Miyakogusa Predicted Gene

Lj1g3v3445320.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3445320.1 tr|G7L5H7|G7L5H7_MEDTR E3 ubiquitin-protein
ligase ubr1 OS=Medicago truncatula GN=MTR_7g061540 PE=4
,74.22,0,zf-UBR,Zinc finger, N-recognin; Putative zinc finger in
N-recognin, a recogn,Zinc finger, N-recognin,CUFF.30818.1
         (1986 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G02310.1 | Symbols: PRT6 | proteolysis 6 | chr5:474279-482552...  1573   0.0  

>AT5G02310.1 | Symbols: PRT6 | proteolysis 6 | chr5:474279-482552
            FORWARD LENGTH=2006
          Length = 2006

 Score = 1573 bits (4073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 912/2000 (45%), Positives = 1196/2000 (59%), Gaps = 105/2000 (5%)

Query: 19   SRDRIVRRLARFGVPQEQLDQPGLVAFVKEKRELKPDLVNVILSVMEEA-----EAVQDS 73
            S D ++ RLA  GVP++   + GLV FV+       +LV+ +L   ++      EA +  
Sbjct: 15   SHDLVIERLASVGVPKKYRSKRGLVEFVRANPAKISELVSALLPTDDDVKLGLKEARERP 74

Query: 74   KSG-----LRKMFLESLVWLQWLMFEGDPNAALGGLSIMSVGQRGVCGAVWGRTDIAYRC 128
            +       ++K F ES+  LQWLMF+ +P+ +L  L+ +++ QRGVCG+VWG+ DIAYRC
Sbjct: 75   RKSAVSPTMKKRFRESMNMLQWLMFQDEPDVSLRNLAKLNLDQRGVCGSVWGQNDIAYRC 134

Query: 129  RTCEHDPTCAICVPCFENGDHKGHDYFVIYTXXXXXXXXXVTAWKRDGFCSMHKGAEQVK 188
            RTCE+DPTCAICVPCF+NGDH  HDY +IYT          TAWK DGFCS HKG+EQ++
Sbjct: 135  RTCENDPTCAICVPCFQNGDHNSHDYSIIYTGGGCCDCGDETAWKPDGFCSNHKGSEQIR 194

Query: 189  PLPEEIANTVAPVLGSLFDYWKGKLTIASDSVSKR----------KKAANDLTFSVVDML 238
            PL E +AN+V P+L +LF  W  KL  A  S  K           +K +N+LTF VV+ML
Sbjct: 195  PLSENLANSVGPILDALFTCWNNKLLSAESSGQKGARSNDTLVILQKMSNELTFIVVEML 254

Query: 239  LEFCKHSESLLSYVARLLFSSTGLLGIMVRAERFLSNDVVXXXXXXXXXXXGEPTFKYEF 298
            LEF   SESLLS+V+R + SS+GLL I+++AERFL  DV+           G+P FK EF
Sbjct: 255  LEFSMSSESLLSFVSRRIISSSGLLSILLKAERFLDQDVMKKLHDLFLKLIGDPVFKCEF 314

Query: 299  AKVFLTYYPSIINEAIKECSDQPLKRYPLLSMFSVQILTVPTLTPHLVKEINLLTMLLEC 358
            AK F++YYP +I+E +K+ +D   K+YPLLS FSVQILTVPTLTP LVKE+NLL MLL C
Sbjct: 315  AKAFVSYYPVVISEVVKQGTDNAFKKYPLLSTFSVQILTVPTLTPFLVKEMNLLAMLLGC 374

Query: 359  LENIFISCA-EDGHLQVSRWVNLYETTIRVIEDIRFVMSHVVVPKFITNDQQDISRTWMR 417
            L +IF+SC+ EDG LQ ++   L ET+ RVI D++FVMSH +V K+ T++ +++SR+W+ 
Sbjct: 375  LSDIFVSCSGEDGLLQATKLERLCETSERVIGDLKFVMSHAIVSKYATHEHRELSRSWLT 434

