LI+ K+
Sbjct: 68 LRHMIEKQINP----------------------------------DIVTFSALINAFVKE 93
Query: 393 GKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTY 451
KV EA +++E S+ + +TYN++I G C++ + +A R+ D M KG +P+ T+
Sbjct: 94 RKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTF 153
Query: 452 NLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ LING+CK G+ I EM G + N TY
Sbjct: 154 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTY 188
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 121/261 (46%), Gaps = 38/261 (14%)
Query: 181 QNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNV 240
++ H A ++F + G+ PNV++ N ++ + C A ++L M+ + P++
Sbjct: 22 KDGNHINAQNLFTEMHEK-GIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDI 80
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD 300
V+++ ++ + + A + E+L P TY ++DGFC+Q R+ A +++D
Sbjct: 81 VTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDS 140
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
M G P+ VT+ +I YCK K+ + + +M R+G V
Sbjct: 141 MASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVA----------------- 183
Query: 361 VERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNT 418
NTV +TLIH C+ G + A+++ E VA +T++
Sbjct: 184 ------------------NTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 225
Query: 419 LIAGLCERGELCEAARLWDDM 439
++AGLC + EL +A + +D+
Sbjct: 226 MLAGLCSKKELRKAFAILEDL 246
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 91/174 (52%), Gaps = 1/174 (0%)
Query: 165 IRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVA 224
I P + V+ ++ A ++K R+ + P ++ N ++ CK + V+ A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYK-EMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 225 VRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDG 284
R+LD M G P+VV+++T++ GY +D M + E+ +G + TYT L+ G
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 285 FCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVR 338
FC+ G L AA ++++M GV P+ +T+ M+ C K+ +A +LED+ +
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 64/111 (57%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
+S G SP+VV+ + L+ CK V+ + + EM G+V N V+YTT++ G+
Sbjct: 139 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 198
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN 304
GD+D A +L E++ G APD T+ ++ G C + L A +++D++++
Sbjct: 199 GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/492 (21%), Positives = 194/492 (39%), Gaps = 67/492 (13%)
Query: 45 TIQPPIKPWPHRLHPKLLASLISRQHDPHLSLQIFRHAQT-----HHRASSHHPLPYRAI 99
+I+ + W H L +L +H +LQ FR + H R + +
Sbjct: 107 SIRDLVPEWDHSLVYNVLHGAKKLEH----ALQFFRWTERSGLIRHDRDTHMKMIKMLGE 162
Query: 100 FLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRI 159
KL+ ARC LL + P ED V I YG AG +++ F ++
Sbjct: 163 VSKLNHARCI-----LLDMPEKGVP------WDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 160 ESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVN 219
+ LG+ +++ ++ R+ +A F N GV P + N++L
Sbjct: 212 KD-LGVERTIKSYNSLFKVILRRGRYMMAKRYF-NKMVSEGVEPTRHTYNLMLWGFFLSL 269
Query: 220 EVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYT 279
+E A+R ++M G+ P+ ++ T++ G+ MD A ++ E+ P +YT
Sbjct: 270 RLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYT 329
Query: 280 VLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRK 339
++ G+ R+ +++ ++M +G++PN TY ++ C K EA N+L++M+ K
Sbjct: 330 TMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAK 389
Query: 340 GHVP-SSGLCCKVVDVLCEEGNVERACEVWRVL--------------------------R 372
P + + K++ + G++ A EV + + R
Sbjct: 390 HIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNR 449
Query: 373 KICGSDNTVAST------------------LIHWLCKKGKVLEARNVFEEFEGGSVASLL 414
I D + +I +LC G+ +A +F + V
Sbjct: 450 AIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQD 509
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
N LI G + G + + M +G + Y LLI + G + L+ M
Sbjct: 510 ALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSM 569
Query: 475 CENGCLPNKSTY 486
E+G +P+ S +
Sbjct: 570 VEDGHVPDSSLF 581
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 131/284 (46%), Gaps = 20/284 (7%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLV----------PNVVSYTTVMGGYAWRGDMDGA 259
+L++ CK + A+++LD ++ ++ P+ +Y ++ G A
Sbjct: 436 VLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPS--AYNPIIEYLCNNGQTAKA 493
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ +++ +G D L+ G ++G ++ +++ M GV Y ++I++
Sbjct: 494 EVLFRQLMKRG-VQDQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKS 552
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL--RKICGS 377
Y +PG+A L+ MV GHVP S L V++ L E+G V+ A V ++ + +
Sbjct: 553 YMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIE 612
Query: 378 DN-TVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARL 435
DN + + ++ L +G V EA + + G A L ++L++ L E+G+ A +L
Sbjct: 613 DNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADL---DSLLSVLSEKGKTIAALKL 669
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
D +E+ + +Y+ +++ G +L ++ E G
Sbjct: 670 LDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGS 713
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 129/319 (40%), Gaps = 24/319 (7%)
Query: 60 KLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTL 119
KLL +LI ++ I RH T P Y I L + E L L
Sbjct: 452 KLLDTLIEKE-------IILRHQDTLE----MEPSAYNPIIEYLCNNGQTAKAEVLFRQL 500
Query: 120 PRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXX 179
+ Q +D L IRG+ G PDS+ L+I SR G+ P
Sbjct: 501 MKRGVQD------QDALNNLIRGHAKEGNPDSSYE-ILKIMSRRGV-PRESNAYELLIKS 552
Query: 180 VQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEML--GMGLV 237
+K +S G P+ ++++L + V+ A RV+ M+ +G+
Sbjct: 553 YMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIE 612
Query: 238 PNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKV 297
N+ ++ RG ++ A+ + + G D + L+ +G+ +AA+K+
Sbjct: 613 DNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDS---LLSVLSEKGKTIAALKL 669
Query: 298 MDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCE 357
+D E + +Y +++A K A ++L ++ KG +++ L +
Sbjct: 670 LDFGLERDLSLEFSSYDKVLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSSDELIKSLNQ 729
Query: 358 EGNVERACEVWRVLRKICG 376
EGN ++A + R+++K G
Sbjct: 730 EGNTKQADVLSRMIKKGQG 748
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 6/299 (2%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEV-EVAVRVLDEMLGMGLVP---NVVSYTTVMGG 249
N+ ++G+ PN V+CNI++ ALC+ + ++L+E+L ++V T +M
Sbjct: 215 NTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDS 274
Query: 250 YAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
G++ A+ V E+ K D+ Y V++ G C G +VAA M DM + GV P+
Sbjct: 275 CFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPD 334
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
TY +I A CK K EA +L M G P ++ LC G+V RA E
Sbjct: 335 VFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLL 394
Query: 370 VLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFE-EFEGGSVASLLTYNTLIAGLCERG 427
+ K + + +I + G A +V G ++ T N LI G + G
Sbjct: 395 SMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGG 454
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L +A + ++M P+ TYNLL+ C +G+ + ++ +EM GC P+ TY
Sbjct: 455 RLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITY 513
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 138/263 (52%), Gaps = 6/263 (2%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
+++ LC +++ A+ + +M+ G++P ++++ ++ G G ++ A ++ E+ + G
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG-EA 329
+P+ +Y L+ G C + A+ + + M + G++PN VT +++ A C+ G
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 330 VNLLEDMV--RKGHVPSSGLCCKVV-DVLCEEGNVERACEVWRVL-RKICGSDNTVASTL 385
LLE+++ + + P + C ++ D + GNV +A EVW+ + +K +D+ V + +
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 386 IHWLCKKGKVLEARNVF-EEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
I LC G ++ A + + G + TYNTLI+ LC+ G+ EA L M G
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 445 APNAFTYNLLINGFCKVGNAKEG 467
AP+ +Y ++I G C G+
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRA 389
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 124/252 (49%), Gaps = 10/252 (3%)
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
++++M +G +D A+ + +++ G P T+ L++G C+ G + A ++ +M
Sbjct: 124 HSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMR 183
Query: 303 ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVE 362
E G PN V+Y +I+ C +A+ L M + G P+ C +V LC++G +
Sbjct: 184 EMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIG 243
Query: 363 RACEVWRVLRKICGS-------DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLL 414
+ ++L +I S D + + L+ K G V++A V++E +V A +
Sbjct: 244 NNNK--KLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSV 301
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
YN +I GLC G + A DMV++G P+ FTYN LI+ CK G E + M
Sbjct: 302 VYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTM 361
Query: 475 CENGCLPNKSTY 486
G P++ +Y
Sbjct: 362 QNGGVAPDQISY 373
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 150/348 (43%), Gaps = 10/348 (2%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPS-----VRXXXXXXXXXVQNKRHRLAHSVF 192
T I+G D AL F ++ GIRP+ + + N +L +
Sbjct: 196 TLIKGLCSVNNVDKALYLF-NTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEIL 254
Query: 193 KNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
+S+ + ++V C IL+ + K V A+ V EM + + V Y ++ G
Sbjct: 255 DSSQANAPL--DIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCS 312
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
G+M A + +++ +G PD TY L+ C++G+ A + M+ GV P++++
Sbjct: 313 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQIS 372
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR 372
Y V+I+ C A L M++ +P L V+D G+ A V ++
Sbjct: 373 YKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLML 432
Query: 373 KICGSDNTVAST-LIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELC 430
N + LIH K G++++A V E + TYN L+ C G L
Sbjct: 433 SYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLR 492
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
A +L+D+M+ +G P+ TY L+ G C G K+ +L + G
Sbjct: 493 LAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATG 540
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 137/328 (41%), Gaps = 41/328 (12%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV P +++ N LL LCK +E A ++ EM MG PN VSY T++ G ++D A
Sbjct: 151 GVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKA 210
Query: 260 M------------------------------------RVLGEVLDKGWAP---DATTYTV 280
+ ++L E+LD A D T+
Sbjct: 211 LYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTI 270
Query: 281 LVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKG 340
L+D + G +V A++V +M + V + V Y V+I C A + DMV++G
Sbjct: 271 LMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRG 330
Query: 341 HVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-ICGSDNTVASTLIHWLCKKGKVLEAR 399
P ++ LC+EG + AC++ ++ D +I LC G V A
Sbjct: 331 VNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRAN 390
Query: 400 NVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
S+ +L +N +I G G+ A + + M+ G PN +T N LI+G+
Sbjct: 391 EFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 459 CKVGNAKEGIRILEEMCENGCLPNKSTY 486
K G + + EM P+ +TY
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTY 478
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 106/221 (47%), Gaps = 1/221 (0%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F + GV+P+V + N L+ ALCK + + A + M G+ P+ +SY ++ G
Sbjct: 322 FMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLC 381
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
GD++ A L +L P+ + V++DG+ R G +A+ V++ M GV+PN
Sbjct: 382 IHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVY 441
Query: 312 TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RV 370
T +I Y K + +A + +M P + ++ C G++ A +++ +
Sbjct: 442 TNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEM 501
Query: 371 LRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA 411
LR+ C D + L+ LC KG++ +A ++ + +
Sbjct: 502 LRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGIT 542
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
+GV PNV + N L+ K + A V +EM + P+ +Y ++G G +
Sbjct: 434 YGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRL 493
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A ++ E+L +G PD TYT LV G C +GRL A ++ ++ G+ + V + ++ +
Sbjct: 494 AFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAK 553
Query: 319 AYCKWKKPGEA 329
Y + ++PGEA
Sbjct: 554 KYTRLQRPGEA 564
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 2/151 (1%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I GYG G SAL + L + G++P+V V+ R A V KN
Sbjct: 412 IDGYGRYGDTSSAL-SVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV-KNEMRST 469
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
+ P+ + N+LL A C + + +A ++ DEML G P++++YT ++ G W+G + A
Sbjct: 470 KIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKA 529
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGR 290
+L + G D + +L + R R
Sbjct: 530 ESLLSRIQATGITIDHVPFLILAKKYTRLQR 560
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 145/346 (41%), Gaps = 4/346 (1%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
++GY G A +E R G+ P V R A V K
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKR-GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAG- 403
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
V PN + LL E + +VL EM +G+ P+ Y V+ + +D A
Sbjct: 404 DVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
M +L +G PD T+ L+D C+ GR + A ++ + ME G P TY +MI +
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSD 378
Y ++ + LL M +G +P+ +VDV + G A E ++ +
Sbjct: 524 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 583
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWD 437
+T+ + LI+ ++G +A N F G SLL N+LI E EA +
Sbjct: 584 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQ 643
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNK 483
M E G P+ TY L+ +V ++ + EEM +GC P++
Sbjct: 644 YMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDR 689
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 155/384 (40%), Gaps = 39/384 (10%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I G+ +G P AL+ L + G+ + R A ++F+ R
Sbjct: 276 IMGFAKSGDPSKALQ-LLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQS- 333
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P + N LLK K ++ A ++ EM G+ P+ +Y+ ++ Y G + A
Sbjct: 334 GIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESA 393
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
VL E+ P++ ++ L+ GF +G +V+ +M+ GV+P+ Y V+I+
Sbjct: 394 RIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDT 453
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN-----------VERAC--- 365
+ K+ A+ + M+ +G P ++D C+ G R C
Sbjct: 454 FGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPC 513
Query: 366 --------------EVWRVLRKICGS-------DNTVA-STLIHWLCKKGKVLEARNVFE 403
E W ++++ G N V +TL+ K G+ +A E
Sbjct: 514 ATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLE 573
Query: 404 EFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
E + G S YN LI +RG +A + M G P+ N LIN F +
Sbjct: 574 EMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDR 633
Query: 463 NAKEGIRILEEMCENGCLPNKSTY 486
E +L+ M ENG P+ TY
Sbjct: 634 RDAEAFAVLQYMKENGVKPDVVTY 657
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 127/285 (44%), Gaps = 2/285 (0%)
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
+V N ++ K + A+++L GL + +++ A G A +
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 264 GEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKW 323
E+ G P Y L+ G+ + G L A ++ +ME+ GV P+E TY ++I+AY
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 324 KKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVA 382
+ A +L++M P+S + +++ + G ++ +V + ++ I D
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 383 STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+ +I K + A F+ G +T+NTLI C+ G A +++ M
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+G P A TYN++IN + + R+L +M G LPN T+
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTH 552
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 130/320 (40%), Gaps = 39/320 (12%)
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMG----------------- 248
++ N L+ A + N++E A+ ++ +M G + V+Y+ V+
Sbjct: 198 LTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLY 257
Query: 249 --------------------GYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQ 288
G+A GD A+++LG G + T ++
Sbjct: 258 KEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADS 317
Query: 289 GRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLC 348
GR + A + +++ ++G++P Y +++ Y K +A +++ +M ++G P
Sbjct: 318 GRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTY 377
Query: 349 CKVVDVLCEEGNVERACEVWRVLRKICGSDNT-VASTLIHWLCKKGKVLEARNVFEEFEG 407
++D G E A V + + N+ V S L+ +G+ + V +E +
Sbjct: 378 SLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 408 -GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKE 466
G YN +I + L A +D M+ +G P+ T+N LI+ CK G
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 497
Query: 467 GIRILEEMCENGCLPNKSTY 486
+ E M GCLP +TY
Sbjct: 498 AEEMFEAMERRGCLPCATTY 517
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 148/301 (49%), Gaps = 13/301 (4%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVP-NVVSYTTVMGGYAW 252
N+ R GVSP+ +C L+ LC +V++A ++ E + V + V Y ++ G+
Sbjct: 173 NAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCK 232
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
G ++ A + + G PD TY VL++ + L A VM +M +G+Q + +
Sbjct: 233 AGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYS 292
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLC-----CKVVDVLCEEGNVERACEV 367
Y +++ +C+ P + N MV++ + G C +++ C N +A +
Sbjct: 293 YNQLLKRHCRVSHPDKCYNF---MVKE--MEPRGFCDVVSYSTLIETFCRASNTRKAYRL 347
Query: 368 WRVLRKICGSDNTVAST-LIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCE 425
+ +R+ N V T LI ++G A+ + ++ E G + Y T++ LC+
Sbjct: 348 FEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK 407
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
G + +A +++DM+E P+A +YN LI+G C+ G E I++ E+M C P++ T
Sbjct: 408 SGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELT 467
Query: 486 Y 486
+
Sbjct: 468 F 468
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 156/354 (44%), Gaps = 9/354 (2%)
Query: 132 GEDPLVTA----IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRL 187
G +P V + I G AGK A+ + + R G+ P + ++ L
Sbjct: 144 GREPDVVSYTILINGLFRAGKVTDAVEIWNAM-IRSGVSPDNKACAALVVGLCHARKVDL 202
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A+ + V + V N L+ CK +E A + M +G P++V+Y ++
Sbjct: 203 AYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL 262
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVM-DDMEENGV 306
Y + A V+ E++ G DA +Y L+ CR M +ME G
Sbjct: 263 NYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF 322
Query: 307 QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE 366
+ V+Y +IE +C+ +A L E+M +KG V + ++ EGN A +
Sbjct: 323 -CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKK 381
Query: 367 VWRVLRKICGS-DNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLC 424
+ + ++ S D +T++ LCK G V +A VF + E ++YN+LI+GLC
Sbjct: 382 LLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLC 441
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
G + EA +L++DM K P+ T+ +I G + ++ ++M + G
Sbjct: 442 RSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKG 495
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 132/272 (48%), Gaps = 2/272 (0%)
Query: 193 KNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
K+ ++ G P++V+ N+LL N ++ A V+ EM+ G+ + SY ++ +
Sbjct: 243 KSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCR 302
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
D + + ++ D +Y+ L++ FCR A ++ ++M + G+ N VT
Sbjct: 303 VSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVT 362
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VL 371
Y +I+A+ + A LL+ M G P ++D LC+ GNV++A V+ ++
Sbjct: 363 YTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMI 422
Query: 372 RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELC 430
D ++LI LC+ G+V EA +FE+ +G LT+ +I GL +L
Sbjct: 423 EHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLS 482
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
A ++WD M++KG + + LI C +
Sbjct: 483 AAYKVWDQMMDKGFTLDRDVSDTLIKASCSMS 514
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 155/345 (44%), Gaps = 39/345 (11%)
Query: 180 VQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPN 239
V+ R LA +++ + + G S + + + LCKV + ++ +L +M +G +P+
Sbjct: 55 VRESRFELAEAIYWDMKP-MGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPD 113
Query: 240 VVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMD 299
+ ++ + + A++ ++ +G PD +YT+L++G R G++ A+++ +
Sbjct: 114 IWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWN 173
Query: 300 DMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCK-VVDVLCEE 358
M +GV P+ ++ C +K A ++ + ++ V S + ++ C+
Sbjct: 174 AMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKA 233
Query: 359 GNVERACEVWRVLRKI-CGSDNTVASTLIHW----------------LCKKGKVLEARN- 400
G +E+A + + KI C D + L+++ + + G L+A +
Sbjct: 234 GRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSY 293
Query: 401 -------------------VFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+ +E E +++Y+TLI C +A RL+++M +
Sbjct: 294 NQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQ 353
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
KG N TY LI F + GN+ ++L++M E G P++ Y
Sbjct: 354 KGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFY 398
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 133/320 (41%), Gaps = 46/320 (14%)
Query: 209 NILLKALCKVNEVEVAVRVLDEM--LGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
N + L + + E+A + +M +G L+P +Y+ + G D +L ++
Sbjct: 48 NRFIGVLVRESRFELAEAIYWDMKPMGFSLIP--FTYSRFISGLCKVKKFDLIDALLSDM 105
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
G+ PD + V +D CR+ ++ A++ M + G +P+ V+Y ++I + K
Sbjct: 106 ETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKV 165
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS----DNTVA 382
+AV + M+R G P + C +V LC V+ A E+ V +I + V
Sbjct: 166 TDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEM--VAEEIKSARVKLSTVVY 223
Query: 383 STLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+ LI CK G++ +A + G L+TYN L+ + L A + +MV
Sbjct: 224 NALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVR 283
Query: 442 KGRAPNAFTYN-----------------------------------LLINGFCKVGNAKE 466
G +A++YN LI FC+ N ++
Sbjct: 284 SGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRK 343
Query: 467 GIRILEEMCENGCLPNKSTY 486
R+ EEM + G + N TY
Sbjct: 344 AYRLFEEMRQKGMVMNVVTY 363
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 109/284 (38%), Gaps = 38/284 (13%)
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD 300
++Y + + G +D A++V E+ + + Y + R+ R A + D
Sbjct: 10 LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEE-- 358
M+ G TY I CK KK LL DM G +P +D+LC E
Sbjct: 70 MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129
Query: 359 ---------------------------------GNVERACEVWR-VLRKICGSDNTVAST 384
G V A E+W ++R DN +
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAA 189
Query: 385 LIHWLCKKGKV-LEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEK 442
L+ LC KV L V EE + V S + YN LI+G C+ G + +A L M +
Sbjct: 190 LVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKI 249
Query: 443 GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G P+ TYN+L+N + K ++ EM +G + +Y
Sbjct: 250 GCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSY 293
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A+ VF N ++P+ +S N L+ LC+ V A+++ ++M G P+ +++ ++
Sbjct: 414 AYGVF-NDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII 472
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFC 286
GG + A +V +++DKG+ D L+ C
Sbjct: 473 GGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 8/292 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
+ P+ S +I++ L K N+V++AV +L +++ GL+P + Y ++ G G + +
Sbjct: 434 AILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEES 493
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+++LGE+ D G P T + + V A+ ++ M G +P +++
Sbjct: 494 LKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKK 553
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-- 377
C+ + +A L+D+ +G + +D L + V+R E++ R IC +
Sbjct: 554 LCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELF---RDICANGH 610
Query: 378 --DNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAAR 434
D LI LCK + +EA +F E G ++ TYN++I G C+ GE+
Sbjct: 611 CPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLS 670
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M E + P+ TY LI+G C G E I EM C PN+ T+
Sbjct: 671 CIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITF 722
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 143/332 (43%), Gaps = 42/332 (12%)
Query: 187 LAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTV 246
L H + +N G+ P + N +++ +CK E ++++L EM G+ P+ + +
Sbjct: 461 LLHDIVQN-----GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCI 515
Query: 247 MGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME---- 302
G A R D GA+ +L ++ G+ P T LV C GR V A K +DD+
Sbjct: 516 YGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGF 575
Query: 303 -------------------------------ENGVQPNEVTYGVMIEAYCKWKKPGEAVN 331
NG P+ + Y V+I+A CK + EA
Sbjct: 576 LGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADI 635
Query: 332 LLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHWLC 390
L +MV KG P+ ++D C+EG ++R + R+ D ++LIH LC
Sbjct: 636 LFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLC 695
Query: 391 KKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAF 449
G+ EA + E +G + +T+ LI GLC+ G EA + +M EK P++
Sbjct: 696 ASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSA 755
Query: 450 TYNLLINGFCKVGNAKEGIRILEEMCENGCLP 481
Y L++ F N G I EM G P
Sbjct: 756 VYLSLVSSFLSSENINAGFGIFREMVHKGRFP 787
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 153/353 (43%), Gaps = 56/353 (15%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNE--VEVAVRVLDEMLGMGLVPNVVSYTT 245
A SVF R PN + N LL+A+ K N VE+ L EM G + + T
Sbjct: 160 ASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTP 219
Query: 246 VMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
V+ Y G + A+ V E+L +GW D T+LV FC+ G++ A ++++ +EE
Sbjct: 220 VLQVYCNTGKSERALSVFNEILSRGWL-DEHISTILVVSFCKWGQVDKAFELIEMLEERD 278
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERAC 365
++ N TY V+I + K + +A L E M R G L ++ LC+ ++E A
Sbjct: 279 IRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMAL 338
Query: 366 EVWRVLRK-------------ICGSD-----NTVASTLIHWLCKKGKVLEARNVFEEF-- 405
++ +++ +C + + +I + KK +L +++FE F
Sbjct: 339 SLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIR 398
Query: 406 ------------------EGGSVASLL---------------TYNTLIAGLCERGELCEA 432
E V+ ++ + + +I L + ++ A
Sbjct: 399 NDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMA 458
Query: 433 ARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
L D+V+ G P YN +I G CK G ++E +++L EM + G P++ T
Sbjct: 459 VTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFT 511
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 174/408 (42%), Gaps = 71/408 (17%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I G+ + D A + F ++ R+G+ + ++K +A S++ + R
Sbjct: 290 IHGFVKESRIDKAFQLFEKMR-RMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIK-RS 347
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLG---------------MGLVPNVV--- 241
G+ P+ IL K LC +E R+ + ++G G + N +
Sbjct: 348 GIPPDR---GILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHE 404
Query: 242 SYTTV---MGGYAWRGDMDGAMRVLGEVLD--KGWAPDATTYTVLVDGFCRQGRLVAAIK 296
+Y+ + MG Y + DG ++ + D K PD+ + +++++ + ++ A+
Sbjct: 405 AYSFIQNLMGNY----ESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVT 460
Query: 297 VMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC 356
++ D+ +NG+ P + Y +IE CK + E++ LL +M G PS + L
Sbjct: 461 LLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLA 520
Query: 357 EEGNVERACEVWRVLRKICGSDNTVAST--LIHWLCKKGKVLEARNVFEE-----FEGGS 409
E + A ++ + +R G + + T L+ LC+ G+ ++A ++ F G
Sbjct: 521 ERCDFVGALDLLKKMR-FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHM 579
Query: 410 VAS-------------------------------LLTYNTLIAGLCERGELCEAARLWDD 438
VAS ++ Y+ LI LC+ EA L+++
Sbjct: 580 VASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNE 639
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
MV KG P TYN +I+G+CK G G+ + M E+ P+ TY
Sbjct: 640 MVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITY 687
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 129/286 (45%), Gaps = 26/286 (9%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A SVF +R + ++ + IL+ + CK +V+ A +++ + + N +Y ++
Sbjct: 233 ALSVFNEILSRGWLDEHIST--ILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLI 290
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G+ +D A ++ ++ G D Y VL+ G C+ L A+ + +++ +G+
Sbjct: 291 HGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIP 350
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVV-------DVLCEE-- 358
P+ G++ + C + + E + E ++ S L K + D++ E
Sbjct: 351 PDR---GILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYS 407
Query: 359 ------GNVER--ACEVWRVLR---KICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-E 406
GN E E+ ++L+ K D+ S +I+ L K KV A + + +
Sbjct: 408 FIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQ 467
Query: 407 GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYN 452
G + + YN +I G+C+ G E+ +L +M + G P+ FT N
Sbjct: 468 NGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLN 513
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 75/181 (41%), Gaps = 35/181 (19%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P+V++ ++L+KALCK A + +EM+ GL P V +Y +++ G+ G++D
Sbjct: 609 GHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRG 668
Query: 260 MRVLGEVLDKGWAPDATTYT-----------------------------------VLVDG 284
+ + + + PD TYT L+ G
Sbjct: 669 LSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQG 728
Query: 285 FCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS 344
C+ G A+ +MEE ++P+ Y ++ ++ + + +MV KG P
Sbjct: 729 LCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPV 788
Query: 345 S 345
S
Sbjct: 789 S 789
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 133/274 (48%), Gaps = 5/274 (1%)
Query: 210 ILLKALCKVNEVEVAV--RVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL 267
ILL C+ + ++ RVL+ M+ GL P+ V+ + G +D A ++ E+
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 268 DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN-GVQPNEVTYGVMIEAYCKWKKP 326
+K PD TY L+ C+ L + +D+M ++ V+P+ V++ ++I+ C K
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTL 385
EA+ L+ + G P L ++ C A V++ +++ D +TL
Sbjct: 247 REAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTL 306
Query: 386 IHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
I L K G+V EAR + + G TY +L+ G+C +GE A L ++M +G
Sbjct: 307 IFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGC 366
Query: 445 APNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
APN TYN L++G CK +G+ + E M +G
Sbjct: 367 APNDCTYNTLLHGLCKARLMDKGMELYEMMKSSG 400
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 128/286 (44%), Gaps = 36/286 (12%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLG-MGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
P+ + N LLK LCK ++ V +DEM + P++VS+T ++ ++ AM
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
++ ++ + G+ PD Y ++ GFC + A+ V M+E GV+P+++TY +I
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLS 311
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTV 381
K + EA L+ MV G+ P D
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEP----------------------------------DTAT 337
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMV 440
++L++ +C+KG+ L A ++ EE E G + TYNTL+ GLC+ + + L++ M
Sbjct: 338 YTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMK 397
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G + Y L+ K G E + + ++ L + S Y
Sbjct: 398 SSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAY 443
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 101/199 (50%), Gaps = 5/199 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P+ N ++K C +++ AV V +M G+ P+ ++Y T++ G + G ++ A
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
L ++D G+ PD TYT L++G CR+G + A+ ++++ME G PN+ TY ++
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSD 378
CK + + + L E M G S +V L + G V A EV+ + SD
Sbjct: 380 LCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSD 439
Query: 379 NTVASTL---IHWLCKKGK 394
+ STL + WL KK K
Sbjct: 440 ASAYSTLETTLKWL-KKAK 457
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 113/226 (50%), Gaps = 2/226 (0%)
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
R F V P++VS IL+ +C + A+ ++ ++ G P+ Y T+M G+
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
A+ V ++ ++G PD TY L+ G + GR+ A + M + G +P+ TY
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI- 374
++ C+ + A++LLE+M +G P+ ++ LC+ +++ E++ +++
Sbjct: 341 LMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSG 400
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFE-EFEGGSVASLLTYNTL 419
++ +TL+ L K GKV EA VF+ + S++ Y+TL
Sbjct: 401 VKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 107/473 (22%), Positives = 195/473 (41%), Gaps = 56/473 (11%)
Query: 56 RLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESL 115
R+ P ++A ++ +D ++ + F H + H Y A L+R F + L
Sbjct: 122 RVTPSIVAEVLKLGNDAAVAAKFF-HWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQL 180
Query: 116 LSTLPRHSPQQFLDHCGEDP----LVTAIRGYGLAGKPDSALRTFLRIES--RLGIRPSV 169
+ +D G P IR + LR + E + G +P V
Sbjct: 181 ---------PELMDSQGRPPSEKQFEILIR---MHADNRRGLRVYYVYEKMKKFGFKPRV 228
Query: 170 RXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLD 229
V+N LA +V+++ + G+ + IL+K LCK +E + +L
Sbjct: 229 FLYNRIMDALVKNGYFDLALAVYEDFKED-GLVEESTTFMILVKGLCKAGRIEEMLEILQ 287
Query: 230 EMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQG 289
M P+V +YT ++ G++D ++RV E+ PD Y LV G C+ G
Sbjct: 288 RMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDG 347
Query: 290 RLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCC 349
R+ ++ +M+ + + Y V+IE + K A NL ED+V G++ G+
Sbjct: 348 RVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYN 407
Query: 350 KVVDVLCEEGNVERACEVWR--------------------------------VLRKICGS 377
V+ LC V++A ++++ VL +I
Sbjct: 408 AVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGEL 467
Query: 378 DNTVASTLIHW---LC-KKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAA 433
V+ L + LC + K A +VF + S+ YN L+ L + G++ ++
Sbjct: 468 GYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSL 527
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L+ +M + G P++ +Y++ I F + G+ K E++ E C+P+ + Y
Sbjct: 528 SLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAY 580
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 160/388 (41%), Gaps = 47/388 (12%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
++G AG+ + L R+ L +P V V + V+ R R
Sbjct: 270 VKGLCKAGRIEEMLEILQRMRENL-CKPDVFAYTAMIKTLVSEGNLDASLRVWDEMR-RD 327
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
+ P+V++ L+ LCK VE + EM G ++ + Y ++ G+ G + A
Sbjct: 328 EIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSA 387
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ +++D G+ D Y ++ G C ++ A K+ E ++P+ T ++ A
Sbjct: 388 CNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVA 447
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC--EEGNVERACEVWRVLRKICGS 377
Y + + N+LE + G+ P S + +LC EE N A +V+ +L+
Sbjct: 448 YVVMNRLSDFSNVLERIGELGY-PVSDYLTQFFKLLCADEEKNA-MALDVFYILKTKGHG 505
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEE-----FEGGS----------------------- 409
+V + L+ L K G + ++ ++F E FE S
Sbjct: 506 SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFH 565
Query: 410 --------VASLLTYNTLIAGLCERGELCEAARLWDDM---VEKGRAPNAFTYNLLINGF 458
V S+ Y +L GLC+ GE+ L + VE G P F Y L +
Sbjct: 566 EKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESG--PMEFKYALTVCHV 623
Query: 459 CKVGNAKEGIRILEEMCENGCLPNKSTY 486
CK NA++ +++++EM + G N+ Y
Sbjct: 624 CKGSNAEKVMKVVDEMNQEGVFINEVIY 651
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 96/192 (50%), Gaps = 3/192 (1%)
Query: 183 KRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVS 242
+++ +A VF +T+ S +V NIL++AL K+ +++ ++ + EM +G P+ S
Sbjct: 487 EKNAMALDVFYILKTKGHGSVSVY--NILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSS 544
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
Y+ + + +GD+ A ++++ P Y L G C+ G + A + ++ +
Sbjct: 545 YSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECL 604
Query: 303 EN-GVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
N P E Y + + CK + + ++++M ++G + + C ++ + + G +
Sbjct: 605 GNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTI 664
Query: 362 ERACEVWRVLRK 373
+ A EV+ L+K
Sbjct: 665 KVAREVFTELKK 676
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 153/318 (48%), Gaps = 5/318 (1%)
Query: 169 VRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVL 228
VR ++ R + AHS+F N+ G P++++ L+ AL + + ++
Sbjct: 319 VRSRTKLMNGLIERGRPQEAHSIF-NTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 229 DEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQ 288
++ GL P+ + + ++ + G++D AM++ ++ + G P A+T+ L+ G+ +
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 289 GRLVAAIKVMDDM-EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGL 347
G+L + +++D M + +QPN+ T ++++A+C +K EA N++ M G P
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVT 497
Query: 348 CCKVVDVLCEEGNVERACE--VWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF 405
+ G+ A + + R+L + T+++ C++GK+ EA F
Sbjct: 498 FNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRM 557
Query: 406 -EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNA 464
E G +L +N+LI G ++ + D M E G P+ T++ L+N + VG+
Sbjct: 558 KELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDM 617
Query: 465 KEGIRILEEMCENGCLPN 482
K I +M E G P+
Sbjct: 618 KRCEEIYTDMLEGGIDPD 635
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 147/329 (44%), Gaps = 5/329 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I+GYG GK + + R + ++P+ R ++ A ++ ++
Sbjct: 429 TLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQS 488
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVR-VLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
+GV P+VV+ N L KA ++ A ++ ML + PNV + T++ GY G M
Sbjct: 489 -YGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKM 547
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
+ A+R + + G P+ + L+ GF + +V+D MEE GV+P+ VT+ +
Sbjct: 548 EEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTL 607
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG 376
+ A+ + DM+ G P + G E+A ++ +RK
Sbjct: 608 MNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGV 667
Query: 377 SDNTVAST-LIHWLCKKGKVLEARNVFEEFEG--GSVASLLTYNTLIAGLCERGELCEAA 433
N V T +I C G++ +A V+++ G G +L TY TLI G E + +A
Sbjct: 668 RPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAE 727
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
L DM K P T L+ +G+ +G
Sbjct: 728 ELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/444 (22%), Positives = 195/444 (43%), Gaps = 33/444 (7%)
Query: 56 RLHPKLLASLISRQHDPHLSLQIFRH-AQTHHRASSHHPLPYRAIFLKLSRARCFPEMES 114
R KL+ LI R P + IF + H+ S + Y + L+R + F + S
Sbjct: 320 RSRTKLMNGLIERGR-PQEAHSIFNTLIEEGHKPSL---ITYTTLVTALTRQKHFHSLLS 375
Query: 115 LLSTLPRH--SPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXX 172
L+S + ++ P L I +G D A++ F +++ G +P+
Sbjct: 376 LISKVEKNGLKPDTIL-------FNAIINASSESGNLDQAMKIFEKMKES-GCKPTASTF 427
Query: 173 XXXXXXXVQ----NKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVL 228
+ + RL + ++ + PN +CNIL++A C ++E A ++
Sbjct: 428 NTLIKGYGKIGKLEESSRLLDMMLRDEM----LQPNDRTCNILVQAWCNQRKIEEAWNIV 483
Query: 229 DEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR-VLGEVLDKGWAPDATTYTVLVDGFCR 287
+M G+ P+VV++ T+ YA G A ++ +L P+ T +V+G+C
Sbjct: 484 YKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCE 543
Query: 288 QGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK---PGEAVNLLEDMVRKGHVPS 344
+G++ A++ M+E GV PN + +I+ + GE V+L+E+ G P
Sbjct: 544 EGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEF---GVKPD 600
Query: 345 SGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFE 403
+++ G+++R E++ +L D S L + G+ +A +
Sbjct: 601 VVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILN 660
Query: 404 EF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE-KGRAPNAFTYNLLINGFCKV 461
+ + G +++ Y +I+G C GE+ +A +++ M G +PN TY LI GF +
Sbjct: 661 QMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEA 720
Query: 462 GNAKEGIRILEEMCENGCLPNKST 485
+ +L++M +P + T
Sbjct: 721 KQPWKAEELLKDMEGKNVVPTRKT 744
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 132/290 (45%), Gaps = 10/290 (3%)
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
+V S L+ L + + A + + ++ G P++++YTT++ + + ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 264 GEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKW 323
+V G PD + +++ G L A+K+ + M+E+G +P T+ +I+ Y K
Sbjct: 378 SKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKI 437
Query: 324 KKPGEAVNLLEDMVRKGHV-PSSGLCCKVVDVLCEEGNVERACEVWRVLRKI----CGSD 378
K E+ LL+ M+R + P+ C +V C + +E E W ++ K+ D
Sbjct: 438 GKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIE---EAWNIVYKMQSYGVKPD 494
Query: 379 NTVASTLIHWLCKKGKVLEARNVF--EEFEGGSVASLLTYNTLIAGLCERGELCEAARLW 436
+TL + G A ++ ++ T T++ G CE G++ EA R +
Sbjct: 495 VVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFF 554
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M E G PN F +N LI GF + + +++ M E G P+ T+
Sbjct: 555 YRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTF 604
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 105/436 (24%), Positives = 194/436 (44%), Gaps = 27/436 (6%)
Query: 59 PKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARC---FPEMESL 115
P + ++ + P L+++ F+ + S + P Y I L LSR+ F + S+
Sbjct: 99 PDEASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRSI 158
Query: 116 LSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXX 175
L ++ + + G V + G+ D L+ LR+ + ++ +
Sbjct: 159 LDSMVKSNVH------GNISTVNILIGF-FGNTED--LQMCLRLVKKWDLKMNSFTYKCL 209
Query: 176 XXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG 235
++++ + A V+ R R G ++ + N+LL AL K E A +V ++M
Sbjct: 210 LQAYLRSRDYSKAFDVYCEIR-RGGHKLDIFAYNMLLDALAKD---EKACQVFEDMKKRH 265
Query: 236 LVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAI 295
+ +YT ++ G D A+ + E++ +G + Y L+ + + AI
Sbjct: 266 CRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAI 325
Query: 296 KVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVL 355
+V M E G +PNE TY +++ G+ V L + + G+ +V L
Sbjct: 326 QVFSRMVETGCRPNEYTYSLLLNLLVA---EGQLVRLDGVVEISKRYMTQGIYSYLVRTL 382
Query: 356 CEEGNVERA----CEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSV 410
+ G+V A C++W K G ++ S ++ LC GK +EA + + E G V
Sbjct: 383 SKLGHVSEAHRLFCDMWSFPVK--GERDSYMS-MLESLCGAGKTIEAIEMLSKIHEKGVV 439
Query: 411 ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRI 470
+ YNT+ + L + ++ L++ M + G +P+ FTYN+LI F +VG E I I
Sbjct: 440 TDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINI 499
Query: 471 LEEMCENGCLPNKSTY 486
EE+ + C P+ +Y
Sbjct: 500 FEELERSDCKPDIISY 515
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 138/292 (47%), Gaps = 11/292 (3%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM--- 256
G++ NVV N L++ L K V+ A++V M+ G PN +Y+ ++ G +
Sbjct: 300 GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRL 359
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
DG + + + +G Y+ LV + G + A ++ DM V+ +Y M
Sbjct: 360 DGVVEISKRYMTQG------IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSM 413
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG 376
+E+ C K EA+ +L + KG V + + V L + + +++ ++K
Sbjct: 414 LESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGP 473
Query: 377 S-DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAAR 434
S D + LI + G+V EA N+FEE E +++YN+LI L + G++ EA
Sbjct: 474 SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ +M EKG P+ TY+ L+ F K + + EEM GC PN TY
Sbjct: 534 RFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTY 585
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 88/157 (56%), Gaps = 1/157 (0%)
Query: 189 HSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMG 248
H +F+ + + G SP++ + NIL+ + +V EV+ A+ + +E+ P+++SY +++
Sbjct: 462 HDLFEKMK-KDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLIN 520
Query: 249 GYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQP 308
GD+D A E+ +KG PD TY+ L++ F + R+ A + ++M G QP
Sbjct: 521 CLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQP 580
Query: 309 NEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSS 345
N VTY ++++ K + EAV+L M ++G P S
Sbjct: 581 NIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDS 617
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 123/279 (44%), Gaps = 39/279 (13%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
L++ L K+ V A R+ +M + SY +++ G A+ +L ++ +KG
Sbjct: 378 LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKG 437
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
D Y + + ++ + + M+++G P+ TY ++I ++ + + EA+
Sbjct: 438 VVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAI 497
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLC 390
N+ E++ R C D ++LI+ L
Sbjct: 498 NIFEELERSD----------------------------------CKPDIISYNSLINCLG 523
Query: 391 KKGKVLEARNVFEEF-EGGSVASLLTYNTLIA--GLCERGELCEAARLWDDMVEKGRAPN 447
K G V EA F+E E G ++TY+TL+ G ER E+ A L+++M+ KG PN
Sbjct: 524 KNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEM--AYSLFEEMLVKGCQPN 581
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
TYN+L++ K G E + + +M + G P+ TY
Sbjct: 582 IVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITY 620
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 95/190 (50%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV + + N + AL K+ ++ + ++M G P++ +Y ++ + G++D A
Sbjct: 437 GVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEA 496
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + E+ PD +Y L++ + G + A +M+E G+ P+ VTY ++E
Sbjct: 497 INIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMEC 556
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+ K ++ A +L E+M+ KG P+ ++D L + G A +++ +++ + +
Sbjct: 557 FGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPD 616
Query: 380 TVASTLIHWL 389
++ T++ L
Sbjct: 617 SITYTVLERL 626
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R P+++S N L+ L K +V+ A EM GL P+VV+Y+T+M + ++
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
A + E+L KG P+ TY +L+D + GR A+ + M++ G+ P+ +TY V+
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 136/289 (47%), Gaps = 4/289 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+S +VV+CN +L K +++ + EM+ + ++ GD+
Sbjct: 175 GISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIR--CLIRALCDGGDVSEG 232
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+L + L +G P Y L+ GFC G +V+ M P+ Y +I+
Sbjct: 233 YELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKG 292
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSD 378
C KK EA + +++ KG+ P + ++ CE+G + A ++W +++K +
Sbjct: 293 LCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPN 352
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ +IH K+G++ + E G ++L+ NT+I G C G+ EA ++
Sbjct: 353 EFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFK 412
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M E G PNA TYN LI GFCK ++G+++ +E+ G P+ Y
Sbjct: 413 NMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAY 461
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/411 (21%), Positives = 160/411 (38%), Gaps = 39/411 (9%)
Query: 59 PKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLST 118
P L+ Q++ SL FR +++ + P P L +LL
Sbjct: 80 PLFFGELLKSQNNVLFSLWFFRWLCSNY---DYTPGPVSLNIL----------FGALLDG 126
Query: 119 LPRHSPQQFLDHCGEDPLVTAIRGY----GLAGKPDSALRTFLRIESRLGIRPSVRXXXX 174
+ + FLD G P T + Y G + A+ + + +GI SV
Sbjct: 127 KAVKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVY-NVLKDMGISSSVVTCNS 185
Query: 175 XXXXXVQNKR--------HRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVR 226
++ ++ + S F + R R L++ALC +V
Sbjct: 186 VLLGCLKARKLDRFWELHKEMVESEFDSERIR-----------CLIRALCDGGDVSEGYE 234
Query: 227 VLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFC 286
+L + L GL P Y ++ G+ G+ VL ++ P Y ++ G C
Sbjct: 235 LLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLC 294
Query: 287 RQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSG 346
+ + A + ++++ G P+ V Y MI +C+ G A L +M++KG P+
Sbjct: 295 MNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEF 354
Query: 347 LCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF 405
++ + G + + +LR G +T+I C GK EA +F+
Sbjct: 355 AYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNM 414
Query: 406 -EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLI 455
E G + +TYN LI G C+ ++ + +L+ ++ G P+ Y L+
Sbjct: 415 SETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 2/226 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P L+ C++ VL M+ P++ Y ++ G A
Sbjct: 243 GLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEA 302
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + DKG+APD YT ++ GFC +G L +A K+ +M + G++PNE Y VMI
Sbjct: 303 YCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHG 362
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+ K + +M+R G+ + C ++ C G + A E+++ + + + N
Sbjct: 363 HFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPN 422
Query: 380 TVA-STLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGL 423
+ + LI CK+ KV + +++E + G S + Y L+ L
Sbjct: 423 AITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 77/185 (41%), Gaps = 15/185 (8%)
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
P V+ ++ A K A + L+ G P L + V L EEG VE A EV
Sbjct: 111 PGPVSLNILFGALLDGKAVKAAKSFLDTT---GFKPEPTLLEQYVKCLSEEGLVEEAIEV 167
Query: 368 WRVLRKICGSDNTVASTLIHWLCKKGKVLE------ARNVFEEFEGGSVASLLTYNTLIA 421
+ VL+ + S + V + C K + L+ V EF+ + LI
Sbjct: 168 YNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERI------RCLIR 221
Query: 422 GLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLP 481
LC+ G++ E L +++G P + Y LI+GFC++GN +L M P
Sbjct: 222 ALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFP 281
Query: 482 NKSTY 486
+ Y
Sbjct: 282 SMYIY 286
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 150/313 (47%), Gaps = 23/313 (7%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
AH + + R R G P+VV+ L+ C++ E+EVA +V DEM G+ PN ++ + ++
Sbjct: 181 AHKLVFDMRNR-GHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI 239
Query: 248 GGYAWRGDMDGAMRVLGEVL-----DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
GG+ D++ +++ E+ + + A + LVD CR+G ++ ++M
Sbjct: 240 GGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMS 299
Query: 303 ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVE 362
E YG MI++ C++++ A ++ M KG P ++ LC++G
Sbjct: 300 LCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCM 359
Query: 363 RACEVWRVLRKICGSD------NTVASTLIHWLCKKGKVLEARNVFEEF---EGGSVASL 413
RA +++L + GS+ L+ LCK+ +ARNV E EG +
Sbjct: 360 RA---YQLLEE--GSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRI 414
Query: 414 LTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEE 473
YN + GLC E + M++ P+ +T N +ING CK+G + +++L++
Sbjct: 415 --YNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDD 472
Query: 474 MCENG-CLPNKST 485
M C P+ T
Sbjct: 473 MMTGKFCAPDAVT 485
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 120/280 (42%), Gaps = 35/280 (12%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
NI L+ LC ++ + VL ML P+ + TV+ G G +D AM+VL +++
Sbjct: 416 NIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMT 475
Query: 269 -KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD-MEENGVQPNEVTYGVMIEAYCKWKKP 326
K APDA T ++ G QGR A+ V++ M EN ++P V Y +I K K
Sbjct: 476 GKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKG 535
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLI 386
EA+++ + + S ++D LC V+ A + W D+ + +
Sbjct: 536 DEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFW---------DDVIWPSGR 586
Query: 387 HWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
