Miyakogusa Predicted Gene

Lj1g3v3443760.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3443760.1 Non Chatacterized Hit- tr|D8TIS6|D8TIS6_VOLCA
Putative uncharacterized protein (Fragment) OS=Volvox
,35.37,0.00000000000001,seg,NULL; PRA1,Prenylated rab acceptor PRA1;
PRA1 PROTEIN,NULL,CUFF.30721.1
         (209 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G02040.2 | Symbols: PRA1.A1 | prenylated RAB acceptor 1.A1 | ...   305   1e-83
AT5G02040.1 | Symbols: PRA1.A1 | prenylated RAB acceptor 1.A1 | ...   305   1e-83
AT3G11402.2 | Symbols:  | Cysteine/Histidine-rich C1 domain fami...   301   2e-82
AT3G11397.1 | Symbols: PRA1.A3 | prenylated RAB acceptor 1.A3 | ...   288   2e-78
AT5G05987.1 | Symbols: PRA1.A2 | prenylated RAB acceptor 1.A2 | ...   288   3e-78

>AT5G02040.2 | Symbols: PRA1.A1 | prenylated RAB acceptor 1.A1 |
           chr5:401163-402471 FORWARD LENGTH=209
          Length = 209

 Score =  305 bits (782), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 150/209 (71%), Positives = 167/209 (79%)

Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFALPRSSSKWNSRLKCNLYYYRTNYFI 60
           MDWGNVT +DL DALREVDWSSPPRP SEFFSRF +P+S  KW+SRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTVDDLFDALREVDWSSPPRPPSEFFSRFTVPKSVPKWDSRLKCNLYYYRTNYFI 60

Query: 61  LIVSVLILGFLRRPXXXXXXXXXXXXXXXXNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120
           +IV +L LG L RP                NDSFAG+FSEK TRTVR+FSP LAAKMRPP
Sbjct: 61  MIVVILGLGVLTRPLAIFAALLTALSLAFLNDSFAGSFSEKATRTVRRFSPQLAAKMRPP 120

Query: 121 LTPVIRGRPAAKRAIYICGRPRWVFVLIFSSASFILWFVSAGLLTVLWALAIGLLATILH 180
           LTPV RGRP++KRAI++CG+PRWVFVL  S  SF LW++S+GLL V  AL I  LATILH
Sbjct: 121 LTPVTRGRPSSKRAIHVCGQPRWVFVLTCSLVSFALWYISSGLLRVSVALLIAHLATILH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209
           AS RTPNLKAR NTFREEFRAVWRNYSE+
Sbjct: 181 ASLRTPNLKARFNTFREEFRAVWRNYSEI 209


>AT5G02040.1 | Symbols: PRA1.A1 | prenylated RAB acceptor 1.A1 |
           chr5:401163-402471 FORWARD LENGTH=209
          Length = 209

 Score =  305 bits (782), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 150/209 (71%), Positives = 167/209 (79%)

Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFALPRSSSKWNSRLKCNLYYYRTNYFI 60
           MDWGNVT +DL DALREVDWSSPPRP SEFFSRF +P+S  KW+SRLKCNLYYYRTNYFI
Sbjct: 1   MDWGNVTVDDLFDALREVDWSSPPRPPSEFFSRFTVPKSVPKWDSRLKCNLYYYRTNYFI 60

Query: 61  LIVSVLILGFLRRPXXXXXXXXXXXXXXXXNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120
           +IV +L LG L RP                NDSFAG+FSEK TRTVR+FSP LAAKMRPP
Sbjct: 61  MIVVILGLGVLTRPLAIFAALLTALSLAFLNDSFAGSFSEKATRTVRRFSPQLAAKMRPP 120

Query: 121 LTPVIRGRPAAKRAIYICGRPRWVFVLIFSSASFILWFVSAGLLTVLWALAIGLLATILH 180
           LTPV RGRP++KRAI++CG+PRWVFVL  S  SF LW++S+GLL V  AL I  LATILH
Sbjct: 121 LTPVTRGRPSSKRAIHVCGQPRWVFVLTCSLVSFALWYISSGLLRVSVALLIAHLATILH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209
           AS RTPNLKAR NTFREEFRAVWRNYSE+
Sbjct: 181 ASLRTPNLKARFNTFREEFRAVWRNYSEI 209


>AT3G11402.2 | Symbols:  | Cysteine/Histidine-rich C1 domain family
           protein | chr3:3573516-3577765 FORWARD LENGTH=910
          Length = 910

 Score =  301 bits (772), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 141/209 (67%), Positives = 160/209 (76%)

Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFALPRSSSKWNSRLKCNLYYYRTNYFI 60
           MDW +V AED+I+ALREV+WS+ PR L+EFFSRFA PRS SKW SRLKCNLYYYRTNYFI
Sbjct: 702 MDWDSVAAEDVIEALREVEWSASPRSLAEFFSRFAFPRSFSKWMSRLKCNLYYYRTNYFI 761

Query: 61  LIVSVLILGFLRRPXXXXXXXXXXXXXXXXNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120
           L V VL L  + RP                NDSFA TF+EK+ RT+R FSPHLAAKMRPP
Sbjct: 762 LFVFVLGLALITRPLAILGAALTALSLAFLNDSFAATFNEKMIRTIRHFSPHLAAKMRPP 821

Query: 121 LTPVIRGRPAAKRAIYICGRPRWVFVLIFSSASFILWFVSAGLLTVLWALAIGLLATILH 180
             PVIRGR A ++ +YICG+PR VFVL+  +ASF+LWF S GLL VL+AL   LL  +LH
Sbjct: 822 HMPVIRGRSATRKTVYICGQPRLVFVLLGLTASFVLWFTSCGLLWVLYALTTALLMILLH 881

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209
           AS RTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 882 ASLRTPNLKARLNTFREEFRAVWRNYSEL 910


>AT3G11397.1 | Symbols: PRA1.A3 | prenylated RAB acceptor 1.A3 |
           chr3:3576173-3577765 FORWARD LENGTH=209
          Length = 209

 Score =  288 bits (736), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 141/209 (67%), Positives = 160/209 (76%)

Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFALPRSSSKWNSRLKCNLYYYRTNYFI 60
           MDW +V AED+I+ALREV+WS+ PR L+EFFSRFA PRS SKW SRLKCNLYYYRTNYFI
Sbjct: 1   MDWDSVAAEDVIEALREVEWSASPRSLAEFFSRFAFPRSFSKWMSRLKCNLYYYRTNYFI 60

Query: 61  LIVSVLILGFLRRPXXXXXXXXXXXXXXXXNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120
           L V VL L  + RP                NDSFA TF+EK+ RT+R FSPHLAAKMRPP
Sbjct: 61  LFVFVLGLALITRPLAILGAALTALSLAFLNDSFAATFNEKMIRTIRHFSPHLAAKMRPP 120

Query: 121 LTPVIRGRPAAKRAIYICGRPRWVFVLIFSSASFILWFVSAGLLTVLWALAIGLLATILH 180
             PVIRGR A ++ +YICG+PR VFVL+  +ASF+LWF S GLL VL+AL   LL  +LH
Sbjct: 121 HMPVIRGRSATRKTVYICGQPRLVFVLLGLTASFVLWFTSCGLLWVLYALTTALLMILLH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209
           AS RTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASLRTPNLKARLNTFREEFRAVWRNYSEL 209


>AT5G05987.1 | Symbols: PRA1.A2 | prenylated RAB acceptor 1.A2 |
           chr5:1804881-1806559 FORWARD LENGTH=209
          Length = 209

 Score =  288 bits (736), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 136/209 (65%), Positives = 158/209 (75%)

Query: 1   MDWGNVTAEDLIDALREVDWSSPPRPLSEFFSRFALPRSSSKWNSRLKCNLYYYRTNYFI 60
           MDW NV AED+I+ALREV+WS+PPR   EFFSRFA PRS SKW SRLKCNLYYYRTNYFI
Sbjct: 1   MDWDNVAAEDVIEALREVEWSTPPRSFGEFFSRFAFPRSFSKWKSRLKCNLYYYRTNYFI 60

Query: 61  LIVSVLILGFLRRPXXXXXXXXXXXXXXXXNDSFAGTFSEKVTRTVRQFSPHLAAKMRPP 120
           L++ VL L  + RP                NDSFA +F+EK  RT+R FSPH+AAKMRPP
Sbjct: 61  LVIFVLGLALVTRPLALVGAALTALSIAFLNDSFAASFNEKFIRTIRHFSPHMAAKMRPP 120

Query: 121 LTPVIRGRPAAKRAIYICGRPRWVFVLIFSSASFILWFVSAGLLTVLWALAIGLLATILH 180
             PVIRGR  A++ +Y+CG+PRWVFV+ F +AS ++WF S GLL VL+AL   L   I+H
Sbjct: 121 HMPVIRGRSTARKTVYVCGKPRWVFVITFLTASLVMWFSSCGLLWVLYALLTSLAVIIVH 180

Query: 181 ASFRTPNLKARLNTFREEFRAVWRNYSEL 209
           AS RTPNLKARLNTFREEFRAVWRNYSEL
Sbjct: 181 ASIRTPNLKARLNTFREEFRAVWRNYSEL 209