Query: 418  LLSYVQGMSPQKRETGQHIEEENENVHLPFVLGNFVANIHALLVEGAFSDATKGEMDDEL 477
            LL++ QGM+P KRETG  I+EEN+ +HL FVLG+ +A IH+LLV G +S A+     DE 
Sbjct: 435  LLTFAQGMNPLKRETGIPIDEENDYMHLFFVLGHSIAVIHSLLVNGTYSAAS-----DEE 489

Query: 478  VXXXXXXXXXXXXXYGDVRRHTKVGRLSEESSACNVTIRNNALACPKVFDTKSDTTSHLF 537
            +              GD  R+ KVGRLS E S C   + +++       +       H  
Sbjct: 490  IENDRNAKEEFDKCDGDGERYAKVGRLSHEDSVCTAIVSSSSFDSSMASEVHKIDPFHAL 549

Query: 538  LPQSATWLVYECLRAIENCFGVENTPGMLPNMLSQNSGIDYNDN-FSAFKRTMSNFRRGT 596
            LP SA +L+ ECL+ +E C G +         LS +SG +  ++  S  +R + N   G 
Sbjct: 550  LPSSAIYLIRECLKVLETCLGNDEGISKFLCKLSSSSGRNIPESKMSWPRRDLLNVETGG 609

Query: 597  HSFGRFASSGRDHGKQCS---DDYADSLEIGKSAVKDGTFRINDEIDPEN-TCTSSNLDD 652
                  ASS RD     S    D   +L +       G  + +   D +  +C S++L  
Sbjct: 610  SVSSNLASSSRDPSTGLSPLCGDIQTNLSLDNVCGPYGVVQTDVTADSKRVSCNSADLTK 669

Query: 653  SAMEEDFPVVSDGLRFLSSPDWPLIVYDVSSQDISVHIPLHRLISTLLQKALRRCFCESD 712
            +A          GLR L   DWP I YDVSSQ ISVH+PLHRL+S L+QKALR C+ ES 
Sbjct: 670  NA---------SGLRILGLCDWPDIHYDVSSQAISVHLPLHRLLSLLIQKALRICYGESA 720

Query: 713  VPDVSSDNSLEIYSDFFGYALRGSHPYGFSAFVMEHPLRIRVFCAQVHAGMWRKNGDAAL 772
              +  S +    ++DFF   +   HP GFSA VMEH L+IRVFCAQV AGMW+KNGD+AL
Sbjct: 721  SYNGVSISHEIPHADFFSSVIGDFHPCGFSALVMEHVLQIRVFCAQVIAGMWKKNGDSAL 780

Query: 773  LSCEWYKSVRWSEPGMELDLFLLQCCAALAPEDLYVSRILERFGLSNYVSLNLEQSNEHE 832
            +SCEWY+SVRWSE G+ELDLFLLQCCAALAP D YV ++L RFGLS+Y+SLN + +NE+E
Sbjct: 781  VSCEWYRSVRWSEQGLELDLFLLQCCAALAPADSYVDKLLSRFGLSSYLSLNPDITNEYE 840

Query: 833  PVLVQEMLTLIIQIVKERRFCGLTTAESLKRELIYKLSIGDATHSQLLKSLPRDLSKFEQ 892
            PVLVQEML L+IQI++ERRFCGL+TAESL+RE+I+KL+ GD THSQL+KSLPRDLSK ++
Sbjct: 841  PVLVQEMLGLLIQILQERRFCGLSTAESLRREIIFKLATGDFTHSQLVKSLPRDLSKSDE 900

Query: 893  LQGILDTVAIYSNPSGFNQGMYSLRWPYWKELDLYHSRWNSKDLQVAEERYLRFCSVSAL 952
            LQ +LD V++Y NPSG NQG YSL+   WKELDLYH RW S+DLQ AEER+ R+C VSAL
Sbjct: 901  LQEVLDDVSVYCNPSGMNQGKYSLQSSCWKELDLYHPRWQSRDLQSAEERFSRYCGVSAL 960