H Y + GLC+ G L +A D+ + G P
Sbjct: 587 H------------------------DAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIP 622
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
N YN +I + G +E +ILEEM +NG P+ T+
Sbjct: 623 NVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTW 662
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 129/291 (44%), Gaps = 4/291 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P S N ++ LCK A ++L+E P+ +Y +M D A
Sbjct: 337 GLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKA 396
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
VL +L K A Y + + G C + V+ M + +P+E T +I
Sbjct: 397 RNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVING 456
Query: 320 YCKWKKPGEAVNLLEDMVR-KGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGS 377
CK + +A+ +L+DM+ K P + V+ L +G E A +V RV+ +
Sbjct: 457 LCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIK 516
Query: 378 DNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARL 435
VA + +I L K K EA +VF + E SV A TY +I GLC ++ A +
Sbjct: 517 PGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKF 576
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
WDD++ +AF Y + G C+ G + L ++ ++G +PN Y
Sbjct: 577 WDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCY 627
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 148/344 (43%), Gaps = 45/344 (13%)
Query: 187 LAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVL------------------ 228
+AH VF R G+ PN ++ ++L+ K+ +VE +++
Sbjct: 215 VAHKVFDEMRV-CGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAA 273
Query: 229 ------DEMLGMGLVPNVVSYTTVMG-------GYAWRGDMD---------GAMRVLGEV 266
D M G ++ M +A+ +D GA R++ +
Sbjct: 274 AFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIM 333
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
KG P T+Y ++ G C+ G + A +++++ E P+E TY +++E+ CK
Sbjct: 334 KSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDT 393
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTL 385
G+A N+LE M+RK + + + LC N V +L+ C D +T+
Sbjct: 394 GKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTV 453
Query: 386 IHWLCKKGKVLEARNVFEEFEGGSVAS--LLTYNTLIAGLCERGELCEAARLWDD-MVEK 442
I+ LCK G+V +A V ++ G + +T NT++ GL +G EA + + M E
Sbjct: 454 INGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPEN 513
Query: 443 GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P YN +I G K+ E + + ++ + + +TY
Sbjct: 514 KIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTY 557
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 137/346 (39%), Gaps = 44/346 (12%)
Query: 149 PDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSC 208
PD ALR + R G RP R AH F G P+ +C
Sbjct: 71 PDEALRILDGLCLR-GYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLAS-GFIPDERTC 128
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMG--LVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
N+++ L + V+ ++G VP++ +Y +M + A +++ ++
Sbjct: 129 NVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDM 188
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
++G PD T+T L+ G+C L A KV D+M G++PN +T V+I + K +
Sbjct: 189 RNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDV 248
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAS--T 384
L++ E+W ++ + A+
Sbjct: 249 ETGRKLMK-------------------------------ELWEYMKNETDTSMKAAAFAN 277
Query: 385 LIHWLCKKGKVLEARNVFEEFEG----GSVASLLTYNTLIAGLCERGELCEAARLWDDMV 440
L+ +C++G ++FE E SV Y +I LC AAR+ M
Sbjct: 278 LVDSMCREGYF---NDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMK 334
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
KG P +YN +I+G CK G ++LEE E P++ TY
Sbjct: 335 SKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTY 380
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 104/229 (45%), Gaps = 37/229 (16%)
Query: 251 AWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
A R + D A+R+L + +G+ PD+ + ++ C GR A + +G P+E
Sbjct: 66 AVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDE 125
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMV--RKGHVPSSGLCCKVVDVLCEEGNVERACEVW 368
T V+I + P + ++ ++ +K VPS
Sbjct: 126 RTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSL----------------------- 162
Query: 369 RVLRKICGSDNTVASTLIHWLCKKGKVLEARN-VFEEFEGGSVASLLTYNTLIAGLCERG 427
T + L++ LC +V++A VF+ G + ++T+ TLI G CE
Sbjct: 163 -----------TNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIR 211
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE 476
EL A +++D+M G PN+ T ++LI GF K+ + + G ++++E+ E
Sbjct: 212 ELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWE 260
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLV-PNVVSYTTV 246
A V + T +P+ V+ N ++ L E A+ VL+ ++ + P VV+Y V
Sbjct: 466 AMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAV 525
Query: 247 MGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
+ G D AM V G++ D+TTY +++DG C ++ A K DD+
Sbjct: 526 IRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSG 585
Query: 307 QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE 366
+ + Y ++ C+ +A + L D+ G +P+ +C V C ++R E
Sbjct: 586 RHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNV-VCYNTVIAECSRSGLKR--E 642
Query: 367 VWRVLRKICGSDNTVASTLIHW 388
+++L ++ N A + W
Sbjct: 643 AYQILEEM--RKNGQAPDAVTW 662
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 86/213 (40%)
Query: 133 EDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVF 192
E L T I G G+ D A++ + + P + R A V
Sbjct: 447 EYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVL 506
Query: 193 KNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
+ P VV+ N +++ L K+++ + A+ V ++ + + +Y ++ G
Sbjct: 507 NRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCV 566
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
+D A + +V+ DA Y + G C+ G L A + D+ ++G PN V
Sbjct: 567 TNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVC 626
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSS 345
Y +I + EA +LE+M + G P +
Sbjct: 627 YNTVIAECSRSGLKREAYQILEEMRKNGQAPDA 659
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
Query: 324 KKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS---DNT 380
+ P EA+ +L+ + +G+ P S V+ LC+ G + A R L + D
Sbjct: 69 RNPDEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHR--RFLLFLASGFIPDER 126
Query: 381 VASTLIHWLCKKGKVLEARNVFEE---FEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ +I L + V F+ V SL YN L+ LC + +A +L
Sbjct: 127 TCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVF 186
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
DM +G P+ T+ LI G+C++ + ++ +EM G PN T
Sbjct: 187 DMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLT 234
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 78/181 (43%), Gaps = 1/181 (0%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNS 195
L T + G G+ + AL R+ I+P V + + A SVF
Sbjct: 486 LNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVF-GQ 544
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
+ V+ + + I++ LC N+V++A + D+++ + Y + G G
Sbjct: 545 LEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGY 604
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
+ A L ++ D G P+ Y ++ R G A +++++M +NG P+ VT+ +
Sbjct: 605 LSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRI 664
Query: 316 M 316
+
Sbjct: 665 L 665
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 142/281 (50%), Gaps = 4/281 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+S ++ NI + +LCK +E A +L + + +G++P+V++Y T++ GY +D A
Sbjct: 10 GISTKLL--NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEA 67
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
V + + G PD TTY L+ G + L +++ D+M +G+ P+ +Y ++
Sbjct: 68 YAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSC 127
Query: 320 YCKWKKPGEAVNLL-EDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
Y K + GEA +L ED+ G VP ++D LC+ G+ + A E+++ L+ +
Sbjct: 128 YFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPE 187
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ LI+ LCK +V + E + G + +TY T++ + + + +L+
Sbjct: 188 LMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFL 247
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
M ++G + F +++ K G A+E + E+ +G
Sbjct: 248 KMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 153/341 (44%), Gaps = 7/341 (2%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I+GY D A R+ GI P V +N +F +
Sbjct: 53 TLIKGYTRFIGIDEAYAVTRRMREA-GIEPDVTTYNSLISGAAKNLMLNRVLQLF-DEML 110
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGM-GLVPNVVSYTTVMGGYAWRGDM 256
G+SP++ S N L+ K+ A ++L E + + GLVP + +Y ++ G
Sbjct: 111 HSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHT 170
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
D A+ + L P+ TY +L++G C+ R+ + +M +++++G PN VTY M
Sbjct: 171 DNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTM 229
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKIC 375
++ Y K K+ + + L M ++G+ C VV L + G E A E + ++R
Sbjct: 230 LKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGT 289
Query: 376 GSDNTVA-STLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAA 433
S + V+ +TL++ K G + ++ EE E G T+ ++ GL G A
Sbjct: 290 RSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAE 349
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+ + E G P+ T N LI+G CK G+ +R+ M
Sbjct: 350 KHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 155/328 (47%), Gaps = 6/328 (1%)
Query: 162 RLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEV 221
RLG+ P V + A++V + R G+ P+V + N L+ K +
Sbjct: 41 RLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR-EAGIEPDVTTYNSLISGAAKNLML 99
Query: 222 EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD-KGWAPDATTYTV 280
+++ DEML GL P++ SY T+M Y G A ++L E + G P TY +
Sbjct: 100 NRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNI 159
Query: 281 LVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKG 340
L+D C+ G AI++ ++ V+P +TY ++I CK ++ G ++ ++ + G
Sbjct: 160 LLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG 218
Query: 341 HVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAS-TLIHWLCKKGKVLEAR 399
+ P++ ++ + + +E+ +++ ++K + + A+ ++ L K G+ EA
Sbjct: 219 YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAY 278
Query: 400 NVFEEF--EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
E G +++YNTL+ + G L L +++ KG P+ +T+ +++NG
Sbjct: 279 ECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNG 338
Query: 458 FCKVGNAKEGIRILEEMCENGCLPNKST 485
+GN + L + E G P+ T
Sbjct: 339 LLNIGNTGGAEKHLACIGEMGMQPSVVT 366
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 7/258 (2%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A +FK+ ++R V P +++ NIL+ LCK V ++ E+ G PN V+YTT++
Sbjct: 173 AIELFKHLKSR--VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTML 230
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
Y ++ +++ ++ +G+ D +V + GR A + M ++ +G +
Sbjct: 231 KMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTR 290
Query: 308 PNE-VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE 366
+ V+Y ++ Y K +LLE++ KG P +V+ L GN A +
Sbjct: 291 SQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEK 350
Query: 367 VWRVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCE 425
+ ++ + V + LI LCK G V A +F E V TY +++ LC+
Sbjct: 351 HLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME---VRDEFTYTSVVHNLCK 407
Query: 426 RGELCEAARLWDDMVEKG 443
G L A++L KG
Sbjct: 408 DGRLVCASKLLLSCYNKG 425
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
S ++VS N LL K ++ +L+E+ GL P+ ++T ++ G G+ GA +
Sbjct: 291 SQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEK 350
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
L + + G P T L+DG C+ G + A+++ ME +E TY ++ C
Sbjct: 351 HLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLC 406
Query: 322 KWKKPGEAVNLLEDMVRKG-HVPSSG 346
K + A LL KG +PSS
Sbjct: 407 KDGRLVCASKLLLSCYNKGMKIPSSA 432
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/415 (23%), Positives = 177/415 (42%), Gaps = 52/415 (12%)
Query: 78 IFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLV 137
I+ ++QT + S H Y A+ L + R F M L++ + ++ + + D +
Sbjct: 154 IWANSQTGYVHSGH---TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLV---TLDTMS 207
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
+R +GK + A+ FL +E
Sbjct: 208 KVMRRLAKSGKYNKAVDAFLEMEKS----------------------------------- 232
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+GV + ++ N L+ AL K N +E A V ++ + P+ ++ ++ G+ D
Sbjct: 233 -YGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKARKFD 290
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ + + PD TYT V+ +C++G +++++M ENG PN VTY +++
Sbjct: 291 DARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVM 350
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR------VL 371
+ K K+ EA+ + E M G VP + ++ +L + G + A E++ V
Sbjct: 351 HSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVR 410
Query: 372 RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELC 430
R + + +++ L H + L E+ EG S + ++ TY L+ C + ++
Sbjct: 411 RDVLVYNTMISAALHH--SRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMK 468
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
L MV+ + + TY LLI G C G +E EE G +P ST
Sbjct: 469 LLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDST 523
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 6/222 (2%)
Query: 270 GWAPDATTYTVLVD--GFCRQGRLV-AAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
G+ TY +VD G CR L+ + M+ EE+ + + VM K K
Sbjct: 161 GYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVM-RRLAKSGKY 219
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCK-VVDVLCEEGNVERACEVWRVLRKICGSDNTVASTL 385
+AV+ +M + V + + ++D L +E ++E A EV+ L D + L
Sbjct: 220 NKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNIL 279
Query: 386 IHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
IH CK K +AR + + + ++TY + + C+ G+ + ++M E G
Sbjct: 280 IHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGC 339
Query: 445 APNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
PN TY ++++ K E + + E+M E+GC+P+ Y
Sbjct: 340 NPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 104/443 (23%), Positives = 208/443 (46%), Gaps = 28/443 (6%)
Query: 56 RLHPKLLASLISRQHDPHLSLQIFRH-AQTHHRASSHHPLPYRAIFLKLSRARCFPEMES 114
R KL+ LI R PH + +F+ A+T HR S + Y + ++ + + + S
Sbjct: 46 RSRTKLMNVLIERGR-PHEAQTVFKTLAETGHRPS---LISYTTLLAAMTVQKQYGSISS 101
Query: 115 LLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXX 174
++S + + + LD + ++ A + +G + A++ L+++ LG+ P+
Sbjct: 102 IVSEVEQSGTK--LDSIFFNAVINA---FSESGNMEDAVQALLKMK-ELGLNPTTSTYNT 155
Query: 175 XXXXX-VQNKRHRLAHSV-FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEML 232
+ K R + + V PN+ + N+L++A CK +VE A V+ +M
Sbjct: 156 LIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME 215
Query: 233 GMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK-----GWAPDATTYTVLVDGFCR 287
G+ P+ V+Y T+ Y +G+ +R EV++K P+ T ++V G+CR
Sbjct: 216 ECGVRPDTVTYNTIATCYVQKGE---TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272
Query: 288 QGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK-WKKPG--EAVNLLEDMVRKGHVPS 344
+GR+ ++ + M+E V+ N V + +I + + + G E + L+++ K V +
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVIT 332
Query: 345 SGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFE 403
V++ G +E+A +V++ + K D S L + + +A + E
Sbjct: 333 YST---VMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLE 389
Query: 404 EFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGN 463
S +++ + T+I+G C G + +A R+++ M + G +PN T+ L+ G+ +V
Sbjct: 390 TLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQ 449
Query: 464 AKEGIRILEEMCENGCLPNKSTY 486
+ +L+ M G P ST+
Sbjct: 450 PWKAEEVLQMMRGCGVKPENSTF 472
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A VFK + GV P+ + +IL K + E + A +L+ ++ + PNVV +TTV+
Sbjct: 349 AAQVFKE-MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVI 406
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G+ G MD AMRV ++ G +P+ T+ L+ G+ + A +V+ M GV+
Sbjct: 407 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVK 466
Query: 308 PNEVTYGVMIEAY 320
P T+ ++ EA+
Sbjct: 467 PENSTFLLLAEAW 479
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 75/152 (49%), Gaps = 17/152 (11%)
Query: 383 STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+ L++ L ++G+ EA+ VF+ E G SL++Y TL+A + + + + + ++ +
Sbjct: 49 TKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQ 108
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXMNQ 501
G ++ +N +IN F + GN ++ ++ L +M E G P STY
Sbjct: 109 SGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTY--------------N 154
Query: 502 EINKVVALAMSTGVDGELWDLLVKHVVGNLDI 533
+ K +A EL DL+++ GN+D+
Sbjct: 155 TLIKGYGIAGKPERSSELLDLMLEE--GNVDV 184
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 1/288 (0%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A +VF R G +V+ N+++KA K E A+ + M G P+ +Y ++
Sbjct: 498 AETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLF 557
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
A +D A R+L E+LD G P TY ++ + R G L A+ + + ME+ GV+
Sbjct: 558 QMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVK 617
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
PNEV YG +I + + EA+ M G + + ++ + G +E A V
Sbjct: 618 PNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRV 677
Query: 368 WRVLRKICGSDNTVASTLIHWLCKK-GKVLEARNVFEEFEGGSVASLLTYNTLIAGLCER 426
+ ++ G + AS + LC G V EA ++F ++++ T++
Sbjct: 678 YDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGM 737
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
G L EA + ++M E G + ++N ++ + G E + EM
Sbjct: 738 GMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 124/280 (44%), Gaps = 2/280 (0%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
N L+ K + A + EML G+ + V++ T++ G + A +L ++ +
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
KG +PD TY +L+ G + AA++ + + G+ P+ VT+ ++ C+ K E
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAE 428
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHW 388
++ +M R ++ + EG V +A ++ + C +T + +I
Sbjct: 429 VEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDV 488
Query: 389 LCKKGKVLEARNVF--EEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
+KG +EA VF + G +L YN +I + +A L+ M +G P
Sbjct: 489 YAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWP 548
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ TYN L V E RIL EM ++GC P TY
Sbjct: 549 DECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTY 588
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 131/290 (45%), Gaps = 4/290 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV + V+ N ++ + A +L +M G+ P+ +Y ++ +A GD++ A
Sbjct: 335 GVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAA 394
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ ++ G PD T+ ++ C++ + V+ +M+ N ++ +E + V+++
Sbjct: 395 LEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQM 454
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
Y +A L E + V SS V+DV E+G A V+ R + G N
Sbjct: 455 YVNEGLVVQAKALFERF-QLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRN 513
Query: 380 TV--ASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLW 436
V + +I K +A ++F+ + G+ TYN+L L + EA R+
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M++ G P TY +I + ++G + + + E M + G PN+ Y
Sbjct: 574 AEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVY 623
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 130/323 (40%), Gaps = 10/323 (3%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV N + L+KA KV +E A RV D+M P+V + +++ A G + A
Sbjct: 650 GVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEA 709
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + +KG D ++ ++ + G L AI+V ++M E+G+ + ++ ++
Sbjct: 710 ESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMAC 768
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
Y + E L +M+ + + K + L ++G V E L+
Sbjct: 769 YAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGV--PSEAVSQLQTAYNEAK 826
Query: 380 TVASTLIH--WLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLW 436
+A+ I G A +E G + YN +I G++ A + +
Sbjct: 827 PLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAY 886
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL-PNKSTYXXXXXXXXX 495
M EKG P+ T L+ + K G EG++ + G L P++S +
Sbjct: 887 MRMQEKGLEPDIVTQAYLVGIYGKAGMV-EGVKRVHSRLTFGELEPSQSLFKAVRDAYVS 945
Query: 496 XXXMNQEINKVVALAMSTGVDGE 518
Q++ VV MS + E
Sbjct: 946 AN--RQDLADVVKKEMSIAFEAE 966
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 156/341 (45%), Gaps = 19/341 (5%)
Query: 51 KPWPHRLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLP--YRAIFLKLSRARC 108
K W L P + + DP L ++H + + + P Y + K +A+
Sbjct: 57 KDW---LAPNEVLKIFDNVKDPSFLLPAYQH---YSKRKDYQPTESLYALMINKFGQAKM 110
Query: 109 FPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYG-LAGKPDSALRTFLRIESRLGIRP 167
+ E+E ++ T+ +F E+ +R YG LAG+ + A+ + G P
Sbjct: 111 YDEIEEVMRTIKLEKRCRF----SEEFFYNLMRIYGNLAGRINRAIEILFGMPD-FGCWP 165
Query: 168 SVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRV 227
S + V K H +F S + GV + NIL+K LC+ +E A+++
Sbjct: 166 SSKSFNFILNLLVSAKLFDEIHKIFV-SAPKLGVEIDACCLNILIKGLCESGNLEAALQL 224
Query: 228 LDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCR 287
LDE PNV++++ ++ G+ +G + A ++L + + PD T+ +L+ G +
Sbjct: 225 LDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRK 284
Query: 288 QGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGL 347
+GR+ I +++ M+ G +PN TY ++ K+ EA ++ M+ G PS
Sbjct: 285 KGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLS 344
Query: 348 CCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHW 388
K+V LCE +V E+ VLR++ + V TL+ W
Sbjct: 345 YKKMVLGLCETKSV---VEMDWVLRQMV-NHGFVPKTLMWW 381
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP-- 326
K + P + Y ++++ F K+ D++EE V + +E C++ +
Sbjct: 89 KDYQPTESLYALMINKF-------GQAKMYDEIEE-------VMRTIKLEKRCRFSEEFF 134
Query: 327 --------------GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR 372
A+ +L M G PSS ++++L + +++
Sbjct: 135 YNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAP 194
Query: 373 KI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELC 430
K+ D + LI LC+ G + A + +EF + S +++T++ LI G C +G+
Sbjct: 195 KLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFE 254
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
EA +L + M ++ P+ T+N+LI+G K G +EGI +LE M GC PN TY
Sbjct: 255 EAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTY 310
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 91/208 (43%), Gaps = 18/208 (8%)
Query: 289 GRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGL- 347
GR+ AI+++ M + G P+ ++ ++ K L D + K V + L
Sbjct: 146 GRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAK--------LFDEIHKIFVSAPKLG 197
Query: 348 -----CCK--VVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEAR 399
CC ++ LCE GN+E A ++ + N + S LI C KGK EA
Sbjct: 198 VEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAF 257
Query: 400 NVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
+ E E + +T+N LI+GL ++G + E L + M KG PN TY ++ G
Sbjct: 258 KLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGL 317
Query: 459 CKVGNAKEGIRILEEMCENGCLPNKSTY 486
E ++ +M G P+ +Y
Sbjct: 318 LDKKRNLEAKEMMSQMISWGMRPSFLSY 345
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 6/292 (2%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
FG+ N S N+LL LCK VE A RV+ L + PN ++ + G+ ++
Sbjct: 184 FGLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+ + E+ G+ P +YT ++ +C+Q + +++ +ME NG PN +TY ++
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV-LRKICGS 377
+ K+ EA+ + M R G P S ++ L G +E A V+RV + ++ S
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 378 DNT-VASTLIHWLCKKGKVLEARNVFEEFEGGSVAS--LLTYNTLIAGLCERGELCEAAR 434
NT +++I C + +A + +E E ++ + + TY L+ +RG++ E +
Sbjct: 363 INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGK 422
Query: 435 LWDDMVEKGR-APNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
L +MV K + + TY LI C+ + + EEM P T
Sbjct: 423 LLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 156/358 (43%), Gaps = 16/358 (4%)
Query: 125 QQFLDHCGEDPLVT------AIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXX 178
++F++ D LVT +R + AG+ + A+ F R+ G+ +
Sbjct: 141 KEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRL-GEFGLEKNTESMNLLLDT 199
Query: 179 XVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVP 238
+ KR A V ++ ++PN + NI + CK N VE A+ + EM G G P
Sbjct: 200 LCKEKRVEQARVVLLQLKSH--ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRP 257
Query: 239 NVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVM 298
V+SYTT++ Y + + +L E+ G P++ TYT ++ Q A++V
Sbjct: 258 CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVA 317
Query: 299 DDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLE-DMVRKGHVPSSGLCCKVVDVLCE 357
M+ +G +P+ + Y +I + + EA + +M G ++ ++ + C
Sbjct: 318 TRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCH 377
Query: 358 EGNVERACEVWRVLR--KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASL-- 413
++A E+ + + +C D L+ K+G V+E + +E SL
Sbjct: 378 HDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDE 437
Query: 414 LTYNTLIAGLCERGELCEAAR-LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRI 470
TY LI LC R +CE A L+++M+ + P T LL+ K + RI
Sbjct: 438 STYTFLIQRLC-RANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 38/279 (13%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
+++ E E AV + D + GL N S ++ ++ A VL + L
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSH 219
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
P+A T+ + + G+C+ R+ A+ + +M+ +G +P ++Y +I YC+ + +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV-WRVLRKICGSDNTVASTLIHWL 389
+L +M G P+S ++ L + E A V R+ R C D+
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDS---------- 329
Query: 390 CKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWD-DMVEKGRAPNA 448
L YN LI L G L EA R++ +M E G + N
Sbjct: 330 ------------------------LFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINT 365
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEM-CENGCLPNKSTY 486
TYN +I +C + I +L+EM N C P+ TY
Sbjct: 366 STYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 136/315 (43%), Gaps = 50/315 (15%)
Query: 185 HRLAHSVFKNSRTRFGVSPNVVSC----------NILLKALCKVNEVEVAVRVLDEMLGM 234
H+L H + R+ G+ SC ++ + L K + + ++ M G
Sbjct: 91 HKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGD 150
Query: 235 GLVP-NVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVA 293
LV N V+ +M +A G+ + A+ + + + G + + +L+D C++ R+
Sbjct: 151 KLVTLNTVA--KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQ 208
Query: 294 AIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVD 353
A V+ ++ + + PN T+ + I +CK + EA+ +++M KGH G
Sbjct: 209 ARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEM--KGH----GF------ 255
Query: 354 VLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVAS 412
R C + +T+I C++ + ++ + E E GS +
Sbjct: 256 ---------RPCVI-------------SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPN 293
Query: 413 LLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILE 472
+TY T+++ L + E EA R+ M G P++ YN LI+ + G +E R+
Sbjct: 294 SITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
Query: 473 -EMCENGCLPNKSTY 486
EM E G N STY
Sbjct: 354 VEMPELGVSINTSTY 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 4/191 (2%)
Query: 150 DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCN 209
+ ALR R++ R G +P + R A VF+ GVS N + N
Sbjct: 311 EEALRVATRMK-RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLV-PNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
++ C +E + A+ +L EM L P+V +Y ++ RGD+ ++L E++
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 269 KG-WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG 327
K + D +TYT L+ CR A + ++M + P T +++E K K
Sbjct: 430 KHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEE-VKKKNMH 488
Query: 328 EAVNLLEDMVR 338
E+ +E +++
Sbjct: 489 ESAERIEHIMK 499
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 138/292 (47%), Gaps = 6/292 (2%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
FG+ N S N+LL LCK VE A RV+ L + PN ++ + G+ ++
Sbjct: 184 FGLEKNTESMNLLLDTLCKEKRVEQA-RVVLLQLKSHITPNAHTFNIFIHGWCKANRVEE 242
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+ + E+ G+ P +YT ++ +C+Q + +++ +ME NG PN +TY ++
Sbjct: 243 ALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMS 302
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV-LRKICGS 377
+ K+ EA+ + M R G P S ++ L G +E A V+RV + ++ S
Sbjct: 303 SLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVS 362
Query: 378 DNT-VASTLIHWLCKKGKVLEARNVFEEFEGGSVAS--LLTYNTLIAGLCERGELCEAAR 434
NT +++I C + +A + +E E ++ + + TY L+ +RG++ E +
Sbjct: 363 INTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGK 422
Query: 435 LWDDMVEKGR-APNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
L +MV K + + TY LI C+ + + EEM P T
Sbjct: 423 LLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRT 474
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 156/358 (43%), Gaps = 16/358 (4%)
Query: 125 QQFLDHCGEDPLVT------AIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXX 178
++F++ D LVT +R + AG+ + A+ F R+ G+ +
Sbjct: 141 KEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRL-GEFGLEKNTESMNLLLDT 199
Query: 179 XVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVP 238
+ KR A V ++ ++PN + NI + CK N VE A+ + EM G G P
Sbjct: 200 LCKEKRVEQARVVLLQLKSH--ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRP 257
Query: 239 NVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVM 298
V+SYTT++ Y + + +L E+ G P++ TYT ++ Q A++V
Sbjct: 258 CVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVA 317
Query: 299 DDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLE-DMVRKGHVPSSGLCCKVVDVLCE 357
M+ +G +P+ + Y +I + + EA + +M G ++ ++ + C
Sbjct: 318 TRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCH 377
Query: 358 EGNVERACEVWRVLR--KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASL-- 413
++A E+ + + +C D L+ K+G V+E + +E SL
Sbjct: 378 HDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDE 437
Query: 414 LTYNTLIAGLCERGELCEAAR-LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRI 470
TY LI LC R +CE A L+++M+ + P T LL+ K + RI
Sbjct: 438 STYTFLIQRLC-RANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERI 494
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 38/279 (13%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
+++ E E AV + D + GL N S ++ ++ A VL + L
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSH 219
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
P+A T+ + + G+C+ R+ A+ + +M+ +G +P ++Y +I YC+ + +
Sbjct: 220 ITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVY 279
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV-WRVLRKICGSDNTVASTLIHWL 389
+L +M G P+S ++ L + E A V R+ R C D+
Sbjct: 280 EMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDS---------- 329
Query: 390 CKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWD-DMVEKGRAPNA 448
L YN LI L G L EA R++ +M E G + N
Sbjct: 330 ------------------------LFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINT 365
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEM-CENGCLPNKSTY 486
TYN +I +C + I +L+EM N C P+ TY
Sbjct: 366 STYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTY 404
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 136/315 (43%), Gaps = 50/315 (15%)
Query: 185 HRLAHSVFKNSRTRFGVSPNVVSC----------NILLKALCKVNEVEVAVRVLDEMLGM 234
H+L H + R+ G+ SC ++ + L K + + ++ M G
Sbjct: 91 HKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGD 150
Query: 235 GLVP-NVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVA 293
LV N V+ +M +A G+ + A+ + + + G + + +L+D C++ R+
Sbjct: 151 KLVTLNTVA--KIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQ 208
Query: 294 AIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVD 353
A V+ ++ + + PN T+ + I +CK + EA+ +++M KGH G
Sbjct: 209 ARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQEM--KGH----GF------ 255
Query: 354 VLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVAS 412
R C + +T+I C++ + ++ + E E GS +
Sbjct: 256 ---------RPCVI-------------SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPN 293
Query: 413 LLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILE 472
+TY T+++ L + E EA R+ M G P++ YN LI+ + G +E R+
Sbjct: 294 SITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFR 353
Query: 473 -EMCENGCLPNKSTY 486
EM E G N STY
Sbjct: 354 VEMPELGVSINTSTY 368
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 4/191 (2%)
Query: 150 DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCN 209
+ ALR R++ R G +P + R A VF+ GVS N + N
Sbjct: 311 EEALRVATRMK-RSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLV-PNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
++ C +E + A+ +L EM L P+V +Y ++ RGD+ ++L E++
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 269 KG-WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG 327
K + D +TYT L+ CR A + ++M + P T +++E K K
Sbjct: 430 KHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEE-VKKKNMH 488
Query: 328 EAVNLLEDMVR 338
E+ +E +++
Sbjct: 489 ESAERIEHIMK 499
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 195/468 (41%), Gaps = 52/468 (11%)
Query: 57 LHPKLLASLISRQHDPHLSLQI--FRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMES 114
L L+ +++ R +P + Q F H +H R H Y L +AR + +
Sbjct: 75 LSDSLIETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARA 134
Query: 115 LLSTLPRHSP------QQFLDH---CGEDPLV--TAIRGYGLAGKPDSALRTFLRIESRL 163
L+ + +SP LD PLV ++ Y + F R+
Sbjct: 135 LIESSLLNSPPDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRL-CDC 193
Query: 164 GIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEV 223
G SV ++K L +++ + + + PN ++ I+++ LCK ++
Sbjct: 194 GFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDK-RIYPNEITIRIMIQVLCKEGRLKE 252
Query: 224 AVRVLDEMLGMGLVPNVV-----------------------------------SYTTVMG 248
V +LD + G +P+V+ Y+ V+
Sbjct: 253 VVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVY 312
Query: 249 GYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQP 308
A GD+ A +V E+L +G++ ++ YTV V C +G + A +++ +MEE+GV P
Sbjct: 313 AKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSP 372
Query: 309 NEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW 368
+ T+ +I + ++ + + E MV +G +PS ++V + + NV RA E+
Sbjct: 373 YDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEIL 432
Query: 369 -RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCER 426
+ + K D S LI + + +A +F E E ++ + +LI GLC
Sbjct: 433 TKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTC 492
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
G++ + M ++ PNA Y+ LI F K+G+ R+ EM
Sbjct: 493 GKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 119/299 (39%), Gaps = 46/299 (15%)
Query: 278 YTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMV 337
+ +LV + + L V + + G + +T +I K K + E +
Sbjct: 167 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAI 226
Query: 338 RKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-------------------- 377
K P+ ++ VLC+EG R EV +L +ICG
Sbjct: 227 DKRIYPNEITIRIMIQVLCKEG---RLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEM 283
Query: 378 -------------------DNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYN 417
D S +++ K+G ++ AR VF+E + G A+ Y
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 418 TLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCEN 477
+ CE+G++ EA RL +M E G +P T+N LI GF + G ++G+ E M
Sbjct: 344 VFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR 403
Query: 478 GCLPNKSTYXXXXXXXXXXXXMNQEINKVVALAMSTGV--DGELWDLLVKHVVGNLDIN 534
G +P+ S + +N+ N+++ ++ G D + L++ + DI+
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRA-NEILTKSIDKGFVPDEHTYSHLIRGFIEGNDID 461
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 72/138 (52%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+ + N ++K++ K+ V A +L + + G VP+ +Y+ ++ G+ D+D A
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+++ E+ + +P + L+ G C G++ A K + M++ ++PN Y +I+A
Sbjct: 464 LKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKA 523
Query: 320 YCKWKKPGEAVNLLEDMV 337
+ K A + +M+
Sbjct: 524 FQKIGDKTNADRVYNEMI 541
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 149/323 (46%), Gaps = 12/323 (3%)
Query: 96 YRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRT 155
Y A +L A+ F ++ +L ++F D ED ++ + YG +G + A +
Sbjct: 90 YSAFIRRLREAKKFSTIDEVL-----QYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKL 144
Query: 156 FLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKAL 215
F + L +V+ V +K+ A FK + G++P++V+ N ++KAL
Sbjct: 145 FDEM-PELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKAL 203
Query: 216 CKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDA 275
C+ ++ + + +E+ G P+++S+ T++ + R R+ + K +P+
Sbjct: 204 CRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNI 263
Query: 276 TTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLED 335
+Y V G R + A+ ++D M+ G+ P+ TY +I AY E + +
Sbjct: 264 RSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNE 323
Query: 336 MVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKICGSDNTVASTLIHWLCKKG 393
M KG P + C ++ +LC++G+++RA EV + K+ N + ++ L G
Sbjct: 324 MKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPN-MYKPVVERLMGAG 382
Query: 394 KVLEARNVFEEFEGGSVASLLTY 416
K+ EA + + G + S Y
Sbjct: 383 KIDEATQL---VKNGKLQSYFRY 402
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 118/269 (43%), Gaps = 38/269 (14%)
Query: 221 VEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK-GWAPDATTYT 279
E A ++ DEM + V S+ ++ Y +D AM+ E+ +K G PD TY
Sbjct: 138 AEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYN 197
Query: 280 VLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRK 339
++ CR+G + + + +++E+NG +P+ +++ ++E + + +
Sbjct: 198 TMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRE--------------- 242
Query: 340 GHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEA 398
L EG+ +W +++ S N + ++ + L + K +A
Sbjct: 243 ---------------LFVEGD-----RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDA 282
Query: 399 RNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
N+ + + ++ + TYN LI L E + +++M EKG P+ TY +LI
Sbjct: 283 LNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPL 342
Query: 458 FCKVGNAKEGIRILEEMCENGCLPNKSTY 486
CK G+ + + EE ++ L + Y
Sbjct: 343 LCKKGDLDRAVEVSEEAIKHKLLSRPNMY 371
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 102/238 (42%), Gaps = 34/238 (14%)
Query: 205 VVSCNILLKALCKVNEVEVAVRVLDEM-LGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
V S N LL A +++ A++ E+ +G+ P++V+Y T++ +G MD + +
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 264 GEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKW 323
E+ G+ PD ++ L++ F R+ V ++ D M+ + PN +Y + +
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 324 KKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAS 383
KK +A+NL++ M +G P ++ + N+E + + ++
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMK----------- 325
Query: 384 TLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
E G +TY LI LC++G+L A + ++ ++
Sbjct: 326 ----------------------EKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIK 361
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 5/178 (2%)
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR 372
Y I + KK +L+ + + S +++ + G E A +++ +
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMP 149
Query: 373 KICGSDNTVAS--TLIHWLCKKGKVLEARNVFEEF--EGGSVASLLTYNTLIAGLCERGE 428
++ + TV S L+ K+ EA F+E + G L+TYNT+I LC +G
Sbjct: 150 EL-NCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGS 208
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ + +++++ + G P+ ++N L+ F + EG RI + M PN +Y
Sbjct: 209 MDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSY 266
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 190/477 (39%), Gaps = 55/477 (11%)
Query: 53 WPHRLHPKLLASLISRQHDPHLSLQI-FRHAQTHHRASSHHPLPYRAIFLKLSRARCFPE 111
+ H + P L+A +I H SL + F + SH + Y +IF LS +R F
Sbjct: 41 FRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSA 100
Query: 112 MESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLG----IRP 167
M++L + S + LD L+ + L K SA F +E I P
Sbjct: 101 MDALFKQVK--SNKILLDSSVYRSLIDTL---VLGRKAQSA---FWVLEEAFSTGQEIHP 152
Query: 168 SVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRV 227
V + + A +F R + GVS N + + + C+ +E +R+
Sbjct: 153 DV--CNRLLAGLTSDGCYDYAQKLFVKMRHK-GVSLNTLGFGVYIGWFCRSSETNQLLRL 209
Query: 228 LDEMLGMGLVPN--VVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGF 285
+DE+ L N +++ + +MD A +L E+ + PD Y V+ + F
Sbjct: 210 VDEVKKANLNINGSIIALLILHSLCKCSREMD-AFYILEELRNIDCKPDFMAYRVIAEAF 268
Query: 286 CRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK-------------------- 325
G L V+ + GV P Y I K+
Sbjct: 269 VVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDN 328
Query: 326 --------------PGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
P AV L MV G +P+ K+ LC + + + +L
Sbjct: 329 DILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELL 388
Query: 372 R-KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLT-YNTLIAGLCERGEL 429
K S+ S +I +LCK G+V E+ +E + +A ++ YN LI C+ +
Sbjct: 389 SSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMI 448
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A +LWD+M +G N TYN+LI + G A+E +R+ ++M E G P+++ Y
Sbjct: 449 RPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIY 505
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 97/209 (46%), Gaps = 2/209 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P + + + L K LC+ ++ + ++ + + G + SY+ ++ G + +
Sbjct: 357 GKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAGRVRES 416
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
L E+ +G APD + Y L++ C+ + A K+ D+M G + N TY V+I
Sbjct: 417 YTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLTTYNVLIRK 476
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR--VLRKICGS 377
+ + E++ L + M+ +G P + +++ LC+E +E A EV+R + R
Sbjct: 477 LSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERDHKTV 536
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFE 406
V S + LC G EA + E E
Sbjct: 537 TRRVLSEFVLNLCSNGHSGEASQLLRERE 565
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 152/325 (46%), Gaps = 4/325 (1%)
Query: 164 GIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEV 223
G+ P + V+ R A +F+ S + FGV + S N LL+ LC+ + V
Sbjct: 181 GVNPDLECLTIAMDSFVRVHYVRRAIELFEESES-FGVKCSTESFNALLRCLCERSHVSA 239
Query: 224 AVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVD 283
A V + G + + SY ++ G++ G+++ +VL E+++ G+ PD +Y+ L++
Sbjct: 240 AKSVFNAKKG-NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIE 298
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVP 343
G R GR+ ++++ D+++ G P+ Y MI + + E++ M+ + P
Sbjct: 299 GLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEP 358
Query: 344 SSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNVF 402
+ K+V L + V A E++ +L + + ++ + LC G A ++
Sbjct: 359 NLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIY 418
Query: 403 EEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKV 461
++ + G S Y L+ L G+ +WD+M E G + Y +++G C +
Sbjct: 419 QKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCII 478
Query: 462 GNAKEGIRILEEMCENGCLPNKSTY 486
G+ + + ++EE G PN+ Y
Sbjct: 479 GHLENAVLVMEEAMRKGFCPNRFVY 503
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 128/269 (47%), Gaps = 4/269 (1%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A SVF + + + S NI++ K+ EVE +VL EM+ G P+ +SY+ ++
Sbjct: 240 AKSVFNAKKG--NIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLI 297
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G G ++ ++ + + KG PDA Y ++ F +++ M + +
Sbjct: 298 EGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECE 357
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
PN TY ++ K +K +A+ + E+M+ +G +P++GL + LC G A +
Sbjct: 358 PNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVI 417
Query: 368 WRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCE 425
++ RK C + L+ L + GK NV++E E G + + Y ++ GLC
Sbjct: 418 YQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCI 477
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLL 454
G L A + ++ + KG PN F Y+ L
Sbjct: 478 IGHLENAVLVMEEAMRKGFCPNRFVYSRL 506
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 117/259 (45%), Gaps = 10/259 (3%)
Query: 232 LGMGLVPNVVSYTTVMGGYAWRGDMDG-AMRVLGE--VLDKGWAPDATTYTVLVDGFCRQ 288
LG+GL ++V+ V+ RG++ G AM + V + G D +Y+V++ R+
Sbjct: 111 LGIGLSIDIVA--DVLN----RGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRR 164
Query: 289 GRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLC 348
+ V+ M GV P+ + ++++ + A+ L E+ G S+
Sbjct: 165 KLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESF 224
Query: 349 CKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EG 407
++ LCE +V A V+ + D+ + +I K G+V E V +E E
Sbjct: 225 NALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVES 284
Query: 408 GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEG 467
G L+Y+ LI GL G + ++ ++D++ KG P+A YN +I F + E
Sbjct: 285 GFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDES 344
Query: 468 IRILEEMCENGCLPNKSTY 486
+R M + C PN TY
Sbjct: 345 MRYYRRMLDEECEPNLETY 363
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PN+ + + L+ L K +V A+ + +EML G++P T+ + G AM +
Sbjct: 358 PNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVI 417
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+ G + Y +L+ R G+ + V D+M+E+G + Y +++ C
Sbjct: 418 YQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCI 477
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
AV ++E+ +RKG P+ + ++ L E A +++ ++K ++N
Sbjct: 478 IGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENA 535
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 3/270 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G PN V+ N L+ + + N + A+ V ++M G P+ V+Y T++ +A G +D
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
AM + + G +PD TY+V+++ + G L AA K+ +M + G PN VTY +M+
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICG 376
+ + K + A+ L DM G P V++VL G +E A V+ + +K
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARL 435
D V L+ K G V +A ++ G ++ T N+L++ ++ EA L
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
+M+ G P+ TY LL++ C G +K
Sbjct: 632 LQNMLALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 2/278 (0%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
++ L + + ++LDEM+ G PN V+Y ++ Y ++ AM V ++ + G
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
PD TY L+D + G L A+ + M+ G+ P+ TY V+I K A
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-DNTVASTLIHWL 389
L +MV +G P+ ++D+ + N + A +++R ++ D S ++ L
Sbjct: 490 KLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 549
Query: 390 CKKGKVLEARNVFEEFEGGS-VASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
G + EA VF E + + + Y L+ + G + +A + + M+ G PN
Sbjct: 550 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNV 609
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
T N L++ F +V E +L+ M G P+ TY
Sbjct: 610 PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G+ D TYT +V R + A K++D+M +G QPN VTY +I +Y + EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHW 388
+N+ M G P C ++D+ + G ++ A ++++ ++ S +T S +I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 389 LCKKGKVLEARNVF-EEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
L K G + A +F E + G +L+TYN ++ + A +L+ DM G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
TY++++ G +E + EM + +P++ Y
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 115/246 (46%), Gaps = 2/246 (0%)
Query: 242 SYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
+YTT++G ++L E++ G P+ TY L+ + R L A+ V + M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
+E G +P+ VTY +I+ + K A+++ + M G P + +++ L + G++
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 362 ERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTL 419
A +++ ++ + C + + ++ K A ++ + + G +TY+ +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
+ L G L EA ++ +M +K P+ Y LL++ + K GN ++ + + M G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 480 LPNKST 485
PN T
Sbjct: 606 RPNVPT 611
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/383 (23%), Positives = 164/383 (42%), Gaps = 8/383 (2%)
Query: 43 SYTIQPPIK-PWPHRLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFL 101
S + P K P + K SL+ + DP L+I R A + + A
Sbjct: 30 STILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAASLTPDCRIDR-IAFSAAVE 88
Query: 102 KLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIES 161
L+ + F + +LL + P D E AI Y A D +LR F +E
Sbjct: 89 NLAEKKHFSAVSNLLDGFIENRP----DLKSERFAAHAIVLYAQANMLDHSLRVFRDLE- 143
Query: 162 RLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEV 221
+ I +V+ + K ++ A V+ +G+ P++ + N ++K C+
Sbjct: 144 KFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSA 203
Query: 222 EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVL 281
+ ++ EM G+ PN S+ ++ G+ D +VL + D+G +TY +
Sbjct: 204 SSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIR 263
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
+ C++ + A ++D M G++PN VTY +I +C EA L + MV +G
Sbjct: 264 IQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGC 323
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKICGSDNTVASTLIHWLCKKGKVLEARN 400
P S ++ LC+ G+ E A + + + K ++ +L++ L K KV EA+
Sbjct: 324 KPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKE 383
Query: 401 VFEEFEGGSVASLLTYNTLIAGL 423
+ + + ++ +N + A L
Sbjct: 384 LIGQVKEKFTRNVELWNEVEAAL 406
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 113/270 (41%), Gaps = 36/270 (13%)
Query: 217 KVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK-GWAPDA 275
+ N ++ ++RV ++ + V S ++ D A RV E+ G PD
Sbjct: 128 QANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDL 187
Query: 276 TTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLED 335
TY ++ FC G ++ ++ +ME G++PN ++G+MI + K E +L
Sbjct: 188 ETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAM 247
Query: 336 MVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKV 395
M +G V++ N+ I LCK+ K
Sbjct: 248 MKDRG-----------VNIGVSTYNIR-----------------------IQSLCKRKKS 273
Query: 396 LEARNVFE-EFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLL 454
EA+ + + G + +TY+ LI G C + EA +L+ MV +G P++ Y L
Sbjct: 274 KEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTL 333
Query: 455 INGFCKVGNAKEGIRILEEMCENGCLPNKS 484
I CK G+ + + + +E E +P+ S
Sbjct: 334 IYYLCKGGDFETALSLCKESMEKNWVPSFS 363
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 33/182 (18%)
Query: 305 GVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
G++P+ TY MI+ +C+ + +++ +M RKG P+S ++ E +++
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAE---DKS 238
Query: 365 CEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLC 424
EV +VL +++ R G + TYN I LC
Sbjct: 239 DEVGKVL----------------------AMMKDR--------GVNIGVSTYNIRIQSLC 268
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
+R + EA L D M+ G PN TY+ LI+GFC + +E ++ + M GC P+
Sbjct: 269 KRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSE 328
Query: 485 TY 486
Y
Sbjct: 329 CY 330
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 3/270 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G PN V+ N L+ + + N + A+ V ++M G P+ V+Y T++ +A G +D
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
AM + + G +PD TY+V+++ + G L AA K+ +M + G PN VTY +M+
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICG 376
+ + K + A+ L DM G P V++VL G +E A V+ + +K
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARL 435
D V L+ K G V +A ++ G ++ T N+L++ ++ EA L
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
+M+ G P+ TY LL++ C G +K
Sbjct: 632 LQNMLALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 2/278 (0%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
++ L + + ++LDEM+ G PN V+Y ++ Y ++ AM V ++ + G
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
PD TY L+D + G L A+ + M+ G+ P+ TY V+I K A
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-DNTVASTLIHWL 389
L +MV +G P+ ++D+ + N + A +++R ++ D S ++ L
Sbjct: 490 KLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 549
Query: 390 CKKGKVLEARNVFEEFEGGS-VASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
G + EA VF E + + + Y L+ + G + +A + + M+ G PN
Sbjct: 550 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNV 609
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
T N L++ F +V E +L+ M G P+ TY
Sbjct: 610 PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G+ D TYT +V R + A K++D+M +G QPN VTY +I +Y + EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHW 388
