Miyakogusa Predicted Gene

Lj1g3v3442640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3442640.1 Non Chatacterized Hit- tr|K3XNA8|K3XNA8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si003381,53.66,3e-19,Plant lipid transfer protein / seed
storage,Bifunctional inhibitor/plant lipid transfer
protein/seed,CUFF.30747.1
         (120 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G53980.2 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...   139   4e-34
AT3G53980.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...   139   4e-34
AT5G05960.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...   129   4e-31
AT2G37870.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    96   5e-21

>AT3G53980.2 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr3:19987760-19988203 REVERSE LENGTH=114
          Length = 114

 Score =  139 bits (350), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 78/95 (82%), Gaps = 1/95 (1%)

Query: 26  VEAAGECGRSTTPDNEAMKLIPCASAAQDENASVSQSCCAQVQKIGKNPSCLCAVVLSNM 85
           V+ AGECGRS+ PDNEAMKL PCA AAQD N++V   CC Q+++  +NP CLCA++LS+ 
Sbjct: 21  VDGAGECGRSS-PDNEAMKLAPCAGAAQDANSAVPGGCCTQIKRFSQNPKCLCAILLSDT 79

Query: 86  AKMSGVNPKIAITIPKRCNLDNRPIGYKCGPYTLP 120
           AK SGV+P++A+TIPKRCN  NRP+GYKCG YTLP
Sbjct: 80  AKASGVDPEVALTIPKRCNFANRPVGYKCGAYTLP 114


>AT3G53980.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr3:19987760-19988203 REVERSE LENGTH=114
          Length = 114

 Score =  139 bits (350), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 62/95 (65%), Positives = 78/95 (82%), Gaps = 1/95 (1%)

Query: 26  VEAAGECGRSTTPDNEAMKLIPCASAAQDENASVSQSCCAQVQKIGKNPSCLCAVVLSNM 85
           V+ AGECGRS+ PDNEAMKL PCA AAQD N++V   CC Q+++  +NP CLCA++LS+ 
Sbjct: 21  VDGAGECGRSS-PDNEAMKLAPCAGAAQDANSAVPGGCCTQIKRFSQNPKCLCAILLSDT 79

Query: 86  AKMSGVNPKIAITIPKRCNLDNRPIGYKCGPYTLP 120
           AK SGV+P++A+TIPKRCN  NRP+GYKCG YTLP
Sbjct: 80  AKASGVDPEVALTIPKRCNFANRPVGYKCGAYTLP 114


>AT5G05960.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr5:1790256-1790694 FORWARD LENGTH=116
          Length = 116

 Score =  129 bits (324), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 61/95 (64%), Positives = 77/95 (81%), Gaps = 1/95 (1%)

Query: 26  VEAAGECGRSTTPDNEAMKLIPCASAAQDENASVSQSCCAQVQKIGKNPSCLCAVVLSNM 85
           V  AGECGR+  PD EA+KL PCA AAQD +A VS  CCA+V+++G+NP CLCAV+LS+ 
Sbjct: 23  VYGAGECGRNP-PDREAIKLAPCAMAAQDTSAKVSAICCARVKQMGQNPKCLCAVMLSST 81

Query: 86  AKMSGVNPKIAITIPKRCNLDNRPIGYKCGPYTLP 120
           A+ SG  P+I++TIPKRCN+ NRP+GYKCG YTLP
Sbjct: 82  ARSSGAKPEISMTIPKRCNIANRPVGYKCGAYTLP 116


>AT2G37870.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr2:15859280-15859723 FORWARD LENGTH=115
          Length = 115

 Score = 95.9 bits (237), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 53/101 (52%), Positives = 66/101 (65%), Gaps = 4/101 (3%)

Query: 22  EIQSVEAAGECGRSTTPDNEAM-KLIPCASAAQDENASVSQSCCAQVQK-IGKNPSCLCA 79
            + SVEAAGECGR   P N+A   L PC  A ++    V   CCA+V   I  NP CLCA
Sbjct: 17  SLASVEAAGECGR--MPINQAAASLSPCLPATKNPRGKVPPVCCAKVGALIRTNPRCLCA 74

Query: 80  VVLSNMAKMSGVNPKIAITIPKRCNLDNRPIGYKCGPYTLP 120
           V+LS +AK +G+NP IAI +PKRCN+ NRP G +CG Y +P
Sbjct: 75  VMLSPLAKKAGINPGIAIGVPKRCNIRNRPAGKRCGRYIVP 115