Query: 953  TTQLPRWTKIYPPLKGIARIATCKVVLQIIRAVLFYAVVTFKSAESRAPDGVXXXXXXXX 1012
            TTQLPRW  IYPPLKG+ARI TCK   QII + L+YA+ +  S +SRAPDGV        
Sbjct: 961  TTQLPRWRMIYPPLKGLARIGTCKATFQIISSALYYALQSGTSVKSRAPDGVLITALQLL 1020

Query: 1013 XXXXDICFQQKESSENPCHDVAQIPIIAFAGEIIDGSSFYDVGNQXXXXXXXXXMEMHRK 1072
                DIC QQ++S+   C     IPI+  AG  I G +      +         M+    
Sbjct: 1021 SLSLDICTQQRQSNSQDCCLENSIPILELAGLEIIGIA-QGTEKESLLSLLVSLMKTRMG 1079

Query: 1073 DNVDNIVDAGGCXXXXXXXXXXKKFAEIDDGCMTELQKLAPEVVNHISESVPARNXXXXX 1132
            D      + G C          KKF+ ID  CM  LQ LAPEVV        +       
Sbjct: 1080 DGRHQFPEPGSCNISSWIGNLLKKFSAIDSVCMNLLQSLAPEVVGQ------SGFDKVMS 1133

Query: 1133 XXXXXXXXXXXXXXXXXXIMEKMRSQQTKFLASVDPTVDDGSQLDHEGDLDS--EHDSEE 1190
                              IM KM+++Q+KFL+++  ++DD          DS  EHDSE 
Sbjct: 1134 GSTSDEKRKAKAKERQAAIMAKMKAEQSKFLSTLSSSMDDDDPRSEFETSDSVMEHDSEI 1193

Query: 1191 SKQVVCSLCHDPNSRHPISYLILLQKSRLVSSVDRGPVSWAQLCQSDKKLTPIINTKXXX 1250
            + + VCSLCHDP+S+ P+S+LI LQKS+L+S VDRGP SW Q  QS+KK++         
Sbjct: 1194 AVREVCSLCHDPDSKDPVSFLIFLQKSKLLSFVDRGPPSWDQCPQSEKKIS--------- 1244

Query: 1251 XXXXXXXXXXXXXXXXHITRIVQSAASELSSGGQPGEVNAFLKYVKNQFPALGNFQLPDT 1310
                               RI      +LS        N  ++ +K +   +GN Q    
Sbjct: 1245 --VDGAPDLLRMNASSDSLRISSPLMLQLSDDTISESAN-MIESIKARL--IGNGQTEKR 1299

Query: 1311 SYDEIEKTPYTFETLEQGMYFSIREEMHDLILPSNLMNGDENVQTAGGNSDAIKNTG-SV 1369
            S D   K     E+LE  MY ++R ++ ++I  S L   D     A   S+     G S 
Sbjct: 1300 SSDGRGKDESNMESLEIAMYQTVRNKIENMINQS-LTRVDHQPHEAENCSEKNSVGGPST 1358

Query: 1370 LLGKYTADLVRXXXXXXXXXXXXXXXXXXXXXXXQHPANG--GFSPIDCDGVHLSSCGHA 1427
            L G++     R                       + P  G  GF PIDCDGV+LSSCGHA
Sbjct: 1359 LQGRFPDIRSR--------------------QTSRRPDAGSDGFHPIDCDGVYLSSCGHA 1398

Query: 1428 VHQECLSRYLSSLKERSVRRIVFEGGHIVDPDQGEFLCPVCRRLVNCVLPTLPGELRKPI 1487
            VHQ CL RYL SLKERS RR VFEG HIVD  + EFLCPVCRRL N VLP  PG+L    
Sbjct: 1399 VHQSCLERYLKSLKERSGRRTVFEGAHIVDLKKKEFLCPVCRRLANSVLPECPGDLCSVS 1458