+N+ M G P C ++D+ + G ++ A ++++ ++ S +T S +I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 389 LCKKGKVLEARNVF-EEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
L K G + A +F E + G +L+TYN ++ + A +L+ DM G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
TY++++ G +E + EM + +P++ Y
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 115/246 (46%), Gaps = 2/246 (0%)
Query: 242 SYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
+YTT++G ++L E++ G P+ TY L+ + R L A+ V + M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
+E G +P+ VTY +I+ + K A+++ + M G P + +++ L + G++
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 362 ERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTL 419
A +++ ++ + C + + ++ K A ++ + + G +TY+ +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
+ L G L EA ++ +M +K P+ Y LL++ + K GN ++ + + M G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 480 LPNKST 485
PN T
Sbjct: 606 RPNVPT 611
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 133/270 (49%), Gaps = 3/270 (1%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G PN V+ N L+ + + N + A+ V ++M G P+ V+Y T++ +A G +D
Sbjct: 392 RDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLD 451
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
AM + + G +PD TY+V+++ + G L AA K+ +M + G PN VTY +M+
Sbjct: 452 IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMM 511
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICG 376
+ + K + A+ L DM G P V++VL G +E A V+ + +K
Sbjct: 512 DLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI 571
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARL 435
D V L+ K G V +A ++ G ++ T N+L++ ++ EA L
Sbjct: 572 PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYEL 631
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
+M+ G P+ TY LL++ C G +K
Sbjct: 632 LQNMLALGLRPSLQTYTLLLS-CCTDGRSK 660
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 2/278 (0%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
++ L + + ++LDEM+ G PN V+Y ++ Y ++ AM V ++ + G
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
PD TY L+D + G L A+ + M+ G+ P+ TY V+I K A
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAH 489
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-DNTVASTLIHWL 389
L +MV +G P+ ++D+ + N + A +++R ++ D S ++ L
Sbjct: 490 KLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 549
Query: 390 CKKGKVLEARNVFEEFEGGS-VASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
G + EA VF E + + + Y L+ + G + +A + + M+ G PN
Sbjct: 550 GHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNV 609
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
T N L++ F +V E +L+ M G P+ TY
Sbjct: 610 PTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTY 647
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G+ D TYT +V R + A K++D+M +G QPN VTY +I +Y + EA
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHW 388
+N+ M G P C ++D+ + G ++ A ++++ ++ S +T S +I+
Sbjct: 419 MNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINC 478
Query: 389 LCKKGKVLEARNVF-EEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
L K G + A +F E + G +L+TYN ++ + A +L+ DM G P+
Sbjct: 479 LGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPD 538
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
TY++++ G +E + EM + +P++ Y
Sbjct: 539 KVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 115/246 (46%), Gaps = 2/246 (0%)
Query: 242 SYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
+YTT++G ++L E++ G P+ TY L+ + R L A+ V + M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
+E G +P+ VTY +I+ + K A+++ + M G P + +++ L + G++
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHL 485
Query: 362 ERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTL 419
A +++ ++ + C + + ++ K A ++ + + G +TY+ +
Sbjct: 486 PAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIV 545
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
+ L G L EA ++ +M +K P+ Y LL++ + K GN ++ + + M G
Sbjct: 546 MEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Query: 480 LPNKST 485
PN T
Sbjct: 606 RPNVPT 611
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 151/326 (46%), Gaps = 10/326 (3%)
Query: 162 RLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEV 221
+LG+ +R + A F+ R R +V++ N +L A C+ +
Sbjct: 209 KLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER-----DVIAWNSVLLAYCQNGKH 263
Query: 222 EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVL 281
E AV ++ EM G+ P +V++ ++GGY G D AM ++ ++ G D T+T +
Sbjct: 264 EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAM 323
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
+ G G A+ + M GV PN VT + A K + + V+ G
Sbjct: 324 ISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGF 383
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNV 401
+ + +VD+ + G +E A +V+ ++ D +++I C+ G +A +
Sbjct: 384 IDDVLVGNSLVDMYSKCGKLEDARKVFDSVKN---KDVYTWNSMITGYCQAGYCGKAYEL 440
Query: 402 FEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP-NAFTYNLLINGFC 459
F + ++ +++T+NT+I+G + G+ EA L+ M + G+ N T+NL+I G+
Sbjct: 441 FTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYI 500
Query: 460 KVGNAKEGIRILEEMCENGCLPNKST 485
+ G E + + +M + +PN T
Sbjct: 501 QNGKKDEALELFRKMQFSRFMPNSVT 526
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 152/371 (40%), Gaps = 50/371 (13%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I GY GK D+A+ ++E+ GI V + N A +F R F
Sbjct: 289 IGGYNQLGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMF---RKMF 344
Query: 200 --GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
GV PN V+ + A + + V + MG + +V+ +++ Y+ G ++
Sbjct: 345 LAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLE 404
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A +V V +K D T+ ++ G+C+ G A ++ M++ ++PN +T+ MI
Sbjct: 405 DARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI 460
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVP-SSGLCCKVVDVLCEEGNVERACEVWR------- 369
Y K GEA++L + M + G V ++ ++ + G + A E++R
Sbjct: 461 SGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRF 520
Query: 370 -----------------------------VLRKICGSDNTVASTLIHWLCKKGKVLEARN 400
VLR+ + + V + L K G + +R
Sbjct: 521 MPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRT 580
Query: 401 VFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCK 460
+F G ++T+N+LI G G A L++ M +G PN T + +I
Sbjct: 581 IFL---GMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGL 637
Query: 461 VGNAKEGIRIL 471
+GN EG ++
Sbjct: 638 MGNVDEGKKVF 648
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/338 (20%), Positives = 141/338 (41%), Gaps = 62/338 (18%)
Query: 186 RLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTT 245
++ HSV + G+S + N +L K E++ A + M +V+++ +
Sbjct: 201 KVIHSVV----IKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRE----RDVIAWNS 252
Query: 246 VMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
V+ Y G + A+ ++ E+ +G +P T+ +L+ G+ + G+ AA+ +M ME G
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERAC 365
+ + T+ MI +A+++ M G VP++ V AC
Sbjct: 313 ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVS----------AC 362
Query: 366 EVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCE 425
+V+ + GS+ +H + K G + +L N+L+ +
Sbjct: 363 SCLKVINQ--GSE-------VHSIAVKM--------------GFIDDVLVGNSLVDMYSK 399
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
G+L +A +++D + K + +T+N +I G+C+ G + + M + PN T
Sbjct: 400 CGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIIT 455
Query: 486 YXXXXXXXXXXXXMNQEINKVVALAMSTGVDGELWDLL 523
+ N +++ + G +GE DL
Sbjct: 456 W-----------------NTMISGYIKNGDEGEAMDLF 476
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 126/289 (43%), Gaps = 18/289 (6%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
PN++ + LC+ + A + LD + G +Y ++ +D
Sbjct: 45 PNIIP-DEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLL-----ESCIDSGSIH 98
Query: 263 LGEVLDKGWA----PDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
LG +L + PD T L+ + + G + A KV D M E N T+ MI
Sbjct: 99 LGRILHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIG 154
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
AY + + E L M++ G +P L K++ G+VE + V+ K+ S
Sbjct: 155 AYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSS 214
Query: 379 NT-VASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
V+++++ K G++ A F V + +N+++ C+ G+ EA L
Sbjct: 215 CLRVSNSILAVYAKCGELDFATKFFRRMRERDV---IAWNSVLLAYCQNGKHEEAVELVK 271
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M ++G +P T+N+LI G+ ++G + ++++M G + T+
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTW 320
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 126/274 (45%), Gaps = 9/274 (3%)
Query: 167 PSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVR 226
PSVR ++++ + A +++ + V P VV+ L++ C++ V++A+
Sbjct: 248 PSVRIFNILLNGWFRSRKLKQAEKLWEEMKA-MNVKPTVVTYGTLIEGYCRMRRVQIAME 306
Query: 227 VLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFC 286
VL+EM + N + + ++ G G + A+ ++ P TY LV FC
Sbjct: 307 VLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFC 366
Query: 287 RQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSG 346
+ G L A K++ M GV P TY + + K K E +NL ++ GH P
Sbjct: 367 KAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRL 426
Query: 347 LCCKVVDVLCEEGNVERACEVWRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEEF 405
++ +LCE+G + A +V + ++ + D + LIH LC+ + EA FEEF
Sbjct: 427 TYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEA---FEEF 483
Query: 406 EG----GSVASLLTYNTLIAGLCERGELCEAARL 435
+ G + +T+ + GL +G A RL
Sbjct: 484 DNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/384 (22%), Positives = 161/384 (41%), Gaps = 58/384 (15%)
Query: 149 PDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTR--FGVSPNVV 206
P S+L + L GI PSV + L HSVFK + + F +SP++
Sbjct: 84 PGSSLESAL---DETGIEPSVELVHALFDRLSSSPM--LLHSVFKWAEMKPGFTLSPSLF 138
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVS---YTTVMGGYAWRGDMDGAMRV- 262
++ +LCK E E+A ++ + + N+VS + ++ YA G + A+R
Sbjct: 139 DS--VVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAF 196
Query: 263 -----------------------------------------LGEVLDKGWAPDATTYTVL 281
+G +D W P + +L
Sbjct: 197 EFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNIL 256
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
++G+ R +L A K+ ++M+ V+P VTYG +IE YC+ ++ A+ +LE+M
Sbjct: 257 LNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEM 316
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAS--TLIHWLCKKGKVLEAR 399
+ + ++D L E G + A + +C S T+ + +L+ CK G + A
Sbjct: 317 EINFMVFNPIIDGLGEAGRLSEALGMMERFF-VCESGPTIVTYNSLVKNFCKAGDLPGAS 375
Query: 400 NVFE-EFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
+ + G + TYN + + E L+ ++E G +P+ TY+L++
Sbjct: 376 KILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKML 435
Query: 459 CKVGNAKEGIRILEEMCENGCLPN 482
C+ G +++ +EM G P+
Sbjct: 436 CEDGKLSLAMQVNKEMKNRGIDPD 459
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 130/282 (46%), Gaps = 5/282 (1%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGM---GLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+LL ALCK V A L+ + G VP+V + ++ G+ + A ++ E+
Sbjct: 217 VLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEM 276
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
P TY L++G+CR R+ A++V+++M+ ++ N + + +I+ + +
Sbjct: 277 KAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRL 336
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSDNTVASTL 385
EA+ ++E P+ +V C+ G++ A ++ +++ + T +
Sbjct: 337 SEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHF 396
Query: 386 IHWLCKKGKVLEARNV-FEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
+ K K E N+ F+ E G LTY+ ++ LCE G+L A ++ +M +G
Sbjct: 397 FKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGI 456
Query: 445 APNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P+ T +LI+ C++ +E + G +P T+
Sbjct: 457 DPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYITF 498
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 130/288 (45%), Gaps = 36/288 (12%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F S+T F P S N +L +L V + ++ V ++ML G P+V++Y VM
Sbjct: 210 FIKSKT-FNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANF 268
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
G D R+L E++ G++PD TY +L+ + +AA+ +++ M E GV+P +
Sbjct: 269 RLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVI 328
Query: 312 TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
+ +I+ + K +++ V+ G P DV+C
Sbjct: 329 HFTTLIDGLSRAGKLEACKYFMDETVKVGCTP---------DVVC--------------- 364
Query: 372 RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELC 430
+ +I G++ +A +F+E E G + ++ TYN++I G C G+
Sbjct: 365 ----------YTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFK 414
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
EA L +M +G PN Y+ L+N G E ++++M E G
Sbjct: 415 EACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 33/225 (14%)
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
V ++L+ G+ PD TY +++ R G+ +++D+M ++G P+ TY +++
Sbjct: 244 VYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLA 303
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTV 381
KP A+NLL M G P ++D L G +E AC+ + D TV
Sbjct: 304 TGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLE-ACKYFM--------DETV 354
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
KV G ++ Y +I G GEL +A ++ +M E
Sbjct: 355 ------------KV------------GCTPDVVCYTVMITGYISGGELEKAEEMFKEMTE 390
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
KG+ PN FTYN +I GFC G KE +L+EM GC PN Y
Sbjct: 391 KGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVY 435
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 130/274 (47%), Gaps = 4/274 (1%)
Query: 144 GLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSP 203
G AG + F++ ++ RP + K+++L V++ G +P
Sbjct: 198 GEAGLARDVVEQFIKSKT-FNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLED-GFTP 255
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
+V++ NI++ A ++ + + R+LDEM+ G P++ +Y ++ A A+ +L
Sbjct: 256 DVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLL 315
Query: 264 GEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKW 323
+ + G P +T L+DG R G+L A MD+ + G P+ V Y VMI Y
Sbjct: 316 NHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISG 375
Query: 324 KKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICGSDNTVA 382
+ +A + ++M KG +P+ ++ C G + AC + + + + C + V
Sbjct: 376 GELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVY 435
Query: 383 STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLT 415
STL++ L GKVLEA V ++ E G L++
Sbjct: 436 STLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 469
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 128/261 (49%), Gaps = 2/261 (0%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G PN V+ N L+ + + N ++ A+ V ++M G P+ V+Y T++ +A G +D
Sbjct: 387 RDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLD 446
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
AM + + + G +PD TY+V+++ + G L AA ++ +M G PN VT+ +MI
Sbjct: 447 IAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 506
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICG 376
+ K + A+ L DM G P V++VL G +E A V+ + RK
Sbjct: 507 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV 566
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARL 435
D V L+ K G V +A ++ + G ++ T N+L++ + EA L
Sbjct: 567 PDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNL 626
Query: 436 WDDMVEKGRAPNAFTYNLLIN 456
M+ G P+ TY LL++
Sbjct: 627 LQSMLALGLHPSLQTYTLLLS 647
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 2/263 (0%)
Query: 226 RVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGF 285
++LDEM+ G PN V+Y ++ Y + AM V ++ + G PD TY L+D
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 286 CRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSS 345
+ G L A+ + M+E G+ P+ TY V+I K A L +MV +G P+
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNL 499
Query: 346 GLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEE 404
++ + + N E A +++R ++ D S ++ L G + EA VF E
Sbjct: 500 VTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAE 559
Query: 405 FEGGS-VASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGN 463
+ + V Y L+ + G + +A + + M++ G PN T N L++ F +V
Sbjct: 560 MQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHR 619
Query: 464 AKEGIRILEEMCENGCLPNKSTY 486
E +L+ M G P+ TY
Sbjct: 620 MSEAYNLLQSMLALGLHPSLQTY 642
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 2/219 (0%)
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G+ D TYT +V R + K++D+M +G +PN VTY +I +Y + EA
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHW 388
+N+ M G P C ++D+ + G ++ A ++++ +++ S +T S +I+
Sbjct: 414 MNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINC 473
Query: 389 LCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
L K G + A +F E G G +L+T+N +IA + A +L+ DM G P+
Sbjct: 474 LGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPD 533
Query: 448 AFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
TY++++ G +E + EM +P++ Y
Sbjct: 534 KVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVY 572
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 113/246 (45%), Gaps = 2/246 (0%)
Query: 242 SYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
+YTT++G ++L E++ G P+ TY L+ + R L A+ V + M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
+E G +P+ VTY +I+ + K A+++ + M G P + +++ L + G++
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHL 480
Query: 362 ERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTL 419
A ++ ++ + C + + +I K A ++ + + G +TY+ +
Sbjct: 481 PAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIV 540
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
+ L G L EA ++ +M K P+ Y LL++ + K GN + + + M + G
Sbjct: 541 MEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGL 600
Query: 480 LPNKST 485
PN T
Sbjct: 601 RPNVPT 606
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 105/246 (42%), Gaps = 23/246 (9%)
Query: 99 IFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLR 158
+F ++ A C P+ + + + H+ FL D A+ + R
Sbjct: 416 VFNQMQEAGCEPDRVTYCTLIDIHAKAGFL---------------------DIAMDMYQR 454
Query: 159 IESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKV 218
++ G+ P + AH +F + G +PN+V+ NI++ K
Sbjct: 455 MQ-EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQ-GCTPNLVTFNIMIALHAKA 512
Query: 219 NEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTY 278
E A+++ +M G P+ V+Y+ VM G ++ A V E+ K W PD Y
Sbjct: 513 RNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVY 572
Query: 279 TVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVR 338
+LVD + + G + A + M + G++PN T ++ + + + EA NLL+ M+
Sbjct: 573 GLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLA 632
Query: 339 KGHVPS 344
G PS
Sbjct: 633 LGLHPS 638
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 209/465 (44%), Gaps = 47/465 (10%)
Query: 56 RLHPKLLASLISRQHDPHLSLQIFRH-AQTHHRASSHHPLPYRAIFLKLSRARCFPEMES 114
R KL+ LI R PH + +F+ A+T HR S + Y + ++ + + + S
Sbjct: 46 RSRTKLMNVLIERGR-PHEAQTVFKTLAETGHRPS---LISYTTLLAAMTVQKQYGSISS 101
Query: 115 LLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXX 174
++S + + + LD + ++ A + +G + A++ L+++ LG+ P+
Sbjct: 102 IVSEVEQSGTK--LDSIFFNAVINA---FSESGNMEDAVQALLKMK-ELGLNPTTSTYNT 155
Query: 175 XXXXX-VQNKRHRLAHSV-FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEML 232
+ K R + + V PN+ + N+L++A CK +VE A V+ +M
Sbjct: 156 LIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKME 215
Query: 233 GMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK-----GWAPDATTYTVLVDGFCR 287
G+ P+ V+Y T+ Y +G+ +R EV++K P+ T ++V G+CR
Sbjct: 216 ECGVRPDTVTYNTIATCYVQKGE---TVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCR 272
Query: 288 QGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK-WKKPG--------------EAVNL 332
+GR+ ++ + M+E V+ N V + +I + + + G E V L
Sbjct: 273 EGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVEL 332
Query: 333 LEDMVRKGHVPSSGLCCKV-VDVLC---------EEGNVERACEVWRVLRKI-CGSDNTV 381
+ + K V + C V DV+ G +E+A +V++ + K D
Sbjct: 333 VGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 392
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
S L + + +A + E S +++ + T+I+G C G + +A R+++ M +
Sbjct: 393 YSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK 452
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G +PN T+ L+ G+ +V + +L+ M G P ST+
Sbjct: 453 FGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTF 497
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A VFK + GV P+ + +IL K + E + A +L+ ++ + PNVV +TTV+
Sbjct: 374 AAQVFKE-MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVI 431
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
G+ G MD AMRV ++ G +P+ T+ L+ G+ + A +V+ M GV+
Sbjct: 432 SGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVK 491
Query: 308 PNEVTYGVMIEAY 320
P T+ ++ EA+
Sbjct: 492 PENSTFLLLAEAW 504
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 142/299 (47%), Gaps = 12/299 (4%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG-LVPNVVSYTTVMGGYAWRGDMDG 258
G++PN+++ N++ +A V + E+A+ + L P++ ++ ++ G +++
Sbjct: 160 GIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEK 219
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN--GVQPNEVTYGVM 316
AM + ++ KG+ D Y+ L+ G + +K+ +++E G + V YG +
Sbjct: 220 AMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQL 279
Query: 317 IEAYCKWKKPGEAVNLLEDMV-RKGHVPSSGLCCK-VVDVLCEEGNVERACEVWRVLRKI 374
++ Y + EA+ E+ V V S + V++ L E G + A +++ ++K
Sbjct: 280 MKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKE 339
Query: 375 CGSDNTVA------STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERG 427
+A + +++ C GK EA VF + + L++N L+ LC+
Sbjct: 340 HNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNE 399
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L EA +L+ +M EK P+ +TY LL++ K G EG + M E+ PN + Y
Sbjct: 400 LLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVY 458
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 145/327 (44%), Gaps = 13/327 (3%)
Query: 161 SRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNE 220
++ GI P++ + ++ +A +K ++P++ + IL+K L +
Sbjct: 157 NQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDN 216
Query: 221 VEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK--GWAPDATTY 278
+E A+ + ++M G V + V Y+ +M G D DG +++ E+ +K G+ D Y
Sbjct: 217 LEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVY 276
Query: 279 TVLVDGFCRQGRLVAAIKVMDDM--EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDM 336
L+ G+ + A++ ++ E + V+ + + Y ++EA + K EA+ L D
Sbjct: 277 GQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLF-DA 335
Query: 337 VRKGHVPSSGLCCKV------VDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHWL 389
V+K H P L + V+ C G E A EV+R + C D + L++ L
Sbjct: 336 VKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQL 395
Query: 390 CKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
C + EA ++ E E +V TY L+ + G++ E A + MVE PN
Sbjct: 396 CDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNL 455
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMC 475
YN L + K G + + M
Sbjct: 456 AVYNRLQDQLIKAGKLDDAKSFFDMMV 482
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 105/221 (47%), Gaps = 9/221 (4%)
Query: 189 HSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLG-----MGLVPNVVSY 243
+V +NS+ R + ++ N +L+AL + + + A+++ D + L N+ ++
Sbjct: 298 EAVGENSKVRM----SAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTF 353
Query: 244 TTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEE 303
++ GY G + AM V ++ D +PD ++ L++ C L A K+ +MEE
Sbjct: 354 NVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEE 413
Query: 304 NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVER 363
V+P+E TYG++++ K K E + MV P+ + ++ D L + G ++
Sbjct: 414 KNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDD 473
Query: 364 ACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEE 404
A + ++ D+ ++ L + G++ E + +E
Sbjct: 474 AKSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDE 514
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 116/261 (44%), Gaps = 12/261 (4%)
Query: 238 PNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKV 297
P + + TV+ + +++ G + G AP+ TY ++ + + A++
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEH 187
Query: 298 MDDMEENG-VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC 356
+N + P+ T+ ++++ +A+ + EDM KG V + ++
Sbjct: 188 YKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCV 247
Query: 357 EEGNVERACEVWRVLRKICG---SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-- 411
+ + + ++++ L++ G D V L+ K EA +EE G +
Sbjct: 248 KNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVR 307
Query: 412 -SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP-----NAFTYNLLINGFCKVGNAK 465
S + YN ++ L E G+ EA +L+D + ++ P N T+N+++NG+C G +
Sbjct: 308 MSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFE 367
Query: 466 EGIRILEEMCENGCLPNKSTY 486
E + + +M + C P+ ++
Sbjct: 368 EAMEVFRQMGDFKCSPDTLSF 388
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 82/189 (43%), Gaps = 4/189 (2%)
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
N+ + N+++ C + E A+ V +M P+ +S+ +M + A ++
Sbjct: 349 NLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLY 408
Query: 264 GEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKW 323
GE+ +K PD TY +L+D ++G++ M E+ ++PN Y + + K
Sbjct: 409 GEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKA 468
Query: 324 KKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAS 383
K +A + + MV K + ++ L E G R E+ +++ ++ D S
Sbjct: 469 GKLDDAKSFFDMMVSKLKMDDEAYKF-IMRALSEAG---RLDEMLKIVDEMLDDDTVRVS 524
Query: 384 TLIHWLCKK 392
+ K+
Sbjct: 525 EELQEFVKE 533
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 111/220 (50%), Gaps = 4/220 (1%)
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
V ++L+ G++PD TY +L+ R G++ ++ D+M +G P+ TY +++
Sbjct: 241 VYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILG 300
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW--RVLRKICGSDN 379
K KP A+ L M G PS ++D L GN+E AC+ + +++ C D
Sbjct: 301 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLE-ACKYFLDEMVKAGCRPDV 359
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+ +I G++ +A+ +F E G + ++ TYN++I GLC GE EA L +
Sbjct: 360 VCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKE 419
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
M +G PN Y+ L++ K G E +++ EM + G
Sbjct: 420 MESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 74/148 (50%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
N G+ P+V+ L+ L + +E LDEM+ G P+VV YT ++ GY
Sbjct: 313 NHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVS 372
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
G++D A + E+ KG P+ TY ++ G C G A ++ +ME G PN V Y
Sbjct: 373 GELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVY 432
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
++ K K EA ++ +MV+KGH
Sbjct: 433 STLVSYLRKAGKLSEARKVIREMVKKGH 460
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 127/254 (50%), Gaps = 3/254 (1%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F S+T F P S N +L +L V + ++ V +ML G P+V++Y ++
Sbjct: 207 FMKSKT-FNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNY 265
Query: 252 WRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV 311
G MD R+ E+ G++PD+ TY +L+ + + +AA+ ++ M+E G+ P+ +
Sbjct: 266 RLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVL 325
Query: 312 TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
Y +I+ + L++MV+ G P ++ G +++A E++R +
Sbjct: 326 HYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREM 385
Query: 372 RKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGEL 429
N +++I LC G+ EA + +E E G + + Y+TL++ L + G+L
Sbjct: 386 TVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKL 445
Query: 430 CEAARLWDDMVEKG 443
EA ++ +MV+KG
Sbjct: 446 SEARKVIREMVKKG 459
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 150/309 (48%), Gaps = 44/309 (14%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
F V + V+ N++++ ++ +A ++ EM +GL P+V++YT+++ GY G +D
Sbjct: 159 FNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDD 218
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME-ENG---VQPNEVTYG 314
A R+ E+ ++ TY+ +++G C+ G + A++++ +ME E+G + PN VTY
Sbjct: 219 AWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYT 278
Query: 315 VMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCC-----------------KVVDVLCE 357
++I+A+C+ ++ EA+ +L+ M +G +P+ C K++D L +
Sbjct: 279 LVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVK 338
Query: 358 EGNV-------------------ERACEVWRV-LRKICGSDNTVASTLIHWLCKKGKVLE 397
G V E A +++R+ L + D S + LC + L+
Sbjct: 339 LGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLD 398
Query: 398 ARNVFEEFEGGSVASLL---TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLL 454
+++E E V S + + L+ GLC++G EAA+L M++K +
Sbjct: 399 CFLLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKI 458
Query: 455 INGFCKVGN 463
I K G+
Sbjct: 459 IEALKKTGD 467
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLW 436
D +++I+ C GK+ +A + +E V + +TY+ ++ G+C+ G++ A L
Sbjct: 199 DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELL 258
Query: 437 DDMVEKGR----APNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+M ++ +PNA TY L+I FC+ +E + +L+ M GC+PN+ T
Sbjct: 259 AEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVT 311
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 13/118 (11%)
Query: 369 RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGE 428
R++ +C N L W+ +K F EF A + YN +I ++G+
Sbjct: 134 RIVLTLCNQANLADEAL--WVLRK---------FPEF--NVCADTVAYNLVIRLFADKGD 180
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L A L +M G P+ TY +ING+C G + R+ +EM ++ C+ N TY
Sbjct: 181 LNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTY 238
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 137/287 (47%), Gaps = 5/287 (1%)
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGG-YAWRGDMDGAMRV 262
NV CN +L L K +++ +++ D+M GL P+VV+Y T++ G + A+ +
Sbjct: 165 NVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPKAIEL 224
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+GE+ G D+ Y ++ GR A + M+ G PN Y ++ +Y
Sbjct: 225 IGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYS- 283
Query: 323 WKKP-GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTV 381
WK +A L+ +M G VP+ + ++ V + G +R+ E+ L ++N +
Sbjct: 284 WKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEM 343
Query: 382 AS-TLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNT-LIAGLCERGELCEAARLWDDM 439
L+ L K GK+ EAR++F++ +G V S N+ +I+ LC EA L D
Sbjct: 344 PYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDS 403
Query: 440 VEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ N ++ +C+ G + +R++++M E P+ +T+
Sbjct: 404 ETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTF 450
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 140/294 (47%), Gaps = 14/294 (4%)
Query: 198 RFGVSPNVVSCNILLKALCKV-NEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
R G+ P+VV+ N LL KV N A+ ++ E+ G+ + V Y TV+ A G
Sbjct: 194 RDGLKPDVVTYNTLLAGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRS 253
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
+ A + ++ +G +P+ Y+ L++ + +G A ++M +M+ G+ PN+V +
Sbjct: 254 EEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTL 313
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KIC 375
++ Y K + LL ++ G+ + C ++D L + G +E A ++ ++ K
Sbjct: 314 LKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGV 373
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEFEGG-SVASLLTYNTLIAGLCERGELCEAAR 434
SD S +I LC+ + EA+ + + E L+ NT++ C GE+ R
Sbjct: 374 RSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMR 433
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCK-----------VGNAKEGIRILEEMCEN 477
+ M E+ +P+ T+++LI F K + +G R+ EE+C +
Sbjct: 434 MMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSS 487
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 83/222 (37%), Gaps = 38/222 (17%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G+ PN V LLK K + + +L E+ G N + Y +M G + G ++
Sbjct: 301 IGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEE 360
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDG---------------------------------- 284
A + ++ KG D ++++
Sbjct: 361 ARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLC 420
Query: 285 -FCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVP 343
+CR G + + +++M M+E V P+ T+ ++I+ + K K A DM KGH
Sbjct: 421 AYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRL 480
Query: 344 SSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTL 385
LC ++ L G + E + V + S T+ L
Sbjct: 481 EEELCSSLIYHL---GKIRAQAEAFSVYNMLRYSKRTICKEL 519
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 124/298 (41%), Gaps = 39/298 (13%)
Query: 193 KNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
K R R P + + N+LL ALCK V+ +L M + P+ ++ + G+
Sbjct: 222 KRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCR 280
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG---VQPN 309
D AM++L E+++ G P+ TY +D FC+ G + A + D M G P
Sbjct: 281 VRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPT 340
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
T+ +MI A K K E L+ M+ G +P
Sbjct: 341 AKTFALMIVALAKNDKAEECFELIGRMISTGCLP-------------------------- 374
Query: 370 VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGE 428
D + +I +C KV EA +E G ++TYN + LCE +
Sbjct: 375 --------DVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRK 426
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
EA +L+ MVE AP+ TYN+LI+ F ++ + EM + C+ + TY
Sbjct: 427 TDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETY 484
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 121/319 (37%), Gaps = 75/319 (23%)
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
R R V P+ + N+L C+V + + A+++L+EM+ G P +Y + + G
Sbjct: 259 RMRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGM 318
Query: 256 MDGA--------------------------------------MRVLGEVLDKGWAPDATT 277
+D A ++G ++ G PD +T
Sbjct: 319 VDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVST 378
Query: 278 YTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMV 337
Y +++G C ++ A K +D+M G P+ VTY + C+ +K EA+ L MV
Sbjct: 379 YKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMV 438
Query: 338 RKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLE 397
PS ++ + E + + A W + K
Sbjct: 439 ESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDK------------------------ 474
Query: 398 ARNVFEEFEGGSVASLLTYNTLIAGL--CERGELCEAARLWDDMVEKGRAPNAFTYNLLI 455
R+ ++ E TY +I GL C R + EA L +++V KG ++ +
Sbjct: 475 -RDCVQDVE--------TYCAMINGLFDCHRAK--EACFLLEEVVNKGLKLPYRVFDSFL 523
Query: 456 NGFCKVGNAKEGIRILEEM 474
+VGN K ++ E M
Sbjct: 524 MRLSEVGNLKAIHKVSEHM 542
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 158/345 (45%), Gaps = 12/345 (3%)
Query: 60 KLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTL 119
K L SL++ + +P ++ F+ A R ++ + R + +L A+ +E +L
Sbjct: 42 KSLTSLVNGERNPKRIVEKFKKACESERFRTNIAVYDRTV-RRLVAAKRLHYVEEIL--- 97
Query: 120 PRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXX 179
+++ D E I YG AG ++A + F + +R + SV
Sbjct: 98 --EEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNR-DCKRSVLSFNALLSAY 154
Query: 180 VQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPN 239
+K+ + +F + + P++VS N L+KALC+ + + AV +LDE+ GL P+
Sbjct: 155 RLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPD 214
Query: 240 VVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMD 299
+V++ T++ +G + + ++++K A D TY + G + + + +
Sbjct: 215 IVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFG 274
Query: 300 DMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEG 359
+++ +G++P+ ++ MI K EA +++V+ G+ P ++ +C+ G
Sbjct: 275 ELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAG 334
Query: 360 NVERACEVWRVL---RKICGSDNTVASTLIHWLCKKGKVLEARNV 401
+ E A E+++ R + G T L+ L K K EA +
Sbjct: 335 DFESAIELFKETFSKRYLVG--QTTLQQLVDELVKGSKREEAEEI 377
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 99/223 (44%), Gaps = 15/223 (6%)
Query: 272 APDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVN 331
+P + T LV+G R+V K E + N Y + K+
Sbjct: 38 SPPQKSLTSLVNGERNPKRIVEKFK--KACESERFRTNIAVYDRTVRRLVAAKRLHYVEE 95
Query: 332 LLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-----RVLRKICGSDNTVASTLI 386
+LE+ + + G +++ + + G E A +V+ R ++ S N + S
Sbjct: 96 ILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSA-- 153
Query: 387 HWLCKKGKVLEARNVFEEFEGG-SVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
+ L KK V+E +F E G S+ +++YNTLI LCE+ L EA L D++ KG
Sbjct: 154 YRLSKKFDVVE--ELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGL 211
Query: 445 APNAFTYN-LLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P+ T+N LL++ + K G + G I +M E + TY
Sbjct: 212 KPDIVTFNTLLLSSYLK-GQFELGEEIWAKMVEKNVAIDIRTY 253
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 383 STLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+TLI LC+K + EA + +E E G ++T+NTL+ +G+ +W MVE
Sbjct: 184 NTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVE 243
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
K A + TYN + G +KE + + E+ +G P+
Sbjct: 244 KNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPD 284
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 175/442 (39%), Gaps = 67/442 (15%)
Query: 69 QHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPR------- 121
+++PHLSL+ F + + SH + LSR+R ++ R
Sbjct: 82 RNNPHLSLRFFLFTR-RYSLCSHDTHSCSTLIHILSRSRLKSHASEIIRLALRLAATDED 140
Query: 122 --------HSPQQFLDHCGEDPLV--TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRX 171
S + + CG P V I+ + + D A+ ++ SR GI +
Sbjct: 141 EDRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSR-GINAQI-- 197
Query: 172 XXXXXXXXVQNKRHRLAHSVFKNSRTRFG---------------VSPNVVSCNILLKALC 216
+ R R A + +K R FG + PN + N ++ +
Sbjct: 198 -STCNALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFY 256
Query: 217 KVNEVEVAVRVLDEMLG-MGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDA 275
+ E E+ R+ EM +G PNV SY +M Y RG M A +V E+ +G D
Sbjct: 257 REGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDI 316
Query: 276 TTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLED 335
Y ++ G C +V A ++ DM G++ +TY ++ YCK + + +
Sbjct: 317 VAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYRE 376
Query: 336 MVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKV 395
M RKG +V+ LC++ + +R E A+ ++ ++
Sbjct: 377 MKRKGFEADGLTIEALVEGLCDDRDGQRVVE---------------AADIVKDAVREAMF 421
Query: 396 LEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLI 455
+RN +E L+ LCE G++ A + +MV KG P+ TY I
Sbjct: 422 YPSRNCYE--------------LLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFI 467
Query: 456 NGFCKVGNAKEGIRILEEMCEN 477
+G+ VG+ + + EM E+
Sbjct: 468 DGYGIVGDEETSALLAIEMAES 489
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Query: 358 EGNVERACEVWRVLRKICGSDNTVAS--TLIHWLCKKGKVLEARNVFEEFE-GGSVASLL 414
EG E +WR + + G V S L+ C +G + EA V+EE + G V ++
Sbjct: 258 EGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIV 317
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
YNT+I GLC E+ +A L+ DM KG TY L+NG+CK G+ G+ + EM
Sbjct: 318 AYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREM 377
Query: 475 CENG 478
G
Sbjct: 378 KRKG 381
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 117/446 (26%), Positives = 182/446 (40%), Gaps = 68/446 (15%)
Query: 58 HPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLS 117
P +L L DP L FR + H Y IF + R E+ LL
Sbjct: 57 EPVVLQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLG 116
Query: 118 TLPRHSPQQFLDHCGEDPLVTA-IRGYGLAGKPDSALRTFLRIESRLG--IRPSVRXXXX 174
++ LD L+ + IR +GK +SAL +E LG + PSV
Sbjct: 117 SMKEDGVN--LDQTMAKILLDSLIR----SGKFESALGVLDYME-ELGDCLNPSV--YDS 167
Query: 175 XXXXXVQNKRHRLAHSV-FK-------NSRTRFG----VS--PNVVSCNILLKALCKVNE 220
V+ RLA S+ FK +S G VS P V+ N LL L + +
Sbjct: 168 VLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADM 227
Query: 221 VEVAVRVLDEMLGMGLVP-NVVSYTTVMGGYAWRGDMDGAMRVLGE------VLDKGWAP 273
RV +++ GM + SY + G+ GD+D A+ + E V + P
Sbjct: 228 RSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGP 287
Query: 274 DATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLL 333
D TY L+ C G+ A+ V D+++ +G +P+ TY ++I+ CK + +A+ +
Sbjct: 288 DICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIY 347
Query: 334 EDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKG 393
+M G VP D V + L+ K
Sbjct: 348 GEMQYNGFVP----------------------------------DTIVYNCLLDGTLKAR 373
Query: 394 KVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYN 452
KV EA +FE+ + G AS TYN LI GL G L+ D+ +KG+ +A T++
Sbjct: 374 KVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFS 433
Query: 453 LLINGFCKVGNAKEGIRILEEMCENG 478
++ C+ G + ++++EEM G
Sbjct: 434 IVGLQLCREGKLEGAVKLVEEMETRG 459
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 143/312 (45%), Gaps = 26/312 (8%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV+ + ILL +L + + E A+ VLD M +G N Y +V+ + ++ A
Sbjct: 122 GVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLA 181
Query: 260 MRVLGEVLD--KGWAPDATTYTVLVD---GFCRQGRLVAAIKVMDDMEE----------- 303
+ +L ++L+ + D T ++V G L+ ++ D E
Sbjct: 182 LSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGM 241
Query: 304 NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSG----LCC--KVVDVLCE 357
+ + +Y + I + W A++L ++M + V S +C ++ VLC
Sbjct: 242 KRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCL 301
Query: 358 EGNVERACEVWRVLRKICGS--DNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLL 414
G + A VW L K+ G DN+ LI CK ++ +A ++ E + G V +
Sbjct: 302 FGKAKDALIVWDEL-KVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTI 360
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
YN L+ G + ++ EA +L++ MV++G + +TYN+LI+G + G A+ G + ++
Sbjct: 361 VYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL 420
Query: 475 CENGCLPNKSTY 486
+ G + T+
Sbjct: 421 KKKGQFVDAITF 432
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 24/249 (9%)
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
+LG + + G D T +L+D R G+ +A+ V+D MEE G N Y ++ A
Sbjct: 114 LLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALV 173
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV------------ERACEVWR 369
K + A+++L ++ S +V+ V G V + E R
Sbjct: 174 KKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKR 233
Query: 370 VLRKICGS-----DNTVASTLIHWLCKKGKVLEARNVFEEFE------GGSVA-SLLTYN 417
V K+ G D + IH G + A ++F+E + G S + TYN
Sbjct: 234 VFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYN 293
Query: 418 TLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCEN 477
+LI LC G+ +A +WD++ G P+ TY +LI G CK + +RI EM N
Sbjct: 294 SLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYN 353
Query: 478 GCLPNKSTY 486
G +P+ Y
Sbjct: 354 GFVPDTIVY 362
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/386 (20%), Positives = 152/386 (39%), Gaps = 66/386 (17%)
Query: 164 GIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEV 223
G+R S +N R ++F + + + G + ++ +I+ LC+ ++E
Sbjct: 389 GVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKK-GQFVDAITFSIVGLQLCREGKLEG 447
Query: 224 AVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVD 283
AV++++EM G ++V+ ++++ G+ +G D +++ + + P+ + V+
Sbjct: 448 AVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVE 507
Query: 284 G---------------FCRQGRLVAAIKVMDDMEENGVQPNEVT-----------YGVMI 317
F +G + I M E++G EV+ Y +
Sbjct: 508 ASLKRPQSKDKDYTPMFPSKGSFLD-IMSMVGSEDDGASAEEVSPMEDDPWSSSPYMDQL 566
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
KP + + + K + + + +G++ AC+++ + + +
Sbjct: 567 AHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVT 626
Query: 378 DNT--VASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGE------ 428
D T ++++ KKG AR V ++ FE A + TYN +I GL + G
Sbjct: 627 DLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASA 686
Query: 429 -----------------------------LCEAARLWDDMVEKGRAPNAFTYNLLINGFC 459
L EA +L+D M G P+ +YN +I
Sbjct: 687 VLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNS 746
Query: 460 KVGNAKEGIRILEEMCENGCLPNKST 485
K G KE + L+ M + GCLPN T
Sbjct: 747 KAGKLKEAYKYLKAMLDAGCLPNHVT 772
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 1/150 (0%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
N ++ + K + A VLD+M ++ +Y ++ G G D A VL +
Sbjct: 634 NSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTK 693
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
+G D Y L++ + RL A ++ D M+ NG+ P+ V+Y MIE K K E
Sbjct: 694 QGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKE 753
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEE 358
A L+ M+ G +P+ + ++D L +E
Sbjct: 754 AYKYLKAMLDAGCLPNH-VTDTILDYLGKE 782
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 87/193 (45%), Gaps = 3/193 (1%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYT--TVMGGYAWRGDMDGA 259
S +V N L ++ +A ++ + GMG V ++ SYT ++M + +G A
Sbjct: 591 SFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMG-VTDLTSYTYNSMMSSFVKKGYFQTA 649
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
VL ++ + A D TY V++ G + GR A V+D + + G + V Y +I A
Sbjct: 650 RGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINA 709
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
K + EA L + M G P +++V + G ++ A + + + N
Sbjct: 710 LGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPN 769
Query: 380 TVASTLIHWLCKK 392
V T++ +L K+
Sbjct: 770 HVTDTILDYLGKE 782
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 38/213 (17%)
Query: 245 TVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTV--LVDGFCRQGRLVAAIKVMDDME 302
T + Y +GD+ A ++ E+ + D T+YT ++ F ++G A V+D M
Sbjct: 599 TFLSIYLSKGDLSLACKLF-EIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMF 657
Query: 303 ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVE 362
EN + TY V+I+ G + + L V+D L ++G
Sbjct: 658 ENFCAADIATYNVIIQGL-------------------GKMGRADLASAVLDRLTKQGGY- 697
Query: 363 RACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIA 421
D + +TLI+ L K ++ EA +F+ + + +++YNT+I
Sbjct: 698 --------------LDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIE 743
Query: 422 GLCERGELCEAARLWDDMVEKGRAPNAFTYNLL 454
+ G+L EA + M++ G PN T +L
Sbjct: 744 VNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 146/345 (42%), Gaps = 38/345 (11%)
Query: 144 GLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSP 203
G G D L F + S+ G+ SV +N R+ + + + +SP
Sbjct: 152 GREGLLDKCLEVFDEMPSQ-GVSRSVFSYTALINAYGRNGRYETSLELLDRMKNE-KISP 209
Query: 204 NVVSCNILLKALCKVN-EVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
++++ N ++ A + + E + + EM G+ P++V+Y T++ A RG D A V
Sbjct: 210 SILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMV 269
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+ D G PD TTY+ LV+ F + RL ++ +M G P+ +Y V++EAY K
Sbjct: 270 FRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAK 329
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
EA+ + M G P++ NT
Sbjct: 330 SGSIKEAMGVFHQMQAAGCTPNA---------------------------------NTY- 355
Query: 383 STLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVE 441
S L++ + G+ + R +F E + + TYN LI E G E L+ DMVE
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ P+ TY +I K G ++ +IL+ M N +P+ Y
Sbjct: 416 ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAY 460
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 138/291 (47%), Gaps = 8/291 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P++ + + L++ K+ +E +L EM G +P++ SY ++ YA G + A
Sbjct: 277 GIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEA 336
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
M V ++ G P+A TY+VL++ F + GR ++ +M+ + P+ TY ++IE
Sbjct: 337 MGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEV 396
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD- 378
+ + E V L DMV + P ++ C +G + + ++L+ + +D
Sbjct: 397 FGEGGYFKEVVTLFHDMVEENIEPDMETYEGII-FACGKGGLHE--DARKILQYMTANDI 453
Query: 379 ---NTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAAR 434
+ + +I + EA F E GS S+ T+++L+ G + E+
Sbjct: 454 VPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEA 513
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+ +V+ G N T+N I + + G +E ++ +M ++ C P++ T
Sbjct: 514 ILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERT 564
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 137/301 (45%), Gaps = 7/301 (2%)
Query: 191 VFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY 250
+FK + + PN I++ L + ++ + V DEM G+ +V SYT ++ Y
Sbjct: 127 LFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAY 186
Query: 251 AWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQG-RLVAAIKVMDDMEENGVQPN 309
G + ++ +L + ++ +P TY +++ R G + + +M G+QP+
Sbjct: 187 GRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPD 246
Query: 310 EVTYGVMIEAYCKWKKPG-EAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW 368
VTY ++ A C + G EA + M G VP +V+ + +E+ C++
Sbjct: 247 IVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLL 305
Query: 369 RVLRKICGS--DNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCE 425
+ GS D T + L+ K G + EA VF + + G + TY+ L+ +
Sbjct: 306 GEMAS-GGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQ 364
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
G + +L+ +M P+A TYN+LI F + G KE + + +M E P+ T
Sbjct: 365 SGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMET 424
Query: 486 Y 486
Y
Sbjct: 425 Y 425
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 131/291 (45%), Gaps = 6/291 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P++ S N+LL+A K ++ A+ V +M G PN +Y+ ++ + G D
Sbjct: 312 GSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDV 371
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ E+ PDA TY +L++ F G + + DM E ++P+ TY +I A
Sbjct: 372 RQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFA 431
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
K +A +L+ M VPSS V++ + E A + + ++ GS+
Sbjct: 432 CGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEV-GSNP 490
Query: 380 TVAS--TLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLW 436
++ + +L++ + G V E+ + + G + T+N I + G+ EA + +
Sbjct: 491 SIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTY 550
Query: 437 DDMVEKGRA-PNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
DM EK R P+ T +++ + E EEM + LP+ Y
Sbjct: 551 VDM-EKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCY 600
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 115/262 (43%), Gaps = 11/262 (4%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ P+ + +++A + E A+ + M +G P++ ++ +++ +A G + +
Sbjct: 453 IVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESE 512
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+L ++D G + T+ ++ + + G+ A+K DME++ P+E T ++ Y
Sbjct: 513 AILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVY 572
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
+ E E+M +PS C ++ V G ER +V +L ++ + +
Sbjct: 573 SFARLVDECREQFEEMKASDILPSIMCYCMMLAVY---GKTERWDDVNELLEEMLSNRVS 629
Query: 381 VASTLIHWLCKKGKVLEARN------VFEEFEG-GSVASLLTYNTLIAGLCERGELCEAA 433
+I + KG + N V ++ G + YN L+ L G+ AA
Sbjct: 630 NIHQVIGQMI-KGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAA 688
Query: 434 RLWDDMVEKGRAPNAFTYNLLI 455
R+ ++ ++G P F N L+
Sbjct: 689 RVLNEATKRGLFPELFRKNKLV 710
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 152/355 (42%), Gaps = 69/355 (19%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGM-GLVPNVVSYTTVMGGYAWRGDMDG 258
GV NV + +I++ + CK V+ A+R+ G + NV YT ++ G+ +G MD
Sbjct: 337 GVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDK 396
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN--------- 309
A+ +L +LD G PD TY VL+ + L A+ ++ + +NG N
Sbjct: 397 AVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGN 456
Query: 310 --------------------EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKG--------- 340
V V+ A C + A++ +E MV G
Sbjct: 457 IEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYN 516
Query: 341 --------------------------HVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI 374
VP VV+ LC++ + + A + + ++
Sbjct: 517 SVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEEL 576
Query: 375 CGSDNTVA--STLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCE 431
G TVA S++I L K+G+V+EA F + E G + Y +I G + E
Sbjct: 577 -GLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDE 635
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A L +++V+ P++FTY +LI+GF K+G ++G + L++M E+G PN Y
Sbjct: 636 ANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLY 690
