Miyakogusa Predicted Gene
- Lj1g3v3457460.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3457460.1 Non Chatacterized Hit- tr|Q9SR26|Q9SR26_ARATH
Putative MYB family transcription factor
OS=Arabidopsi,66.67,0.0000000000001,seg,NULL,
NODE_89199_length_161_cov_19.422359.path2.1
(63 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G09370.2 | Symbols: MYB3R-3 | myb domain protein 3r-3 | chr3:... 59 9e-10
AT3G09370.1 | Symbols: MYB3R-3, AtMYB3R3 | myb domain protein 3r... 58 1e-09
AT5G02320.2 | Symbols: MYB3R-5 | myb domain protein 3r-5 | chr5:... 52 1e-07
AT5G02320.1 | Symbols: ATMYB3R5, MYB3R-5 | myb domain protein 3r... 52 1e-07
AT2G13960.1 | Symbols: | Homeodomain-like superfamily protein |... 52 1e-07
>AT3G09370.2 | Symbols: MYB3R-3 | myb domain protein 3r-3 |
chr3:2879534-2882128 FORWARD LENGTH=510
Length = 510
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 4 VKSEECCLENKQTTXXXXXXXXXXXXXXLRKSPGICSPASTSTSHR---RTTGPIRRAKG 60
VK E+ C+ENKQ+T KSP I SPA+ S +HR RT+GPIRRAKG
Sbjct: 25 VKIEDQCVENKQSTPASCSSVSEGSAGSSHKSPTIASPATVSPTHRYLGRTSGPIRRAKG 84
Query: 61 GWT 63
GWT
Sbjct: 85 GWT 87
>AT3G09370.1 | Symbols: MYB3R-3, AtMYB3R3 | myb domain protein
3r-3 | chr3:2879534-2882128 FORWARD LENGTH=505
Length = 505
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 4 VKSEECCLENKQTTXXXXXXXXXXXXXXLRKSPGICSPASTSTSHR---RTTGPIRRAKG 60
VK E+ C+ENKQ+T KSP I SPA+ S +HR RT+GPIRRAKG
Sbjct: 20 VKIEDQCVENKQSTPASCSSVSEGSAGSSHKSPTIASPATVSPTHRYLGRTSGPIRRAKG 79
Query: 61 GWT 63
GWT
Sbjct: 80 GWT 82
>AT5G02320.2 | Symbols: MYB3R-5 | myb domain protein 3r-5 |
chr5:483445-486347 REVERSE LENGTH=548
Length = 548
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%)
Query: 4 VKSEECCLENKQTTXXXXXXXXXXXXXXLRKSPGICSPASTSTSHRRTTGPIRRAKGGWT 63
+K E C+ENKQ KSP I +PA+ S+ RRT+GP+RRAKGGWT
Sbjct: 20 MKIEIQCMENKQPLAASCSSASEGSGCFFLKSPEIATPATVSSFPRRTSGPMRRAKGGWT 79
>AT5G02320.1 | Symbols: ATMYB3R5, MYB3R-5 | myb domain protein
3r-5 | chr5:483445-486347 REVERSE LENGTH=548
Length = 548
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%)
Query: 4 VKSEECCLENKQTTXXXXXXXXXXXXXXLRKSPGICSPASTSTSHRRTTGPIRRAKGGWT 63
+K E C+ENKQ KSP I +PA+ S+ RRT+GP+RRAKGGWT
Sbjct: 20 MKIEIQCMENKQPLAASCSSASEGSGCFFLKSPEIATPATVSSFPRRTSGPMRRAKGGWT 79
>AT2G13960.1 | Symbols: | Homeodomain-like superfamily protein |
chr2:5859683-5861105 FORWARD LENGTH=150
Length = 150
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%)
Query: 4 VKSEECCLENKQTTXXXXXXXXXXXXXXLRKSPGICSPASTSTSHRRTTGPIRRAKGGWT 63
+K E C+ENKQ KSP I +PA+ S+ RRT+GP+RRAKGGWT
Sbjct: 20 MKIEIQCMENKQPLAASCSSASEGSGCFFLKSPEIATPATVSSFPRRTSGPMRRAKGGWT 79