Miyakogusa Predicted Gene

Lj1g3v3443930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3443930.1 NODE_41177_length_341_cov_626.360718.path2.1
         (57 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G02100.1 | Symbols: UNE18, ORP3A | Oxysterol-binding family p...   113   2e-26
AT3G09300.1 | Symbols: ORP3B | OSBP(oxysterol binding protein)-r...   110   1e-25
AT5G59420.1 | Symbols: ORP3C | OSBP(oxysterol binding protein)-r...   106   3e-24

>AT5G02100.1 | Symbols: UNE18, ORP3A | Oxysterol-binding family
           protein | chr5:413639-416016 FORWARD LENGTH=453
          Length = 453

 Score =  113 bits (283), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 54/57 (94%), Positives = 57/57 (100%)

Query: 1   MMQKYIGSDITSMVTLPVIIFEPMTMLQKMAELMEYSYLLDMADKTDDPYMRLVYAS 57
           MMQKYIGSD+TSMVTLPVIIFEPMTMLQKMAELMEYSYLLDMADKT+DPYMR+VYAS
Sbjct: 72  MMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSYLLDMADKTEDPYMRMVYAS 128


>AT3G09300.1 | Symbols: ORP3B | OSBP(oxysterol binding
           protein)-related protein 3B | chr3:2858068-2860462
           FORWARD LENGTH=458
          Length = 458

 Score =  110 bits (276), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/57 (91%), Positives = 57/57 (100%)

Query: 1   MMQKYIGSDITSMVTLPVIIFEPMTMLQKMAELMEYSYLLDMADKTDDPYMRLVYAS 57
           MMQKYIGSD+TSMVTLPVIIFEPMTMLQKMAELMEYS+LLDMADKT+DPY+R+VYAS
Sbjct: 77  MMQKYIGSDVTSMVTLPVIIFEPMTMLQKMAELMEYSHLLDMADKTEDPYLRMVYAS 133


>AT5G59420.1 | Symbols: ORP3C | OSBP(oxysterol binding
           protein)-related protein 3C | chr5:23961731-23964623
           FORWARD LENGTH=457
          Length = 457

 Score =  106 bits (265), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/57 (85%), Positives = 55/57 (96%)

Query: 1   MMQKYIGSDITSMVTLPVIIFEPMTMLQKMAELMEYSYLLDMADKTDDPYMRLVYAS 57
           MMQKYIGSDITSMVTLPV+IFEPMTMLQKMAE+MEYS+LLD AD+ +DPY+RLVYAS
Sbjct: 72  MMQKYIGSDITSMVTLPVVIFEPMTMLQKMAEIMEYSHLLDQADECEDPYLRLVYAS 128