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 139/327 (42%), Gaps = 39/327 (11%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G +P S N ++K L + N +E +++ + + VP+V +Y V+ + D D
Sbjct: 506 LGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDA 565
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A ++ + + G P Y+ ++ +QGR+V A + M E+G+QP+E+ Y +MI
Sbjct: 566 AFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMIN 625
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
Y + + EA L+E++V+ PSS ++ + G +E+ C+ + + S
Sbjct: 626 TYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSP 685
Query: 379 NTVAST-LIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGL------------- 423
N V T LI KKG + +F + + Y TL++GL
Sbjct: 686 NVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVI 745
Query: 424 CERGELCEAARLWDD------------------------MVEKGRAPNAFTYNLLINGFC 459
E G+ RL V+K PN + +N +I G+C
Sbjct: 746 VEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYC 805
Query: 460 KVGNAKEGIRILEEMCENGCLPNKSTY 486
G E LE M + G +PN TY
Sbjct: 806 AAGRLDEAYNHLESMQKEGIVPNLVTY 832
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 178/409 (43%), Gaps = 36/409 (8%)
Query: 93 PLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGE-DPLVTAIRGYGLAGKPDS 151
P Y ++ L + ++ SL++ + Q LD + D + + D+
Sbjct: 512 PFSYNSVIKCLFQENIIEDLASLVNII------QELDFVPDVDTYLIVVNELCKKNDRDA 565
Query: 152 ALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNIL 211
A +E LG+RP+V + R A F G+ P+ ++ I+
Sbjct: 566 AFAIIDAME-ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAK-MLESGIQPDEIAYMIM 623
Query: 212 LKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGW 271
+ + ++ A +++E++ L P+ +YT ++ G+ G M+ + L ++L+ G
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Query: 272 APDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE----AYCKWKK-- 325
+P+ YT L+ F ++G + + M EN ++ + + Y ++ A + KK
Sbjct: 684 SPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQ 743
Query: 326 ----PGEAVNLLEDMVRKG---HVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
PG+ LL+ ++R +PSS L G+ A EV ++K +
Sbjct: 744 VIVEPGKE-KLLQRLIRTKPLVSIPSS---------LGNYGSKSFAMEVIGKVKKSIIPN 793
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ +T+I C G++ EA N E + G V +L+TY L+ E G++ A L++
Sbjct: 794 LYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE 853
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P+ Y+ L+ G C + + ++ EM ++G PNK +Y
Sbjct: 854 G---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSY 899
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 109/273 (39%), Gaps = 35/273 (12%)
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGE 265
V ++ ALC A+ +++M+ +G P SY +V+ ++ ++
Sbjct: 478 VGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNI 537
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK 325
+ + + PD TY ++V+ C++ AA ++D MEE G++P Y +I + K +
Sbjct: 538 IQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGR 597
Query: 326 PGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTL 385
EA M+ G P D +
Sbjct: 598 VVEAEETFAKMLESGIQP----------------------------------DEIAYMIM 623
Query: 386 IHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
I+ + G++ EA + EE + S TY LI+G + G + + + D M+E G
Sbjct: 624 INTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGL 683
Query: 445 APNAFTYNLLINGFCKVGNAKEGIRILEEMCEN 477
+PN Y LI F K G+ K + M EN
Sbjct: 684 SPNVVLYTALIGHFLKKGDFKFSFTLFGLMGEN 716
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 153/381 (40%), Gaps = 46/381 (12%)
Query: 138 TAIRGYGLAGKPDSALRTFLR-IESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSR 196
+ I G G+ A TF + +ES GI+P +N R A+ + +
Sbjct: 587 SIIGSLGKQGRVVEAEETFAKMLES--GIQPDEIAYMIMINTYARNGRIDEANELVEEVV 644
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
F + P+ + +L+ K+ +E + LD+ML GL PNVV YT ++G + +GD
Sbjct: 645 KHF-LRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDF 703
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQ---------------------------- 288
+ + G + + D Y L+ G R
Sbjct: 704 KFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPL 763
Query: 289 ----------GRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVR 338
G A++V+ ++++ + PN + +I YC + EA N LE M +
Sbjct: 764 VSIPSSLGNYGSKSFAMEVIGKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQK 822
Query: 339 KGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEA 398
+G VP+ ++ E G++E A +++ C D + STL+ LC + L+A
Sbjct: 823 EGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTN--CEPDQVMYSTLLKGLCDFKRPLDA 880
Query: 399 RNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
+ E + + + +Y L+ LC EA ++ DM P + + LI
Sbjct: 881 LALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYI 940
Query: 458 FCKVGNAKEGIRILEEMCENG 478
C+ +E + M ++G
Sbjct: 941 LCEEKKLREARALFAIMVQSG 961
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 17/231 (7%)
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK 325
V+ G PD++ +V + R A +D + +G P+ + ++++ C +
Sbjct: 122 VIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDR 181
Query: 326 PGEAVNLLEDMVRKGHVPSSGL---CCK-VVDVLCEEGNVERACEVWRVLRKICGSDN-- 379
EA + E + +G SGL CCK + LC G++ E +L +CG
Sbjct: 182 FLEAFHCFEQVKERG----SGLWLWCCKRLFKGLCGHGHLN---EAIGMLDTLCGMTRMP 234
Query: 380 ---TVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARL 435
+ +L + CK+G EA +F+ E G + Y L+ C+ + A RL
Sbjct: 235 LPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRL 294
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ MVE+ + +N LI+GF K+G +G + +M + G N TY
Sbjct: 295 YLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTY 345
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 33/273 (12%)
Query: 208 CNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVS-YTTVMGGYAWRGDMDGAMRVLGEV 266
C L K LC + A+ +LD + GM +P V+ Y ++ + RG A + +
Sbjct: 204 CKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHM 263
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
G+ D YT L+ +C+ + A+++ M E + + + +I + K
Sbjct: 264 EVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGML 323
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLI 386
+ + M++KG + ++ C+EGNV+ A R+ GS++
Sbjct: 324 DKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYA---LRLFVNNTGSEDI------ 374
Query: 387 HWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
+RNV Y LI G ++G + +A L M++ G P
Sbjct: 375 -----------SRNVH------------CYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVP 411
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
+ TY +L+ K K + IL+ + +NGC
Sbjct: 412 DHITYFVLLKMLPKCHELKYAMVILQSILDNGC 444
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 36/210 (17%)
Query: 236 LVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAI 295
++PN+ + T++ GY G +D A L + +G P+ TYT+L+ G + +AI
Sbjct: 790 IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAI 849
Query: 296 KVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVL 355
D E +P++V Y +++ C +K+P +A+ L+ +M + G P+ K++ L
Sbjct: 850 ---DLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCL 906
Query: 356 CEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLT 415
C E +V++ + D S WL
Sbjct: 907 CYS---RLTMEAVKVVKDMAALDIWPRSINHTWL-------------------------- 937
Query: 416 YNTLIAGLCERGELCEAARLWDDMVEKGRA 445
I LCE +L EA L+ MV+ GR+
Sbjct: 938 ----IYILCEEKKLREARALFAIMVQSGRS 963
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 116/266 (43%), Gaps = 6/266 (2%)
Query: 211 LLKALCKVNEVEVAVRVLDE-MLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
L++ L ++ + VA ++ ++G G+VP+ +++ D A L ++
Sbjct: 101 LIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRIIAS 160
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G+AP + +++VD C Q R + A + ++E G + + C EA
Sbjct: 161 GYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCGHGHLNEA 220
Query: 330 VNLLEDMVRKGHVP-SSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS--DNTVASTLI 386
+ +L+ + +P L + C+ G A ++ + ++ G D + + L+
Sbjct: 221 IGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHM-EVDGYYVDKVMYTCLM 279
Query: 387 HWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRA 445
CK + A ++ E +NTLI G + G L + ++ M++KG
Sbjct: 280 KEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQ 339
Query: 446 PNAFTYNLLINGFCKVGNAKEGIRIL 471
N FTY+++I +CK GN +R+
Sbjct: 340 SNVFTYHIMIGSYCKEGNVDYALRLF 365
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 156/341 (45%), Gaps = 11/341 (3%)
Query: 64 SLISRQHDPHLSLQIFRHAQTHHRASSHH--PLPYRAIFLKLSRARCFPEMESLLSTLPR 121
SL+ +++P L+I R + +H + + + L+R + F + LL +
Sbjct: 47 SLLKSENNPDRILEICRSTSL---SPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQ 103
Query: 122 HSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQ 181
+ P D E V AI YG A D +++TF +E + I +V+ +
Sbjct: 104 NQP----DPKSESFAVRAIILYGRANMLDRSIQTFRNLE-QYEIPRTVKSLNALLFACLM 158
Query: 182 NKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVV 241
K ++ A+ V+ +G+ P++ + N +++ LC+ + ++ EM + P
Sbjct: 159 AKDYKEANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAA 218
Query: 242 SYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
S+ ++ G+ D +V+ + + G TY +++ C++ + A ++D +
Sbjct: 219 SFGLMIDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGV 278
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
++PN VTY ++I +C + EA+NL E MV G+ P S ++ LC+ G+
Sbjct: 279 MSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDF 338
Query: 362 ERACEVWR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNV 401
E A + R + K +V L++ L + KV EA+ +
Sbjct: 339 ETALILCRESMEKNWVPSFSVMKWLVNGLASRSKVDEAKEL 379
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 33/182 (18%)
Query: 305 GVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
G++P+ TY MI C+ + +++ +M RK P++ ++D +E E+
Sbjct: 177 GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKE---EKF 233
Query: 365 CEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLC 424
EV +V+R + +EF G + TYN +I LC
Sbjct: 234 DEVRKVMR----------------------------MMDEF--GVHVGVATYNIMIQCLC 263
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
+R + EA L D ++ PN+ TY+LLI+GFC N E + + E M NG P+
Sbjct: 264 KRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAMNLFEVMVCNGYKPDSE 323
Query: 485 TY 486
Y
Sbjct: 324 CY 325
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 105/501 (20%), Positives = 197/501 (39%), Gaps = 92/501 (18%)
Query: 56 RLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHP--LPYRAIFLKLSRARCFPEME 113
+L + + SL+SR++D SL + H + + P Y + + RA+ F
Sbjct: 119 QLSIRFMVSLLSRENDWQRSLALLDWV---HEEAKYTPSVFAYNVVLRNVLRAKQFDIAH 175
Query: 114 SLLSTLPRHS--PQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRX 171
L + + + P ++ T I +G G DSAL ++E + V
Sbjct: 176 GLFDEMRQRALAPDRY-------TYSTLITSFGKEGMFDSALSWLQKME-----QDRVSG 223
Query: 172 XXXXXXXXVQNKR----HRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRV 227
++ R + A S+F + R G++P++V+ N ++ K A +
Sbjct: 224 DLVLYSNLIELSRRLCDYSKAISIFSRLK-RSGITPDLVAYNSMINVYGKAKLFREARLL 282
Query: 228 LDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCR 287
+ EM G++PN VSY+T++ Y A+ V E+ + A D TT +++D + +
Sbjct: 283 IKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQ 342
Query: 288 ------QGRLVAAIKVMDD-----------------------------MEENGVQPNEVT 312
RL +++ MD M+ ++ N VT
Sbjct: 343 LDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVT 402
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW---- 368
Y MI+ Y K + +A NL+++M +G P++ ++ + + G ++RA ++
Sbjct: 403 YNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLR 462
Query: 369 ----------------------------RVLRKICGSDNTVASTLIHWLCKKGKVLEARN 400
R+L ++ DN T I L K G+ EA
Sbjct: 463 SSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATW 522
Query: 401 VFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFC 459
VF + FE G V + + +I +++ M G P++ +++N +
Sbjct: 523 VFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYG 582
Query: 460 KVGNAKEGIRILEEMCENGCL 480
K ++ + EM E GC+
Sbjct: 583 KQREFEKADTVYREMQEEGCV 603
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 120/279 (43%), Gaps = 33/279 (11%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R + NVV+ N ++K K E E A ++ EM G+ PN ++Y+T++ + G +D
Sbjct: 393 RKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLD 452
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQG------RLVAAIKVMDDME--------- 302
A + ++ G D Y ++ + R G RL+ +K+ D++
Sbjct: 453 RAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILA 512
Query: 303 ----------------ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSG 346
E+G + +G MI Y + ++ + + E M G+ P S
Sbjct: 513 KAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSN 572
Query: 347 LCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEF 405
+ V++ ++ E+A V+R +++ C + V ++ K ++F+
Sbjct: 573 VIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRL 632
Query: 406 EGGSVASLLTYNTLIAGLCERGE-LCEAARLWDDMVEKG 443
E + + ++A L ER + L +A+R+ + M E+G
Sbjct: 633 ESDPNVNSKELHLVVAALYERADKLNDASRVMNRMRERG 671
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 137/317 (43%), Gaps = 37/317 (11%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+VV+ ++ E+E V + M+ GL PN+VSY +MG YA G A+ V
Sbjct: 318 PDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSV 377
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
LG++ G PD +YT L++ + R + A +V M + +PN VTY +I+AY
Sbjct: 378 LGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGS 437
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKV------------VDVLCEEGN---------- 360
EAV + M + G P+ C + VD +
Sbjct: 438 NGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAA 497
Query: 361 -------------VERACEVWRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE 406
+E+A +++ +R K +D+ + LI C+ K EA + +E E
Sbjct: 498 YNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEME 557
Query: 407 GGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
S+ + Y++++ ++G++ EA +++ M G P+ Y +++ +
Sbjct: 558 DLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 617
Query: 466 EGIRILEEMCENGCLPN 482
+ + EM NG P+
Sbjct: 618 KACELFLEMEANGIEPD 634
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 156/374 (41%), Gaps = 45/374 (12%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
N++++ + N V+ A + EM P+ +Y ++ + G AM ++ ++L
Sbjct: 147 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 206
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
AP +TY L++ G A++V M +NGV P+ VT+ +++ AY ++ +
Sbjct: 207 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 266
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI---CGSDNTVASTL 385
A++ E M P + ++ L + G +A +++ +R+ C D +++
Sbjct: 267 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 326
Query: 386 IHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKG- 443
+H KG++ R VFE G ++++YN L+ G A + D+ + G
Sbjct: 327 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 386
Query: 444 ----------------------------------RAPNAFTYNLLINGFCKVGNAKEGIR 469
R PN TYN LI+ + G E +
Sbjct: 387 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 446
Query: 470 ILEEMCENGCLPN-KSTYXXXXXXXXXXXXMNQEINKVVALAMSTGVDGELWDLLVKHVV 528
I +M ++G PN S +N ++ V++ A S G++ L +
Sbjct: 447 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN--VDTVLSAAQSRGIN--LNTAAYNSAI 502
Query: 529 GNLDINATELDRIL 542
G+ INA EL++ +
Sbjct: 503 GSY-INAAELEKAI 515
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 151/359 (42%), Gaps = 24/359 (6%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I YG G A+ F ++E GI+P+V ++K+ +V +++R
Sbjct: 432 IDAYGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR- 489
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++ N + N + + E+E A+ + M + + V++T ++ G A
Sbjct: 490 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 549
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ L E+ D Y+ ++ + +QG++ A + + M+ G +P+ + Y M+ A
Sbjct: 550 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 609
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
Y +K G+A L +M G P S C ++ + G + ++R +
Sbjct: 610 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR-----EK 664
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEGG------------SVASLLTYNTLIAGLCERG 427
+ T + ++ A N +E++ S++ LT N ++ + G
Sbjct: 665 EIPFTGAVFF----EIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT-NQMLHLFGKSG 719
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ +L+ ++ G N TY +L+ VGN ++ I +LE M G P+ Y
Sbjct: 720 KVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMY 778
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 118/282 (41%), Gaps = 18/282 (6%)
Query: 223 VAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM--------------DGAMRVLGEVLD 268
V +R L + L NV + + Y R D+ D A + E+
Sbjct: 112 VLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQK 171
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
PDA TY L++ R G+ A+ +MDDM + P+ TY +I A E
Sbjct: 172 WSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWRE 231
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIH 387
A+ + + M G P V+ +A + +++ D T + +I+
Sbjct: 232 ALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIY 291
Query: 388 WLCKKGKVLEARNVFE---EFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
L K G+ +A ++F E ++T+ +++ +GE+ +++ MV +G
Sbjct: 292 CLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL 351
Query: 445 APNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
PN +YN L+ + G + + +L ++ +NG +P+ +Y
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSY 393
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 113/279 (40%), Gaps = 2/279 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+VVS LL + + + A V M PNVV+Y ++ Y G + A
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 444
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + ++ G P+ + L+ R + V V+ + G+ N Y I +
Sbjct: 445 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 504
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-D 378
Y + +A+ L + M +K S ++ C A + + +
Sbjct: 505 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLT 564
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWD 437
V S+++ K+G+V EA ++F + + G ++ Y +++ + +A L+
Sbjct: 565 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL 624
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE 476
+M G P++ + L+ F K G +++ M E
Sbjct: 625 EMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE 663
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 155/375 (41%), Gaps = 38/375 (10%)
Query: 146 AGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSR-TRFGVSPN 204
+G+ S ++ + +RP + + A +F + R R P+
Sbjct: 128 SGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPD 187
Query: 205 VVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLG 264
VV+ ++ E+E V + M+ GL PN+VSY +MG YA G A+ VLG
Sbjct: 188 VVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLG 247
Query: 265 EVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWK 324
++ G PD +YT L++ + R + A +V M + +PN VTY +I+AY
Sbjct: 248 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 307
Query: 325 KPGEAVNLLEDMVRKGHVPSSGLCCKV------------VDVLCEEGN------------ 360
EAV + M + G P+ C + VD +
Sbjct: 308 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 367
Query: 361 -----------VERACEVWRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGG 408
+E+A +++ +R K +D+ + LI C+ K EA + +E E
Sbjct: 368 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 427
Query: 409 SVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEG 467
S+ + Y++++ ++G++ EA +++ M G P+ Y +++ + +
Sbjct: 428 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 487
Query: 468 IRILEEMCENGCLPN 482
+ EM NG P+
Sbjct: 488 CELFLEMEANGIEPD 502
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 156/374 (41%), Gaps = 45/374 (12%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
N++++ + N V+ A + EM P+ +Y ++ + G AM ++ ++L
Sbjct: 15 NMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLR 74
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
AP +TY L++ G A++V M +NGV P+ VT+ +++ AY ++ +
Sbjct: 75 AAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSK 134
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI---CGSDNTVASTL 385
A++ E M P + ++ L + G +A +++ +R+ C D +++
Sbjct: 135 ALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSI 194
Query: 386 IHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKG- 443
+H KG++ R VFE G ++++YN L+ G A + D+ + G
Sbjct: 195 MHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGI 254
Query: 444 ----------------------------------RAPNAFTYNLLINGFCKVGNAKEGIR 469
R PN TYN LI+ + G E +
Sbjct: 255 IPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVE 314
Query: 470 ILEEMCENGCLPN-KSTYXXXXXXXXXXXXMNQEINKVVALAMSTGVDGELWDLLVKHVV 528
I +M ++G PN S +N ++ V++ A S G++ L +
Sbjct: 315 IFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN--VDTVLSAAQSRGIN--LNTAAYNSAI 370
Query: 529 GNLDINATELDRIL 542
G+ INA EL++ +
Sbjct: 371 GSY-INAAELEKAI 383
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 151/359 (42%), Gaps = 24/359 (6%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I YG G A+ F ++E GI+P+V ++K+ +V +++R
Sbjct: 300 IDAYGSNGFLAEAVEIFRQMEQD-GIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSR- 357
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++ N + N + + E+E A+ + M + + V++T ++ G A
Sbjct: 358 GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEA 417
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ L E+ D Y+ ++ + +QG++ A + + M+ G +P+ + Y M+ A
Sbjct: 418 ISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHA 477
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
Y +K G+A L +M G P S C ++ + G + ++R +
Sbjct: 478 YNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMR-----EK 532
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEGG------------SVASLLTYNTLIAGLCERG 427
+ T + ++ A N +E++ S++ LT N ++ + G
Sbjct: 533 EIPFTGAVFF----EIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLT-NQMLHLFGKSG 587
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ +L+ ++ G N TY +L+ VGN ++ I +LE M G P+ Y
Sbjct: 588 KVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMY 646
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 113/279 (40%), Gaps = 2/279 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+VVS LL + + + A V M PNVV+Y ++ Y G + A
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEA 312
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + ++ G P+ + L+ R + V V+ + G+ N Y I +
Sbjct: 313 VEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 372
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS-D 378
Y + +A+ L + M +K S ++ C A + + +
Sbjct: 373 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLT 432
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWD 437
V S+++ K+G+V EA ++F + + G ++ Y +++ + +A L+
Sbjct: 433 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL 492
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE 476
+M G P++ + L+ F K G +++ M E
Sbjct: 493 EMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMRE 531
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 100/225 (44%), Gaps = 6/225 (2%)
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
+ K + Y +++ R + A + +M++ +P+ TY +I A+ + +
Sbjct: 3 IQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQW 62
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLI 386
A+NL++DM+R PS +++ GN A EV + + + V ++
Sbjct: 63 RWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIV 122
Query: 387 HWLCKKGKVL-EARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
K G+ +A + FE +G V T+N +I L + G+ +A L++ M EK R
Sbjct: 123 LSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREK-R 181
Query: 445 A---PNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A P+ T+ +++ + G + + E M G PN +Y
Sbjct: 182 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSY 226
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 155/375 (41%), Gaps = 16/375 (4%)
Query: 83 QTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRG 142
Q+ H +SS + Y I L + R F E + + + E +
Sbjct: 136 QSVHLSSS---MLYNEILDVLGKMRRFEEFHQVFDEMSKRDG-----FVNEKTYEVLLNR 187
Query: 143 YGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVS 202
Y A K D A+ F R GI + + K A ++F + R FG
Sbjct: 188 YAAAHKVDEAVGVFER-RKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC- 245
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
++ + N++L C + V A R +++ P+VVSY T++ +G + AM +
Sbjct: 246 -DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMEL 304
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+ D PD ++D C + R+ A++V ++ E G PN VTY +++ CK
Sbjct: 305 YRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCK 364
Query: 323 WKKPGEAVNLLEDMVRKGH--VPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
++ + L+E+M KG P+ ++ +V+ E R+ + C +
Sbjct: 365 IRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIVLE--RMAKNKCEMTSD 422
Query: 381 VASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDM 439
+ + + + K + R ++ E E G TY I GL +G++ EA + +M
Sbjct: 423 LYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEM 482
Query: 440 VEKGRAPNAFTYNLL 454
+ KG P T LL
Sbjct: 483 MSKGMVPEPRTEMLL 497
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 138/339 (40%), Gaps = 38/339 (11%)
Query: 183 KRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVS 242
+R H VF R G N + +LL ++V+ AV V + G+ ++V+
Sbjct: 157 RRFEEFHQVFDEMSKRDGFV-NEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVA 215
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
+ ++ ++ A L + + D ++++G+C G + A + D+
Sbjct: 216 FHGLLMWLCRYKHVEFA-ETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFWKDII 274
Query: 303 ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVE 362
+ +P+ V+YG MI A K K G+A+ L M P +C V+D LC + +
Sbjct: 275 ASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIP 334
Query: 363 RACEVWRVLRKICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFE--GGS-------VAS 412
A EV+R + + N V ++L+ LCK + + + EE E GGS +
Sbjct: 335 EALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSY 394
Query: 413 LLTYN-------------------------TLIAGLCERGELCEAAR-LWDDMVEKGRAP 446
LL Y+ L+ L + + E R +W +M G P
Sbjct: 395 LLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGP 454
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+ TY + I+G G E + +EM G +P T
Sbjct: 455 DQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRT 493
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 111/243 (45%), Gaps = 12/243 (4%)
Query: 255 DMDGAMR-------VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ 307
D+ G MR V E+ + + TY VL++ + ++ A+ V + +E G+
Sbjct: 151 DVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGID 210
Query: 308 PNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
+ V + ++ C++K A L R+ + +++ C GNV A
Sbjct: 211 DDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNM-ILNGWCVLGNVHEAKRF 269
Query: 368 WR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCE 425
W+ ++ C D T+I+ L KKGK+ +A ++ ++ + N +I LC
Sbjct: 270 WKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCF 329
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG--CLPNK 483
+ + EA ++ ++ EKG PN TYN L+ CK+ ++ ++EEM G C PN
Sbjct: 330 KKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPND 389
Query: 484 STY 486
T+
Sbjct: 390 VTF 392
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 19/320 (5%)
Query: 50 IKPWPHRLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCF 109
I P R P+ LA I+ + DP L +F A R + H Y KL A+ +
Sbjct: 130 ISKLPPRFTPEELADAITLEEDPFLCFHLFNWASQQPRFT-HENCSYHIAIRKLGAAKMY 188
Query: 110 PEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGL-AGKPDSALRTF--LRIESRLGIR 166
EM+ +++ + + H G + L +I Y AGK A+ F + L R
Sbjct: 189 QEMDDIVNQVLS------VRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECR 242
Query: 167 PSVRXXXXXXXXXV-QNKRHRLAHSVFKNSRTRF------GVSPNVVSCNILLKALCKVN 219
P++R + + + H + R+ F G+ P+V + N L+K
Sbjct: 243 PTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSL 302
Query: 220 EVEVAVRVLDEM-LGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTY 278
V A+R+ +M + PN +Y ++ G +G A +L E+ KG+ P+ +Y
Sbjct: 303 HVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSY 362
Query: 279 TVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVR 338
LV+ F G + A+K + +M ENG + ++Y +++ C+ K EA LLE M+R
Sbjct: 363 NSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLE-MLR 421
Query: 339 KGHVPSSGLCCKVVDVLCEE 358
+ + K+V+VL ++
Sbjct: 422 EKQLVDRDSYDKLVNVLHKD 441
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 108/254 (42%), Gaps = 18/254 (7%)
Query: 247 MGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG- 305
+G +MD ++ +VL + Y ++ F + G+L+ A+ + M +
Sbjct: 182 LGAAKMYQEMDD---IVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKN 238
Query: 306 --VQPNEVTYGVMIEA--------YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVL 355
+P TY ++ +A Y +L MV G P +V
Sbjct: 239 LECRPTIRTYHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGY 298
Query: 356 CEEGNVERACEVWRVLRKI--CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVAS 412
+V A ++ + + C ++ LIH LC +G+ + AR + E +G G V +
Sbjct: 299 VLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPN 358
Query: 413 LLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILE 472
+YN+L+ GE+ +A + +M+E GR + +Y L++ C+ G E R+L
Sbjct: 359 GKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLL- 417
Query: 473 EMCENGCLPNKSTY 486
EM L ++ +Y
Sbjct: 418 EMLREKQLVDRDSY 431
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 92/232 (39%), Gaps = 18/232 (7%)
Query: 309 NEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHV---PSSGLCCKVVDVLCEEGNVERAC 365
NE Y +I + K K AVN+ MV ++ P+ + L GN
Sbjct: 206 NENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYIN 265
Query: 366 EVW-----RVLRKICGSDNTVASTLIHWLC-KKGKVLE--ARNVFEEFEGGSVA-----S 412
V+ + R++ D+ + + C KG VL + F SV +
Sbjct: 266 HVYMETVRSLFRQMV--DSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPN 323
Query: 413 LLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILE 472
TY+ LI GLC +G A L +M KG PN +YN L+N F G + ++ L
Sbjct: 324 SFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLW 383
Query: 473 EMCENGCLPNKSTYXXXXXXXXXXXXMNQEINKVVALAMSTGVDGELWDLLV 524
EM ENG + + +Y ++ + L VD + +D LV
Sbjct: 384 EMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREKQLVDRDSYDKLV 435
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/428 (20%), Positives = 164/428 (38%), Gaps = 48/428 (11%)
Query: 56 RLHPKLLASLISRQHDPH-LSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMES 114
+L P L+ ++ + + L+L +F+ A+ + + H Y A+ L + + F + S
Sbjct: 91 KLSPALIEEVLKKLSNAGVLALSVFKWAE-NQKGFKHTTSNYNALIESLGKIKQFKLIWS 149
Query: 115 LLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXX 174
L+ + ++ L ++ R Y A K A+ F ++E
Sbjct: 150 LVDDMK---AKKLL---SKETFALISRRYARARKVKEAIGAFHKMEE------------- 190
Query: 175 XXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGM 234
FG N +L L K V A +V D+M
Sbjct: 191 ------------------------FGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKK 226
Query: 235 GLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAA 294
P++ SYT ++ G+ ++ V E+ D+G+ PD Y ++++ C+ + A
Sbjct: 227 RFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
Query: 295 IKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDV 354
I+ ++ME+ +P+ + +I KK +A+ E G + +V
Sbjct: 287 IRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 355 LCEEGNVERACEVWRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASL 413
C +E A + +R K G + ++H L + + EA V++ S
Sbjct: 347 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMSCEPTVS- 405
Query: 414 LTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEE 473
TY ++ C + L A ++WD+M KG P ++ LI C E E
Sbjct: 406 -TYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNE 464
Query: 474 MCENGCLP 481
M + G P
Sbjct: 465 MLDVGIRP 472
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 140/334 (41%), Gaps = 70/334 (20%)
Query: 187 LAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLG------------- 233
LA SVFK + + G + N L+++L K+ + ++ ++D+M
Sbjct: 110 LALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKKLLSKETFALIS 169
Query: 234 ---------------------MGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWA 272
G + ++ + ++ A +V ++ K +
Sbjct: 170 RRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFE 229
Query: 273 PDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNL 332
PD +YT+L++G+ ++ L+ +V +M++ G +P+ V YG++I A+CK KK EA+
Sbjct: 230 PDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRF 289
Query: 333 LEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKK 392
+M ++ PS + C +++ L E + A E + +
Sbjct: 290 FNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSK------------------SS 331
Query: 393 GKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYN 452
G LEA TYN L+ C + +A + D+M KG PNA TY+
Sbjct: 332 GFPLEAP---------------TYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYD 376
Query: 453 LLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++++ ++ +KE + + M C P STY
Sbjct: 377 IILHHLIRMQRSKEAYEVYQTM---SCEPTVSTY 407
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 118/285 (41%), Gaps = 19/285 (6%)
Query: 97 RAIFLKLSRARCFPEMESL----------LSTLPRHSPQQFLDHCGEDPLVTA----IRG 142
+ +F K+ + R P+++S L+ L + + G +P V A I
Sbjct: 217 QKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINA 276
Query: 143 YGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVS 202
+ A K + A+R F +E R +PS K+ A F+ S++ G
Sbjct: 277 HCKAKKYEEAIRFFNEMEQR-NCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSS-GFP 334
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
+ N L+ A C +E A + +DEM G+ PN +Y ++ A V
Sbjct: 335 LEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEV 394
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+ P +TY ++V FC + RL AIK+ D+M+ GV P + +I A C
Sbjct: 395 YQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCH 451
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
K EA +M+ G P + ++ L +EG ++ ++
Sbjct: 452 ENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDL 496
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 80/141 (56%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R+ + P ++ N ++ CK + V+ A R+LD M G P+VV+++T++ GY +D
Sbjct: 3 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 62
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
M + E+ +G + TYT L+ GFC+ G L AA ++++M GV P+ +T+ M+
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCML 122
Query: 318 EAYCKWKKPGEAVNLLEDMVR 338
C K+ +A +LED+ +
Sbjct: 123 AGLCSKKELRKAFAILEDLQK 143
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 64/111 (57%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
+S G SP+VV+ + L+ CK V+ + + EM G+V N V+YTT++ G+
Sbjct: 34 DSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQV 93
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN 304
GD+D A +L E++ G APD T+ ++ G C + L A +++D++++
Sbjct: 94 GDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 144
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 8/128 (6%)
Query: 231 MLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGR 290
ML + P ++Y +++ G+ + +D A R+L + KG +PD T++ L++G+C+ R
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 291 LVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS------ 344
+ +++ +M G+ N VTY +I +C+ A +LL +M+ G P
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC 120
Query: 345 --SGLCCK 350
+GLC K
Sbjct: 121 MLAGLCSK 128
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 35/170 (20%)
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERAC 365
+ P +TY MI+ +CK + +A +L+ M KG
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG------------------------- 40
Query: 366 EVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLC 424
C D STLI+ CK +V +F E G VA+ +TY TLI G C
Sbjct: 41 ---------CSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 91
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+ G+L A L ++M+ G AP+ T++ ++ G C ++ ILE++
Sbjct: 92 QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 141
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%)
Query: 412 SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRIL 471
+ +TYN++I G C++ + +A R+ D M KG +P+ T++ LING+CK G+ I
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 472 EEMCENGCLPNKSTY 486
EM G + N TY
Sbjct: 69 CEMHRRGIVANTVTY 83
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 383 STLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+++I CK+ +V +A+ + + G ++T++TLI G C+ + ++ +M
Sbjct: 14 NSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHR 73
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+G N TY LI+GFC+VG+ +L EM G P+ T+
Sbjct: 74 RGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 118
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 148/331 (44%), Gaps = 7/331 (2%)
Query: 205 VVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR-VL 263
V+ N+++KA E A + + M+ G+ P+ +Y T++ A DM R L
Sbjct: 505 VIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILA-SADMPHKGRCYL 563
Query: 264 GEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKW 323
++ + G+ D Y ++ F + G+L A +V +M E ++P+ V YGV+I A+
Sbjct: 564 EKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADT 623
Query: 324 KKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS----DN 379
+A++ +E M G +S + ++ + + G ++ A ++R L + C D
Sbjct: 624 GNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDV 683
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDM 439
++ +I+ ++ V +A +F+ + A+ T+ ++ + G EA ++ M
Sbjct: 684 YTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Query: 440 VEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTYXXXXXXXXXXXXM 499
E + +YN ++ F G KE + +EM +G P+ ST+
Sbjct: 744 REMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMS 803
Query: 500 NQEINKVVALAMSTGVDG-ELWDLLVKHVVG 529
+ + K+ + G ELW + +VG
Sbjct: 804 KKAVRKIEEIRKKEIKRGLELWISTLSSLVG 834
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 130/284 (45%), Gaps = 4/284 (1%)
Query: 195 SRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRG 254
S +GV+P+ + N L++ L + L++M G V + + Y V+ + G
Sbjct: 530 SMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLG 589
Query: 255 DMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYG 314
++ A V E+++ PD Y VL++ F G + A+ ++ M+E G+ N V Y
Sbjct: 590 QLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYN 649
Query: 315 VMIEAYCKWKKPGEAVNLLEDMVR---KGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
+I+ Y K EA + +++ K P ++++ E V +A ++ +
Sbjct: 650 SLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSM 709
Query: 372 RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELC 430
++ ++ + ++ K G+ EA + ++ E + L+YN+++ G
Sbjct: 710 KQRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFK 769
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
EA + +MV G P+ T+ L K+G +K+ +R +EE+
Sbjct: 770 EAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEI 813
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 144/353 (40%), Gaps = 11/353 (3%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I YG +G+ A TF R+ GI P+ N + S+ K
Sbjct: 303 TMIDTYGKSGQIKEASETFKRMLEE-GIVPTTVTFNTMIHIYGNNGQLGEVTSLMKT--M 359
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ +P+ + NIL+ K N++E A EM GL P+ VSY T++ ++ R ++
Sbjct: 360 KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVE 419
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ E+ D D T + L + L + G +E Y I
Sbjct: 420 EAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE-GYSANI 478
Query: 318 EAYCK--WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI- 374
+AY + + E V + V K V + K + + E+ACE++ +
Sbjct: 479 DAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGI---SKSCEKACELFESMMSYG 535
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAA 433
D +TL+ L + R E+ E G V+ + Y +I+ + G+L A
Sbjct: 536 VTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAE 595
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
++ +MVE P+ Y +LIN F GN ++ + +E M E G N Y
Sbjct: 596 EVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIY 648
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 30/223 (13%)
Query: 265 EVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWK 324
E++ KG P +TY L+D + + G V A+ + M + G+QP+EVT G++++ Y K +
Sbjct: 212 EMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAR 271
Query: 325 KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAST 384
+ +A E+ +K C+E + +C S T +T
Sbjct: 272 EFQKA----EEFFKKWS--------------CDENKAD---------SHVCLSSYTY-NT 303
Query: 385 LIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKG 443
+I K G++ EA F+ E G V + +T+NT+I G+L E L M +
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM-KLH 362
Query: 444 RAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
AP+ TYN+LI+ K + + +EM ++G P+ +Y
Sbjct: 363 CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSY 405
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 114/265 (43%), Gaps = 11/265 (4%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A +F+ +++ NV+ NI+L+ L K + + DEM+ G+ P +Y T++
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 248 GGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVM------DDM 301
Y+ G A+ LG++ G PD T +++ + + A + ++
Sbjct: 230 DVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENK 289
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
++ V + TY MI+ Y K + EA + M+ +G VP++ ++ + G +
Sbjct: 290 ADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQL 349
Query: 362 ERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLI 420
+ + ++ C D + LI K + A F+E + G ++Y TL+
Sbjct: 350 GEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLL 409
Query: 421 AGLCERGELCEA----ARLWDDMVE 441
R + EA A + DD VE
Sbjct: 410 YAFSIRHMVEEAEGLIAEMDDDNVE 434
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+VV+ N L+ CK E+E A +++D+M P+V++YTTV+GG G D A
Sbjct: 241 GLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKA 300
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
VL E+ + G PD Y + FC RL A K++D+M + G+ PN TY +
Sbjct: 301 REVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRV 360
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW 368
G + L M+ +P++ C ++ + V+ A +W
Sbjct: 361 LSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLW 409
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 7/273 (2%)
Query: 181 QNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNV 240
Q K A +V+ + + +F P++ + NILL E A +EM G GL P+V
Sbjct: 192 QEKSMTDARNVYHSLKHQF--QPDLQTFNILLSGW---KSSEEAEAFFEEMKGKGLKPDV 246
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD 300
V+Y +++ Y +++ A +++ ++ ++ PD TYT ++ G G+ A +V+ +
Sbjct: 247 VTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKE 306
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
M+E G P+ Y I +C ++ G+A L+++MV+KG P++ VL +
Sbjct: 307 MKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLAND 366
Query: 361 VERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASL-LTYNT 418
+ R+ E++ R+L C + LI + KV A ++E+ S L +
Sbjct: 367 LGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDV 426
Query: 419 LIAGLCERGELCEAARLWDDMVEKGRAPNAFTY 451
L+ LC+ ++ EA + +MVEKG P+ ++
Sbjct: 427 LLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSF 459
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 6/214 (2%)
Query: 274 DATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLL 333
D + L+ C++ + A V ++ QP+ T+ +++ WK EA
Sbjct: 179 DTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSG---WKSSEEAEAFF 234
Query: 334 EDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIHWLCKK 392
E+M KG P ++DV C++ +E+A ++ +R+ + + + +T+I L
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 393 GKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTY 451
G+ +AR V +E E G + YN I C L +A +L D+MV+KG +PNA TY
Sbjct: 295 GQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 452 NLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
NL + + M N CLPN +
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQS 388
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 40/168 (23%)
Query: 359 GNVERACEV-------WRVLRKICGS-DNTVASTLIHWLCKKGKVLEARNVFEEFE---- 406
G V + C V W+ R + D + L+ LC++ + +ARNV+ +
Sbjct: 152 GRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQ 211
Query: 407 ----------------------------GGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
G ++TYN+LI C+ E+ +A +L D
Sbjct: 212 PDLQTFNILLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDK 271
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
M E+ P+ TY +I G +G + +L+EM E GC P+ + Y
Sbjct: 272 MREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAY 319
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 88/224 (39%), Gaps = 38/224 (16%)
Query: 137 VTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSR 196
T I G GL G+PD A V K +
Sbjct: 285 TTVIGGLGLIGQPDK------------------------------------AREVLKEMK 308
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
+G P+V + N ++ C + A +++DEM+ GL PN +Y + D+
Sbjct: 309 -EYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDL 367
Query: 257 DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
+ + +L P+ + L+ F R ++ A+++ +DM G + V+
Sbjct: 368 GRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVL 427
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
++ C K EA L +MV KGH PS+ + K + +L E N
Sbjct: 428 LDLLCDLAKVEEAEKCLLEMVEKGHRPSN-VSFKRIKLLMELAN 470
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 160/348 (45%), Gaps = 29/348 (8%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T I GY +G+ D AL F + R ++ VQ R A ++F+
Sbjct: 145 TMIDGYAQSGRIDKALELFDEMPER-----NIVSWNSMVKALVQRGRIDEAMNLFERMPR 199
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R +VVS ++ L K +V+ A R+ D M N++S+ ++ GYA +D
Sbjct: 200 R-----DVVSWTAMVDGLAKNGKVDEARRLFDCMPE----RNIISWNAMITGYAQNNRID 250
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ + ++ +A ++ ++ GF R + A + D M E V +++ MI
Sbjct: 251 EADQLFQVMPERDFA----SWNTMITGFIRNREMNKACGLFDRMPEKNV----ISWTTMI 302
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHV-PSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG 376
Y + K+ EA+N+ M+R G V P+ G ++ + + ++ +++ K
Sbjct: 303 TGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVH 362
Query: 377 SDN-TVASTLIHWLCKKGKVLEARNVFEEFEGGSVA--SLLTYNTLIAGLCERGELCEAA 433
N V S L++ K G+++ AR +F+ G V L+++N++IA G EA
Sbjct: 363 QKNEIVTSALLNMYSKSGELIAARKMFD---NGLVCQRDLISWNSMIAVYAHHGHGKEAI 419
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLP 481
+++ M + G P+A TY L+ G ++G+ +++ + LP
Sbjct: 420 EMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLP 467
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 139/316 (43%), Gaps = 57/316 (18%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVP-NVVSYTTVMGGYAWRGDMDGAMR 261
P V L+ LCKV ++ A ++ D GL +VV++T V+ GY GDM A
Sbjct: 44 PRVPQPEWLIGELCKVGKIAEARKLFD-----GLPERDVVTWTHVITGYIKLGDMREARE 98
Query: 262 VLGEVLDKG----WAP------------------------DATTYTVLVDGFCRQGRLVA 293
+ V + W + ++ ++DG+ + GR+
Sbjct: 99 LFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDK 158
Query: 294 AIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVD 353
A+++ D+M E + V++ M++A + + EA+NL E M R+ V + + VD
Sbjct: 159 ALELFDEMPERNI----VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAM----VD 210
Query: 354 VLCEEGNVERACEVWRVLRKICGSDNTVAS--TLIHWLCKKGKVLEARNVFEEFEGGSVA 411
L + G V+ A ++ C + + S +I + ++ EA +F+ A
Sbjct: 211 GLAKNGKVDEARRLFD-----CMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFA 265
Query: 412 SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRIL 471
S +NT+I G E+ +A L+D M EK N ++ +I G+ + +E + +
Sbjct: 266 S---WNTMITGFIRNREMNKACGLFDRMPEK----NVISWTTMITGYVENKENEEALNVF 318
Query: 472 EEMCENGCL-PNKSTY 486
+M +G + PN TY
Sbjct: 319 SKMLRDGSVKPNVGTY 334
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 124/284 (43%), Gaps = 34/284 (11%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV + ++ + ++ + N A+ + M GL+P+ V+Y+ ++ Y+ G ++
Sbjct: 216 GVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEV 275
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + + GW PDA ++VL F G V+ +M+ V+PN V Y ++EA
Sbjct: 276 LSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEA 335
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+ KPG A +L +M+ G P+ +V + + A ++W ++
Sbjct: 336 MGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMK------- 388
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDM 439
KK + + YNTL+ + G EA RL++DM
Sbjct: 389 ----------AKKWPM----------------DFILYNTLLNMCADIGLEEEAERLFNDM 422
Query: 440 VEKGRA-PNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
E + P+ F+Y ++N + G A++ + + EEM + G N
Sbjct: 423 KESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVN 466
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 104/225 (46%), Gaps = 3/225 (1%)
Query: 265 EVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWK 324
E++ G D TY+ ++ R AI+ + M + G+ P+EVTY +++ Y K
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 325 KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-S 383
K E ++L E V G P + + + E G+ + V + ++ + N V +
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 384 TLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEK 442
TL+ + + GK AR++F E E G + T L+ + +A +LW++M K
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAK 390
Query: 443 GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCEN-GCLPNKSTY 486
+ YN L+N +G +E R+ +M E+ C P+ +Y
Sbjct: 391 KWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSY 435
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 107/229 (46%), Gaps = 7/229 (3%)
Query: 134 DPLVTAIRG--YGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSV 191
D + ++ G +G AG D +R L+ + ++P+V + + LA S+
Sbjct: 290 DAIAFSVLGKMFGEAGDYD-GIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSL 348
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F N G++PN + L+K K A+++ +EM + + Y T++ A
Sbjct: 349 F-NEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCA 407
Query: 252 WRGDMDGAMRVLGEVLDKGWA-PDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
G + A R+ ++ + PD +YT +++ + G+ A+++ ++M + GVQ N
Sbjct: 408 DIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNV 467
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDV--LCE 357
+ +++ K K+ + V + + +++G P LC ++ V LCE
Sbjct: 468 MGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCE 516
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 135/288 (46%), Gaps = 8/288 (2%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P + N+++ K ++ ++ ++ EM PN+ +YT ++ +A G + A +
Sbjct: 284 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 343
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
++ + G PD Y L++ + R G A ++ M+ G +P+ +Y +M++AY +
Sbjct: 344 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 403
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS----D 378
+A + E+M R G P+ ++ + +V + CE +++++ + D
Sbjct: 404 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK-CEA--IVKEMSENGVEPD 460
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGG-SVASLLTYNTLIAGLCERGELCEAARLWD 437
V +++++ + G+ + + E E G A + TYN LI + G L L+
Sbjct: 461 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 520
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
++ EK P+ T+ I + + + + + EEM ++GC P+ T
Sbjct: 521 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 568
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 127/286 (44%), Gaps = 6/286 (2%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+V+ N+L+ A + + + A + ++L VP +Y ++ Y G ++ A V
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 263 LGEVLDKGWAPDA---TTYTVLVDGFC-RQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
L E+ + +P T Y ++G R+G AI V M+ + +P TY +MI
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGS 377
Y K K + L +M P+ +V+ EG E+A E++ L++
Sbjct: 295 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 354
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLW 436
D V + L+ + G A +F + G +YN ++ G +A ++
Sbjct: 355 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 414
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
++M G AP ++ LL++ + K + + I++EM ENG P+
Sbjct: 415 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 2/234 (0%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
+ Y AG P A F + +G P + H A +VF+ + R
Sbjct: 363 MESYSRAGYPYGAAEIF-SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK-RL 420
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++P + S +LL A K +V ++ EM G+ P+ +++ Y G
Sbjct: 421 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM 480
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++L E+ + D +TY +L++ + + G L ++ +++E +P+ VT+ I A
Sbjct: 481 EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 540
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