Query: 1488 KQSIVLNGSMHTTSPLAGSSSMTYSLRLEHAMKLLQSAANALGNDKFLKAIPLNHIDRTR 1547
            K    L  S  T   L    ++  SL L  A+ LL+SAA  + +    K +        R
Sbjct: 1459 K----LQDSPRTK--LRRKDALQPSLWLSEALCLLRSAAEVIEDGDRGKTVTPQGDGPRR 1512

Query: 1548 PNLENFSWVLSKMYFPGKQDK-LSRFSRRNHSMLMWDTLKYSLTSMEIAARCGKTSLTPN 1606
             +L++ S +L   YFP  +DK L R      S++MWDTLKYSL SMEI  R  K S+ P 
Sbjct: 1513 KDLKSVSKMLWDFYFPKPEDKTLKRLWLPPQSIVMWDTLKYSLISMEIGTRFAKNSMLPV 1572

Query: 1607 FALSSMYEELKSASGFILSLLLKLVQKTRSKNSLHVLQRFLGLQSFAESICSGVSLYANN 1666
            + + S+YEELK++ G ILS+LL++VQ +R+KN++HV QRF+G++  AESIC GVS  +++
Sbjct: 1573 YCIDSLYEELKTSKGTILSVLLRVVQSSRTKNTIHVRQRFVGMKHLAESICYGVSSSSSS 1632

Query: 1667 DVPGIGDKLSIMKSIEMDLSNTDLHFWSQASGPVLSHDPFSSLMWVLFCXXXXXXXXXXX 1726
             + G       +K+I++         W++AS PVL+HDPFSSLMW LFC           
Sbjct: 1633 SIFGSEGTTGSLKNIDL--------LWNRASDPVLAHDPFSSLMWALFCLPFPFLTCEES 1684

Query: 1727 XXXXXXXFYIVAVTQAIVXXXXXXXXXXXXXXXXXXDLINDIYRVLGESGYAQQYFVSNY 1786
                   F+ V++ Q ++                  +L+NDI   L ESG   +YF SN 
Sbjct: 1685 LLSLVHIFHSVSLVQTVI-AYCACRPSELSELNFGENLLNDISNALRESG-GWEYFRSNN 1742

Query: 1787 FDPSIDIKDAIRRFSFPFLRRCALLWKILYSSIPAPFCGEENLLDRLWNTPKDTMDRINI 1846
             D S DIKD IR++S PFLRRCALLWK+L S+ P     E ++ D   +   D MD I  
Sbjct: 1743 MDLSCDIKDTIRKYSLPFLRRCALLWKLLKST-PRKLHEESDMFDLPSDPTTDNMDFIYS 1801

Query: 1847 DMFEATKIQELENMFQIPSLDVVLKDELSRSSVLIWCRHFCKEFESQRFKYNMHVTPVVP 1906
               E   +QELE MF IP +D++L DEL RSS  IW +HF +E+   R K ++ +TPVVP
Sbjct: 1802 PQSELNHVQELEKMFNIPPIDIILNDELLRSSTQIWLQHFQREYRVNRVKRSLCITPVVP 1861

Query: 1907 FELMRLPNVYQNLLQRCIKQRCPECKSLLDEPALCLLCGRLCSPSWKSCCRESGCQTHAI 1966
            F+LM+LPN+YQ+LLQRCIK+RC  C  +++EP LCLLCG LCSP W  CCRESGC  HAI
Sbjct: 1862 FQLMKLPNLYQDLLQRCIKKRCVNCTKVIEEPVLCLLCGSLCSPIWSPCCRESGCPNHAI 1921

Query: 1967 TCGAGTGVFLLIRRTTVLLQ 1986
            TCGAGTGVFLLIRRTT+LLQ
Sbjct: 1922 TCGAGTGVFLLIRRTTILLQ 1941