Y + K + + + E+M+ G P G ++ E VE+ V R + K
Sbjct: 541 YSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 594
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 114/258 (44%), Gaps = 12/258 (4%)
Query: 238 PNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKV 297
P+V+ + ++ Y + A + ++L+ + P TY +L+ +C G + A V
Sbjct: 175 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 234
Query: 298 MDDMEENGVQPNEV---TYGVMIEAYCKWK-KPGEAVNLLEDMVRKGHVPSSGLCCKVVD 353
+ +M+ + V P + Y IE K K EA+++ + M R P++ +++
Sbjct: 235 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 294
Query: 354 VLCEEGNVERACEVWRVLRKI----CGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGG 408
+ G ++ W++ ++ C + + L++ ++G +A +FE+ E G
Sbjct: 295 LY---GKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 351
Query: 409 SVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGI 468
+ YN L+ G AA ++ M G P+ +YN++++ + + G +
Sbjct: 352 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 411
Query: 469 RILEEMCENGCLPNKSTY 486
+ EEM G P ++
Sbjct: 412 AVFEEMKRLGIAPTMKSH 429
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
+ ++ QP+ + + ++I+AY + + EA +L ++ +VP+ ++ C G
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 227
Query: 361 VERACEVWRVLRKICGSDNTVASTLIH-----WLCKKGKVLEARNVFEEFEGGSVA-SLL 414
+ERA V ++ S T+ T+ + + +KG EA +VF+ + +
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
TYN +I + + + +L+ +M PN TY L+N F + G ++ I E++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 475 CENGCLPNKSTY 486
E+G P+ Y
Sbjct: 348 QEDGLEPDVYVY 359
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 8/224 (3%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+V N L+++ + A + M MG P+ SY ++ Y G A
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 410
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
V E+ G AP ++ +L+ + + + ++ +M ENGV+P+ M+
Sbjct: 411 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 470
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICGSD 378
Y + + + +L +M ++++ + G +ER E++ L+ K D
Sbjct: 471 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 530
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-------EGGSVASLLT 415
++ I +K ++ VFEE +GG+ LL+
Sbjct: 531 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 574
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/288 (21%), Positives = 135/288 (46%), Gaps = 8/288 (2%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P + N+++ K ++ ++ ++ EM PN+ +YT ++ +A G + A +
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEI 321
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
++ + G PD Y L++ + R G A ++ M+ G +P+ +Y +M++AY +
Sbjct: 322 FEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGR 381
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS----D 378
+A + E+M R G P+ ++ + +V + CE +++++ + D
Sbjct: 382 AGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTK-CEA--IVKEMSENGVEPD 438
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGG-SVASLLTYNTLIAGLCERGELCEAARLWD 437
V +++++ + G+ + + E E G A + TYN LI + G L L+
Sbjct: 439 TFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFV 498
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
++ EK P+ T+ I + + + + + EEM ++GC P+ T
Sbjct: 499 ELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGT 546
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 127/286 (44%), Gaps = 6/286 (2%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+V+ N+L+ A + + + A + ++L VP +Y ++ Y G ++ A V
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 263 LGEVLDKGWAPDA---TTYTVLVDGFC-RQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
L E+ + +P T Y ++G R+G AI V M+ + +P TY +MI
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGS 377
Y K K + L +M P+ +V+ EG E+A E++ L++
Sbjct: 273 LYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP 332
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLW 436
D V + L+ + G A +F + G +YN ++ G +A ++
Sbjct: 333 DVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVF 392
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
++M G AP ++ LL++ + K + + I++EM ENG P+
Sbjct: 393 EEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 2/234 (0%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
+ Y AG P A F + +G P + H A +VF+ + R
Sbjct: 341 MESYSRAGYPYGAAEIF-SLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK-RL 398
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G++P + S +LL A K +V ++ EM G+ P+ +++ Y G
Sbjct: 399 GIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKM 458
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++L E+ + D +TY +L++ + + G L ++ +++E +P+ VT+ I A
Sbjct: 459 EKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGA 518
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
Y + K + + + E+M+ G P G ++ E VE+ V R + K
Sbjct: 519 YSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTMHK 572
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 114/258 (44%), Gaps = 12/258 (4%)
Query: 238 PNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKV 297
P+V+ + ++ Y + A + ++L+ + P TY +L+ +C G + A V
Sbjct: 153 PDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVV 212
Query: 298 MDDMEENGVQPNEV---TYGVMIEAYCKWK-KPGEAVNLLEDMVRKGHVPSSGLCCKVVD 353
+ +M+ + V P + Y IE K K EA+++ + M R P++ +++
Sbjct: 213 LVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMIN 272
Query: 354 VLCEEGNVERACEVWRVLRKI----CGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGG 408
+ G ++ W++ ++ C + + L++ ++G +A +FE+ E G
Sbjct: 273 LY---GKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 329
Query: 409 SVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGI 468
+ YN L+ G AA ++ M G P+ +YN++++ + + G +
Sbjct: 330 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 389
Query: 469 RILEEMCENGCLPNKSTY 486
+ EEM G P ++
Sbjct: 390 AVFEEMKRLGIAPTMKSH 407
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 90/192 (46%), Gaps = 6/192 (3%)
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
+ ++ QP+ + + ++I+AY + + EA +L ++ +VP+ ++ C G
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGL 205
Query: 361 VERACEVWRVLRKICGSDNTVASTLIH-----WLCKKGKVLEARNVFEEFEGGSVA-SLL 414
+ERA V ++ S T+ T+ + + +KG EA +VF+ + +
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
TYN +I + + + +L+ +M PN TY L+N F + G ++ I E++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 475 CENGCLPNKSTY 486
E+G P+ Y
Sbjct: 326 QEDGLEPDVYVY 337
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 94/224 (41%), Gaps = 8/224 (3%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+V N L+++ + A + M MG P+ SY ++ Y G A
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDA 388
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
V E+ G AP ++ +L+ + + + ++ +M ENGV+P+ M+
Sbjct: 389 EAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICGSD 378
Y + + + +L +M ++++ + G +ER E++ L+ K D
Sbjct: 449 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 508
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEF-------EGGSVASLLT 415
++ I +K ++ VFEE +GG+ LL+
Sbjct: 509 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLS 552
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 46/213 (21%)
Query: 274 DATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLL 333
D Y +++ G C+ G+ A + ++ +G+QP+ TY +MI ++ G A L
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 334 EDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKG 393
+M+R+G VP D +++IH LCK+
Sbjct: 69 AEMIRRGLVP----------------------------------DTITYNSMIHGLCKQN 94
Query: 394 KVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNL 453
K+ +AR V + S T+NTLI G C+ + + L+ +M +G N TY
Sbjct: 95 KLAQARKVSK--------SCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTT 146
Query: 454 LINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
LI+GF +VG+ + I +EM NG + T+
Sbjct: 147 LIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 97/228 (42%), Gaps = 48/228 (21%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
NI++ LCK + + A + +L GL P+V +Y +M ++ G A ++ E++
Sbjct: 18 NIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTY-NMMIRFSSLGR---AEKLYAEMIR 73
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
+G PD TY ++ G C+Q +L A KV T+ +I YCK + +
Sbjct: 74 RGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS---------TFNTLINGYCKATRVKD 124
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHW 388
+NL +M R+G V NV +TLIH
Sbjct: 125 GMNLFCEMYRRGIVA----------------NV------------------ITYTTLIHG 150
Query: 389 LCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARL 435
+ G A ++F+E G +S +T+ ++ LC R EL +A +
Sbjct: 151 FRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAM 198
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 97/234 (41%), Gaps = 48/234 (20%)
Query: 239 NVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVM 298
+ Y ++ G G D A + +L G PD TY +++ F GR A K+
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR-FSSLGR---AEKLY 68
Query: 299 DDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEE 358
+M G+ P+ +TY MI CK K +A RK
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNKLAQA--------RK------------------- 101
Query: 359 GNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVF-EEFEGGSVASLLTYN 417
V ++C + +TLI+ CK +V + N+F E + G VA+++TY
Sbjct: 102 --VSKSCSTF--------------NTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYT 145
Query: 418 TLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRIL 471
TLI G + G+ A ++ +MV G ++ T+ ++ C ++ + +L
Sbjct: 146 TLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 15/194 (7%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
I G AGK D A F + G++P V+ + +L + R
Sbjct: 21 IHGLCKAGKFDEAGNIFTNLLIS-GLQPDVQTYNMMIRFSSLGRAEKLYAEMI-----RR 74
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+ ++ N ++ LCK N++ A +V + ++ T++ GY +
Sbjct: 75 GLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSCSTFNTLINGYCKATRVKDG 125
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
M + E+ +G + TYT L+ GF + G A+ + +M NGV + +T+ ++
Sbjct: 126 MNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQ 185
Query: 320 YCKWKKPGEAVNLL 333
C K+ +AV +L
Sbjct: 186 LCSRKELRKAVAML 199
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+V + N++++ + + A ++ EM+ GLVP+ ++Y +++ G + + A
Sbjct: 44 GLQPDVQTYNMMIR----FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA 99
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+V + +T+ L++G+C+ R+ + + +M G+ N +TY +I
Sbjct: 100 RKV---------SKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHG 150
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+ + A+++ ++MV G SS ++ LC + +A V +L+K N
Sbjct: 151 FRQVGDFNTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKA--VAMLLQKSSMVSN 208
Query: 380 TVA 382
V
Sbjct: 209 NVT 211
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 112/256 (43%), Gaps = 38/256 (14%)
Query: 236 LVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL---DKGWAPDATTYTVLVDGFCRQGRLV 292
P+ YTT+M GY G + R+L + D+ PD TYT +V F G +
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMD 469
Query: 293 AAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVV 352
A +V+ +M GV N +TY V+++ YCK + A +LL +M
Sbjct: 470 RARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMT--------------- 514
Query: 353 DVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA- 411
E+ +E + ++ C + A L F E +A
Sbjct: 515 ----EDAGIEPDVVSYNIIIDGCILIDDSAGALAF--------------FNEMRTRGIAP 556
Query: 412 SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP-NAFTYNLLINGFCKVGNAKEGIRI 470
+ ++Y TL+ G+ A R++D+M+ R + +N+L+ G+C++G ++ R+
Sbjct: 557 TKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRV 616
Query: 471 LEEMCENGCLPNKSTY 486
+ M ENG PN +TY
Sbjct: 617 VSRMKENGFYPNVATY 632
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 6/151 (3%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+VVS NI++ +++ A+ +EM G+ P +SYTT+M +A G A
Sbjct: 518 GIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLA 577
Query: 260 MRVLGEVL-DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
RV E++ D D + +LV+G+CR G + A +V+ M+ENG PN TYG +
Sbjct: 578 NRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLAN 637
Query: 319 AYCKWKKPGEAVNLLEDM-----VRKGHVPS 344
+ +KPG+A+ L +++ V+K PS
Sbjct: 638 GVSQARKPGDALLLWKEIKERCAVKKKEAPS 668
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 138/315 (43%), Gaps = 34/315 (10%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEML---GMGLVPNVVSYTTVMGGYAWRGDMDG 258
+P+ L+K K V R+L+ M P+ V+YTTV+ + G MD
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN-GVQPNEVTYGVMI 317
A +VL E+ G + TY VL+ G+C+Q ++ A ++ +M E+ G++P+ V+Y ++I
Sbjct: 471 ARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIII 530
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
+ A+ +M +G P+ ++ G + A V+ + +
Sbjct: 531 DGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMM----N 586
Query: 378 DNTVASTLIHW------LCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELC 430
D V LI W C+ G + +A+ V E G ++ TY +L G+ + +
Sbjct: 587 DPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPG 646
Query: 431 EAARLWDDM-----VEKGRAPNAFT--------------YNLLINGFCKVGNAKEGIRIL 471
+A LW ++ V+K AP+ + + L + + K+ + I+
Sbjct: 647 DALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEII 706
Query: 472 EEMCENGCLPNKSTY 486
M ENG PNK+ Y
Sbjct: 707 ACMEENGIPPNKTKY 721
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 86/212 (40%), Gaps = 24/212 (11%)
Query: 125 QQFLDHCGEDPLVTA----IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXV 180
++ + G +P V + I G L AL F + +R GI P+
Sbjct: 511 REMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTR-GIAPTKISYTTLMKAFA 569
Query: 181 QNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNV 240
+ + +LA+ VF V ++++ N+L++ C++ +E A RV+ M G PNV
Sbjct: 570 MSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDK-------------------GWAPDATTYTVL 281
+Y ++ G + A+ + E+ ++ PD L
Sbjct: 630 ATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTL 689
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
D R A++++ MEENG+ PN+ Y
Sbjct: 690 ADICVRAAFFKKALEIIACMEENGIPPNKTKY 721
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 161/367 (43%), Gaps = 9/367 (2%)
Query: 126 QFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRH 185
FL+ E+ L +R K SAL F + LG++P+ ++N
Sbjct: 100 HFLEERNEETLSKRLRKLSRLDKVRSALELFDSMRF-LGLQPNAHACNSFLSCLLRNGDI 158
Query: 186 RLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEML---GMGLVPNVVS 242
+ A +VF+ R + V+ + S ++LKA+ +V E A+R+ E+ +VV
Sbjct: 159 QKAFTVFEFMRKKENVTGHTYS--LMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVL 216
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
Y T + ++ R+ + G TY++LV F R GR A+ V D+M
Sbjct: 217 YNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMV 276
Query: 303 ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVE 362
N + E MI A K +K A+ + + M++KG P+ C +++ L + G V
Sbjct: 277 NNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVG 336
Query: 363 RACEVWRVLRKICGS-DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASL--LTYNTL 419
+V+ VL+ + D + L+ L K + + +F+ ++ L YNT
Sbjct: 337 LVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTA 396
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
+ + G +A +L +M G + +YNL+I+ K +K + + E M + C
Sbjct: 397 MVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDC 456
Query: 480 LPNKSTY 486
PN TY
Sbjct: 457 KPNTFTY 463
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 105/253 (41%), Gaps = 8/253 (3%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
++ A K + ++A+++ ML G+ PN+V+ T++ G + +V + G
Sbjct: 290 MISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLG 349
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDM-EENGVQPNEVTYGVMIEAYCKWKKPGEA 329
PD T+ L+ + R +++ D + EN NE Y + + K +A
Sbjct: 350 HKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKA 409
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVER-ACEVWRVLRKICGSDNTVASTLIHW 388
V LL +M G S+ V+ CE+ + A V+ + + NT +
Sbjct: 410 VKLLYEMEGSGLTVSTSSYNLVISA-CEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVR 468
Query: 389 LCKKGKVL-EARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPN 447
C G + E ++ ++ E + YN I G+C R E A L+ M E G P+
Sbjct: 469 SCIWGSLWDEVEDILKKVE----PDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPD 524
Query: 448 AFTYNLLINGFCK 460
T +++ K
Sbjct: 525 GKTRAMMLQNLKK 537
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 158/358 (44%), Gaps = 41/358 (11%)
Query: 130 HCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAH 189
+ E + I YG G + A R L + S++G P+V + + A
Sbjct: 136 NFSEIDFLMLITAYGKLGNFNGAERV-LSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 190 SVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG---LVPNVVSYTTV 246
++F+ ++ G P+ ++ I+LK + ++ + A V + +L L P+ Y +
Sbjct: 195 AIFRRMQSS-GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMM 253
Query: 247 MGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
+ Y G+ + A +V ++ KG TY L+ F + V+ K+ D M+ + +
Sbjct: 254 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM-SFETSYKEVS--KIYDQMQRSDI 310
Query: 307 QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE 366
QP+ V+Y ++I+AY + ++ EA+++ E+M+ G P+ ++D G VE+A
Sbjct: 311 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKT 370
Query: 367 VWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCER 426
V++ +R+ +F + L +Y T+++
Sbjct: 371 VFKSMRR-------------------------DRIFPD--------LWSYTTMLSAYVNA 397
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
++ A + + + G PN TY LI G+ K + ++ + + E+M +G N++
Sbjct: 398 SDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQT 455
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 35/247 (14%)
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD 300
+ + ++ Y G+ +GA RVL + G P+ +YT L++ + R G+ A +
Sbjct: 140 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 199
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
M+ +G +P+ +TY ++++ + + K EA + E ++ + P
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP----------------- 242
Query: 361 VERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTL 419
D + +I+ K G +AR VF G V S +TYN+L
Sbjct: 243 --------------LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 288
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
++ E ++++D M P+ +Y LLI + + +E + + EEM + G
Sbjct: 289 MSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 345
Query: 480 LPNKSTY 486
P Y
Sbjct: 346 RPTHKAY 352
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 126/282 (44%), Gaps = 8/282 (2%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
+L+ A K+ A RVL + MG PNV+SYT +M Y G + A + +
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 203
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMD---DMEENGVQPNEVTYGVMIEAYCKWKKP 326
G P A TY +++ F + A +V + D +++ ++P++ Y +MI Y K
Sbjct: 204 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 263
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTL 385
+A + MV KG VP S + ++ E + + +++ ++ R D + L
Sbjct: 264 EKARKVFSSMVGKG-VPQSTVTYN--SLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 386 IHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
I + + EA +VFEE + G + YN L+ G + +A ++ M
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 380
Query: 445 APNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P+ ++Y +++ + + + + + + +G PN TY
Sbjct: 381 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 422
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 8/225 (3%)
Query: 162 RLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEV 221
R I+P V + +R A SVF+ GV P + NILL A V
Sbjct: 307 RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMV 365
Query: 222 EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVL 281
E A V M + P++ SYTT++ Y DM+GA + + G+ P+ TY L
Sbjct: 366 EQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTL 425
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
+ G+ + + ++V + M +G++ N+ +++A + K G A+ ++M G
Sbjct: 426 IKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGV 485
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVW-------RVLRKICGSDN 379
P ++ + + +E A E+ ++ ++ GSD+
Sbjct: 486 PPDQKAKNVLLSLASTQDELEEAKELTGIRNETATIIARVYGSDD 530
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 133/352 (37%), Gaps = 49/352 (13%)
Query: 128 LDHCGEDPLVTA----IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNK 183
L G P V + + YG GK ++A F R++S G PS V+
Sbjct: 165 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS-GPEPSAITYQIILKTFVEGD 223
Query: 184 RHRLAHSVFKN-------------------------------SRTRF------GVSPNVV 206
+ + A VF+ +R F GV + V
Sbjct: 224 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 283
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+ N L+ EV ++ D+M + P+VVSY ++ Y + A+ V E+
Sbjct: 284 TYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 340
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
LD G P Y +L+D F G + A V M + + P+ +Y M+ AY
Sbjct: 341 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 400
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG--SDNTVAST 384
A + + G P+ ++ + +VE+ EV+ +R + G ++ T+ +T
Sbjct: 401 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR-LSGIKANQTILTT 459
Query: 385 LIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARL 435
++ + A ++E E G N L++ + EL EA L
Sbjct: 460 IMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 511
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 150/343 (43%), Gaps = 8/343 (2%)
Query: 62 LASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPR 121
L +L++ + DP + F+ A + + R + +L+ A+ F +E +L
Sbjct: 41 LITLVNDERDPKFITEKFKKACQAEWFRKNIAVYERTV-RRLAAAKKFEWVEEIL----- 94
Query: 122 HSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQ 181
++ + E + I YG G ++A + F + R R ++ V
Sbjct: 95 EEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTAL-SFNALLNACVN 153
Query: 182 NKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVV 241
+K+ L +FK + + P+V S N L+K LC AV ++DE+ GL P+ +
Sbjct: 154 SKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHI 213
Query: 242 SYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
++ ++ +G + ++ +++K D +Y + G + + + + D +
Sbjct: 214 TFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKL 273
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
+ N ++P+ T+ MI+ + K EA+ +++ + G P + ++ +C+ G++
Sbjct: 274 KGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDL 333
Query: 362 ERACEVWR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFE 403
E A E+ + + K D V ++ L K K EA + E
Sbjct: 334 ESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/262 (20%), Positives = 107/262 (40%), Gaps = 40/262 (15%)
Query: 217 KVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK-GWAPDA 275
+V E A +V DEM +S+ ++ D + E+ K PD
Sbjct: 118 RVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDV 177
Query: 276 TTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI-EAYCKWKKPGEAVNLLE 334
+Y L+ G C +G A+ ++D++E G++P+ +T+ +++ E+Y K
Sbjct: 178 ASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTK------------ 225
Query: 335 DMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKG 393
G E ++W R++ K D + + L +
Sbjct: 226 ------------------------GKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMEN 261
Query: 394 KVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYN 452
K E ++F++ +G + + T+ +I G G+L EA + ++ + G P F +N
Sbjct: 262 KSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFN 321
Query: 453 LLINGFCKVGNAKEGIRILEEM 474
L+ CK G+ + + +E+
Sbjct: 322 SLLPAICKAGDLESAYELCKEI 343
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 88/209 (42%), Gaps = 3/209 (1%)
Query: 281 LVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKG 340
+++ + R G A KV D+M E + +++ ++ A KK + +++ K
Sbjct: 112 IINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKL 171
Query: 341 HV-PSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSDNTVASTLIHWLCKKGKVLEA 398
+ P ++ LC +G+ A + + K D+ + L+H KGK E
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEG 231
Query: 399 RNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
++ E + +YN + GL + E L+D + P+ FT+ +I G
Sbjct: 232 EQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKG 291
Query: 458 FCKVGNAKEGIRILEEMCENGCLPNKSTY 486
F G E I +E+ +NGC P K +
Sbjct: 292 FVSEGKLDEAITWYKEIEKNGCRPLKFVF 320
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 74/158 (46%), Gaps = 3/158 (1%)
Query: 332 LLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL-RKICGSDNTVASTLIHWLC 390
+LE+ + ++ G +++++ G E A +V+ + + C + L++
Sbjct: 93 ILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACV 152
Query: 391 KKGKVLEARNVFEEFEGG-SVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
K +F+E G S+ + +YNTLI GLC +G EA L D++ KG P+
Sbjct: 153 NSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDH 212
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
T+N+L++ G +EG +I M E + +Y
Sbjct: 213 ITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSY 250
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 158/358 (44%), Gaps = 41/358 (11%)
Query: 130 HCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAH 189
+ E + I YG G + A R L + S++G P+V + + A
Sbjct: 143 NFSEIDFLMLITAYGKLGNFNGAERV-LSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 201
Query: 190 SVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG---LVPNVVSYTTV 246
++F+ ++ G P+ ++ I+LK + ++ + A V + +L L P+ Y +
Sbjct: 202 AIFRRMQSS-GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMM 260
Query: 247 MGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
+ Y G+ + A +V ++ KG TY L+ F + V+ K+ D M+ + +
Sbjct: 261 IYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLM-SFETSYKEVS--KIYDQMQRSDI 317
Query: 307 QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE 366
QP+ V+Y ++I+AY + ++ EA+++ E+M+ G P+ ++D G VE+A
Sbjct: 318 QPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKT 377
Query: 367 VWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCER 426
V++ +R+ +F + L +Y T+++
Sbjct: 378 VFKSMRR-------------------------DRIFPD--------LWSYTTMLSAYVNA 404
Query: 427 GELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
++ A + + + G PN TY LI G+ K + ++ + + E+M +G N++
Sbjct: 405 SDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQT 462
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 104/247 (42%), Gaps = 35/247 (14%)
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD 300
+ + ++ Y G+ +GA RVL + G P+ +YT L++ + R G+ A +
Sbjct: 147 IDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRR 206
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
M+ +G +P+ +TY ++++ + + K EA + E ++ + P
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSP----------------- 249
Query: 361 VERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTL 419
D + +I+ K G +AR VF G V S +TYN+L
Sbjct: 250 --------------LKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL 295
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
++ E ++++D M P+ +Y LLI + + +E + + EEM + G
Sbjct: 296 MSF---ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGV 352
Query: 480 LPNKSTY 486
P Y
Sbjct: 353 RPTHKAY 359
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 126/282 (44%), Gaps = 8/282 (2%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
+L+ A K+ A RVL + MG PNV+SYT +M Y G + A + +
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS 210
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMD---DMEENGVQPNEVTYGVMIEAYCKWKKP 326
G P A TY +++ F + A +V + D +++ ++P++ Y +MI Y K
Sbjct: 211 GPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNY 270
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTL 385
+A + MV KG VP S + ++ E + + +++ ++ R D + L
Sbjct: 271 EKARKVFSSMVGKG-VPQSTVTYN--SLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALL 327
Query: 386 IHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGR 444
I + + EA +VFEE + G + YN L+ G + +A ++ M
Sbjct: 328 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRI 387
Query: 445 APNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P+ ++Y +++ + + + + + + +G PN TY
Sbjct: 388 FPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTY 429
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 8/225 (3%)
Query: 162 RLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEV 221
R I+P V + +R A SVF+ GV P + NILL A V
Sbjct: 314 RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDA-GVRPTHKAYNILLDAFAISGMV 372
Query: 222 EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVL 281
E A V M + P++ SYTT++ Y DM+GA + + G+ P+ TY L
Sbjct: 373 EQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTL 432
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
+ G+ + + ++V + M +G++ N+ +++A + K G A+ ++M G
Sbjct: 433 IKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGV 492
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVW-------RVLRKICGSDN 379
P ++ + + +E A E+ ++ ++ GSD+
Sbjct: 493 PPDQKAKNVLLSLASTQDELEEAKELTGIRNETATIIARVYGSDD 537
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 133/352 (37%), Gaps = 49/352 (13%)
Query: 128 LDHCGEDPLVTA----IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNK 183
L G P V + + YG GK ++A F R++S G PS V+
Sbjct: 172 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSS-GPEPSAITYQIILKTFVEGD 230
Query: 184 RHRLAHSVFKN-------------------------------SRTRF------GVSPNVV 206
+ + A VF+ +R F GV + V
Sbjct: 231 KFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV 290
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+ N L+ EV ++ D+M + P+VVSY ++ Y + A+ V E+
Sbjct: 291 TYNSLMSFETSYKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEM 347
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
LD G P Y +L+D F G + A V M + + P+ +Y M+ AY
Sbjct: 348 LDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDM 407
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG--SDNTVAST 384
A + + G P+ ++ + +VE+ EV+ +R + G ++ T+ +T
Sbjct: 408 EGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR-LSGIKANQTILTT 466
Query: 385 LIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARL 435
++ + A ++E E G N L++ + EL EA L
Sbjct: 467 IMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKEL 518
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 114/257 (44%), Gaps = 38/257 (14%)
Query: 210 ILLKALCKVNEVEVAV--RVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL 267
ILL C+ + ++ RVL+ M+ GL P+ V+ + G +D A ++ E+
Sbjct: 127 ILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELT 186
Query: 268 DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN-GVQPNEVTYGVMIEAYCKWKKP 326
+K PD TY L+ C+ L + +D+M ++ V+P+ V++ ++I+ C K
Sbjct: 187 EKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNL 246
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLI 386
EA+ L+ + G P C ++ +T++
Sbjct: 247 REAMYLVSKLGNAGFKPD--------------------CFLY--------------NTIM 272
Query: 387 HWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRA 445
C K EA V+++ E G +TYNTLI GL + G + EA MV+ G
Sbjct: 273 KGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYE 332
Query: 446 PNAFTYNLLINGFCKVG 462
P+ TY L+NG C+ G
Sbjct: 333 PDTATYTSLMNGMCRKG 349
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 83/158 (52%), Gaps = 1/158 (0%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLG-MGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
P+ + N LLK LCK ++ V +DEM + P++VS+T ++ ++ AM
Sbjct: 192 PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMY 251
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
++ ++ + G+ PD Y ++ GFC + A+ V M+E GV+P+++TY +I
Sbjct: 252 LVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLS 311
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEG 359
K + EA L+ MV G+ P + +++ +C +G
Sbjct: 312 KAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 114/251 (45%), Gaps = 7/251 (2%)
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDK--GWAPDATTYTVLVDGFCR--QGRLVAAIKVM 298
+ +V+ Y ++ +++ +L + P +T+ +L+ CR + +V+
Sbjct: 88 HNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVL 147
Query: 299 DDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEE 358
+ M NG++P++VT + + + C+ + EA +L++++ K P + ++ LC+
Sbjct: 148 NLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKC 207
Query: 359 GNVERACEVWRVLRKI--CGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLT 415
++ E +R D + LI +C + EA + + G
Sbjct: 208 KDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFL 267
Query: 416 YNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMC 475
YNT++ G C + EA ++ M E+G P+ TYN LI G K G +E L+ M
Sbjct: 268 YNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV 327
Query: 476 ENGCLPNKSTY 486
+ G P+ +TY
Sbjct: 328 DAGYEPDTATY 338
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%)
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
R F V P++VS IL+ +C + A+ ++ ++ G P+ Y T+M G+
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
A+ V ++ ++G PD TY L+ G + GR+ A + M + G +P+ TY
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTS 340
Query: 316 MIEAYCK 322
++ C+
Sbjct: 341 LMNGMCR 347
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 51/90 (56%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P+ N ++K C +++ AV V +M G+ P+ ++Y T++ G + G ++ A
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQG 289
L ++D G+ PD TYT L++G CR+G
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 143/305 (46%), Gaps = 17/305 (5%)
Query: 184 RHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSY 243
+ + A VF + FG +PN + + L+ALCK + ++ A V ++ML G++
Sbjct: 246 KSKAAFDVFSKTE-EFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQM 304
Query: 244 TTVMGGYAWRGDMDGAMRV--LGEVLDKGWAPDATTYTVLVDGFCR-QGRLVAAIKVMDD 300
++ + G + A V L + +K P L+ C+ G + A +++ D
Sbjct: 305 GNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLGD 362
Query: 301 ME----ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC 356
+ G++P + +I + C+ + +A LL DM+ KG P + + VV
Sbjct: 363 LSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACS 418
Query: 357 EEGNVERACEVWRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGG-SVASLL 414
+ G+++ A EV +++ + D + +I K G + EA+ + E + S +
Sbjct: 419 KTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPV 478
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFC-KVGNAKEGIRILEE 473
TY+ LI G C+ E EA +L ++M G PNA YN LI FC K + ++ + EE
Sbjct: 479 TYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEE 538
Query: 474 MCENG 478
M + G
Sbjct: 539 MKQKG 543
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 15/174 (8%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G +P N+++ A K +++ A VL M GL P+V +YT ++ GYA G MD A
Sbjct: 402 GPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEA 461
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+L E K TY L+ G+C+ A+K++++M+ GVQPN Y +I++
Sbjct: 462 QEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQS 521
Query: 320 YC----KWKKPGEAVNLLEDMVRKG---HVPSSGLCCKVVDV-----LCEEGNV 361
+C W+K A L E+M +KG + S GL V ++ + E+GN+
Sbjct: 522 FCLKALDWEK---AEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKVTEDGNL 572
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 88/182 (48%), Gaps = 17/182 (9%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEML--GMGLVPNVVSYTTVMGGYAWRGDM 256
+ P+V + N ++ ALC+V + A +LD+M G P+ +YT ++ Y G
Sbjct: 194 YHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQ 253
Query: 257 DG-----------AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
G A R+ E+L +G+ PD TY L+DG C+ R+ A+++ +DM+ G
Sbjct: 254 TGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKG 313
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH-VPSSGLCCKVVDVLCEEGNVERA 364
PN+VTY I Y + A+ ++ M + GH VP S ++ L E RA
Sbjct: 314 CVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVE---TRRA 370
Query: 365 CE 366
E
Sbjct: 371 AE 372
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 107/274 (39%), Gaps = 45/274 (16%)
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
S L+K L + V+ A+ M P+V +Y T++ G+ A +L
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 264 GEVLDKG--WAPDATTYTVLVDGFCRQG-----------RLVAAIKVMDDMEENGVQPNE 310
++ G + PD TYT+L+ +CR G R+ A ++ +M G P+
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV 370
VTY +I+ CK + G A+ L EDM KG VP+ + +E A E+ R
Sbjct: 284 VTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRT 343
Query: 371 LRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELC 430
++K+ G V TY LI L E
Sbjct: 344 MKKL--------------------------------GHGVPGSSTYTPLIHALVETRRAA 371
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNA 464
EA L +MVE G P +TY L+ + G A
Sbjct: 372 EARDLVVEMVEAGLVPREYTYKLVCDALSSEGLA 405
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 339 KGHVPSSGLCCKVVDVLCEEGNVERA-CEVWRVLRKICGSDNTVASTLIHWLCKKGKVLE 397
K V ++ + C ++ L EEG V+ A +R+ C D +T+I+ LC+ G +
Sbjct: 160 KNVVTTASITC-LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKK 218
Query: 398 ARNVFEEFEGGSV---ASLLTYNTLIAGLCERG-----------ELCEAARLWDDMVEKG 443
AR + ++ + TY LI+ C G + EA R++ +M+ +G
Sbjct: 219 ARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRG 278
Query: 444 RAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P+ TYN LI+G CK + + E+M GC+PN+ TY
Sbjct: 279 FVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTY 321
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 25/242 (10%)
Query: 144 GLAGKPDSALRTFL-----RIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTR 198
G PD+ T L R + G R ++R +R A+ +F+ R
Sbjct: 230 GFRYPPDTYTYTILISSYCRYGMQTGCRKAIR------------RRMWEANRMFREMLFR 277
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
G P+VV+ N L+ CK N + A+ + ++M G VPN V+Y + + Y+ +++G
Sbjct: 278 -GFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEG 336
Query: 259 AMRVLGEVLDKGWA-PDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A+ ++ + G P ++TYT L+ R A ++ +M E G+ P E TY ++
Sbjct: 337 AIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVC 396
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
+A G A L E++ ++ G+ + V+ + + R V + KI G+
Sbjct: 397 DA---LSSEGLASTLDEELHKRMR---EGIQQRYSRVMKIKPTMARKEVVRKYFHKIDGN 450
Query: 378 DN 379
N
Sbjct: 451 QN 452
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 88/212 (41%), Gaps = 27/212 (12%)
Query: 279 TVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVR 338
T L+ +G + A+ M+E +P+ Y +I A C+ +A LL+ M
Sbjct: 169 TCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQL 228
Query: 339 KG--HVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVL 396
G + P + ++ C G ++ C + +R+ ++
Sbjct: 229 PGFRYPPDTYTYTILISSYCRYG-MQTGCR--KAIRR--------------------RMW 265
Query: 397 EARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLI 455
EA +F E G V ++TYN LI G C+ + A L++DM KG PN TYN I
Sbjct: 266 EANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFI 325
Query: 456 NGFCKVGNAKEGIRILEEMCENG-CLPNKSTY 486
+ + I ++ M + G +P STY
Sbjct: 326 RYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTY 357
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/317 (22%), Positives = 145/317 (45%), Gaps = 23/317 (7%)
Query: 180 VQNKRHRLAH---SVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEM-LGMG 235
+++++ R+ H SVF++ + S V + + +K K+ ++V D + +G
Sbjct: 150 IRDRKFRITHCLLSVFRSDK-----SLAVSASDAAMKGFNKLQMYSSTIQVFDRLKQSVG 204
Query: 236 LVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWA----PDATTYTVLVDGFCRQGRL 291
+ P+ Y +M + G+ + + E + + + YT++ + GR
Sbjct: 205 VEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRA 264
Query: 292 VAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKV 351
A++V+++M++ G+ + Y ++I A+ + ++ L ++ K + +C KV
Sbjct: 265 FEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKV 324
Query: 352 VDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVF-----EEF 405
V + EGN+E EV +RK + + +++ K+ EA V+ EE
Sbjct: 325 VLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEEC 384
Query: 406 EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
E G V TY I C + +A L+D+MV+KG Y+ +++ + K
Sbjct: 385 EAGQV----TYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLS 440
Query: 466 EGIRILEEMCENGCLPN 482
+ +R++ +M + GC PN
Sbjct: 441 DAVRLMAKMKQRGCKPN 457
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 106/222 (47%), Gaps = 9/222 (4%)
Query: 206 VSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGE 265
V+ I + A C++ + A + DEM+ G VV+Y+ +M Y + A+R++ +
Sbjct: 389 VTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAK 448
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK 325
+ +G P+ Y L+D R L A K+ +M+ V P++V+Y MI AY + K+
Sbjct: 449 MKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKE 508
Query: 326 PGEAVNLLEDM-VRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR--KICGS--DNT 380
V L ++ + +G + + +V V + ++ E+ R+L+ K+ G+ D
Sbjct: 509 LERCVELYQEFRMNRGKI-DRAMAGIMVGVFSKTSRID---ELMRLLQDMKVEGTRLDAR 564
Query: 381 VASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAG 422
+ S+ ++ L G + R + E F+ ++ NT G
Sbjct: 565 LYSSALNALRDAGLNSQIRWLQESFDAAQTSTSKYSNTKNTG 606
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/385 (20%), Positives = 152/385 (39%), Gaps = 50/385 (12%)
Query: 139 AIRGYGLAGKPDSALRTFLRIESRLGIRPS----VRXXXXXXXXXVQNKRHRLAHSVFKN 194
A++G+ S ++ F R++ +G+ PS R +K L FK+
Sbjct: 179 AMKGFNKLQMYSSTIQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQE-FKS 237
Query: 195 SRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM------- 247
R F + I+ +L K A+ VL+EM G+ + Y+ ++
Sbjct: 238 QRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAR 297
Query: 248 ------------GG----------------YAWRGDMDGAMRVLGEVLDKGWAPDATTYT 279
GG Y G+M+ + V+ +
Sbjct: 298 EVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILC 357
Query: 280 VLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRK 339
+V+GF +Q A+KV + + + +VTY + I AYC+ +K +A L ++MV+K
Sbjct: 358 AIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKK 417
Query: 340 GHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI----CGSDNTVASTLIHWLCKKGKV 395
G ++D+ G R + R++ K+ C + + ++LI + +
Sbjct: 418 GFDKCVVAYSNIMDMY---GKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDL 474
Query: 396 LEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDM-VEKGRAPNAFTYNL 453
A +++E + V ++Y ++I+ EL L+ + + +G+ A +
Sbjct: 475 RRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMA-GI 533
Query: 454 LINGFCKVGNAKEGIRILEEMCENG 478
++ F K E +R+L++M G
Sbjct: 534 MVGVFSKTSRIDELMRLLQDMKVEG 558
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/231 (20%), Positives = 104/231 (45%), Gaps = 5/231 (2%)
Query: 246 VMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
++ G++ + A++V + + TY + ++ +CR + A + D+M + G
Sbjct: 359 IVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKG 418
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERAC 365
V Y +++ Y K ++ +AV L+ M ++G P+ + ++D+ ++ RA
Sbjct: 419 FDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAE 478
Query: 366 EVWRVLRKICGSDNTVASTLIHWLCKKGKVLE-ARNVFEEFE--GGSVASLLTYNTLIAG 422
++W+ +++ + V+ T + + K LE +++EF G + + ++
Sbjct: 479 KIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMA-GIMVGV 537
Query: 423 LCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEE 473
+ + E RL DM +G +A Y+ +N G IR L+E
Sbjct: 538 FSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAG-LNSQIRWLQE 587
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/160 (21%), Positives = 72/160 (45%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G VV+ + ++ K + AVR++ +M G PN+ Y +++ + D+ A
Sbjct: 418 GFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRA 477
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ E+ PD +YT ++ + R L +++ + N + + G+M+
Sbjct: 478 EKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGV 537
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEG 359
+ K + E + LL+DM +G + L ++ L + G
Sbjct: 538 FSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAG 577
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 143/310 (46%), Gaps = 14/310 (4%)
Query: 64 SLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHS 123
S + ++HDP +L+I+ + H + +L++ R F ++E+L+ + ++
Sbjct: 38 STLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIES-HKND 96
Query: 124 PQQFLDHCGEDPLV-TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQN 182
P+ E+P T IR YG A + A+RTF +++ + G S + +
Sbjct: 97 PK-----IKEEPFYSTLIRSYGQASMFNHAMRTFEQMD-QYGTPRSAVSFNALLNACLHS 150
Query: 183 KRHRLAHSVFKNSRTRFG-VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVV 241
K +F R+ + P+ +S IL+K+ C E A+ ++ +M G G+ +
Sbjct: 151 KNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTI 210
Query: 242 SYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQG--RLVAAIKVMD 299
++TT++ +G+++ A + E++ KG D Y V + ++ R+ I+ M
Sbjct: 211 AFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMS 270
Query: 300 DMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEG 359
M G++P+ ++Y ++ AYC+ EA + E + P++ ++ LC
Sbjct: 271 SM---GLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSR 327
Query: 360 NVERACEVWR 369
E+ +++
Sbjct: 328 LYEQGYAIFK 337
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 117/247 (47%), Gaps = 5/247 (2%)
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
Y+T++ Y + AMR ++ G A ++ L++ ++ D++
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIP 164
Query: 303 E--NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
+ N + P++++YG++I++YC P +A+ ++ M KG ++ ++ L ++G
Sbjct: 165 QRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGE 224
Query: 361 VERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNT 418
+E A +W +++K C DN + I +K + + EE G ++YN
Sbjct: 225 LEVADNLWNEMVKKGCELDNAAYNVRI-MSAQKESPERVKELIEEMSSMGLKPDTISYNY 283
Query: 419 LIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
L+ CERG L EA ++++ + APNA T+ LI C ++G I ++
Sbjct: 284 LMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMH 343
Query: 479 CLPNKST 485
+P+ +T
Sbjct: 344 KIPDFNT 350
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 152/342 (44%), Gaps = 14/342 (4%)
Query: 66 ISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLL---STLPRH 122
+ + DP +F+ A +R + + +L+ A +E LL TLP+
Sbjct: 45 LKSERDPEKLYNLFK-ANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLPQG 103
Query: 123 SPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQN 182
+ F+ V I YG AG AL TF ++ G + SV+ N
Sbjct: 104 RREGFI--------VRIIMLYGKAGMTKQALDTFFNMD-LYGCKRSVKSFNAALQVLSFN 154
Query: 183 KRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVS 242
++ +++G+ + VS NI +K+ C++ ++ A + EM GL P+VV+
Sbjct: 155 PDLHTIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVT 214
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
YTT++ + ++ KG P+ TT+ V + + R A ++ M
Sbjct: 215 YTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMP 274
Query: 303 ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVE 362
+ V+P+ +TY ++I+ + + P A + M KG+ P+ + ++ LC+ GN +
Sbjct: 275 KLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFD 334
Query: 363 RACEVWR-VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFE 403
A + + +RK + L+ L KKG++ +A+++ E
Sbjct: 335 LAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIME 376
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 105/257 (40%), Gaps = 14/257 (5%)
Query: 226 RVLDEMLGMGLVP---NVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK-GWAPDATTYTVL 281
+ LD M L +V S+ + ++ D+ L + K G DA ++ +
Sbjct: 124 QALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVSFNIA 183
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
+ FC G L A M +ME++G+ P+ VTY +I A K ++ L MV KG
Sbjct: 184 IKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMVLKGC 243
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLE---- 397
P+ + L A ++ ++ K+ +++ ++ KG L
Sbjct: 244 KPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMV----IKGFFLARFPD 299
Query: 398 -ARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLI 455
A V+ G G +L Y T+I LC+ G A + D + K PN T +L+
Sbjct: 300 MAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLL 359
Query: 456 NGFCKVGNAKEGIRILE 472
G K G + I+E
Sbjct: 360 KGLVKKGQLDQAKSIME 376
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%), Gaps = 8/220 (3%)
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G+ + T V+ C++ +LV K + + ++P+E+TY MI+ +C EA
Sbjct: 176 GYLYNVETMNRGVETLCKE-KLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEA 234
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD--NTVASTLIH 387
L M+ +G K+++ L ++ + A +V+ V+ G D +I
Sbjct: 235 AKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMID 294
Query: 388 WLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
WLCK G++ AR VF+E E G LT+ +LI GL + + EA L VE P
Sbjct: 295 WLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGL----VEGVENP 350
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ Y+ LI G K+ A E + +M + GC P TY
Sbjct: 351 DISIYHGLIKGLVKIKRASEATEVFRKMIQRGCEPIMHTY 390
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/283 (20%), Positives = 122/283 (43%), Gaps = 31/283 (10%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ P+ ++ +++ C V ++ A ++ + M+ G ++ + +M + D A
Sbjct: 211 IKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEAS 270
Query: 261 RVLGEVLDK-GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+V ++ K G D Y V++D C+ GR+ A KV D+M E GV + +T+ +I
Sbjct: 271 KVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYG 330
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD- 378
++ EA L+E + GL +V ++RA E V RK+
Sbjct: 331 LLVKRRVVEAYGLVEGVENPDISIYHGLIKGLV-------KIKRASEATEVFRKMIQRGC 383
Query: 379 ----NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTL-IAGLCERGELCEAA 433
+T L L ++G+ L+ ++T+ + G+ + G+ E
Sbjct: 384 EPIMHTYLMLLQGHLGRRGR-------------KGPDPLVNFDTIFVGGMIKAGKRLETT 430
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE 476
+ + +++G F Y+ ++ + +EG+ + EEM +
Sbjct: 431 KYIERTLKRGLEVPRFDYSKFLHYYSN----EEGVVMFEEMAK 469
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 83/180 (46%), Gaps = 2/180 (1%)
Query: 309 NEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW 368
N+ T+ ++++ ++ + VN M G++ + + V+ LC+E VE A V+
Sbjct: 145 NDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVF 204
Query: 369 RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFE-EFEGGSVASLLTYNTLIAGLCERG 427
L++ D T+I C G ++EA ++ + G + ++ L ++
Sbjct: 205 IKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKN 264
Query: 428 ELCEAARLWDDMVEK-GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ EA++++ MV K G + Y ++I+ CK G ++ +EM E G + T+
Sbjct: 265 QFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTW 324
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 144/328 (43%), Gaps = 20/328 (6%)
Query: 165 IRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVA 224
RP+V + KR+ + S+F+ + + PNVVS N ++ A C V+ A
Sbjct: 176 TRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEA 235
Query: 225 VRVLDEMLGMG-LVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVD 283
+ V +L P+ V+Y + G G + A +L E+L KG A D+T Y L+
Sbjct: 236 LEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSKGQAADSTVYNNLIR 295
Query: 284 GFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKG--- 340
G+ G A++ D+++ + + +E + + EA+ ++ K
Sbjct: 296 GYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRM 355
Query: 341 HVPSSGLCCKVVDVLCEEGNVERACEVWRVL------RKICGSDNTVASTLIHWLCKKGK 394
H P+ + +++V + G + A ++ + I ++ +++ K G+
Sbjct: 356 HPPTGNV---LLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGE 412
Query: 395 VLEARNVFEEFEGGSVAS------LLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
EA N F++ G V S L Y ++ CE+G L EA R + + V + +A
Sbjct: 413 FSEAINTFKKV-GSKVTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADA 471
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMCE 476
++ +I+ + K + +++L+ M +
Sbjct: 472 PSHRAMIDAYLKAERIDDAVKMLDRMVD 499
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 155/394 (39%), Gaps = 28/394 (7%)
Query: 98 AIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTA----IRGYGLAGKPDSAL 153
AI + RA+ + E SL Q F P V + I + G D AL
Sbjct: 185 AIIAAMYRAKRYSESISLF--------QYFFKQSNIVPNVVSYNQIINAHCDEGNVDEAL 236
Query: 154 RTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLK 213
+ I + PS VQ R A S+ + ++ G + + N L++
Sbjct: 237 EVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAASLLREMLSK-GQAADSTVYNNLIR 295
Query: 214 ALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAP 273
+ + + AV DE+ V + + T M + +G+ AM +LDK +
Sbjct: 296 GYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEKGNDKEAMESYRSLLDKKFRM 355
Query: 274 DATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN-----EVTYGVMIEAYCKWKKPGE 328
T VL++ F + G+ A + ++M +N PN T G+M+ K + E
Sbjct: 356 HPPTGNVLLEVFLKFGKKDEAWALFNEMLDNHAPPNILSVNSDTVGIMVNECFKMGEFSE 415
Query: 329 AVNLLEDMVRKGHVPSSGLC------CKVVDVLCEEGNVERACEVW-RVLRKICGSDNTV 381
A+N + + K V S C +V CE+G + A + + + +D
Sbjct: 416 AINTFKKVGSK--VTSKPFVMDYLGYCNIVTRFCEQGMLTEAERFFAEGVSRSLPADAPS 473
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAG-LCERGELCEAARLWDDMV 440
+I K ++ +A + + ++ + + + G L + G+L E+A + M
Sbjct: 474 HRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVADFGARVFGELIKNGKLTESAEVLTKMG 533
Query: 441 EKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
E+ P+ Y++++ G C + I+ EM
Sbjct: 534 EREPKPDPSIYDVVVRGLCDGDALDQAKDIVGEM 567
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 13/262 (4%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P+V N +L +LC+ E A ++E+ +G + V++ ++G + GD+ A+
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
L E++ KG+ PD +Y ++ G R+G ++D+M+ENG+ + T+ +M+ YCK
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCK 440
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA 382
++ EA ++ M G + +S KV D L E ++ + L++ DN
Sbjct: 441 ARQFEEAKRIVNKMFGYGLIEAS----KVEDPLSEAFSLVGFDPLAVRLKR----DNDST 492
Query: 383 STLIHWLCKKGKVLEARNVFEEFEGG-----SVASLLTYNTLIAGLCERGELCEAARLWD 437
+ + G L + +E + L +N+LI E G+L A RL D
Sbjct: 493 FSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLD 552
Query: 438 DMVEKGRAPNAFTYNLLINGFC 459
+M G+ + ++ +L+ C
Sbjct: 553 EMARWGQKLSRRSFAVLMRSLC 574
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 130/293 (44%), Gaps = 10/293 (3%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+S N++ + CK N VL M+ ++ +V SY + A
Sbjct: 833 GLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSA 892
Query: 260 MRVLGEVLDKGWAP--DATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
+ L E L G + Y +L+ R + KV+ +M+ GV P+E T+ ++
Sbjct: 893 IS-LKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLV 951
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI--- 374
Y ++ L M+ KG P++ V LC+ G+V++A ++W+V+
Sbjct: 952 HGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWN 1011
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAA 433
GS + V + ++ L KG++ +A + G +A Y+ +I L +RG L A
Sbjct: 1012 LGS-SVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAP--NYDNIIKKLSDRGNLDIAV 1068
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L + M++ P + +Y+ +ING + + + EM E G P+ ST+
Sbjct: 1069 HLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTW 1121
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 130/291 (44%), Gaps = 19/291 (6%)
Query: 207 SCNILLKALCK---VNEVEVAV----RVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
+C I+ L + V EVE+ + R D M+ G+ + ++G Y D A
Sbjct: 149 ACEIMASMLIREGMVKEVELLLMEMERHGDTMVNEGI------FCDLIGKYVDDFDSRKA 202
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEV---TYGVM 316
+ + + KG P + Y +L+D R R +A ++ D E + N + + G +
Sbjct: 203 VMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKV 262
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICG 376
IE C +K EA L +V G + +S + K+ E+ + E ++
Sbjct: 263 IELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKY--E 320
Query: 377 SDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARL 435
D V + ++H LC++ A EE E G +T+ LI C G++ A
Sbjct: 321 PDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLY 380
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+++ KG P+ ++YN +++G + G + IL+EM ENG + + ST+
Sbjct: 381 LSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTF 431
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 114/229 (49%), Gaps = 5/229 (2%)
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+VL E+ +G PD TT+ LV G+ ++++ + M G++PN + + +
Sbjct: 930 KVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSL 989
Query: 321 CKWKKPGEAVNLLEDMVRKG-HVPSSGLCCKVVDVLCEEGNVERACE-VWRVLRKICGSD 378
C +A++L + M KG ++ SS + K+V+ L +G + +A + + RV R +
Sbjct: 990 CDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMMAP 1049
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
N +I L +G + A ++ + S+ +Y+++I GL +L +A
Sbjct: 1050 NY--DNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHT 1107
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+MVE G +P+ T++ L++ FC+ E R+++ M G P++ +
Sbjct: 1108 EMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMF 1156
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 154/398 (38%), Gaps = 47/398 (11%)
Query: 77 QIFRHAQTHHRASSHHPLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPL 136
+IFR A ++ H P + L R E+E LL + RH + D +
Sbjct: 131 EIFRWASVQYQGFKHLPQACEIMASMLIREGMVKEVELLLMEMERHGDTMVNEGIFCDLI 190
Query: 137 VTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSV---FK 193
+ + + L ++R R G+ P V+ R A+ + +
Sbjct: 191 GKYVDDFD--SRKAVMLFDWMR---RKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWV 245
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
+R N+ S +++ LC +V+ A + +++ +G + N Y+ + GY +
Sbjct: 246 ETRAELN-HMNIDSIGKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEK 304
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
D + + +GEV + PD ++ CR+ A M+++E G + +EVT+
Sbjct: 305 QDFEDLLSFIGEV---KYEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTF 361
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
G++I C AV L +++ KG+ P DV
Sbjct: 362 GILIGWCCYEGDIKRAVLYLSEIMSKGYKP---------DVY------------------ 394
Query: 374 ICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEA 432
S N + S L +KG + +E E G + SL T+ ++ G C+ + EA
Sbjct: 395 ---SYNAILSGLF----RKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEA 447
Query: 433 ARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRI 470
R+ + M G + + L F VG +R+
Sbjct: 448 KRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRL 485
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 110/258 (42%), Gaps = 3/258 (1%)
Query: 220 EVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY-AWRGDMDGAMRVLGEVLDKGWAPDATTY 278
+++ A+R+LDEM G + S+ +M A R + ++ +L + + D T
Sbjct: 543 DLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQLDGETL 602
Query: 279 TVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVR 338
LV +C++G + + M + + VTY +I +CK + + +N+
Sbjct: 603 NFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAAQN 662
Query: 339 KGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLIHWLCKKGKVLE 397
+P C + + L +G VE +++ RV S + + L G
Sbjct: 663 DNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFSCI 722
Query: 398 ARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLIN 456
A +V + EG G + YN LI GLC + A + D+M++K P+ + +LI
Sbjct: 723 AHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIP 782
Query: 457 GFCKVGNAKEGIRILEEM 474
C+ A + E++
Sbjct: 783 RLCRANKAGTAFNLAEQI 800
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 77/153 (50%), Gaps = 7/153 (4%)
Query: 236 LVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAI 295
+ PN Y ++ + RG++D A+ +L +L P +++Y +++G R +L A+
Sbjct: 1047 MAPN---YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAM 1103
Query: 296 KVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVL 355
+M E G+ P+ T+ ++ +C+ + E+ L++ MV G PS + V+D
Sbjct: 1104 DFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVIDRF 1163
Query: 356 CEEGNVERACEVWRVLRKICGSDNTVASTLIHW 388
E N +A E+ +++K CG + + HW
Sbjct: 1164 RVEKNTVKASEMMEMMQK-CGYEVDFET---HW 1192
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 116/309 (37%), Gaps = 42/309 (13%)
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+C I ++ L + +A V+ + G G + Y ++ G A +L E+
Sbjct: 706 ACRIFVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEM 765
Query: 267 LDKGWAPDATTYTVLVDGFCR-----------------------------QGRLVAAIKV 297
LDK P + +L+ CR G+++ A
Sbjct: 766 LDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQIDSSYVHYALIKGLSLAGKMLDAENQ 825
Query: 298 MDDMEENGVQPNEVTYGVMIEAYCK---WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDV 354
+ M NG+ Y VM + YCK W K E + L MVRK + S + V
Sbjct: 826 LRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGL---MVRKNIICSVKSYREYVRK 882
Query: 355 LCEEGNVERACEVWRVLRKICGSDN----TVASTLIHWLCKKGKVLEARNVFEEFEG-GS 409
+C E A + L + G N + + LI ++ + LE V E +G G
Sbjct: 883 MCLEPQSLSAISLKEFL--LLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGV 940
Query: 410 VASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIR 469
+ T+N L+ G + + R M+ KG PN + + + C G+ K+ +
Sbjct: 941 LPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALD 1000
Query: 470 ILEEMCENG 478
+ + M G
Sbjct: 1001 LWQVMESKG 1009
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 131/280 (46%), Gaps = 11/280 (3%)
Query: 205 VVSCNILLKALCKV-NEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
V+ N+L+ + + N +EV +VL EM G G++P+ ++ ++ GY+ D ++R L
Sbjct: 909 VIIYNMLIFYMFRAKNHLEVN-KVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYL 967
Query: 264 GEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQ-PNEVTYGVMIEAYCK 322
++ KG P+ + + C G + A+ + ME G + V ++E
Sbjct: 968 SAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKGWNLGSSVVQTKIVETLIS 1027
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK---ICGSDN 379
+ +A + L + R G + + ++ L + GN++ A + + K I GS +
Sbjct: 1028 KGEIPKAEDFLTRVTRNGMMAPN--YDNIIKKLSDRGNLDIAVHLLNTMLKNQSIPGSSS 1085
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
++I+ L + ++ +A + E E G S+ T++ L+ CE ++ E+ RL
Sbjct: 1086 Y--DSVINGLLRYNQLDKAMDFHTEMVELGLSPSISTWSGLVHKFCEACQVLESERLIKS 1143
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
MV G +P+ + +I+ F N + ++E M + G
Sbjct: 1144 MVGLGESPSQEMFKTVIDRFRVEKNTVKASEMMEMMQKCG 1183
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/352 (19%), Positives = 127/352 (36%), Gaps = 77/352 (21%)
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+ N L++ CK + + +M+ M + V+YT+++ + + ++ + V G
Sbjct: 601 TLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVWGAA 660
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIK------------------------------ 296
+ W PD L + R+G + ++
Sbjct: 661 QNDNWLPDLNDCGDLWNCLVRKGLVEEVVQLFERVFISYPLSQSEACRIFVEKLTVLGFS 720
Query: 297 -----VMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKV 351
V+ +E G + Y +I+ C KK A +L++M+ K H+PS G C +
Sbjct: 721 CIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLML 780
Query: 352 VDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA 411
+ LC +A + + +I S V LI L GK+L+A N ++
Sbjct: 781 IPRLCR---ANKAGTAFNLAEQIDSS--YVHYALIKGLSLAGKMLDAENQLRIMLSNGLS 835
Query: 412 SL-LTYNTLIAGLCERGELCEAARLWDDMVEKG----------------RAPNAFT---- 450
S YN + G C+ + + MV K P + +
Sbjct: 836 SYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSYREYVRKMCLEPQSLSAISL 895
Query: 451 ----------------YNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
YN+LI + N E ++L EM G LP+++T+
Sbjct: 896 KEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTF 947
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 100/227 (44%), Gaps = 4/227 (1%)
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
GA ++ ++ KG PD TY +LV+G+C G++ A + +D+M G P ++I
Sbjct: 200 GAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLI 259
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI--C 375
E A ++ M + G VP +++ + + G VE E++ K+ C
Sbjct: 260 EGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLC 319
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAAR 434
+T TLI + K GK+ EA + E G Y +I G+C G +A
Sbjct: 320 VDIDTY-KTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFS 378
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLP 481
+ DM K PN Y +LI + G + L EM E G +P
Sbjct: 379 FFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVP 425
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 153/365 (41%), Gaps = 13/365 (3%)
Query: 75 SLQIFRHAQTHHRASSHHP--LPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCG 132
SL+ F A+++ S+ P + Y + L+ + + M +L + S LD G
Sbjct: 94 SLRFFNWARSN---PSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLS----LDISG 146
Query: 133 EDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVF 192
E L I YG G D A+ F + LG + +V K A+++
Sbjct: 147 E-TLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALI 205
Query: 193 KNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
+ R G+ P+ + IL+ C +++ A LDEM G P ++ G
Sbjct: 206 RR-MIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLN 264
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
G ++ A ++ ++ G+ PD T+ +L++ + G + I++ + G+ + T
Sbjct: 265 AGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDT 324
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR 372
Y +I A K K EA LL + V GH P L ++ +C G + A + ++
Sbjct: 325 YKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMK 384
Query: 373 KICGSDNTVASTLIHWLC-KKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELC 430
N T++ +C + GK ++A N E E G V ++ + GL G+
Sbjct: 385 VKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHD 444
Query: 431 EAARL 435
A R+
Sbjct: 445 LAMRI 449
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 126/298 (42%), Gaps = 3/298 (1%)
Query: 192 FKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA 251
F +R+ +P + L K+L + E ++L +M + L + + ++ Y
Sbjct: 98 FNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYG 157
Query: 252 WRGDMDGAMRVLGEVLDK-GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
G +D A+ + V G Y L+ C A ++ M G++P++
Sbjct: 158 KNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDK 217
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE-VWR 369
TY +++ +C K EA L++M R+G P + +++ L G +E A E V +
Sbjct: 218 RTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSK 277
Query: 370 VLRKICGSDNTVASTLIHWLCKKGKV-LEARNVFEEFEGGSVASLLTYNTLIAGLCERGE 428
+ + D + LI + K G+V + + G + TY TLI + + G+
Sbjct: 278 MTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGK 337
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ EA RL ++ VE G P Y +I G C+ G + +M PN+ Y
Sbjct: 338 IDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVY 395
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 225 VRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDG 284
+ + EM GLV N V+YTT++ G GD D A + E++ G PD TY +L+DG
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 285 FCRQGRLVAAI---KVMD------DMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLED 335
C+ G+L A+ KV D + GV+PN VTY MI +CK EA L
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 336 MVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR 372
M G +P SG ++ +G+ + E+ + +R
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMR 157
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 80/156 (51%), Gaps = 12/156 (7%)
Query: 191 VFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY 250
+F+ R G+ N V+ L++ L + + ++A + EM+ G+ P++++Y ++ G
Sbjct: 3 LFREMSQR-GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 251 AWRGDMDGAMRVLGEVLD----------KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD 300
G ++ A+ V G+V D KG P+ TYT ++ GFC++G A +
Sbjct: 62 CKNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDM 336
M+E+G P+ TY +I A+ + + L+++M
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 10/141 (7%)
Query: 187 LAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVE---VAVRVLD------EMLGMGLV 237
+A +FK + GV P++++ NILL LCK ++E VA +V D + G+
Sbjct: 34 MAQEIFKEMVSD-GVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVK 92
Query: 238 PNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKV 297
PNVV+YTT++ G+ +G + A + ++ + G PD+ TY L+ R G A+ ++
Sbjct: 93 PNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 152
Query: 298 MDDMEENGVQPNEVTYGVMIE 318
+ +M + TYG++ +
Sbjct: 153 IKEMRSCRFAGDASTYGLVTD 173
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 26/193 (13%)
Query: 295 IKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDV 354
+++ +M + G+ N VTY +I+ + A + ++MV G P ++D
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 355 LCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASL 413
LC+ G +E+A VA GKV + ++F G ++
Sbjct: 61 LCKNGKLEKAL---------------VA----------GKVEDGWDLFCSLSLKGVKPNV 95
Query: 414 LTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEE 473
+TY T+I+G C++G EA L+ M E G P++ TYN LI + G+ +++E
Sbjct: 96 VTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 155
Query: 474 MCENGCLPNKSTY 486
M + STY
Sbjct: 156 MRSCRFAGDASTY 168
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 153/350 (43%), Gaps = 47/350 (13%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T + GY G AL F + R GI+ + V++++ +L
Sbjct: 149 TMVIGYAQDGNLHEAL-WFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLV 207
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+S V+SC+I+ A K ++E A R DEM V ++ +TT++ GYA GDM+
Sbjct: 208 AGFLSNVVLSCSII-DAYAKCGQMESAKRCFDEMT----VKDIHIWTTLISGYAKLGDME 262
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ E+ +K + ++T L+ G+ RQG A+ + M GV+P + T+ +
Sbjct: 263 AAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCL 318
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
A + M+R P++ + ++D+ + G++E + V+R IC
Sbjct: 319 CASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFR----ICDD 374
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ VF +NT+I+ L + G +A R+ D
Sbjct: 375 KHDC-------------------VF-------------WNTMISALAQHGLGHKALRMLD 402
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMC-ENGCLPNKSTY 486
DM++ PN T +++N G +EG+R E M ++G +P++ Y
Sbjct: 403 DMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHY 452
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 5/236 (2%)
Query: 255 DMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYG 314
D + E+ +G T+ +++ + R G AI+ +M++ G+ P+ T+
Sbjct: 693 DFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFK 752
Query: 315 VMIEAYC--KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR 372
+I C K + EA +M+R G VP L + LCE GN + A L
Sbjct: 753 CLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLG 812
Query: 373 KICGSDNTVA-STLIHWLCKKGKVLEARNVFEEFEGG-SVASLLTYNTLIAGLCERGELC 430
KI G TVA S I LC+ GK+ EA + FEG S+ TY +++ GL +RG+L
Sbjct: 813 KI-GFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQ 871
Query: 431 EAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+A + M E G P Y LI F K ++ + ++M C P+ TY
Sbjct: 872 KALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTY 927
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 128/265 (48%), Gaps = 7/265 (2%)
Query: 223 VAVRVLDEMLGMGLVPNVVSYT---TVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYT 279
+A+R EM MGL+P+ ++ TV+ R +++ A R E++ G+ PD
Sbjct: 731 IAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGR-NVEEATRTFREMIRSGFVPDRELVQ 789
Query: 280 VLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRK 339
+ C G A +D + + G P V Y + I A C+ K EA++ L +
Sbjct: 790 DYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGE 848
Query: 340 GHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT-VASTLIHWLCKKGKVLEA 398
+ +V L + G++++A + +++I V ++LI + K+ ++ +
Sbjct: 849 RSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKV 908
Query: 399 RNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
++ EG S S++TY +I G G++ EA + +M E+G +P+ TY+ IN
Sbjct: 909 LETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINC 968
Query: 458 FCKVGNAKEGIRILEEMCENGCLPN 482
C+ +++ +++L EM + G P+
Sbjct: 969 LCQACKSEDALKLLSEMLDKGIAPS 993
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 134/298 (44%), Gaps = 3/298 (1%)
Query: 187 LAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTV 246
LA F + + G S V N +L + +++ ++ EM G ++ ++T +
Sbjct: 171 LAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTIL 230
Query: 247 MGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
+ Y + + V ++ G+ DAT Y +++ C GR A++ +M E G+
Sbjct: 231 ISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGI 290
Query: 307 QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE 366
TY ++++ K +K ++ +DMVR + ++ C G ++ A E
Sbjct: 291 TFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALE 350
Query: 367 VWRVL--RKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLC 424
+ R L +++C D L+ LC+ ++++A + + + + Y +I+G
Sbjct: 351 LIRELKNKEMC-LDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYL 409
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
+ ++ +A ++ + + GR P TY ++ K+ ++G + EM ENG P+
Sbjct: 410 RQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPD 467
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/434 (19%), Positives = 174/434 (40%), Gaps = 49/434 (11%)
Query: 45 TIQPPIKPWPHRLHPKLLASLISRQHD-PHLSLQIFRHAQTHHRASSHHPLPYRAIFLKL 103
+++ ++ R P+++ +++ R PHL+++ F + SH Y +
Sbjct: 141 SMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVK-QKDGFSHRVGIYNTMLSIA 199
Query: 104 SRARCFPEMESLLSTLPRHSPQQFLDHCGED--PLVTAIRGYGLAGKPDSALRTFLRIES 161
AR ++ L+S + ++ C +D I YG A K L F ++
Sbjct: 200 GEARNLDMVDELVSEMEKNG-------CDKDIRTWTILISVYGKAKKIGKGLLVFEKMR- 251
Query: 162 RLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEV 221
+ G R LA +K + G++ + + +LL + K +V
Sbjct: 252 KSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEK-GITFGLRTYKMLLDCIAKSEKV 310
Query: 222 EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVL 281
+V + D+M+ + + ++ ++ + G + A+ ++ E+ +K DA + +L
Sbjct: 311 DVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEIL 370
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
V G CR R+V A++++D M+ + + V YG++I Y + +A+ E + + G
Sbjct: 371 VKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKSGR 429
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNV 401
P +++ L + E+ C N+
Sbjct: 430 PPRVSTYTEIMQHLFKLKQFEKGC----------------------------------NL 455
Query: 402 FEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCK 460
F E E G + ++AG + + EA +++ M EKG P +Y++ + C+
Sbjct: 456 FNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCR 515
Query: 461 VGNAKEGIRILEEM 474
E I+I +M
Sbjct: 516 SSRYDEIIKIFNQM 529
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 152/414 (36%), Gaps = 64/414 (15%)
Query: 69 QHDPHLSLQIFRHAQTHHRA-------------SSHHPLPYRAIFLKLSRARCFPEMESL 115
Q P L +++ RHA+ A H+ Y + F +M SL
Sbjct: 641 QFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSL 700
Query: 116 LSTLPRHSPQQFLDHC--GEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXX 173
+ R C +D I YG G + A+RTF ++ +G+ PS
Sbjct: 701 FYEMRRQG-------CLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKD-MGLIPS----- 747
Query: 174 XXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALC--KVNEVEVAVRVLDEM 231
S FK L+ LC K VE A R EM
Sbjct: 748 ---------------SSTFK----------------CLITVLCEKKGRNVEEATRTFREM 776
Query: 232 LGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRL 291
+ G VP+ +G G+ A L + G+ P Y++ + CR G+L
Sbjct: 777 IRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-PVTVAYSIYIRALCRIGKL 835
Query: 292 VAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKV 351
A+ + E ++ TYG ++ + +A++ + M G P + +
Sbjct: 836 EEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSL 895
Query: 352 VDVLCEEGNVERACEVWRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG-GS 409
+ +E +E+ E + + + C + +I GKV EA N F E G+
Sbjct: 896 IVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGT 955
Query: 410 VASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGN 463
TY+ I LC+ + +A +L +M++KG AP+ + + G + G
Sbjct: 956 SPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 78/180 (43%), Gaps = 4/180 (2%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
IL+K LC+ N + A+ ++D M L + V Y ++ GY + D+ A+ +
Sbjct: 369 ILVKGLCRANRMVDALEIVDIMKRRKLDDSNV-YGIIISGYLRQNDVSKALEQFEVIKKS 427
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G P +TYT ++ + + + ++M ENG++P+ V ++ + + EA
Sbjct: 428 GRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEA 487
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWL 389
+ M KG P+ V LC R E+ ++ ++ S + + W+
Sbjct: 488 WKVFSSMEEKGIKPTWKSYSIFVKELCRSS---RYDEIIKIFNQMHASKIVIRDDIFSWV 544
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 70/142 (49%), Gaps = 1/142 (0%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P V + +++ L K+ + E + +EM+ G+ P+ V+ T V+ G+ + + A
Sbjct: 428 GRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEA 487
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+V + +KG P +Y++ V CR R IK+ + M + + + + +I +
Sbjct: 488 WKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISS 547
Query: 320 YCKWKKPGEAVNLLEDMVRKGH 341
K E ++L++++ ++ +
Sbjct: 548 MEK-NGEKEKIHLIKEIQKRSN 568
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 108/204 (52%), Gaps = 6/204 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P+ ++ + L+ LCK +E A VLD+M G P++ ++T ++ G+ ++D A
Sbjct: 400 GYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKA 459
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLV-AAIKVMDDMEENGVQPNEVTYGVMIE 318
+ +L+KG+ D+ VL+DGF + A+I +M+ ++ V+P + TY ++I+
Sbjct: 460 LACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLID 519
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVD-VLCEEGNVERACEVWRVLRKICGS 377
K KK EA++LL+ M++K + P+ + D L + G +E A + VL
Sbjct: 520 KLLKIKKSEEALDLLQ-MMKKQNYPA---YAEAFDGYLAKFGTLEDAKKFLDVLSSKDSP 575
Query: 378 DNTVASTLIHWLCKKGKVLEARNV 401
+I ++G++ +A+N+
Sbjct: 576 SFAAYFHVIEAFYREGRLTDAKNL 599
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
V+ E+ G+ D TY + F + + +K+ + M + +P+ +++
Sbjct: 285 VVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLS 344
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVD----VLCEEGNVERACEVWRVLRKICGS 377
P ++L+ + RK L V D L G + A E+ + +R
Sbjct: 345 G--SPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYE 402
Query: 378 -DNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARL 435
DN S L+ LCK ++ EAR V ++ E G + T+ LI G C+ EL +A
Sbjct: 403 PDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALAC 462
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRI-LEEMCENGCL-PNKSTY 486
+ +M+EKG ++ ++LI+GF + N EG I L EM +N + P +STY
Sbjct: 463 FANMLEKGFDIDSNLLDVLIDGFV-IHNKFEGASIFLMEMVKNANVKPWQSTY 514
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 113/273 (41%), Gaps = 7/273 (2%)
Query: 203 PNVVSCNILLKALCKVN--EVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
P++ C++LL+ L ++++ RV + G + Y + G D A
Sbjct: 331 PSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAE 390
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+ + + G+ PD TY+ LV G C+ RL A V+D ME G P+ T+ ++I+ +
Sbjct: 391 EITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGH 450
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD-- 378
CK + +A+ +M+ KG S L ++D E A + K
Sbjct: 451 CKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPW 510
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+ LI L K K EA ++ + + + + Y G + E A+ + D
Sbjct: 511 QSTYKLLIDKLLKIKKSEEALDLLQMMKKQNYPA---YAEAFDGYLAKFGTLEDAKKFLD 567
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRIL 471
++ +P+ Y +I F + G + +L
Sbjct: 568 VLSSKDSPSFAAYFHVIEAFYREGRLTDAKNLL 600
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 87/207 (42%), Gaps = 6/207 (2%)
Query: 277 TYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDM 336
TY + R + V+D+M+ G + TY + + K + E V L E M
Sbjct: 265 TYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYM 324
Query: 337 VRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTL---IH-WLCKK 392
+ PS C ++ L N + V+RV RK + +++ + IH L
Sbjct: 325 MDGPFKPSIQDCSLLLRYLSGSPNPDLDL-VFRVSRKYESTGKSLSKAVYDGIHRSLTSV 383
Query: 393 GKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTY 451
G+ EA + + G +TY+ L+ GLC+ L EA + D M +G P+ T+
Sbjct: 384 GRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTW 443
Query: 452 NLLINGFCKVGNAKEGIRILEEMCENG 478
+LI G CK + + M E G
Sbjct: 444 TILIQGHCKNNELDKALACFANMLEKG 470
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 170/395 (43%), Gaps = 18/395 (4%)
Query: 96 YRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRT 155
Y ++ L + R F +L+ + + SP L+ IR Y A+ T
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFSPSL----VNSQTLLIMIRKYCAVHDVGKAINT 219
Query: 156 FLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLA-HSVFKNSRTRFGVSPNVVSCNILLKA 214
F R + + + K A H +F N + ++ S NI+L
Sbjct: 220 F-HAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCN-KDKYPFDAK--SFNIVLNG 275
Query: 215 LCKV-NEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAP 273
C V A RV EM +G+ +VVSY++++ Y+ G ++ +++ + + P
Sbjct: 276 WCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEP 335
Query: 274 DATTYTVLVDGFCRQGRLVAAIKVMDDMEE-NGVQPNEVTYGVMIEAYCKWKKPGEAVNL 332
D Y +V + + A +M MEE G++PN VTY +I+ CK +K EA +
Sbjct: 336 DRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQV 395
Query: 333 LEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAS--TLIHWLC 390
++M+ KG P+ + +L E E+ +RK+ G + TV + LI LC
Sbjct: 396 FDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKM-GCEPTVETYIMLIRKLC 451
Query: 391 KKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAF 449
+ +++E + +V L +Y +I GL G++ EA + +M +KG PN
Sbjct: 452 RWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNEN 511
Query: 450 TYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKS 484
+++ + F A++ I + G + KS
Sbjct: 512 VEDMIQSWFSGKQYAEQRITDSKGEVNKGAIVKKS 546
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 132/292 (45%), Gaps = 11/292 (3%)
Query: 202 SPNVVSCN---ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
SP++V+ I+++ C V++V A+ L + + +++ ++
Sbjct: 191 SPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSD 250
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQ-GRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A ++ DK + DA ++ ++++G+C G A +V +M GV+ + V+Y MI
Sbjct: 251 AGHLIFCNKDK-YPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMI 309
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
Y K + + L + M ++ P + VV L + V A + + + + G
Sbjct: 310 SCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGI 369
Query: 378 DNTVAS--TLIHWLCKKGKVLEARNVFEE-FEGGSVASLLTYNTLIAGLCERGELCEAAR 434
+ V + +LI LCK K EA+ VF+E E G ++ TY+ + L GE E
Sbjct: 370 EPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTGE--EVFE 426
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L M + G P TY +LI C+ + + + +EM E P+ S+Y
Sbjct: 427 LLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSY 478
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 113/280 (40%), Gaps = 5/280 (1%)
Query: 94 LPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSAL 153
L ++++ + L + F E L + + F G D +R + + A
Sbjct: 137 LSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTEREMKEAR 196
Query: 154 RTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLK 213
F ++ SR P V+ + A +F + + G PN V+ I +
Sbjct: 197 SIFEKLHSRFN--PDVKTMNILLLG-FKEAGDVTATELFYHEMVKRGFKPNSVTYGIRID 253
Query: 214 ALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAP 273
CK A+R+ ++M + V TT++ G + A ++ E+ +G P
Sbjct: 254 GFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTP 313
Query: 274 DATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG--EAVN 331
D Y L+ + G + AIKVM +MEE G++P+ VT+ M K K+ G
Sbjct: 314 DCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCE 373
Query: 332 LLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL 371
+ M + VP + ++ + C G V ++W+ +
Sbjct: 374 YYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYM 413
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 123/322 (38%), Gaps = 49/322 (15%)
Query: 203 PNVVSCNILLKALCKVNE-------VEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
PN++S + LCK+ + +E V++ E+ V + ++ + +
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEIFRKKF--GVDEFNILLRAFCTERE 191
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
M A R + E L + PD T +L+ GF G + A +M + G +PN VTYG+
Sbjct: 192 MKEA-RSIFEKLHSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGI 250
Query: 316 MIEAYCKWKKPGEAVNLLEDMVR-----------------------------------KG 340
I+ +CK + GEA+ L EDM R +G
Sbjct: 251 RIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRG 310
Query: 341 HVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARN 400
P G ++ L + G+V A +V + + + ++V + K K
Sbjct: 311 LTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNG 370
Query: 401 VFEEFEGGSVASLL----TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLIN 456
V E ++ SL+ T L+ C GE+ LW M+EKG P+ LL
Sbjct: 371 VCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTT 430
Query: 457 GFCKVGNAKEGIRILEEMCENG 478
C A + + E G
Sbjct: 431 ALCARRRANDAFECSWQTVERG 452
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/263 (20%), Positives = 112/263 (42%), Gaps = 57/263 (21%)
Query: 238 PNVVSYTTV---------MGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQ 288
PN++S+ ++ G Y ++ +++ E+ K + D + +L+ FC +
Sbjct: 134 PNLLSFKSMSILLCKIAKFGSY--EETLEAFVKMEKEIFRKKFGVDE--FNILLRAFCTE 189
Query: 289 GRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVN---LLEDMVRKGHVPSS 345
+ A + + + P+ T +++ + K+ G+ +MV++G P+S
Sbjct: 190 REMKEARSIFEKLHSR-FNPDVKTMNILLLGF---KEAGDVTATELFYHEMVKRGFKPNS 245
Query: 346 GLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA--STLIHWLCKKGKVLEARNVFE 403
+D C++ N A ++ + ++ D TV +TLIH
Sbjct: 246 VTYGIRIDGFCKKRNFGEALRLFEDMDRL-DFDITVQILTTLIH---------------- 288
Query: 404 EFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGN 463
G VA R ++ +A +L+D++ ++G P+ YN L++ K G+
Sbjct: 289 ---GSGVA--------------RNKI-KARQLFDEISKRGLTPDCGAYNALMSSLMKCGD 330
Query: 464 AKEGIRILEEMCENGCLPNKSTY 486
I++++EM E G P+ T+
Sbjct: 331 VSGAIKVMKEMEEKGIEPDSVTF 353
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 3/159 (1%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A +F R G++P+ + N L+ +L K +V A++V+ EM G+ P+ V++ ++
Sbjct: 299 ARQLFDEISKR-GLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMF 357
Query: 248 GGYAWRGDM--DGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
G + +G ++ ++ P T +L+ FC G + + + M E G
Sbjct: 358 IGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKG 417
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS 344
P+ ++ A C ++ +A V +G S
Sbjct: 418 YCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVS 456
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 109/247 (44%), Gaps = 36/247 (14%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV+ ++ S +I + +CK + AV++ EM + +VV+Y TV+ ++
Sbjct: 219 GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+RV E+ ++G P+ T+ ++ C GR+ A +++D+M + G QP+ +TY +
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCL--- 335
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+ + +KP E ++L M+R G P ++ G ++ VW+ ++
Sbjct: 336 FSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMK------- 388
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDM 439
E G YN +I L ++G L A ++M
Sbjct: 389 --------------------------ESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEM 422
Query: 440 VEKGRAP 446
+E+G +P
Sbjct: 423 IERGLSP 429
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 10/293 (3%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLG-MGLVPNVVSYTTVMGGYAWRGDMDG 258
G + N ++ L K E E++ +++ M+G VPN V++ V Y +
Sbjct: 76 GFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQE 135
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVM--DDMEENGVQ-PNEVTYGV 315
A+ + LD D T++ LVD C +V A ++ ++ NG N + +
Sbjct: 136 AIDAYDK-LDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNL 194
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKIC 375
++ + K G+ + M +G +D++C+ G +A ++++ ++
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 376 GSDNTVA-STLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAA 433
+ VA +T+I + V VF E E G ++ T+NT+I LCE G + +A
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 314
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
R+ D+M ++G P++ TY L F ++ E + + M +G P TY
Sbjct: 315 RMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDTY 364
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 119/281 (42%), Gaps = 14/281 (4%)
Query: 211 LLKALCKVNEVEVAVRVL--DEMLGMGL-VPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL 267
L+ ALC+ V A + ++G G V N + ++ G++ G ++
Sbjct: 157 LVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMD 216
Query: 268 DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG 327
+G D +Y++ +D C+ G+ A+K+ +M+ ++ + V Y +I A +
Sbjct: 217 TEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVE 276
Query: 328 EAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI----CGSDNTVAS 383
+ + +M +G P+ ++ +LCE+G R + +R+L ++ C D+
Sbjct: 277 FGIRVFREMRERGCEPNVATHNTIIKLLCEDG---RMRDAYRMLDEMPKRGCQPDSITYM 333
Query: 384 TLIHWLCKKGKVLEARNVF-EEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEK 442
L L K ++L ++F G + TY L+ G L +W M E
Sbjct: 334 CLFSRLEKPSEIL---SLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKES 390
Query: 443 GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNK 483
G P++ YN +I+ + G EEM E G P +
Sbjct: 391 GDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRR 431
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 74/171 (43%), Gaps = 5/171 (2%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T IR G + + +R F + R G P+V ++ R R A+ +
Sbjct: 264 TVIRAIGASQGVEFGIRVFREMRER-GCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPK 322
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
R G P+ ++ L L K +E+ + + M+ G+ P + +Y +M + G +
Sbjct: 323 R-GCQPDSITYMCLFSRLEKPSEI---LSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQ 378
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQP 308
+ V + + G PD+ Y ++D ++G L A + ++M E G+ P
Sbjct: 379 PVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 140/324 (43%), Gaps = 42/324 (12%)
Query: 162 RLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEV 221
RLG+ +V +N + L+ VF + + R N+ S N +L + K+ V
Sbjct: 117 RLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR-----NLSSWNSILSSYTKLGYV 171
Query: 222 EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVL 281
+ A+ +LDEM GL P++V++ +++ GYA +G A+ VL + G P ++ + L
Sbjct: 172 DDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSL 231
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
+ G L + + N++ Y V +E L++ ++ G+
Sbjct: 232 LQAVAEPGHLKLGKAI-----HGYILRNQLWYDVYVE-----------TTLIDMYIKTGY 275
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNV 401
+P + + ++D + I ++ V+ L K + L R
Sbjct: 276 LPYARMVFDMMDA-----------------KNIVAWNSLVSGLSYACLLKDAEALMIRME 318
Query: 402 FEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKV 461
E G +T+N+L +G G+ +A + M EKG APN ++ + +G K
Sbjct: 319 KE----GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKN 374
Query: 462 GNAKEGIRILEEMCENGCLPNKST 485
GN + +++ +M E G PN +T
Sbjct: 375 GNFRNALKVFIKMQEEGVGPNAAT 398
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 118/273 (43%), Gaps = 37/273 (13%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
+ N+V+ N L+ L ++ A ++ M G+ P+ +++ ++ GYA G + A+
Sbjct: 288 AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALD 347
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
V+G++ +KG AP+ ++T + G + G A+KV M+E GV PN T +++
Sbjct: 348 VIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKI-- 405
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTV 381
L C + +L V C LRK D V
Sbjct: 406 -------------------------LGC--LSLLHSGKEVHGFC-----LRKNLICDAYV 433
Query: 382 ASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
A+ L+ K G + A +F + S+AS +N ++ G G E + M+E
Sbjct: 434 ATALVDMYGKSGDLQSAIEIFWGIKNKSLAS---WNCMLMGYAMFGRGEEGIAAFSVMLE 490
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
G P+A T+ +++ G +EG + + M
Sbjct: 491 AGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLM 523
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 33/237 (13%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ P+ ++ N L + + E A+ V+ +M G+ PNVVS+T + G + G+ A
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 260 MRVLGEVLDKGWAPDATTYTVL---------------VDGFCRQGRLV----AAIKVMDD 300
++V ++ ++G P+A T + L V GFC + L+ A ++D
Sbjct: 381 LKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDM 440
Query: 301 MEENGVQPN--EVTYGV----------MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLC 348
++G + E+ +G+ M+ Y + + E + M+ G P +
Sbjct: 441 YGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITF 500
Query: 349 CKVVDVLCEEGNVERACEVWRVLRKICGSDNTV--ASTLIHWLCKKGKVLEARNVFE 403
V+ V G V+ + + ++R G T+ S ++ L + G + EA + +
Sbjct: 501 TSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQ 557
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 289 GRLVA---AIKVMDDM-EENGVQPNEVTYGVMIEAYC-KWKKPGEAVNLLEDMVRKGHVP 343
GR V+ A K+ D+M + + + NE+ VM+ W+K AV L +M G
Sbjct: 34 GRCVSLGFANKLFDEMPKRDDLAWNEI---VMVNLRSGNWEK---AVELFREMQFSGAKA 87
Query: 344 SSGLCCKVVDVLC-EEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVF 402
K++ V +EG E VLR S+ ++ ++LI + GK+ +R VF
Sbjct: 88 YDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVF 147
Query: 403 EEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
+ +++S +N++++ + G + +A L D+M G P+ T+N L++G+ G
Sbjct: 148 NSMKDRNLSS---WNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKG 204
Query: 463 NAKEGIRILEEMCENGCLPNKST 485
+K+ I +L+ M G P+ S+
Sbjct: 205 LSKDAIAVLKRMQIAGLKPSTSS 227
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 139/310 (44%), Gaps = 23/310 (7%)
Query: 190 SVFKNSRTRFGVSPNVVSCNILLKALC----KVNEVEVAVRVLDEMLGMGLV-PNVVSYT 244
S KNS G P+ N L+ A K +E LD+M G+ PNVV+Y
Sbjct: 157 SEMKNS----GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYN 212
Query: 245 TVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN 304
++ +A G +D + ++ +PD T+ ++D + + G + V+ M N
Sbjct: 213 ILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN 272
Query: 305 GVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
+P+ +T+ V+I++Y K ++ + + ++R P+ ++ + +++A
Sbjct: 273 ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA 332
Query: 365 CEVWRVLRKICGSDNTVASTLIHWLCKK------GKVLEARNVFEEF-EGGSVASLLTYN 417
V++ + +D + I + C G V AR +FEE E V T N
Sbjct: 333 EWVFKKM-----NDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLN 387
Query: 418 TLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRIL-EEMCE 476
++ C G EA +L+ + P+A TY L + K + KE ++IL ++M +
Sbjct: 388 AMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK-ADMKEQVQILMKKMEK 446
Query: 477 NGCLPNKSTY 486
+G +PNK +
Sbjct: 447 DGIVPNKRFF 456
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P + + N ++ K ++ A V +M M +P+ ++Y ++ Y + G + A +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
EV + A+T +++ +CR G + A K+ + V P+ TY + +AY K
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVL 355
+ L++ M + G VP+ + ++V
Sbjct: 431 ADMKEQVQILMKKMEKDGIVPNKRFFLEALEVF 463
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 78/153 (50%), Gaps = 7/153 (4%)
Query: 341 HVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLI--HWLCK-KGKVL 396
++P +G+ K++ V+ ++G A ++ ++ C D +V + LI H + K K L
Sbjct: 129 YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 397 E-ARNVFEEFEGGS--VASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNL 453
E R ++ +G +++TYN L+ + G++ + L+ D+ +P+ +T+N
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 454 LINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+++ + K G KE +L M N C P+ T+
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 139/310 (44%), Gaps = 23/310 (7%)
Query: 190 SVFKNSRTRFGVSPNVVSCNILLKALC----KVNEVEVAVRVLDEMLGMGLV-PNVVSYT 244
S KNS G P+ N L+ A K +E LD+M G+ PNVV+Y
Sbjct: 157 SEMKNS----GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYN 212
Query: 245 TVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN 304
++ +A G +D + ++ +PD T+ ++D + + G + V+ M N
Sbjct: 213 ILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSN 272
Query: 305 GVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
+P+ +T+ V+I++Y K ++ + + ++R P+ ++ + +++A
Sbjct: 273 ECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKA 332
Query: 365 CEVWRVLRKICGSDNTVASTLIHWLCKK------GKVLEARNVFEEF-EGGSVASLLTYN 417
V++ + +D + I + C G V AR +FEE E V T N
Sbjct: 333 EWVFKKM-----NDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLN 387
Query: 418 TLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRIL-EEMCE 476
++ C G EA +L+ + P+A TY L + K + KE ++IL ++M +
Sbjct: 388 AMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK-ADMKEQVQILMKKMEK 446
Query: 477 NGCLPNKSTY 486
+G +PNK +
Sbjct: 447 DGIVPNKRFF 456
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 70/153 (45%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P + + N ++ K ++ A V +M M +P+ ++Y ++ Y + G + A +
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
EV + A+T +++ +CR G + A K+ + V P+ TY + +AY K
Sbjct: 371 FEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTK 430
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVL 355
+ L++ M + G VP+ + ++V
Sbjct: 431 ADMKEQVQILMKKMEKDGIVPNKRFFLEALEVF 463
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 80/156 (51%), Gaps = 7/156 (4%)
Query: 338 RKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLI--HWLCK-KG 393
++ ++P +G+ K++ V+ ++G A ++ ++ C D +V + LI H + K
Sbjct: 126 QRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKA 185
Query: 394 KVLE-ARNVFEEFEGGS--VASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFT 450
K LE R ++ +G +++TYN L+ + G++ + L+ D+ +P+ +T
Sbjct: 186 KALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYT 245
Query: 451 YNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+N +++ + K G KE +L M N C P+ T+
Sbjct: 246 FNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 222 EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVL 281
E + + +M GL+PN V+ ++ G G + AM++ G + DKG P+ YT +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
V+ FC+ ++ A ++ M+ NG+ PN +YGV+++ +AV +M+ GH
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
P+ ++VD LC VE+A L +
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQ 264
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ PN V+ +L LCK V+ A+++ M G +P VV YT V+ + ++ A
Sbjct: 129 GLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
R+ ++ + G AP+A +Y VLV G L A+ +M E+G PN T+ +++A
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDA 245
Query: 320 YCKWKKPGEAVNLLEDMVRKG 340
C+ K +A + ++ + +KG
Sbjct: 246 LCRVKGVEQAQSAIDTLNQKG 266
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 362 ERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLI 420
E + E+++ +++ N VA ++ LCK G V EA +F + G++ ++ Y ++
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA--MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 421 AGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL 480
C+ ++ +A R++ M G APNAF+Y +L+ G + + EM E+G
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 481 PNKSTY 486
PN T+
Sbjct: 234 PNVPTF 239
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P VV +++A CK +++E A R+ +M G+ PN SY ++ G +D A
Sbjct: 161 GTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDA 220
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
+ E+L+ G +P+ T+ LVD CR + A +D + + G N
Sbjct: 221 VAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 326 PGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICGSDNTVAST 384
P ++ + + M G +P++ ++D LC++G V+ A +++ ++R K + + +
Sbjct: 115 PEDSDEIFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 385 LIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKG 443
++ CK K+ +A+ +F + + +A + +Y L+ GL L +A +M+E G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 444 RAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
+PN T+ L++ C+V ++ ++ + + G
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Query: 222 EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVL 281
E + + +M GL+PN V+ ++ G G + AM++ G + DKG P+ YT +
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 282 VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH 341
V+ FC+ ++ A ++ M+ NG+ PN +YGV+++ +AV +M+ GH
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 342 VPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
P+ ++VD LC VE+A L +
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQ 264
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ PN V+ +L LCK V+ A+++ M G +P VV YT V+ + ++ A
Sbjct: 129 GLIPNAVA---MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDA 185
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
R+ ++ + G AP+A +Y VLV G L A+ +M E+G PN T+ +++A
Sbjct: 186 KRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDA 245
Query: 320 YCKWKKPGEAVNLLEDMVRKG 340
C+ K +A + ++ + +KG
Sbjct: 246 LCRVKGVEQAQSAIDTLNQKG 266
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Query: 362 ERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLI 420
E + E+++ +++ N VA ++ LCK G V EA +F + G++ ++ Y ++
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVA--MLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVV 173
Query: 421 AGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL 480
C+ ++ +A R++ M G APNAF+Y +L+ G + + EM E+G
Sbjct: 174 EAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHS 233
Query: 481 PNKSTY 486
PN T+
Sbjct: 234 PNVPTF 239
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 55/110 (50%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G P VV +++A CK +++E A R+ +M G+ PN SY ++ G +D A
Sbjct: 161 GTIPEVVIYTAVVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDA 220
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
+ E+L+ G +P+ T+ LVD CR + A +D + + G N
Sbjct: 221 VAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 326 PGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLR-KICGSDNTVAST 384
P ++ + + M G +P++ ++D LC++G V+ A +++ ++R K + + +
Sbjct: 115 PEDSDEIFKKMKEGGLIPNA---VAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTA 171
Query: 385 LIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKG 443
++ CK K+ +A+ +F + + +A + +Y L+ GL L +A +M+E G
Sbjct: 172 VVEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESG 231
Query: 444 RAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
+PN T+ L++ C+V ++ ++ + + G
Sbjct: 232 HSPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKG 266
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 129/315 (40%), Gaps = 51/315 (16%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T RG+ L+ P SAL+ ++ + S
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMIS------------------------------------ 127
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
G+ PN + +LK+ K + ++ +L +G ++ +T+++ Y G ++
Sbjct: 128 -LGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLE 186
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A + V DK D +YT L+ G+ +G + A K+ D++ V V++ MI
Sbjct: 187 DAHK----VFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDV----VSWNAMI 238
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVE--RACEVWRVLRKIC 375
Y + EA+ L +DM++ P VV + G++E R +W +
Sbjct: 239 SGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLW-IDDHGF 297
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARL 435
GS+ + + LI K G++ A +FE V +++NTLI G EA L
Sbjct: 298 GSNLKIVNALIDLYSKCGELETACGLFERLPYKDV---ISWNTLIGGYTHMNLYKEALLL 354
Query: 436 WDDMVEKGRAPNAFT 450
+ +M+ G PN T
Sbjct: 355 FQEMLRSGETPNDVT 369
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/319 (20%), Positives = 131/319 (41%), Gaps = 38/319 (11%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMG------------- 248
S V+ N+ +K K ++E + ++ DEML G+ P+ ++TT++
Sbjct: 172 SREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVE 231
Query: 249 ----------------------GYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFC 286
Y G++D A+ + + W DA T++ L+ +
Sbjct: 232 WFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYG 291
Query: 287 RQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSG 346
G + + ++M+ GV+PN V Y +I++ + K+P +A + +D++ G P+
Sbjct: 292 VSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWS 351
Query: 347 LCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGK-VLEARNVFEEF 405
+V + A ++R +++ S + + +C + V EA +F++
Sbjct: 352 TYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
Query: 406 EGGSVA--SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGN 463
+ T+++LI G + EA M E G P F +I + K
Sbjct: 412 KNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQ 471
Query: 464 AKEGIRILEEMCENGCLPN 482
+ +R +++ E G P+
Sbjct: 472 VDDVVRTFDQVLELGITPD 490
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 103/221 (46%), Gaps = 3/221 (1%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T IR YG++G D L + +++ LG++P++ + KR A ++K+ T
Sbjct: 285 TLIRIYGVSGNYDGCLNIYEEMKA-LGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLIT 343
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
G +PN + L++A + + A+ + EM GL V+ Y T++ A +D
Sbjct: 344 N-GFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVD 402
Query: 258 GAMRVLGEVLD-KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVM 316
A + ++ + + PD+ T++ L+ + GR+ A + M E G +P +
Sbjct: 403 EAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSV 462
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCE 357
I+ Y K K+ + V + ++ G P C +++V+ +
Sbjct: 463 IQCYGKAKQVDDVVRTFDQVLELGITPDDRFCGCLLNVMTQ 503
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 76/217 (35%), Gaps = 49/217 (22%)
Query: 278 YTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMV 337
Y V + F + L + K+ D+M E G++P+ T+ +I + P AV E M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMS 237
Query: 338 RKGHVPSSGLCCKVVDVLCEEGNVERA--------CEVWRVLRKICGSDNTVASTLIHWL 389
G P + ++D GNV+ A E WR+ D STLI
Sbjct: 238 SFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRI-------DAVTFSTLIRIY 290
Query: 390 CKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAF 449
G N++EE M G PN
Sbjct: 291 GVSGNYDGCLNIYEE----------------------------------MKALGVKPNLV 316
Query: 450 TYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
YN LI+ + + I +++ NG PN STY
Sbjct: 317 IYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTY 353
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 131/321 (40%), Gaps = 49/321 (15%)
Query: 193 KNSRTRFGVSP--NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY 250
+N+R F P +VVS N +L + E A+R+ ++ML +G+ PN ++ V+
Sbjct: 215 ENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISAC 274
Query: 251 AWRGD-----------------------------------MDGAMRVLGEVLDKGWAPDA 275
++R D + A R+ E+ G +
Sbjct: 275 SFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNL 331
Query: 276 TTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLED 335
T+ ++ G+ R G + +A ++ D M + V V++ +I Y + A+ ED
Sbjct: 332 VTWNAMISGYTRIGDMSSARQLFDTMPKRNV----VSWNSLIAGYAHNGQAALAIEFFED 387
Query: 336 MVRKGHV-PSSGLCCKVVDVLCEEGNVERA-CEVWRVLRKICGSDNTVASTLIHWLCKKG 393
M+ G P V+ ++E C V + + +++ +LI + G
Sbjct: 388 MIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGG 447
Query: 394 KVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNL 453
+ EA+ VF+E + V S YNTL G+ E L M ++G P+ TY
Sbjct: 448 NLWEAKRVFDEMKERDVVS---YNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTS 504
Query: 454 LINGFCKVGNAKEGIRILEEM 474
++ + G KEG RI + +
Sbjct: 505 VLTACNRAGLLKEGQRIFKSI 525
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 117/270 (43%), Gaps = 48/270 (17%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
N+++ K E A ++ D M +VVS+T ++ G+A D++ A + + +
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPE----NDVVSWTVMITGFAKVKDLENARKYFDRMPE 226
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
K ++ ++ G+ + G A+++ +DM GV+PNE T+ ++I A P
Sbjct: 227 KS----VVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSL 282
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHW 388
+L++ L +E V C V + L+
Sbjct: 283 TRSLVK--------------------LIDEKRVRLNC--------------FVKTALLDM 308
Query: 389 LCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
K + AR +F E G+ +L+T+N +I+G G++ A +L+D M ++ N
Sbjct: 309 HAKCRDIQSARRIFNEL--GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKR----NV 362
Query: 449 FTYNLLINGFCKVGNAKEGIRILEEMCENG 478
++N LI G+ G A I E+M + G
Sbjct: 363 VSWNSLIAGYAHNGQAALAIEFFEDMIDYG 392
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 161/371 (43%), Gaps = 39/371 (10%)
Query: 46 IQPPIKPWPHRLHPKLLASLISRQHDPHLSLQIFRHAQTHHRASSHHPLPYRAIFLKLSR 105
I +P + S + + DP +L I++ + + +L++
Sbjct: 20 IDSQTTAYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAMELTVQRLAK 79
Query: 106 ARCFPEMESLLSTL---PRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESR 162
++ F ++E+L+ + P+ + FL T IR YG A D A++ F ++ +
Sbjct: 80 SQRFSDIEALIESHKNNPKIKTETFLS--------TLIRSYGRASMFDHAMKMFEEMD-K 130
Query: 163 LGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFG-VSPNVVSCNILLKALCKVNEV 221
LG +V + + +F R+ ++P+ +S +L+K+ C +
Sbjct: 131 LGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLIKSYCDSGKP 190
Query: 222 EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVL 281
E A+ ++ +M G+ ++++TT++G G +D A + E+++KG D T Y V
Sbjct: 191 EKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCDLDNTVYNV- 249
Query: 282 VDGFCRQGRLVAAIK--------VMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLL 333
RL+ A K +M++M G++P+ V+Y ++ AYC EA +
Sbjct: 250 --------RLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVY 301
Query: 334 EDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR---VLRKICGSDNTVASTLIHWLC 390
E + + P++ ++ LC G ++ V++ ++ KI D L L
Sbjct: 302 EGLEQ----PNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKI--PDFKTCKHLTEGLV 355
Query: 391 KKGKVLEARNV 401
K ++ +AR V
Sbjct: 356 KNNRMEDARGV 366
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 95/222 (42%), Gaps = 42/222 (18%)
Query: 244 TTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAI-KVMDDME 302
+T++ Y D AM++ E+ G ++ L+ C L + ++ D+
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAA-CLHSDLFERVPQLFDEFP 164
Query: 303 E--NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
+ N + P++++YG++I++YC KP +A+ ++ DM KG + ++ L + G
Sbjct: 165 QRYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGL 224
Query: 361 VERACEVW-RVLRKICGSDNTVAST----------------------------------L 385
V+ A +W ++ K C DNTV + L
Sbjct: 225 VDEAESLWIEMVNKGCDLDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYL 284
Query: 386 IHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERG 427
+ C KG + EA+ V+E E + A T+ TLI LC G
Sbjct: 285 MTAYCVKGMMSEAKKVYEGLEQPNAA---TFRTLIFHLCING 323
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 68/125 (54%)
Query: 217 KVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDAT 276
K N+ A+ L+ M +G+ P+V+ YTT++ GY G++D A + E+ KG P+
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVF 760
Query: 277 TYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDM 336
TY ++ G C G A ++ +ME G PN V Y ++ K K EA ++++M
Sbjct: 761 TYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEM 820
Query: 337 VRKGH 341
V+KGH
Sbjct: 821 VKKGH 825
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 45/81 (55%)
Query: 406 EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAK 465
E G S+L Y TLI G GEL +A ++ +M KG+ PN FTYN +I G C G +
Sbjct: 717 EVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFR 776
Query: 466 EGIRILEEMCENGCLPNKSTY 486
E +L+EM GC PN Y
Sbjct: 777 EACWLLKEMESRGCNPNFVVY 797
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 383 STLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+TLI G++ +A+ +F E G + ++ TYN++I GLC GE EA L +M
Sbjct: 728 TTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMES 787
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
+G PN Y+ L+ K G E ++++EM + G
Sbjct: 788 RGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Query: 292 VAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKV 351
+AA+ ++ M+E G+ P+ + Y +I+ Y + +A + +M KG +P+ +
Sbjct: 706 LAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSM 765
Query: 352 VDVLCEEGNVERACEVWRVLR-KICGSDNTVASTLIHWLCKKGKVLEARNVFEE 404
+ LC G AC + + + + C + V STL+ +L K GK+ EAR V +E
Sbjct: 766 IRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
N G+ P+V+ L+ E++ A + EM G +PNV +Y +++ G
Sbjct: 713 NHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMA 772
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
G+ A +L E+ +G P+ Y+ LV + G+L A KV+ +M + G
Sbjct: 773 GEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 130/317 (41%), Gaps = 41/317 (12%)
Query: 192 FKNSRTRFGVSP--NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGG 249
+N+R F SP ++VS N L+ K+ E E A+ V M G+ P+ V+ ++
Sbjct: 207 MENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSS 266
Query: 250 YAWRGDMD-------------------------------GAMRVLGEVLDKGWAPDATTY 278
+ GD++ G + + D ++
Sbjct: 267 CSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSW 326
Query: 279 TVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVR 338
T ++ G+ R G L + K+ DDMEE V V + MI + K+ +A+ L ++M
Sbjct: 327 TTMISGYARCGLLDVSRKLFDDMEEKDV----VLWNAMIGGSVQAKRGQDALALFQEMQT 382
Query: 339 KGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN-TVASTLIHWLCKKGKVLE 397
P + + G ++ + R + K S N + ++L+ K G + E
Sbjct: 383 SNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISE 442
Query: 398 ARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLING 457
A +VF G + LTY +I GL G+ A +++M++ G AP+ T+ L++
Sbjct: 443 ALSVFH---GIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSA 499
Query: 458 FCKVGNAKEGIRILEEM 474
C G + G +M
Sbjct: 500 CCHGGMIQTGRDYFSQM 516
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 106/238 (44%), Gaps = 49/238 (20%)
Query: 250 YAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
+A GDM+ A +V D+ D ++ L++G+ + G AI V ME GV+P+
Sbjct: 201 FASCGDMENARKVF----DESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPD 256
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
+VT MI G V S C ++ G++ R E +
Sbjct: 257 DVT---MI----------------------GLVSS----CSML------GDLNRGKEFYE 281
Query: 370 VLRKICGSDNTV--ASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERG 427
+++ G T+ + L+ K G + EAR +F+ E ++ S + T+I+G G
Sbjct: 282 YVKE-NGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVS---WTTMISGYARCG 337
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
L + +L+DDM EK + +N +I G + ++ + + +EM + P++ T
Sbjct: 338 LLDVSRKLFDDMEEK----DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 41/250 (16%)
Query: 122 HSPQQFLDHCGEDPLV---TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXX 178
H ++ D+ + +V T I GY G D + + F +E + V
Sbjct: 309 HEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK-----DVVLWNAMIGG 363
Query: 179 XVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRV----------L 228
VQ KR + A ++F+ +T P+ ++ L A ++ ++V + + L
Sbjct: 364 SVQAKRGQDALALFQEMQTS-NTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSL 422
Query: 229 DEMLGMGLVP---------------------NVVSYTTVMGGYAWRGDMDGAMRVLGEVL 267
+ LG LV N ++YT ++GG A GD A+ E++
Sbjct: 423 NVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMI 482
Query: 268 DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN-GVQPNEVTYGVMIEAYCKWKKP 326
D G APD T+ L+ C G + M+ + P Y +M++ +
Sbjct: 483 DAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLL 542
Query: 327 GEAVNLLEDM 336
EA L+E M
Sbjct: 543 EEADRLMESM 552
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 135/305 (44%), Gaps = 39/305 (12%)
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR-- 261
+VV+ ++ LC+ V+ A + DEM NVV++TT++ GY +D A +
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMRE----RNVVTWTTMITGYRQNNRVDVARKLF 226
Query: 262 -VLGEVLDKGWAPDATTYTV------------------------LVDGFCRQGRLVAAIK 296
V+ E + W YT+ ++ GF G + A +
Sbjct: 227 EVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARR 286
Query: 297 VMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC 356
V D ME+ + T+ MI+AY + EA++L M ++G PS ++ V
Sbjct: 287 VFDLMEDR----DNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCA 342
Query: 357 EEGNVERACEV-WRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLT 415
+++ +V ++R D VAS L+ K G++++A+ VF+ F S ++
Sbjct: 343 TLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF---SSKDIIM 399
Query: 416 YNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMC 475
+N++I+G G EA +++ +M G PN T ++ G +EG+ I E M
Sbjct: 400 WNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESME 459
Query: 476 ENGCL 480
C+
Sbjct: 460 SKFCV 464
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 102/461 (22%), Positives = 170/461 (36%), Gaps = 101/461 (21%)
Query: 94 LPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPL---VTAIRGYGLAGKPD 150
L R +L + C E+ L + ++F D + + + GY G P
Sbjct: 6 LILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPK 65
Query: 151 SALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNI 210
A + F + R +V ++N+ A +VF+ R NVVS
Sbjct: 66 EARQLFDEMSER-----NVVSWNGLVSGYIKNRMIVEARNVFELMPER-----NVVSWTA 115
Query: 211 LLKALCK---VNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL 267
++K + V E E + E N VS+T + GG G +D A ++
Sbjct: 116 MVKGYMQEGMVGEAESLFWRMPE-------RNEVSWTVMFGGLIDDGRIDKARKLY---- 164
Query: 268 DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG 327
D D T ++ G CR+GR+ A + D+M E V VT+ MI Y + +
Sbjct: 165 DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNRVD 220
Query: 328 EAVNLLEDMVRKGHVPSSGL---------------------------CCKVVDVLCEEGN 360
A L E M K V + + C ++ E G
Sbjct: 221 VARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGE 280
Query: 361 VERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGG-------SVASL 413
+ +A V+ ++ DN +I +KG LEA ++F + + S+ S+
Sbjct: 281 ISKARRVFDLMED---RDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISI 337
Query: 414 LTYNTLIAGL------------CER-----------------GELCEAARLWDDMVEKGR 444
L+ +A L C+ GEL +A ++D K
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSK-- 395
Query: 445 APNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+ +N +I+G+ G +E ++I EM +G +PNK T
Sbjct: 396 --DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVT 434
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 125/290 (43%), Gaps = 10/290 (3%)
Query: 180 VQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPN 239
++ R + A +F R + P + L K L + + A + + ML GL P
Sbjct: 119 IKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLLFEVMLSEGLKPT 178
Query: 240 VVSYTTVMGGYAWRGDMDGAMRVLGEVLD-KGWAPDATTYTVLVDGFCRQGRLVAAIKVM 298
+ YT+++ Y +D A L + PD T+TVL+ C+ GR ++
Sbjct: 179 IDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIV 238
Query: 299 DDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKG-HVPSSGLCCKVVDVLCE 357
+M GV + VTY +I+ Y K E ++L DM+ G +P C + ++
Sbjct: 239 LEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPD---VCTLNSIIGS 295
Query: 358 EGNVE--RACEVWRVLRKICG--SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-S 412
GN R E W ++ G D T + LI K G + +V + E + +
Sbjct: 296 YGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLT 355
Query: 413 LLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
+TYN +I + G + + ++ M +G PN+ TY L+N + K G
Sbjct: 356 TVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAG 405
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 135/355 (38%), Gaps = 70/355 (19%)
Query: 144 GLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSP 203
G +PD A F + S G++P++ +++ A S + ++ P
Sbjct: 155 GNCKQPDQASLLFEVMLSE-GLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKP 213
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
+V + +L+ CK+ ++ ++ EM +G+ + V+Y T++ GY G + VL
Sbjct: 214 DVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVL 273
Query: 264 GEVLDKG---------------------------W---------APDATTYTVLVDGFCR 287
++++ G W PD TT+ +L+ F +
Sbjct: 274 ADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGK 333
Query: 288 QGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGL 347
G VMD ME+ VTY ++IE + K + + ++ M +G P+S
Sbjct: 334 AGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSIT 393
Query: 348 CCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEG 407
C +V+ + G V ++ VLR+I SD + +
Sbjct: 394 YCSLVNAYSKAGLV---VKIDSVLRQIVNSDVVLDTPF---------------------- 428
Query: 408 GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVG 462
+N +I + G+L L+ M E+ P+ T+ +I + G
Sbjct: 429 --------FNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHG 475
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 98/227 (43%), Gaps = 6/227 (2%)
Query: 94 LPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSAL 153
+ Y I +A F EMES+L+ + D C L + I YG G+ +
Sbjct: 251 VTYNTIIDGYGKAGMFEEMESVLADMIEDG-DSLPDVC---TLNSIIGSYG-NGRNMRKM 305
Query: 154 RTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLK 213
++ +G++P + + ++ SV RF S V+ NI+++
Sbjct: 306 ESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRF-FSLTTVTYNIVIE 364
Query: 214 ALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAP 273
K +E V +M G+ PN ++Y +++ Y+ G + VL ++++
Sbjct: 365 TFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVL 424
Query: 274 DATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
D + +++ + + G L ++ MEE +P+++T+ MI+ Y
Sbjct: 425 DTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTY 471
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 88/159 (55%)
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
+++ +L K ++ A ++ +M L P+ +++++ G +D +M+V E+
Sbjct: 318 LIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGF 377
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
G P AT + L+D + + G+L A+++ D+M+++G +PN Y ++IE++ K K A
Sbjct: 378 GHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVA 437
Query: 330 VNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW 368
+ + +DM + G +P+ ++++ G V+ A +++
Sbjct: 438 MTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIY 476
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 120/257 (46%), Gaps = 7/257 (2%)
Query: 181 QNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNV 240
++ R A +F+ + R + P+ + L+ ++ K ++ +++V EM G G P+
Sbjct: 325 KSGRLDAAFKLFQQMKER-KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSA 383
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD 300
+ +++ YA G +D A+R+ E+ G+ P+ YT++++ + G+L A+ V D
Sbjct: 384 TMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKD 443
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGN 360
ME+ G P TY ++E + + A+ + M G P ++ +L +
Sbjct: 444 MEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRL 503
Query: 361 VERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLI 420
V+ A ++ ++ + S + AS ++ K V A + F G S + T N +I
Sbjct: 504 VDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALK-WLRFMGSS--GIKTNNFII 560
Query: 421 AGL---CERGELCEAAR 434
L C + L ++AR
Sbjct: 561 RQLFESCMKNGLYDSAR 577
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 121/272 (44%), Gaps = 2/272 (0%)
Query: 209 NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD 268
N +++ L K ++EVA + G + +Y +M + +G A + +
Sbjct: 247 NQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEK 306
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
D +TY +++ + GRL AA K+ M+E ++P+ + ++++ K +
Sbjct: 307 TDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDT 366
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT-VASTLIH 387
++ + +M GH PS+ + ++D + G ++ A +W ++K N + + +I
Sbjct: 367 SMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIE 426
Query: 388 WLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
K GK+ A VF++ E G + + TY+ L+ G++ A ++++ M G P
Sbjct: 427 SHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRP 486
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
+Y L+ +IL EM G
Sbjct: 487 GLSSYISLLTLLANKRLVDVAGKILLEMKAMG 518
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 100/213 (46%), Gaps = 4/213 (1%)
Query: 277 TYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDM 336
Y ++ + +L A +E+G + + TY ++ + P +A + E M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 337 VRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL--RKICGSDNTVASTLIHWLCKKGK 394
+ + ++ L + G ++ A ++++ + RK+ S +V S+L+ + K G+
Sbjct: 305 EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPS-FSVFSSLVDSMGKAGR 363
Query: 395 VLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNL 453
+ + V+ E +G G S + +LI + G+L A RLWD+M + G PN Y +
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
Query: 454 LINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+I K G + + + ++M + G LP STY
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTY 456
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 112/243 (46%), Gaps = 3/243 (1%)
Query: 242 SYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM 301
+Y ++ A G +D A ++ ++ ++ P + ++ LVD + GRL ++KV +M
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM 374
Query: 302 EENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNV 361
+ G +P+ + +I++Y K K A+ L ++M + G P+ GL +++ + G +
Sbjct: 375 QGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKL 434
Query: 362 ERACEVWRVLRKICGSDN-TVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTL 419
E A V++ + K + S L+ G+V A ++ G L +Y +L
Sbjct: 435 EVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISL 494
Query: 420 IAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC 479
+ L + + A ++ +M G + + ++L+ + K + ++ L M +G
Sbjct: 495 LTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMI-YIKDASVDLALKWLRFMGSSGI 553
Query: 480 LPN 482
N
Sbjct: 554 KTN 556
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 147/347 (42%), Gaps = 21/347 (6%)
Query: 136 LVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKN- 194
V+ I Y AGK D+ALR + ++ + G RP+ ++ + +A +VFK+
Sbjct: 386 FVSLIDSYAKAGKLDTALRLWDEMK-KSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDM 444
Query: 195 SRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRG 254
+ F +P+ SC LL+ +V+ A+++ + M GL P + SY +++ A +
Sbjct: 445 EKAGFLPTPSTYSC--LLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKR 502
Query: 255 DMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYG 314
+D A ++L E+ G++ D VL+ + + + A+K + M +G++ N
Sbjct: 503 LVDVAGKILLEMKAMGYSVDVCASDVLMI-YIKDASVDLALKWLRFMGSSGIKTNNFIIR 561
Query: 315 VMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVD--VLCEEGNVERACEVWRVLR 372
+ E+ K A LLE +V L ++ V C++ + ER L
Sbjct: 562 QLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQDEDKERQ------LM 615
Query: 373 KICGSDNTVASTLIHWLC-----KKGKVLE-ARNVFE--EFEGGSVASLLTYNTLIAGLC 424
I + A + L +K VL R ++ ++E A+ N L+ L
Sbjct: 616 SILSATKHKAHAFMCGLFTGPEQRKQPVLTFVREFYQGIDYELEEGAARYFVNVLLNYLV 675
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRIL 471
G++ A +W E P A ++ I V N G ++
Sbjct: 676 LMGQINRARCVWKVAYENKLFPKAIVFDQHIAWSLDVRNLSVGAALI 722
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 88/167 (52%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
V P++V I+L+ + + A ++ DE+L +GL P+V +Y + G + D++GA+
Sbjct: 282 VEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGAL 341
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+++ + G P+ TY +L+ + G L A + +ME NGV N T+ +MI AY
Sbjct: 342 KMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEV 367
+ + A LLE+ S +V+ LCE+G +++A E+
Sbjct: 402 IEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVEL 448
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 104/210 (49%), Gaps = 15/210 (7%)
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
+TRF SP + ++++ L + + V VL++M + P++V YT V+ G D
Sbjct: 244 KTRF--SPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADED 301
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
A ++ E+L G APD TY V ++G C+Q + A+K+M M + G +PN VTY +
Sbjct: 302 YPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNI 361
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSS-------GLCCKVVDVLCEEGNVERACEVW 368
+I+A K A L ++M G +S +V +V+C G +E A +
Sbjct: 362 LIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMN 421
Query: 369 RVLRKICGSDNTVASTLIHWLCKKGKVLEA 398
++ ++ +I LC+KG + +A
Sbjct: 422 VFVK------SSRIEEVISRLCEKGLMDQA 445
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 102/225 (45%), Gaps = 12/225 (5%)
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG-- 327
G + +T+ +L+D CR G + A +++ M ++ V + Y ++ + CK K
Sbjct: 174 GVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCF 233
Query: 328 EAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIH 387
+ + LED+ + P V+ L E G R EV VL ++ D + +
Sbjct: 234 DVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGG---RGKEVVSVLNQM-KCDRVEPDLVCY 289
Query: 388 WLCKKGKVLE-----ARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVE 441
+ +G + + A +F+E +A + TYN I GLC++ ++ A ++ M +
Sbjct: 290 TIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNK 349
Query: 442 KGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G PN TYN+LI K G+ + +EM NG N T+
Sbjct: 350 LGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTF 394
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 171/394 (43%), Gaps = 29/394 (7%)
Query: 93 PLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSA 152
P YR + L+++ ++E++ S L + D E I YG +G+ + A
Sbjct: 72 PQAYRFVIKTLAKS---SQLENISSVLYHLEVSEKFD-TPESIFRDVIAAYGFSGRIEEA 127
Query: 153 LRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRH-RLAHSVFKNSRTRFGVSPNVVSCNIL 211
+ F +I + + PS V+ ++ L + + R GV + IL
Sbjct: 128 IEVFFKIPNFRCV-PSAYTLNALLLVLVRKRQSLELVPEILVKA-CRMGVRLEESTFGIL 185
Query: 212 LKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD--- 268
+ ALC++ EV+ A ++ M ++ + Y+ ++ D V+G + D
Sbjct: 186 IDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKD-SSCFDVIGYLEDLRK 244
Query: 269 KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGE 328
++P YTV++ GR + V++ M+ + V+P+ V Y ++++ + +
Sbjct: 245 TRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPK 304
Query: 329 AVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA-STLIH 387
A L ++++ G P ++ LC++ ++E A ++ + K+ N V + LI
Sbjct: 305 ADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIK 364
Query: 388 WLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
L K G + A+ +++E E V + T++ +I+ E E+ A L ++
Sbjct: 365 ALVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEE-------- 416
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL 480
AF N+ F K +E ++ +CE G +
Sbjct: 417 -AFNMNV----FVKSSRIEE---VISRLCEKGLM 442
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 66/136 (48%)
Query: 202 SPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
+P+V + N+ + LCK N++E A++++ M +G PNVV+Y ++ GD+ A
Sbjct: 318 APDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKT 377
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
+ E+ G ++ T+ +++ + +V A ++++ V +I C
Sbjct: 378 LWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLC 437
Query: 322 KWKKPGEAVNLLEDMV 337
+ +AV LL +V
Sbjct: 438 EKGLMDQAVELLAHLV 453
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 129/289 (44%), Gaps = 21/289 (7%)
Query: 195 SRTRFGVSP--NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
+R F P + VS L+ + E+++A ++ D+M V +VV Y +M G+
Sbjct: 132 ARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMMDGFVK 188
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVT 312
GDM A R+ E+ K T+T ++ G+C + AA K+ D M E N V+
Sbjct: 189 SGDMTSARRLFDEMTHKT----VITWTTMIHGYCNIKDIDAARKLFDAMPER----NLVS 240
Query: 313 YGVMIEAYCKWKKPGEAVNLLEDMVRKGHV-PSSGLCCKVVDVLCEEGNVERA--CEVWR 369
+ MI YC+ K+P E + L ++M + P V+ + + G + C +
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCF- 299
Query: 370 VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGEL 429
V RK V + ++ K G++ +A+ +F+E VAS +N +I G G
Sbjct: 300 VQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVAS---WNAMIHGYALNGNA 356
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
A L+ M+ + + P+ T +I G +EG + M E G
Sbjct: 357 RAALDLFVTMMIEEK-PDEITMLAVITACNHGGLVEEGRKWFHVMREMG 404
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
+APD T+T L + +++ + G + +++ Y K+ K G A
Sbjct: 74 FAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCAR 133
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLC 390
N ++M + V + L + G ++ A +++ + + D + + ++
Sbjct: 134 NAFDEMPHRSEVSWTALISGYIRC----GELDLASKLFDQMPHV--KDVVIYNAMMDGFV 187
Query: 391 KKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFT 450
K G + AR +F+E +V +T+ T+I G C ++ A +L+D M E+ N +
Sbjct: 188 KSGDMTSARRLFDEMTHKTV---ITWTTMIHGYCNIKDIDAARKLFDAMPER----NLVS 240
Query: 451 YNLLINGFCKVGNAKEGIRILEEM 474
+N +I G+C+ +EGIR+ +EM
Sbjct: 241 WNTMIGGYCQNKQPQEGIRLFQEM 264
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 123/272 (45%), Gaps = 16/272 (5%)
Query: 196 RTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGD 255
R RF NVVS N ++KA KV +V A + D+M + +S+ T++ GY
Sbjct: 274 RERF--CKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD----RDTISWNTMIDGYVHVSR 327
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
M+ A + E+ ++ DA ++ ++V G+ G + A + E + V++
Sbjct: 328 MEDAFALFSEMPNR----DAHSWNMMVSGYASVGNVELARHYFEKTPEK----HTVSWNS 379
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKIC 375
+I AY K K EAV+L M +G P ++ N+ ++ +++ K
Sbjct: 380 IIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTV 439
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARL 435
D V + LI + G+++E+R +F+E + ++T+N +I G G EA L
Sbjct: 440 IPDVPVHNALITMYSRCGEIMESRRIFDEMKLKR--EVITWNAMIGGYAFHGNASEALNL 497
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEG 467
+ M G P+ T+ ++N G E
Sbjct: 498 FGSMKSNGIYPSHITFVSVLNACAHAGLVDEA 529
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 38/256 (14%)
Query: 239 NVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQG---RLVAAI 295
N V++ T++ GY R +M+ A R L +V+ K D T+ ++ G+ G L A
Sbjct: 70 NTVTWNTMISGYVKRREMNQA-RKLFDVMPK---RDVVTWNTMISGYVSCGGIRFLEEAR 125
Query: 296 KVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVL 355
K+ D+M + ++ MI Y K ++ GEA+ L E M + V S + +
Sbjct: 126 KLFDEMPSR----DSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAM----ITGF 177
Query: 356 CEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVAS--- 412
C+ G V+ A + RK+ D++ L+ L K ++ EA V ++ GS+ S
Sbjct: 178 CQNGEVDSAV---VLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQY--GSLVSGRE 232
Query: 413 --LLTYNTLIAGLCERGELCEAARLWDDMV------------EKGRAPNAFTYNLLINGF 458
+ YNTLI G +RG++ EAAR D + + N ++N +I +
Sbjct: 233 DLVYAYNTLIVGYGQRGQV-EAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAY 291
Query: 459 CKVGNAKEGIRILEEM 474
KVG+ + ++M
Sbjct: 292 LKVGDVVSARLLFDQM 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 137/304 (45%), Gaps = 41/304 (13%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A +F+ R N V+ N ++ K E+ A ++ D M +VV++ T++
Sbjct: 59 ARDIFEKLEAR-----NTVTWNTMISGYVKRREMNQARKLFDVMPK----RDVVTWNTMI 109
Query: 248 GGYAWRGDMDGAMRVLGE---VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN 304
GY G +R L E + D+ + D+ ++ ++ G+ + R+ A+ + + M E
Sbjct: 110 SGYV----SCGGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER 165
Query: 305 GVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERA 364
N V++ MI +C+ + AV L M K P LC V ++ E E A
Sbjct: 166 ----NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSP---LCALVAGLIKNERLSEAA 218
Query: 365 CEVWRVLRKICGSDNTVAS--TLIHWLCKKGKVLEARNVFE------------EFEGGSV 410
+ + + G ++ V + TLI ++G+V AR +F+ EF
Sbjct: 219 WVLGQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFC 278
Query: 411 ASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRI 470
+++++N++I + G++ A L+D M ++ + ++N +I+G+ V ++ +
Sbjct: 279 KNVVSWNSMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFAL 334
Query: 471 LEEM 474
EM
Sbjct: 335 FSEM 338
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 52/85 (61%), Gaps = 11/85 (12%)
Query: 389 LCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNA 448
+ + G + EAR++FE+ E + +T+NT+I+G +R E+ +A +L+D M ++ +
Sbjct: 50 MIRSGYIAEARDIFEKLEARNT---VTWNTMISGYVKRREMNQARKLFDVMPKR----DV 102
Query: 449 FTYNLLINGFCKVGNAKEGIRILEE 473
T+N +I+G+ G GIR LEE
Sbjct: 103 VTWNTMISGYVSCG----GIRFLEE 123
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 135/343 (39%), Gaps = 41/343 (11%)
Query: 183 KRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVS 242
K+ R F+ T+ ++P + + N+L+ ++E A VL + G+ +
Sbjct: 447 KKQRAVKEAFR--FTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKL 504
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
YTT++ A G +D V ++ + G + T+ L+DG R G++ A +
Sbjct: 505 YTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILR 564
Query: 303 ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH--VPSSGLCCKVVDVLCEEGN 360
V+P+ V + +I A + A ++L +M + H P ++ C G
Sbjct: 565 SKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQ 624
Query: 361 VERACEVWRVLRK--ICGS----------------------------------DNTVAST 384
VERA EV++++ K I G+ D S
Sbjct: 625 VERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSA 684
Query: 385 LIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLWDDMVEKG 443
LI + EA + ++ + + ++Y++L+ C + +A L++ +
Sbjct: 685 LIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIK 744
Query: 444 RAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
P T N LI C+ + + L+E+ G PN TY
Sbjct: 745 LRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITY 787
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 96/227 (42%), Gaps = 1/227 (0%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ P+ +S L+KA C +VE A V + G+ YT + + GD D A
Sbjct: 605 IDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFAC 664
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+ ++ +K PD ++ L+D L A ++ D + G++ ++Y ++ A
Sbjct: 665 SIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGAC 724
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
C K +A+ L E + P+ ++ LCE + +A E ++ + NT
Sbjct: 725 CNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNT 784
Query: 381 VASTLIHWLCKKGKVLEAR-NVFEEFEGGSVASLLTYNTLIAGLCER 426
+ +++ ++ E + + +G V+ L I LC+R
Sbjct: 785 ITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLIMCRCITSLCKR 831
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 121/297 (40%), Gaps = 35/297 (11%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVM 247
A VF+ R + PNV L+ L K + E A + EM+ G V N YT ++
Sbjct: 133 AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALV 192
Query: 248 GGYAWRGDMDGAMRVLGEVLDK-GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGV 306
Y+ G D A +L + PD TY++L+ F + ++ DM G+
Sbjct: 193 SAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGI 252
Query: 307 QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACE 366
+PN +TY +I+AY K K E + L + +L E+
Sbjct: 253 RPNTITYNTLIDAYGKAKMFVEMESTL------------------IQMLGEDD------- 287
Query: 367 VWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCE 425
C D+ ++ + G++ N +E+F+ + ++ T+N L+ +
Sbjct: 288 --------CKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGK 339
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
G + + + + M + + TYN++I+ F + G+ K+ + M P+
Sbjct: 340 SGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPS 396
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/282 (19%), Positives = 127/282 (45%), Gaps = 11/282 (3%)
Query: 184 RHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSY 243
R A ++ + ++ P+V + +IL+K+ +V + +L +M G+ PN ++Y
Sbjct: 200 RFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITY 259
Query: 244 TTVMGGYAWRG---DMDGAM-RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMD 299
T++ Y +M+ + ++LGE PD+ T + F G++ +
Sbjct: 260 NTLIDAYGKAKMFVEMESTLIQMLGE---DDCKPDSWTMNSTLRAFGGNGQIEMMENCYE 316
Query: 300 DMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEG 359
+ +G++PN T+ +++++Y K + ++E M + + + V+D G
Sbjct: 317 KFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAG 376
Query: 360 NVERACEVWRVLR--KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTY 416
++++ ++R+++ +I S T+ S L+ + K + V E + L+ +
Sbjct: 377 DLKQMEYLFRLMQSERIFPSCVTLCS-LVRAYGRASKADKIGGVLRFIENSDIRLDLVFF 435
Query: 417 NTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGF 458
N L+ + E + + M +KG P+ TY ++ +
Sbjct: 436 NCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 102/231 (44%), Gaps = 10/231 (4%)
Query: 92 HPLPYRAIFLKLSRARCFPEMESLLSTLPRHSPQQFLDHCGEDP--LVTAIRGYGLAGKP 149
+ + Y + +A+ F EMES L + D C D + + +R +G G+
Sbjct: 255 NTITYNTLIDAYGKAKMFVEMESTLIQMLGE------DDCKPDSWTMNSTLRAFGGNGQI 308
Query: 150 DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCN 209
+ + + +S GI P++R ++ ++ +V + + ++ S +V+ N
Sbjct: 309 EMMENCYEKFQSS-GIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQ-KYHYSWTIVTYN 366
Query: 210 ILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDK 269
+++ A + +++ + M + P+ V+ +++ Y D VL + +
Sbjct: 367 VVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENS 426
Query: 270 GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
D + LVD + R + V++ ME+ G +P+++TY M++AY
Sbjct: 427 DIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAY 477
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 76/143 (53%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
GV P+ N+++KA K EV+ A+RV EM G PN +Y+ ++ G +G +
Sbjct: 218 GVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQG 277
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ E+ KG P+ + Y VL+ + RL A++V+ DM N + P+ +TY ++
Sbjct: 278 LGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTE 337
Query: 320 YCKWKKPGEAVNLLEDMVRKGHV 342
C+ + EA+ ++E+ ++ V
Sbjct: 338 LCRGGRGSEALEMVEEWKKRDPV 360
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 4/160 (2%)
Query: 224 AVRVL-DEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLV 282
AVR L +M G++P+ ++ YA ++D A+RV E+ G P+A TY+ LV
Sbjct: 206 AVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLV 265
Query: 283 DGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHV 342
G C +GR+ + +M+ G+ PN Y V+I + ++ EAV ++ DM+
Sbjct: 266 KGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLS 325
Query: 343 PSSGLCCKVVDVLCEEGNVERACEV---WRVLRKICGSDN 379
P V+ LC G A E+ W+ + G N
Sbjct: 326 PDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERN 365
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 43/210 (20%)
Query: 273 PDATTYTVLVDGFCRQGR--------LVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWK 324
PD TYT+L+ ++ L A + M+ NGV P+ ++I+AY K
Sbjct: 178 PDLETYTLLLSSLLKRFNKLNVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCL 237
Query: 325 KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAST 384
+ EA+ + ++M G P++ S
Sbjct: 238 EVDEAIRVFKEMALYGSEPNA----------------------------------YTYSY 263
Query: 385 LIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKG 443
L+ +C+KG+V + ++E + G V + Y LI L L EA + DM+
Sbjct: 264 LVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANS 323
Query: 444 RAPNAFTYNLLINGFCKVGNAKEGIRILEE 473
+P+ TYN ++ C+ G E + ++EE
Sbjct: 324 LSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%)
Query: 407 GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKE 466
G + N +I + E+ EA R++ +M G PNA+TY+ L+ G C+ G +
Sbjct: 217 NGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQ 276
Query: 467 GIRILEEMCENGCLPNKSTY 486
G+ +EM G +PN S Y
Sbjct: 277 GLGFYKEMQVKGMVPNGSCY 296
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 59/120 (49%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
+G PN + + L+K +C+ V + EM G+VPN Y ++ + +D
Sbjct: 252 YGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDE 311
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A+ V+ ++L +PD TY ++ CR GR A++++++ ++ E Y +++
Sbjct: 312 AVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAARLW 436
D V + +I K +V EA VF+E GS + TY+ L+ G+CE+G + + +
Sbjct: 222 DTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFY 281
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+M KG PN Y +LI E + ++ +M N P+ TY
Sbjct: 282 KEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTY 331
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 136/329 (41%), Gaps = 16/329 (4%)
Query: 150 DSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCN 209
D A+ + + S G P+ R + A +F+ R R N S +
Sbjct: 125 DKAIEVYTGMSS-FGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFR-----NFFSFD 178
Query: 210 ILLKALC----KVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGE 265
I L C + + V V + VL M+G G PN + ++ G + A +V+G
Sbjct: 179 IALSHFCSRGGRGDLVGVKI-VLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGL 237
Query: 266 VLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKK 325
++ G + +++LV GF R G A+ + + M + G PN VTY +I+ +
Sbjct: 238 MICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGM 297
Query: 326 PGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL--RKICGSDNTVAS 383
EA +L + +G P LC ++ G E A +V+ L RK+ T AS
Sbjct: 298 VDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFAS 357
Query: 384 TLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKG 443
L LC GK + G+ L+T N L + G A ++ M K
Sbjct: 358 IL-SSLCLSGKFDLVPRITHGI--GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKD 414
Query: 444 RAPNAFTYNLLINGFCKVGNAKEGIRILE 472
A + +TY + ++ C+ G + I++ +
Sbjct: 415 FALDCYTYTVYLSALCRGGAPRAAIKMYK 443
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 129/283 (45%), Gaps = 12/283 (4%)
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGY---AWR 253
+ FG PN + N+++ K+N V A+ + + + N S+ + + R
Sbjct: 135 SSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIR----FRNFFSFDIALSHFCSRGGR 190
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
GD+ G VL ++ +G+ P+ + ++ CR G + A +V+ M +G+ + +
Sbjct: 191 GDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVW 250
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLR 372
+++ + + +P +AV+L M++ G P+ ++ + G V+ A V +V
Sbjct: 251 SMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQS 310
Query: 373 KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGS-VASLLTYNTLIAGLCERGELCE 431
+ D + + +IH + G+ EAR VF E V T+ ++++ LC G+
Sbjct: 311 EGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDL 370
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
R+ + G + T NLL N F K+G +++L M
Sbjct: 371 VPRITHGI---GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIM 410
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 121/291 (41%), Gaps = 13/291 (4%)
Query: 194 NSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWR 253
N + G SPN+V+ L+K + V+ A VL ++ GL P++V ++ Y
Sbjct: 271 NKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRL 330
Query: 254 GDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTY 313
G + A +V + + PD T+ ++ C G+ ++ + G + VT
Sbjct: 331 GRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI---GTDFDLVTG 387
Query: 314 GVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK 373
++ + K A+ +L M K + LC G A ++++++ K
Sbjct: 388 NLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIK 447
Query: 374 ICGS-DNTVASTLIHWLCKKGKV-----LEARNVFEEFEGGSVASLLTYNTLIAGLCERG 427
D S +I L + GK L R + E++ +++Y I GL
Sbjct: 448 EKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYP----LDVVSYTVAIKGLVRAK 503
Query: 428 ELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENG 478
+ EA L DM E G PN TY +I+G CK ++ +IL E + G
Sbjct: 504 RIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEG 554
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 126/324 (38%), Gaps = 40/324 (12%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G PN +L+ C+ V A +V+ M+ G+ +V ++ ++ G+ G+ A
Sbjct: 207 GFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKA 266
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + +++ G +P+ TYT L+ GF G + A V+ ++ G+ P+ V +MI
Sbjct: 267 VDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHT 326
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
Y + + EA + + ++ VP ++ LC G + V R+ I +
Sbjct: 327 YTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDL---VPRITHGIGTDFD 383
Query: 380 TVASTLI-HWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLW- 436
V L+ + K G A V A TY ++ LC G A +++
Sbjct: 384 LVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYK 443
Query: 437 ------------------DDMVEKGRAPNA----------------FTYNLLINGFCKVG 462
D ++E G+ A +Y + I G +
Sbjct: 444 IIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAK 503
Query: 463 NAKEGIRILEEMCENGCLPNKSTY 486
+E + +M E G PN+ TY
Sbjct: 504 RIEEAYSLCCDMKEGGIYPNRRTY 527
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 5/176 (2%)
Query: 185 HRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYT 244
+R ++S + + RF P + NILLKA C + ++DEM +GL PN ++++
Sbjct: 506 NRNSNSPYIQASKRFCFKPTTATYNILLKA-CGTDYYR-GKELMDEMKSLGLSPNQITWS 563
Query: 245 TVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN 304
T++ GD++GA+R+L + G PD YT + L A + ++M
Sbjct: 564 TLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRY 623
Query: 305 GVQPNEVTYGVMIEAYCKWKKPGEA---VNLLEDMVRKGHVPSSGLCCKVVDVLCE 357
++PN VTY +++A K+ E + + +DM G+ P+ ++++ CE
Sbjct: 624 QIKPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCE 679
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 118/294 (40%), Gaps = 37/294 (12%)
Query: 193 KNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAW 252
K+ GV+PN + + L+ A VE A + +EML G PN + ++
Sbjct: 397 KDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVE 456
Query: 253 RGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG------- 305
D A R+ + W + ++ D +GR + + ++ NG
Sbjct: 457 ACQYDRAFRLF-----QSWKGSSVNESLYADDIVSKGRTSSP----NILKNNGPGSLVNR 507
Query: 306 --------------VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKV 351
+P TY ++++A G+ L+++M G P+ +
Sbjct: 508 NSNSPYIQASKRFCFKPTTATYNILLKACGTDYYRGK--ELMDEMKSLGLSPNQITWSTL 565
Query: 352 VDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLE-ARNVFEEFEGGSV 410
+D+ G+VE A + R + + VA T +C + K L+ A ++FEE +
Sbjct: 566 IDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQI 625
Query: 411 A-SLLTYNTLIAGLCERGELCEAAR---LWDDMVEKGRAPNAFTYNLLINGFCK 460
+ +TYNTL+ + G L E + ++ DM G PN LI +C+
Sbjct: 626 KPNWVTYNTLLKARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCE 679
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 128/323 (39%), Gaps = 60/323 (18%)
Query: 185 HRLAHS--VFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVS 242
H L ++ V+KN + V+ ++ S NILLK C V++A + E
Sbjct: 314 HDLGYTLKVYKNMQI-LDVTADMTSYNILLKTCCLAGRVDLAQDIYKE------------ 360
Query: 243 YTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDME 302
A R + G +++ DA TY ++ F A+KV DDM+
Sbjct: 361 --------AKRMESSGLLKL-----------DAFTYCTIIKVFADAKMWKWALKVKDDMK 401
Query: 303 ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVE 362
GV PN T+ +I A +A +L E+M+ G P+S ++ E +
Sbjct: 402 SVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYD 461
Query: 363 RACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA----------- 411
RA +++ + +++ A ++ KG+ + N+ + GS+
Sbjct: 462 RAFRLFQSWKGSSVNESLYADDIV----SKGRT-SSPNILKNNGPGSLVNRNSNSPYIQA 516
Query: 412 --------SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGN 463
+ TYN L+ + L D+M G +PN T++ LI+ G+
Sbjct: 517 SKRFCFKPTTATYNILLKACGT--DYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGD 574
Query: 464 AKEGIRILEEMCENGCLPNKSTY 486
+ +RIL M G P+ Y
Sbjct: 575 VEGAVRILRTMHSAGTRPDVVAY 597
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 179/467 (38%), Gaps = 85/467 (18%)
Query: 138 TAIRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
T + GY G D A F R+ + + + VQN + A +FK SR
Sbjct: 162 TMLSGYAQNGCVDDARSVFDRMPEKNDVSWNA-----LLSAYVQNSKMEEACMLFK-SRE 215
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+ + VS N LL K ++ A + D M V +VVS+ T++ GYA G +D
Sbjct: 216 NWAL----VSWNCLLGGFVKKKKIVEARQFFDSMN----VRDVVSWNTIITGYAQSGKID 267
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDM-EENGVQPNEV----- 311
A ++ D+ D T+T +V G+ + + A ++ D M E N V N +
Sbjct: 268 EAR----QLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYV 323
Query: 312 ---------------------TYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCK 350
T+ MI Y + K EA NL + M ++ V + +
Sbjct: 324 QGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAG 383
Query: 351 -------------VVDVLCEEGNVER--------------ACEVWRVL--RKICGSDNT- 380
V + E G + R A E+ + L R + G T
Sbjct: 384 YSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETG 443
Query: 381 --VASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
V + L+ CK G + EA ++F+E G + S +NT+IAG G A R ++
Sbjct: 444 CFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVS---WNTMIAGYSRHGFGEVALRFFES 500
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCEN-GCLPNKSTYXXXXXXXXXXX 497
M +G P+ T +++ G +G + M ++ G +PN Y
Sbjct: 501 MKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAG 560
Query: 498 XMNQEINKVVALAMSTGVDGELWDLLV--KHVVGNLDINATELDRIL 542
+ N + + D +W L+ V GN ++ T D+I
Sbjct: 561 LLEDAHNLMKNMPFEP--DAAIWGTLLGASRVHGNTELAETAADKIF 605
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 126/282 (44%), Gaps = 42/282 (14%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVP--NVVSYTTVMGGYAWRGDMDGAM 260
++ N+ + + + A+RV M P + VSY ++ GY G+ + A
Sbjct: 62 SDIKEWNVAISSYMRTGRCNEALRVFKRM------PRWSSVSYNGMISGYLRNGEFELAR 115
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
++ E+ ++ D ++ V++ G+ R L A ++ + M E V ++ M+ Y
Sbjct: 116 KLFDEMPER----DLVSWNVMIKGYVRNRNLGKARELFEIMPERDV----CSWNTMLSGY 167
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
+ +A ++ + M K V + L V + +E AC +++
Sbjct: 168 AQNGCVDDARSVFDRMPEKNDVSWNALLSAYV----QNSKMEEACMLFKSRENW------ 217
Query: 381 VASTLIHWLC------KKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAAR 434
L+ W C KK K++EAR F+ +V ++++NT+I G + G++ EA +
Sbjct: 218 ---ALVSWNCLLGGFVKKKKIVEARQFFDSM---NVRDVVSWNTIITGYAQSGKIDEARQ 271
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCE 476
L+D+ + FT+ +++G+ + +E + ++M E
Sbjct: 272 LFDE----SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 86/412 (20%), Positives = 168/412 (40%), Gaps = 70/412 (16%)
Query: 109 FPEMESLLSTLPRHSPQQFLDHCGEDPLV---TAIRGYGLAGKPDSALRTFLRIESRLGI 165
F ++ T + S + L CG+ + AI Y G+ + ALR F R+
Sbjct: 37 FHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMP----- 91
Query: 166 RPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAV 225
R S ++N LA +F R ++VS N+++K + + A
Sbjct: 92 RWSSVSYNGMISGYLRNGEFELARKLFDEMPER-----DLVSWNVMIKGYVRNRNLGKAR 146
Query: 226 RVLDEMLGMGLVP--NVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG------------- 270
+ + ++P +V S+ T++ GYA G +D A V + +K
Sbjct: 147 ELFE------IMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQ 200
Query: 271 ----------------WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYG 314
WA ++ L+ GF ++ ++V A + D M V V++
Sbjct: 201 NSKMEEACMLFKSRENWA--LVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWN 254
Query: 315 VMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI 374
+I Y + K EA L ++ V +V + VE A E+ K+
Sbjct: 255 TIITGYAQSGKIDEARQLFDE----SPVQDVFTWTAMVSGYIQNRMVEEAREL---FDKM 307
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAAR 434
+ + ++ + ++ A+ +F+ +V+ T+NT+I G + G++ EA
Sbjct: 308 PERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS---TWNTMITGYAQCGKISEAKN 364
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
L+D M ++ + ++ +I G+ + G++ E +R+ +M G N+S++
Sbjct: 365 LFDKMPKR----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 93/236 (39%), Gaps = 22/236 (9%)
Query: 106 ARC--FPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRL 163
A+C E ++L +P+ P + I GY +G ALR F+++E
Sbjct: 354 AQCGKISEAKNLFDKMPKRDPVSW---------AAMIAGYSQSGHSFEALRLFVQMEREG 404
Query: 164 GI--RPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEV 221
G R S V + + H + G N LL CK +
Sbjct: 405 GRLNRSSFSSALSTCADVVALELGKQLHGRL----VKGGYETGCFVGNALLLMYCKCGSI 460
Query: 222 EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVL 281
E A + EM G ++VS+ T++ GY+ G + A+R + +G PD T +
Sbjct: 461 EEANDLFKEMAG----KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 282 VDGFCRQGRLVAAIKVMDDMEEN-GVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDM 336
+ G + + M ++ GV PN Y M++ + +A NL+++M
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNM 572
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 21/285 (7%)
Query: 197 TRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEML-----GMGLVPN-VVSYTTVMGGY 250
T GV PN ++ + L + L ++L +GL N V+ T ++G Y
Sbjct: 63 TLAGVEPNHIT---FIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMY 119
Query: 251 AWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE 310
+ RG A V + DK ++ T+ ++DG+ R G++ A K+ D M E +
Sbjct: 120 SKRGRFKKARLVFDYMEDK----NSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDL---- 171
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR- 369
+++ MI + K EA+ +M G P ++ G + V R
Sbjct: 172 ISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRY 231
Query: 370 VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGEL 429
VL + ++ V+++LI C+ G V AR VF E +V S +N++I G G
Sbjct: 232 VLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS---WNSVIVGFAANGNA 288
Query: 430 CEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
E+ + M EKG P+A T+ + VG +EG+R + M
Sbjct: 289 HESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIM 333
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 130/268 (48%), Gaps = 26/268 (9%)
Query: 207 SCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
+ N+ + L ++ ++ A ++ D ++ S+ +++ GY A ++ E+
Sbjct: 19 TANVRITHLSRIGKIHEARKLFDSCDS----KSISSWNSMVAGYFANLMPRDARKLFDEM 74
Query: 267 LDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKP 326
D+ + ++ LV G+ + G + A KV D M E V V++ +++ Y K
Sbjct: 75 PDR----NIISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVHNGKV 126
Query: 327 GEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLI 386
A +L M K V + + + ++G ++ AC+++ + I DN +++I
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFL----QDGRIDDACKLYEM---IPDKDNIARTSMI 179
Query: 387 HWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
H LCK+G+V EAR +F+E S S++T+ T++ G + + +A +++D M EK
Sbjct: 180 HGLCKEGRVDEAREIFDEM---SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK---- 232
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEM 474
++ ++ G+ + G ++ + E M
Sbjct: 233 TEVSWTSMLMGYVQNGRIEDAEELFEVM 260
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 145/297 (48%), Gaps = 32/297 (10%)
Query: 193 KNSRTRFGVSP--NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVP--NVVSYTTVMG 248
+++R F P N++S N L+ K E++ A +V D L+P NVVS+T ++
Sbjct: 65 RDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFD------LMPERNVVSWTALVK 118
Query: 249 GYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQP 308
GY G +D A + ++ +K + ++TV++ GF + GR+ A K+ + + +
Sbjct: 119 GYVHNGKVDVAESLFWKMPEK----NKVSWTVMLIGFLQDGRIDDACKLYEMIPDK---- 170
Query: 309 NEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW 368
+ + MI CK + EA + ++M + + + + V + V+ A +++
Sbjct: 171 DNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTM----VTGYGQNNRVDDARKIF 226
Query: 369 RVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGE 428
V+ + ++ + S L+ ++ + G++ +A +FE V ++ N +I+GL ++GE
Sbjct: 227 DVMPE--KTEVSWTSMLMGYV-QNGRIEDAEELFEVM---PVKPVIACNAMISGLGQKGE 280
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
+ +A R++D M E+ A ++ +I + G E + + M + G P T
Sbjct: 281 IAKARRVFDSMKERNDA----SWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPT 333
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 129/293 (44%), Gaps = 40/293 (13%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR---VLGEVL 267
++ LCK V+ A + DEM +V+++TT++ GY +D A + V+ E
Sbjct: 178 MIHGLCKEGRVDEAREIFDEMSER----SVITWTTMVTGYGQNNRVDDARKIFDVMPEKT 233
Query: 268 DKGWAPDATTY------------------------TVLVDGFCRQGRLVAAIKVMDDMEE 303
+ W Y ++ G ++G + A +V D M+E
Sbjct: 234 EVSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKE 293
Query: 304 NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVER 363
N+ ++ +I+ + + EA++L M ++G P+ ++ V ++
Sbjct: 294 R----NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHH 349
Query: 364 ACEV-WRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAG 422
+V +++R D VAS L+ K G++++++ +F+ F + + +N++I+G
Sbjct: 350 GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI---IMWNSIISG 406
Query: 423 LCERGELCEAARLWDDMVEKGRA-PNAFTYNLLINGFCKVGNAKEGIRILEEM 474
G EA +++ +M G PN T+ ++ G +EG++I E M
Sbjct: 407 YASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
>AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:901452-902719 REVERSE
LENGTH=363
Length = 363
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
+ AL K A+ + ++ +P+VV++T ++ YA G ++V +L G
Sbjct: 203 MFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRMLASG 262
Query: 271 WAPDATTYTVLVDGFCRQGRL-VAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEA 329
+P+A TY+VL+ G G+ A K + +M NG+ PN TY + EA+ + K A
Sbjct: 263 VSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEESA 322
Query: 330 VNLLEDMVRKGHVP 343
LL++M KG VP
Sbjct: 323 RELLQEMKGKGFVP 336
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM-DGAMR 261
P+VV+ +++A + + ++V ML G+ PN +Y+ ++ G A G A +
Sbjct: 230 PDVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKK 289
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
L E++ G +P+A TYT + + F R+G+ +A +++ +M+ G P+E +E Y
Sbjct: 290 YLLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALE-YK 348
Query: 322 KWKKPGEAVNLLED 335
+ + +NLL D
Sbjct: 349 RGQVFRTVINLLFD 362
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 200 GVSPNVVSCNILLKALCKVNEV-EVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
GVSPN + ++L+K L + + A + L EM+G G+ PN +YT V + G +
Sbjct: 262 GVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKEES 321
Query: 259 AMRVLGEVLDKGWAPD 274
A +L E+ KG+ PD
Sbjct: 322 ARELLQEMKGKGFVPD 337
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 348 CCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAST-LIHWLCKKGKVLEARNVFEEFE 406
K+ D L ++G A E++ ++ + VA T ++ G+ E VF
Sbjct: 200 AVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRML 259
Query: 407 GGSVA-SLLTYNTLIAGLCERGELCEAARLWD-DMVEKGRAPNAFTYNLLINGFCKVGNA 464
V+ + TY+ LI GL G+ + A+ + +M+ G +PNA TY + F + G
Sbjct: 260 ASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATYTAVFEAFVREGKE 319
Query: 465 KEGIRILEEMCENGCLPNK 483
+ +L+EM G +P++
Sbjct: 320 ESARELLQEMKGKGFVPDE 338
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 2/107 (1%)
Query: 382 ASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMV 440
A + L K G+ EA +F + + + ++ + ++ G+ E +++ M+
Sbjct: 200 AVKMFDALSKDGRTHEALELFSQIKDKNRMPDVVAHTAIVEAYANAGQAKETLKVFMRML 259
Query: 441 EKGRAPNAFTYNLLINGFCKVGNA-KEGIRILEEMCENGCLPNKSTY 486
G +PNA+TY++LI G G K+ + L EM NG PN +TY
Sbjct: 260 ASGVSPNAYTYSVLIKGLAADGKTHKDAKKYLLEMMGNGMSPNAATY 306
>AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2435007-2439344 REVERSE
LENGTH=821
Length = 821
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 121/262 (46%), Gaps = 19/262 (7%)
Query: 198 RFGVSPNVVSCNIL---LKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRG 254
+ G + ++S +IL L A+ +V E ++ R+ M + PN ++ +++
Sbjct: 398 KMGEAGLMISADILHSLLHAIDEVLEFDLVRRIHSIMCTKSVKPNTENFRSIIRLCTRIK 457
Query: 255 DMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYG 314
D +GA +LG + + P+++ + ++ G+ R+ + +A+ V+ M+E GV+P+ +T+G
Sbjct: 458 DFEGAYNMLGNLKNFNLEPNSSMFNCILAGYFREKNVSSALMVVKQMKEAGVKPDSITFG 517
Query: 315 VMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI 374
+I + E+M + G + + ++D G E+A +V
Sbjct: 518 YLIN---NCTQEDAITKYYEEMKQAGVQATKRIYMSLIDAYAASGKFEKAKQVLVDPDVP 574
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGG-------SVASLLTYNTLIAGLCERG 427
+ N + S LI L +GK +A +++EE S+ SL+ Y+ +G
Sbjct: 575 AINQNELKSVLISALASRGKWADALHIYEEMRKAECHVDPKSIISLIEYSD------SKG 628
Query: 428 ELCEAARLWDDMVEKGRAPNAF 449
EL +L DD+ + + F
Sbjct: 629 ELSTLVQLADDLQDDTSWIDGF 650
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 122/295 (41%), Gaps = 4/295 (1%)
Query: 195 SRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRG 254
SR+ G +P +S N L+ LC VE A VL + G +++T+ W+G
Sbjct: 417 SRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKG 476
Query: 255 DMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYG 314
D A ++ ++ P ++ C G++ A+ + + ++GV + +
Sbjct: 477 KPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFT 536
Query: 315 VMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI 374
+I + A L+ M KG+ P+ L V+ +CE + E+ + ++
Sbjct: 537 SLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQL 596
Query: 375 CGSDNTVAST--LIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTL-IAGLCERGELCE 431
++ V + I GK AR V++ + + + N L + + ++ +
Sbjct: 597 SLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIAD 656
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
A + D+ E+G+ Y ++I G CK + + LEEM G P+ Y
Sbjct: 657 ALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECY 710
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 118/299 (39%), Gaps = 23/299 (7%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G V N ++ L K N ++ +L EM+ G+ PN + + + G +D A
Sbjct: 352 GCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEA 411
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
+ + + G+AP A +Y L+ C + A V+ + G T+ + A
Sbjct: 412 LELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNA 471
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
C KP A L+ + +P CK++ LC+ G VE A + + K G D
Sbjct: 472 LCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNK-SGVDT 530
Query: 380 TVA--STLIH--WLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLC--ERGE----- 428
+ ++LI+ +G + A+ + E G + Y +I +C E GE
Sbjct: 531 SFKMFTSLIYGSITLMRGDI-AAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFT 589
Query: 429 --LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKST 485
L LW+ V+ YNL I G G K + + M +G P ++
Sbjct: 590 TLLKFQLSLWEHKVQ--------AYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVAS 640
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 111/280 (39%), Gaps = 35/280 (12%)
Query: 208 CNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVL 267
C+ L+ ++A++ M GL + Y ++ D + ++
Sbjct: 185 CDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQIS 244
Query: 268 DKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPG 327
+G+ A T+++LV FC+QG+L A + + N G++++A C +K
Sbjct: 245 VRGFVC-AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQ 303
Query: 328 EAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVW-RVLRKICGSDNTVASTLI 386
EA LL+++ G V N++RA +W R L K G N A L
Sbjct: 304 EATKLLDEIKLVGTV-----------------NMDRAYNIWIRALIK-AGFLNNPADFL- 344
Query: 387 HWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAP 446
+K LE G + YN+++ L + L + +M+ +G +P
Sbjct: 345 ----QKISPLE----------GCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSP 390
Query: 447 NAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
N T N + FCK G E + + E G P +Y
Sbjct: 391 NKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSY 430
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 115/251 (45%), Gaps = 12/251 (4%)
Query: 240 VVSYTTVMGGYAWRGDMDGAMRVLGEVLDK-GWAPDATTYTVLVDGFCRQGRLVAAIKVM 298
V +Y + G + G A R++ +++D+ G P + +++ + + ++ A+
Sbjct: 603 VQAYNLFIEGAGFAGKPKLA-RLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFF 661
Query: 299 DDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDV--LC 356
D+ E G + + Y VMI CK K +A++ LE+M +G PS + C V++ LC
Sbjct: 662 HDLREQG-KTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPS--IECYEVNIQKLC 718
Query: 357 EEGNVERACEVWRVLRKICGSDNT--VASTLIHWLCKKGKVLEARNVFEEFEGGSVASLL 414
E + A + RK G T + + L+H K V EA E + +
Sbjct: 719 NEEKYDEAVGLVNEFRK-SGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIED-KIPEMK 776
Query: 415 TYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+ LI R ++ + D+++EK + +TYN+L+ + A++ ++E +
Sbjct: 777 SLGELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIV-MNQAEDAYEMVERI 835
Query: 475 CENGCLPNKST 485
G +PN+ T
Sbjct: 836 ARRGYVPNERT 846
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 108/474 (22%), Positives = 181/474 (38%), Gaps = 55/474 (11%)
Query: 56 RLHPKLLASLISR-QHDPHLSLQIF----RHAQTHHRASSHHPLPYRAIFLKLSRARCFP 110
RL K + ++S ++D L+ F R HH ++ H AIF L A+
Sbjct: 109 RLTEKFVLDVLSHTRYDILCCLKFFDWAARQPGFHHTRATFH-----AIFKILRGAKLVT 163
Query: 111 EMESLLS-TLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPSV 169
M L ++ S + L C D LV GY +AG+ D AL+ F + R G+
Sbjct: 164 LMIDFLDRSVGFESCRHSLRLC--DALVV---GYAVAGRTDIALQHFGNMRFR-GLDLDS 217
Query: 170 RXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVS--------------------------- 202
V+ K +F R V
Sbjct: 218 FGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEAEDYLRAL 277
Query: 203 -PNV-VSC----NILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDM 256
PN C IL+ ALC + + A ++LDE+ +G V +Y + G +
Sbjct: 278 LPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFL 337
Query: 257 DGAMRVLGEVLD-KGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
+ L ++ +G + Y +V ++ L ++ +M GV PN+ T
Sbjct: 338 NNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNA 397
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR-VLRKI 374
+ +CK EA+ L G P++ ++ LC +VE+A +V + + +
Sbjct: 398 ALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRG 457
Query: 375 CGSDNTVASTLIHWLCKKGKVLEARN-VFEEFEGGSVASLLTYNTLIAGLCERGELCEAA 433
STL + LC KGK AR V E + + +I+ LC+ G++ E A
Sbjct: 458 HFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKV-EDA 516
Query: 434 RLWDDMVEKGRAPNAFT-YNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
+ +++ K +F + LI G + +++ M E G P +S Y
Sbjct: 517 LMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLY 570
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 15/271 (5%)
Query: 205 VVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYA--WRGDMDGAMRV 262
+ C I+ ALC V +VE A+ + + G+ + +T+++ G RGD+ A ++
Sbjct: 498 IAGCKII-SALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDI--AAKL 554
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCR-----QGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
+ + +KG+ P + Y ++ C + +K + E+ VQ Y + I
Sbjct: 555 IIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQA----YNLFI 610
Query: 318 EAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGS 377
E KP A + + M R G P+ ++ + + A + LR+ +
Sbjct: 611 EGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKT 670
Query: 378 DNTVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLW 436
+ +I LCK K+ +A + EE +G G S+ Y I LC + EA L
Sbjct: 671 KKRLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLV 730
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEG 467
++ + GR AF N+L++ K E
Sbjct: 731 NEFRKSGRRITAFIGNVLLHNAMKSKGVYEA 761
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 116/257 (45%), Gaps = 13/257 (5%)
Query: 204 NVVSCNILLKALCKV-NEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
+V N++L C + +V A R+ EM + PN SY+ ++ ++ G++ ++R+
Sbjct: 257 DVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRL 316
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
E+ +G AP Y LV R+ A+K+M + E G++P+ VTY MI C+
Sbjct: 317 YDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCE 376
Query: 323 WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD-NTV 381
K A N+L M+ + P+ E N E+ E VL ++ SD
Sbjct: 377 AGKLDVARNVLATMISENLSPT----VDTFHAFLEAVNFEKTLE---VLGQMKISDLGPT 429
Query: 382 ASTLIHWLCK--KGKVLE-ARNVFEEFEGGS-VASLLTYNTLIAGLCERGELCEAARLWD 437
T + L K KGK E A ++ E + VA+ Y I GL G L +A ++
Sbjct: 430 EETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYS 489
Query: 438 DMVEKGRAPNAFTYNLL 454
+M KG N LL
Sbjct: 490 EMKSKGFVGNPMLQKLL 506
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 101/232 (43%), Gaps = 35/232 (15%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
+ ++PN S + ++ KV + ++R+ DEM GL P + Y +++ D
Sbjct: 288 YCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDE 347
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAA------------------------ 294
AM+++ ++ ++G PD+ TY ++ C G+L A
Sbjct: 348 AMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTFHAFLE 407
Query: 295 -------IKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGL 347
++V+ M+ + + P E T+ +++ K K+P A+ + +M R V + L
Sbjct: 408 AVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPAL 467
Query: 348 CCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEAR 399
+ L G +E+A E++ ++ S V + ++ L ++ KV R
Sbjct: 468 YLATIQGLLSCGWLEKAREIYSEMK----SKGFVGNPMLQKLLEEQKVKGVR 515
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 2/174 (1%)
Query: 315 VMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKI 374
+M++ Y +A+ + M + H P ++ LC G++E+A E +K+
Sbjct: 194 LMMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKL 253
Query: 375 CGSDNTVASTLIHWLCK-KGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEA 432
D + +++ C V EA+ ++ E + + +Y+ +I+ + G L ++
Sbjct: 254 FPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDS 313
Query: 433 ARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
RL+D+M ++G AP YN L+ + E +++++++ E G P+ TY
Sbjct: 314 LRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTY 367
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 132/306 (43%), Gaps = 15/306 (4%)
Query: 186 RLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTT 245
RLA FK R + SC++++ L + +A ++ +M + +
Sbjct: 138 RLAFLAFKWGEKR--GCDDQKSCDLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMFL- 194
Query: 246 VMGGYAWRGDMDGAMRVLGEVLDK-GWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEEN 304
+M YA D A+R +++DK P + L+ CR G + A + M +
Sbjct: 195 MMDRYAAANDTSQAIRTF-DIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASK 251
Query: 305 GVQPNEVT-YGVMIEAYCK-WKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVE 362
+ P +V + V++ +C W EA + +M P+ ++ + GN+
Sbjct: 252 KLFPVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLF 311
Query: 363 RACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLI 420
+ ++ ++K V ++L++ L ++ EA + ++ E G +TYN++I
Sbjct: 312 DSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Query: 421 AGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL 480
LCE G+L A + M+ + +P T+ + F + N ++ + +L +M +
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSPTVDTF----HAFLEAVNFEKTLEVLGQMKISDLG 427
Query: 481 PNKSTY 486
P + T+
Sbjct: 428 PTEETF 433
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 133/289 (46%), Gaps = 27/289 (9%)
Query: 194 NSRTRFGVSP--NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVP--NVVSYTTVMGG 249
++R FG P N VS L+ A K E+E A + D L+P N+ S+ ++ G
Sbjct: 163 SARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFD------LMPERNLGSWNALVDG 216
Query: 250 YAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
GD+ A ++ E+ + D +YT ++DG+ + G +V+A + + E GV
Sbjct: 217 LVKSGDLVNAKKLFDEMPKR----DIISYTSMIDGYAKGGDMVSARDLFE--EARGVDVR 270
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
+ +I Y + +P EA + +M K P + ++ + G E +V
Sbjct: 271 --AWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDS 328
Query: 370 VLRKICG--SDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERG 427
L + S + V LI K G + A +FEE L++Y +++ G+ G
Sbjct: 329 YLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQ---RDLVSYCSMMEGMAIHG 385
Query: 428 ELCEAARLWDDMVEKGRAPN--AFTYNLLINGFCKVGNAKEGIRILEEM 474
EA RL++ MV++G P+ AFT L + G ++ +EG+R E M
Sbjct: 386 CGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL--VEEGLRYFELM 432
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 134/303 (44%), Gaps = 16/303 (5%)
Query: 188 AHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGM--GLVPNVVSYTT 245
A+ VFK+ + ++V+ L+ LCK + + A++V +M L P+ T+
Sbjct: 427 AYLVFKSMEEK-----DMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTS 481
Query: 246 VMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG 305
V A + ++V G ++ G + + L+D + + G A+KV M
Sbjct: 482 VTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMS--- 538
Query: 306 VQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERAC 365
N V + MI Y + P +++L M+ +G P S V+ + ++ +
Sbjct: 539 -TENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGK 597
Query: 366 EV-WRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLC 424
+ LR SD + + LI K G A N+F++ + SL+T+N +I G
Sbjct: 598 SLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH---KSLITWNLMIYGYG 654
Query: 425 ERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCEN-GCLPNK 483
G+ A L+D+M + G +P+ T+ LI+ G +EG I E M ++ G PN
Sbjct: 655 SHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNM 714
Query: 484 STY 486
Y
Sbjct: 715 EHY 717
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 115/241 (47%), Gaps = 14/241 (5%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG-LVPNVVSYTTVMGGYAWRGDMDGA 259
+SP S N ++AL + E A+ + + G +V ++ +++ + ++
Sbjct: 22 ISP--ASINSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYG 79
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMD--DMEENGVQPNEVT-YGVM 316
+ G V+ GW D T LV+ + + G L A++V D ++GV +VT + M
Sbjct: 80 KTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSM 139
Query: 317 IEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV----LR 372
I+ Y K+++ E V M+ G P + VV V+C+EGN R E ++ LR
Sbjct: 140 IDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRRE-EGKQIHGFMLR 198
Query: 373 KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEA 432
+D+ + + LI K G ++A VF E E S +++ +N +I G G +CE+
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKS--NVVLWNVMIVGFGGSG-ICES 255
Query: 433 A 433
+
Sbjct: 256 S 256
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 135/353 (38%), Gaps = 55/353 (15%)
Query: 140 IRGYGLAGKPDSALRTF--LRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRT 197
IRGY + GK D A+ + +R E I P K L F
Sbjct: 121 IRGYAIEGKFDEAIAMYGCMRKEE---ITPVSFTFSALLKACGTMKDLNLGRQ-FHAQTF 176
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVP--NVVSYTTVMGGYAWRGD 255
R V N ++ K ++ A +V DEM P +V+S+T ++ YA G+
Sbjct: 177 RLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEM------PERDVISWTELIAAYARVGN 230
Query: 256 MDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGV 315
M+ A E+ + D +T +V GF + + A++ D ME++G++ +EVT
Sbjct: 231 MECA----AELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 286
Query: 316 MIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKIC 375
I A + A ++ + G+ PS +
Sbjct: 287 YISACAQLGASKYADRAVQIAQKSGYSPSDHV---------------------------- 318
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARL 435
+ S LI K G V EA NVF +V TY+++I GL G EA L
Sbjct: 319 ----VIGSALIDMYSKCGNVEEAVNVFMSMNNKNV---FTYSSMILGLATHGRAQEALHL 371
Query: 436 WDDMVEKGR-APNAFTYNLLINGFCKVGNAKEGIRILEEMCEN-GCLPNKSTY 486
+ MV + PN T+ + G +G ++ + M + G P + Y
Sbjct: 372 FHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHY 424
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 139/305 (45%), Gaps = 18/305 (5%)
Query: 181 QNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNV 240
Q + LA S+ S G SPN+++ N L+ K+ ++E A + + +GL P+
Sbjct: 326 QQGKMELAESILV-SMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDE 384
Query: 241 VSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDD 300
SY +++ G+ + + A E+ G+ P++ L++ + G AIK ++D
Sbjct: 385 TSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIED 444
Query: 301 MEENGVQPNEVTYGVMIEAYCKWKK----PGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC 356
M G Q + + G++++AY K K P + +R S L V
Sbjct: 445 MTGIGCQYSSIL-GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYV---- 499
Query: 357 EEGNVERACEVWRVLRKICGSDNTVASTLIHWL---CKK-GKVLEARNVFE-EFEGGSVA 411
+ G V+ + +LR+ D+ S L H L CK+ G++ +A ++ + E
Sbjct: 500 KHGMVD---DCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEI 556
Query: 412 SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRIL 471
+L +T+I GE EA +L+ ++ G + +++++ + K G+ +E +L
Sbjct: 557 NLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVL 616
Query: 472 EEMCE 476
E M E
Sbjct: 617 EIMDE 621
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 127/286 (44%), Gaps = 20/286 (6%)
Query: 208 CNILLKALCKVNEVEVAVRVLDEMLGMG-LVPNVVSYTTVMGGYAWRGDMDGAMRVLGEV 266
CN +LK L ++ A++ D M G LV N V+Y+ ++ R + D A ++ E+
Sbjct: 142 CNGILKRLESCSDTN-AIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKEL 200
Query: 267 LDKGWAPDATTYTVL---VDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKW 323
G+ +Y V + ++G + A K M E GV+PN T G+++ Y K
Sbjct: 201 C--GFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKN 258
Query: 324 KKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVAS 383
EA M + G V S ++ + ++A EV ++++ + V
Sbjct: 259 WNVEEAEFAFSHMRKFGIVCESAYSS-MITIYTRLRLYDKAEEVIDLMKQ-----DRVRL 312
Query: 384 TLIHWL------CKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCEAARLW 436
L +WL ++GK+ A ++ E + +++ YNTLI G + ++ A L+
Sbjct: 313 KLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLF 372
Query: 437 DDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
+ G P+ +Y +I G+ + N +E +E+ G PN
Sbjct: 373 HRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPN 418
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 119/263 (45%), Gaps = 20/263 (7%)
Query: 235 GLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLD--KGWAPDATTYTVLVDGFCRQGRLV 292
G+V + + ++ V+ Y G ++ A VL E++D K PD + ++ R+
Sbjct: 588 GVVLDRIGFSIVVRMYVKAGSLEEACSVL-EIMDEQKDIVPDVYLFRDML-------RIY 639
Query: 293 AAIKVMDDME-------ENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSS 345
+ D ++ ++G+ N+ Y +I + E E+M+R G P++
Sbjct: 640 QKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNT 699
Query: 346 GLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFE-- 403
++DV + ++ E++ + ++ D +T+I K + +
Sbjct: 700 VTFNVLLDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNM 759
Query: 404 EFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGN 463
+F+G SV SL YNTL+ + ++ + + M + P+ +TYN++IN + + G
Sbjct: 760 QFDGFSV-SLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGW 818
Query: 464 AKEGIRILEEMCENGCLPNKSTY 486
E +L+E+ E+G P+ +Y
Sbjct: 819 IDEVADVLKELKESGLGPDLCSY 841
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/358 (18%), Positives = 149/358 (41%), Gaps = 40/358 (11%)
Query: 163 LGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVE 222
G+RP+V +N A F + R +FG+ + ++ ++ +
Sbjct: 239 FGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMR-KFGIVCESAYSS-MITIYTRLRLYD 296
Query: 223 VAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLV 282
A V+D M + + ++ ++ Y+ +G M+ A +L + G++P+ Y L+
Sbjct: 297 KAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLI 356
Query: 283 DGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHV 342
G+ + ++ AA + + G++P+E +Y MIE + + EA + +++ R G+
Sbjct: 357 TGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYK 416
Query: 343 PSSGLCCKVVDVLCEEGNVERA-----------CEVWRVLRKICGS-------------- 377
P+S ++++ + G+ + A C+ +L I +
Sbjct: 417 PNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVL 476
Query: 378 ----------DNTVASTLIHWLCKKGKVLEARNVFEE--FEGGSVASLLTYNTLIAGLCE 425
+ T S+L+ K G V + + E + + S L Y+ LI E
Sbjct: 477 KGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHL-YHLLICSCKE 535
Query: 426 RGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNK 483
G+L +A ++++ +E N + +I+ + +G E ++ + +G + ++
Sbjct: 536 SGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDR 593
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/336 (20%), Positives = 133/336 (39%), Gaps = 19/336 (5%)
Query: 109 FPEMESLLSTLPRHSPQQFLDHCGEDPLVTAIRGYGLAGKPDSALRTFLRIESRLGIRPS 168
F E E L L S LD G +R Y AG + A ++ + I P
Sbjct: 574 FSEAEKLYLNLK--SSGVVLDRIG---FSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPD 628
Query: 169 VRXXXXXXXXX----VQNKRHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVA 224
V +Q+K L + + K+ G+ N N ++ + ++
Sbjct: 629 VYLFRDMLRIYQKCDLQDKLQHLYYRIRKS-----GIHWNQEMYNCVINCCARALPLDEL 683
Query: 225 VRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDG 284
+EM+ G PN V++ ++ Y + + + L + + D +Y ++
Sbjct: 684 SGTFEEMIRYGFTPNTVTFNVLLDVYG-KAKLFKKVNELFLLAKRHGVVDVISYNTIIAA 742
Query: 285 FCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPS 344
+ + + +M+ +G + Y +++AY K K+ + ++L+ M + P
Sbjct: 743 YGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPD 802
Query: 345 SGLCCKVVDVLCEEGNVERACEVWRVLRKI-CGSDNTVASTLIHWLCKKGKVLEARNVFE 403
++++ E+G ++ +V + L++ G D +TLI G V EA + +
Sbjct: 803 HYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVK 862
Query: 404 EFEGGSVA-SLLTYNTLIAGLCERGELCEAAR--LW 436
E G ++ +TY L+ L E EA + LW
Sbjct: 863 EMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLW 898
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 265 EVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWK 324
E++ G+ P+ T+ VL+D + + ++ + +GV + ++Y +I AY K K
Sbjct: 689 EMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNK 747
Query: 325 KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRK-ICGSDNTVAS 383
+ +++M G S ++D ++ +E+ + + ++K G D+ +
Sbjct: 748 DYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYN 807
Query: 384 TLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEK 442
+I+ ++G + E +V +E E G L +YNTLI G + EA L +M +
Sbjct: 808 IMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 867
Query: 443 GRAPNAFTYNLLINGFCKVGNAKEGIR 469
P+ TY L+ + E I+
Sbjct: 868 NIIPDKVTYTNLVTALRRNDEFLEAIK 894
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 122/298 (40%), Gaps = 12/298 (4%)
Query: 194 NSRTRFGVSP----NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGG 249
++RT F P +VS ++ A + E A+ + +M M + P+ V+ +V+
Sbjct: 172 SARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNA 231
Query: 250 YAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPN 309
+ D+ + V+ G + L + + G++ A + D M+ PN
Sbjct: 232 FTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKS----PN 287
Query: 310 EVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWR 369
+ + MI Y K EA+++ +M+ K P + + + G++E+A ++
Sbjct: 288 LILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
Query: 370 -VLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGE 428
V R D ++S LI K G V AR VF+ V + ++ +I G G
Sbjct: 348 YVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDV---VVWSAMIVGYGLHGR 404
Query: 429 LCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
EA L+ M G PN T+ L+ G +EG M ++ P + Y
Sbjct: 405 AREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHY 462
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 15/242 (6%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG-LVPNVVSYTTVMGGYAWRGDMDGA 259
V P+ +S + A +V +E A R + E +G +V + ++ +A G ++GA
Sbjct: 319 VRPDTISITSAISACAQVGSLEQA-RSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGA 377
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
V LD+ D ++ ++ G+ GR AI + ME GV PN+VT+ ++ A
Sbjct: 378 RLVFDRTLDR----DVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMA 433
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
E M P V+D+L G++++A EV + + G
Sbjct: 434 CNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGV-- 491
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDM 439
TV L+ CKK + +E E+ + S+ NT + L AARLWD +
Sbjct: 492 TVWGALLS-ACKKHRHVE----LGEYAAQQLFSIDPSNT--GHYVQLSNLYAAARLWDRV 544
Query: 440 VE 441
E
Sbjct: 545 AE 546
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 114/280 (40%), Gaps = 24/280 (8%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
L+ A ++ A +V D++ P + + ++ GY+ A+ + +
Sbjct: 59 LIHASSSFGDITFARQVFDDLPR----PQIFPWNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
+PD+ T+ L+ L V + G + +I Y K ++ G A
Sbjct: 115 VSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSAR 174
Query: 331 NLLEDMVRKGHVPSSGLC--CKVVDVLCEEGNVERACEVWRVLRKICGSDNTVA--STLI 386
+ E + +P + +V + G A E++ +RK+ + VA S L
Sbjct: 175 TVFEGLP----LPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLN 230
Query: 387 HWLC----KKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEK 442
+ C K+G+ + A V E L++ NT+ A G++ A L+D M
Sbjct: 231 AFTCLQDLKQGRSIHASVVKMGLEI-EPDLLISLNTMYAKC---GQVATAKILFDKM--- 283
Query: 443 GRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
++PN +N +I+G+ K G A+E I + EM P+
Sbjct: 284 -KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPD 322
>AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11605156-11610651 FORWARD
LENGTH=843
Length = 843
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 102/208 (49%), Gaps = 12/208 (5%)
Query: 205 VVSCNIL---LKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMR 261
V+S NIL L+A+ ++ E + R+ M + PN ++ + D +GA
Sbjct: 425 VISANILHSLLQAIEQILEFNLVQRIYSIMSNKSVKPNSETFRKSINLCIRIKDFEGAYN 484
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYC 321
+LG + + AP+++ Y ++ G+ R+ ++ +A+KV+ +M+E V+P+ VT+ +I YC
Sbjct: 485 MLGNLKNFNLAPNSSMYNSIMAGYFREKKVNSALKVLKEMKEADVKPDSVTFSYLIN-YC 543
Query: 322 KWKKPGEAVNL---LEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
GE + ++M + G + + +V G E+A +V L
Sbjct: 544 -----GEEATIAKYYKEMKQAGVEVNKHVYMSLVKAYASCGQFEKAKQVLMDLEVPAKDH 598
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFE 406
N + S LI L G + EA +++EE +
Sbjct: 599 NELKSVLISALASNGNITEALSIYEEMK 626
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
V PN + + ++ + E A +L + L PN Y ++M GY ++ A
Sbjct: 458 SVKPNSETFRKSINLCIRIKDFEGAYNMLGNLKNFNLAPNSSMYNSIMAGYFREKKVNSA 517
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++VL E+ + PD+ T++ L++ +C + +A K +M++ GV+ N+ Y +++A
Sbjct: 518 LKVLKEMKEADVKPDSVTFSYLIN-YCGEEATIA--KYYKEMKQAGVEVNKHVYMSLVKA 574
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSG---LCCKVVDVLCEEGNVERACEVWRVLRKI 374
Y + +A +L D+ VP+ L ++ L GN+ A ++ ++K+
Sbjct: 575 YASCGQFEKAKQVLMDL----EVPAKDHNELKSVLISALASNGNITEALSIYEEMKKL 628
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 127/277 (45%), Gaps = 16/277 (5%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ P+ ++ L+KA ++ V V + +++ G +V +++ YA G + A
Sbjct: 113 IWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAG 172
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
R+ G++ + D ++T +V G+C+ G + A ++ D+M N T+ +MI Y
Sbjct: 173 RIFGQMGFR----DVVSWTSMVAGYCKCGMVENAREMFDEMPHR----NLFTWSIMINGY 224
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
K +A++L E M R+G V + + V+ G +E + + K + N
Sbjct: 225 AKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNL 284
Query: 381 VASTLI---HWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWD 437
+ T + W C G + +A +V FEG L+++++I GL G +A +
Sbjct: 285 ILGTALVDMFWRC--GDIEKAIHV---FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFS 339
Query: 438 DMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
M+ G P T+ +++ G ++G+ I E M
Sbjct: 340 QMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 143/350 (40%), Gaps = 44/350 (12%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
+R YG GK A TFL + +G P + RH + +K + R
Sbjct: 195 LRLYGQVGKIKMAEETFLEM-LEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERR 253
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
+ V N +L +L K + + + EM+ G+ PN +YT V+ YA +G + A
Sbjct: 254 ILLSTSV-YNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEA 312
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEA 319
++ GE+ G+ P+ TY+ ++ + G AI + +DM G+ P+ T M+
Sbjct: 313 LKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSL 372
Query: 320 YCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
Y K + +A++L DM R +P +D
Sbjct: 373 YYKTENYPKALSLFADMER-NKIP---------------------------------ADE 398
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+ +I K G +A+++FEE E +A TY + G + +A + +
Sbjct: 399 VIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEM 458
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGN---AKEGIRILEEMCENGCLPNKST 485
M + + F Y +++ + K+ N A+E R L + LP+ S+
Sbjct: 459 MKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKT----GLPDASS 504
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 124/291 (42%), Gaps = 34/291 (11%)
Query: 184 RHRLAHSVFKNSRTRFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSY 243
+HR A + + + + + V N L+KA+ + +++ A + + M G+ ++ +Y
Sbjct: 754 KHREAEHISRTCLEK-NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTY 812
Query: 244 TTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEE 303
T++ Y +D A+ + G D YT ++ + + G++ A+ + +M++
Sbjct: 813 NTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQK 872
Query: 304 NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVER 363
G++P +Y +M++ + E LL+ M R G ++ V E
Sbjct: 873 KGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAE 932
Query: 364 ACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGL 423
A + T+ TL+ E G S +++L++ L
Sbjct: 933 A-------------EKTI--TLVK------------------EKGIPLSHSHFSSLLSAL 959
Query: 424 CERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+ G + EA R + M E G +P++ ++ G+ G+A++GI E+M
Sbjct: 960 VKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKM 1010
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 9/287 (3%)
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
+V++ ++L K + +L+ M L + V+ V+ + GD+ A +
Sbjct: 601 DVMALGLMLNLRLKEGNLNETKAILNLMFKTDLGSSAVN--RVISSFVREGDVSKAEMIA 658
Query: 264 GEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY--C 321
++ G + T L+ + RQ +L A ++ E+ P + MI+AY C
Sbjct: 659 DIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKT-PGKSVIRSMIDAYVRC 717
Query: 322 KWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRV-LRKICGSDNT 380
W + +A L + KG P + +V+ L G A + R L K D
Sbjct: 718 GWLE--DAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTV 775
Query: 381 VASTLIHWLCKKGKVLEARNVFEEFEGGSV-ASLLTYNTLIAGLCERGELCEAARLWDDM 439
+TLI + + GK+ A ++E V S+ TYNT+I+ +L +A ++ +
Sbjct: 776 GYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNA 835
Query: 440 VEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPNKSTY 486
G + Y +I + K G E + + EM + G P +Y
Sbjct: 836 RRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSY 882
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 102/246 (41%), Gaps = 33/246 (13%)
Query: 232 LGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRL 291
L + P+VV YT V+ Y G + A E+L+ G PDA ++ + R GR
Sbjct: 180 LQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRH 239
Query: 292 VAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKV 351
A + ++E + + Y M+ + K G+ ++L +MV +G P+ V
Sbjct: 240 SAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLV 299
Query: 352 VDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA 411
V ++G E A + + ++ + G V
Sbjct: 300 VSSYAKQGFKEEALKAFGEMKSL---------------------------------GFVP 326
Query: 412 SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRIL 471
+TY+++I+ + G+ +A L++DM +G P+ +T +++ + K N + + +
Sbjct: 327 EEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLF 386
Query: 472 EEMCEN 477
+M N
Sbjct: 387 ADMERN 392
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 412 SLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRIL 471
S YN +++ L ++ + LW +MVE+G PN FTY L+++ + K G +E ++
Sbjct: 257 STSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAF 316
Query: 472 EEMCENGCLPNKSTY 486
EM G +P + TY
Sbjct: 317 GEMKSLGFVPEEVTY 331
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 16/283 (5%)
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVL 263
N++S N L+ ++ E A+ + E L + +Y +G R D+D +
Sbjct: 112 NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLH 171
Query: 264 GEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKW 323
G V+ G + VL+D + + G+L A+ + D +E ++V++ +I Y +
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER----DQVSWNSLISGYVRV 227
Query: 324 KKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLC---EEGNVERACEVWRVLRKI-CGSDN 379
E +NLL M R G ++ V+ C EG +E+ + K+ D
Sbjct: 228 GAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDI 287
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELC-----EAAR 434
V + L+ K G + EA +F +V +TYN +I+G + E+ EA +
Sbjct: 288 VVRTALLDMYAKNGSLKEAIKLFSLMPSKNV---VTYNAMISGFLQMDEITDEASSEAFK 344
Query: 435 LWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCEN 477
L+ DM +G P+ T+++++ + G +I +C+N
Sbjct: 345 LFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKN 387
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 18/257 (7%)
Query: 236 LVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGF--CRQGRLVA 293
L P+VV Y V+ R +GA VL ++ +G P TY ++++ C + LV
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVH 648
Query: 294 AIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVD 353
+ M+++ + PN + Y V++ K K EAV+ +EDM +G V S+ L +
Sbjct: 649 --EFFRKMQKSSI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLAR 705
Query: 354 VLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVAS- 412
LC G + + N V LI L K ++ F+ + VA+
Sbjct: 706 CLCSAGRCNEGLNMVNFV-------NPVVLKLIENLIYKADLVHTIQ-FQLKKICRVANK 757
Query: 413 --LLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRI 470
++TY LI + G + AA ++D M +K +PN T N+++ + + G +E +
Sbjct: 758 PLVVTYTGLIQACVDSGNIKNAAYIFDQM-KKVCSPNLVTCNIMLKAYLQGGLFEEAREL 816
Query: 471 LEEMCENGC-LPNKSTY 486
++M E+G + N S +
Sbjct: 817 FQKMSEDGNHIKNSSDF 833
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/320 (20%), Positives = 127/320 (39%), Gaps = 60/320 (18%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ P+VV N +L A + + E A VL ++ G P+ V+Y +M + +
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIME-VMLACEKYNLV 647
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+ K P+A Y VLV+ ++G+ A+ ++DME G+ + Y +
Sbjct: 648 HEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCL 707
Query: 321 CKWKKPGEAVN-----------LLEDMVRKG---HVPSSGL--CCKV------------V 352
C + E +N L+E+++ K H L C+V +
Sbjct: 708 CSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYTGLI 767
Query: 353 DVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFE--------- 403
+ GN++ A ++ ++K+C + + ++ + G EAR +F+
Sbjct: 768 QACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHI 827
Query: 404 ----EFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTY-NLLINGF 458
+FE + T+NT++ + C WDD + Y +L +G+
Sbjct: 828 KNSSDFESRVLPDTYTFNTML-------DTCAEQEKWDDF--------GYAYREMLRHGY 872
Query: 459 CKVGNAKEGIRILEEMCENG 478
NAK +R++ E G
Sbjct: 873 H--FNAKRHLRMVLEASRAG 890
>AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:10338723-10341007 REVERSE
LENGTH=390
Length = 390
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 125/296 (42%), Gaps = 49/296 (16%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG-LVPNVVSYTTVMGGYAWRGDMDGAMR 261
PN++SCN+++KA C V+ A+ + +L G L P + +Y + +D A
Sbjct: 106 PNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETYRILTKALVGAKRLDEACD 165
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE----------- 310
V+ + D Y +L+ GF +G+ V A ++ ++++ PN
Sbjct: 166 VVRSM----SRCDFAVYDILIRGFLDKGKFVRASQIFEELK----GPNSKLPWRNYHKAI 217
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH------VPSSGLCCKVVDVLCEEGNVERA 364
+ V Y W K G+ +E H + +G V+ L E G A
Sbjct: 218 AIFNVSFMDY--WFKQGKDEEAMEIFATLEHAELLNTISGNG----VLKCLVEHGRKTEA 271
Query: 365 CEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLC 424
E++ + +IC S+ T+ + K+G E FE Y +IA LC
Sbjct: 272 WELFLDMIEICDSE-----TVGIIMSKEGFFGEKTIPFER------VRRTCYTRMIASLC 320
Query: 425 ERGELCEAARLWDDMVEKGRA------PNAFTYNLLINGFCKVGNAKEGIRILEEM 474
++G + EA +L+ DM P+ T+ +ING+ KVG + I+ L +M
Sbjct: 321 QQGNMLEAEKLFADMFADVDGDDLLAGPDVSTFRAMINGYVKVGRVDDAIKTLNKM 376
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 150/350 (42%), Gaps = 54/350 (15%)
Query: 198 RFGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMD 257
+FG +VV+ N L+ K +++ A +V DEM +V+S+ +++ GYA G M
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYE----RDVISWNSLLSGYARLGQMK 192
Query: 258 GAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMI 317
A + +LDK ++T ++ G+ G V A+ +M+ G++P+E++ ++
Sbjct: 193 KAKGLFHLMLDK----TIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVL 248
Query: 318 EAYCKWK--KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKIC 375
+ + + G+ ++L + R+G + +G+C
Sbjct: 249 PSCAQLGSLELGKWIHLYAE--RRGFLKQTGVC--------------------------- 279
Query: 376 GSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARL 435
+ LI K G + +A +F + EG V ++++T+I+G G A
Sbjct: 280 -------NALIEMYSKCGVISQAIQLFGQMEGKDV---ISWSTMISGYAYHGNAHGAIET 329
Query: 436 WDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCL-PNKSTYXXXXXXXX 494
+++M PN T+ L++ VG +EG+R + M ++ + P Y
Sbjct: 330 FNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLA 389
Query: 495 XXXXMNQEINKVVALAMSTGVDGELWDLLVK--HVVGNLDINATELDRIL 542
+ + + + M D ++W L+ GNLD+ +D ++
Sbjct: 390 RAGKLERAVEITKTMPMKP--DSKIWGSLLSSCRTPGNLDVALVAMDHLV 437
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 121/289 (41%), Gaps = 44/289 (15%)
Query: 199 FGVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDG 258
FG +V L++ + A ++ DEML V +V + ++ GY G+MD
Sbjct: 145 FGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEML----VKDVNVWNALLAGYGKVGEMDE 200
Query: 259 AMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIE 318
A R L E++ W + ++T ++ G+ + GR AI+V M V+P+EVT ++
Sbjct: 201 A-RSLLEMM-PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258
Query: 319 AYCKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSD 378
A + + +G + L V+D+ + GN+ +A +V+ + +
Sbjct: 259 ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNE----- 313
Query: 379 NTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
RNV +T+ T+IAGL G EA +++
Sbjct: 314 --------------------RNV------------VTWTTIIAGLATHGHGAEALAMFNR 341
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM-CENGCLPNKSTY 486
MV+ G PN T+ +++ VG G R+ M + G PN Y
Sbjct: 342 MVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHY 390
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 133/320 (41%), Gaps = 55/320 (17%)
Query: 204 NVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVP--NVVSYTTVMGGYAWRGDMDGAMR 261
N VS N LL + E++ A RV D+ +P + VS+ ++ YA +GDM A
Sbjct: 169 NTVSWNSLLHGYLESGELDEARRVFDK------IPEKDAVSWNLIISSYAKKGDMGNACS 222
Query: 262 VLGEVLDKGWAPDATTYTVLVDGF--CRQGRLVAAIKVMDDM-EENGV------------ 306
+ + K A ++ +L+ G+ CR+ +L A D M ++NGV
Sbjct: 223 LFSAMPLKSPA----SWNILIGGYVNCREMKL--ARTYFDAMPQKNGVSWITMISGYTKL 276
Query: 307 --------------QPNEVTYGVMIEAYCKWKKPGEAVNLLEDMVRKGHV--PSSGLCCK 350
+ +++ Y MI Y + KP +A+ L M+ + P
Sbjct: 277 GDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSS 336
Query: 351 VVDVLCEEGNVERACEVWRVLR----KICGSDNTVASTLIHWLCKKGKVLEARNVFEEFE 406
VV + GN V + KI D+ ++++LI K G +A F+ F
Sbjct: 337 VVSANSQLGNTSFGTWVESYITEHGIKI---DDLLSTSLIDLYMKGGDFAKA---FKMFS 390
Query: 407 GGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKE 466
+ ++Y+ +I G G EA L+ M+EK PN T+ L++ + G +E
Sbjct: 391 NLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQE 450
Query: 467 GIRILEEMCENGCLPNKSTY 486
G + M ++ P+ Y
Sbjct: 451 GYKCFNSMKDHNLEPSADHY 470
>AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:10314118-10317160 FORWARD
LENGTH=435
Length = 435
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 125/296 (42%), Gaps = 49/296 (16%)
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMG-LVPNVVSYTTVMGGYAWRGDMDGAMR 261
PN++SCN+++KA C V+ A+ + +L G L P + +Y + +D A
Sbjct: 151 PNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETYRILTKALVGAKRLDEACD 210
Query: 262 VLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNE----------- 310
V+ + D Y +L+ GF +G+ V A ++ ++++ PN
Sbjct: 211 VVRSMS----RCDFAVYDILIRGFLDKGKFVRASQIFEELK----GPNSKLPWRNYHKAI 262
Query: 311 VTYGVMIEAYCKWKKPGEAVNLLEDMVRKGH------VPSSGLCCKVVDVLCEEGNVERA 364
+ V Y W K G+ +E H + +G V+ L E G A
Sbjct: 263 AIFNVSFMDY--WFKQGKDEEAMEIFATLEHAELLNTISGNG----VLKCLVEHGRKTEA 316
Query: 365 CEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLC 424
E++ + +IC S+ T+ + K+G E FE Y +IA LC
Sbjct: 317 WELFLDMIEICDSE-----TVGIIMSKEGFFGEKTIPFER------VRRTCYTRMIASLC 365
Query: 425 ERGELCEAARLWDDMVEKGRA------PNAFTYNLLINGFCKVGNAKEGIRILEEM 474
++G + EA +L+ DM P+ T+ +ING+ KVG + I+ L +M
Sbjct: 366 QQGNMLEAEKLFADMFADVDGDDLLAGPDVSTFRAMINGYVKVGRVDDAIKTLNKM 421
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 151/343 (44%), Gaps = 25/343 (7%)
Query: 140 IRGYGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRF 199
IRG+ + P+ ++ ++++ R G+ P + +L S+ S +
Sbjct: 80 IRGFSNSRNPEKSISVYIQM-LRFGLLPDHMTYPFLMKSSSRLSNRKLGGSL-HCSVVKS 137
Query: 200 GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGA 259
G+ ++ CN L+ + A ++ DEM N+V++ +++ YA GD+ A
Sbjct: 138 GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPH----KNLVTWNSILDAYAKSGDVVSA 193
Query: 260 MRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENG-VQPNEVTYGVMIE 318
V E+ ++ D T++ ++DG+ ++G A+++ D M G + NEVT M+
Sbjct: 194 RLVFDEMSER----DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVT---MVS 246
Query: 319 AYCKWKKPGEAVN---LLEDMVRKGHVP-SSGLCCKVVDVLCEEGNVERACEVWRVLRK- 373
C G A+N + + H+P + L ++D+ + G++ A W V +
Sbjct: 247 VICACAHLG-ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDA---WSVFYRA 302
Query: 374 -ICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIAGLCERGELCE 431
+ +D + + +I L G + E+ +F + + +T+ L+A G + E
Sbjct: 303 SVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKE 362
Query: 432 AARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
A + + E G P + Y +++ + G K+ + EM
Sbjct: 363 AWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEM 405
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 101/235 (42%), Gaps = 10/235 (4%)
Query: 211 LLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRVLGEVLDKG 270
+L+ CK + L LG+ VS T + GD+D A + L ++ D
Sbjct: 13 ILRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSD-- 70
Query: 271 WAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWKKPGEAV 330
P + ++ GF +I V M G+ P+ +TY ++++ +
Sbjct: 71 --PPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGG 128
Query: 331 NLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNTVASTLIHWLC 390
+L +V+ G +C ++ + G+ ++ ++ + ++++
Sbjct: 129 SLHCSVVKSGLEWDLFICNTLIHMY---GSFRDQASARKLFDEMPHKNLVTWNSILDAYA 185
Query: 391 KKGKVLEARNVFEEFEGGSVASLLTYNTLIAGLCERGELCEAARLWDDMVEKGRA 445
K G V+ AR VF+E S ++T++++I G +RGE +A ++D M+ G +
Sbjct: 186 KSGDVVSARLVFDEM---SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS 237
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 132/293 (45%), Gaps = 13/293 (4%)
Query: 185 HRLAHSVFKNSRTRF-GVSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSY 243
H A S+++ R +F G+ P+ + N + A K+ E+ V V + +GL +V
Sbjct: 113 HEAALSLYR--RMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHIN 170
Query: 244 TTVMGGYAWRGDMDGAMRVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEE 303
+++ YA G + A ++ E+ ++ D ++ ++ G+ G A+ + MEE
Sbjct: 171 HSLIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEE 226
Query: 304 NGVQPNEVTYGVMIEAYCKWKKPGEAVNLLEDM-VRKGHVPSSGLCCKVVDVLCEEGNVE 362
G +P+E T M+ A C LLE+M + K S+ L K++ + + G+++
Sbjct: 227 EGFEPDERTLVSMLGA-CSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLD 285
Query: 363 RACEVWRVLRKICGSDNTVASTLIHWLCKKGKVLEARNVFEEFEGGSVA-SLLTYNTLIA 421
A RV ++ D + +I + GK EA +F E E V+ T +T+++
Sbjct: 286 SA---RRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLS 342
Query: 422 GLCERGELCEAARLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
G L ++ E N + L++ + K G +E +R+ E M
Sbjct: 343 ACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAM 395
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 30/349 (8%)
Query: 143 YGLAGKPDSALRTFLRIESRLGIRPSVRXXXXXXXXXVQNKRHRLAHSVFKNSRTRFGVS 202
YG G D A + F I R + + VQN ++ A +F + R + GV
Sbjct: 218 YGKCGVLDDASKVFDEIPDRNAVAWNA-----LMVGYVQNGKNEEAIRLFSDMRKQ-GVE 271
Query: 203 PNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAMRV 262
P V+ + L A + VE + + G+ + + T+++ Y G ++ A V
Sbjct: 272 PTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMV 331
Query: 263 LGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCK 322
+ +K D T+ +++ G+ +QG + AI + M ++ + VT ++ A +
Sbjct: 332 FDRMFEK----DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAAR 387
Query: 323 WK--KPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
+ K G+ V +R L V+D+ + G++ A +V+ D+T
Sbjct: 388 TENLKLGKEVQCY--CIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF---------DST 436
Query: 381 VASTLIHW------LCKKGKVLEARNVFEEFE-GGSVASLLTYNTLIAGLCERGELCEAA 433
V LI W + G EA +F + G +++T+N +I L G++ EA
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 434 RLWDDMVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGCLPN 482
++ M G PN ++ ++NG + G ++E I L +M E+G PN
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPN 545
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 125/277 (45%), Gaps = 6/277 (2%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
V +++ N LL A + A+R+ M G+ PNV+++ ++ G +D A
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAK 496
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+ ++ G P+ ++T +++G + G AI + M+E+G++PN + V + A
Sbjct: 497 DMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSAC 556
Query: 321 CKWKKPGEAVNLLEDMVRK-GHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDN 379
+ ++R H + +VD+ + G++ +A +V S+
Sbjct: 557 AHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA---EKVFGSKLYSEL 613
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEFEG-GSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+++ +I G + EA ++ EG G +T +++ G++ +A ++ D
Sbjct: 614 PLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTD 673
Query: 439 MVEK-GRAPNAFTYNLLINGFCKVGNAKEGIRILEEM 474
+V K P Y L+++ G ++ +R++EEM
Sbjct: 674 IVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEM 710
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 123/292 (42%), Gaps = 32/292 (10%)
Query: 201 VSPNVVSCNILLKALCKVNEVEVAVRVLDEMLGMGLVPNVVSYTTVMGGYAWRGDMDGAM 260
+ P+VV N +L A + + E A VL ++ G P+ V+Y +M + +
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIME-VMLACEKYNLV 647
Query: 261 RVLGEVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAY 320
+ K P+A Y VLV+ ++G+ A+ ++DME G+ + Y +
Sbjct: 648 HEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCL 707
Query: 321 CKWKKPGEAVNLLEDMVRKGHVPSSGLCCKVVDVLCEEGNVERACEVWRVLRKICGSDNT 380
C + E +N+L+ + R + P ++ + GN++ A ++ ++K+C +
Sbjct: 708 CSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSPNLV 767
Query: 381 VASTLIHWLCKKGKVLEARNVFE-------------EFEGGSVASLLTYNTLIAGLCERG 427
+ ++ + G EAR +F+ +FE + T+NT++
Sbjct: 768 TCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTML------- 820
Query: 428 ELCEAARLWDDMVEKGRAPNAFTY-NLLINGFCKVGNAKEGIRILEEMCENG 478
+ C WDD + Y +L +G+ NAK +R++ E G
Sbjct: 821 DTCAEQEKWDDF--------GYAYREMLRHGYH--FNAKRHLRMVLEASRAG 862
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 107/229 (46%), Gaps = 13/229 (5%)
Query: 265 EVLDKGWAPDATTYTVLVDGFCRQGRLVAAIKVMDDMEENGVQPNEVTYGVMIEAYCKWK 324
E D PD Y +++ ++ + A V+ +++ G +P+ VTYG+++E
Sbjct: 583 EKWDPRLEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVML--- 639
Query: 325 KPGEAVNLLEDMVR---KGHVPSSGLCCKVVDVLCEEGNVERACEVWRVL--RKICGSDN 379
E NL+ + R K +P++ +V+ L +EG + A + R I GS
Sbjct: 640 -ACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGS-A 697
Query: 380 TVASTLIHWLCKKGKVLEARNVFEEF-EGGSVASLLTYNTLIAGLCERGELCEAARLWDD 438
+ L LC G+ E N+ ++ + ++TY LI + G + AA ++D
Sbjct: 698 ALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQ 757
Query: 439 MVEKGRAPNAFTYNLLINGFCKVGNAKEGIRILEEMCENGC-LPNKSTY 486
M +K +PN T N+++ + + G +E + ++M E+G + N S +
Sbjct: 758 M-KKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDF 805