Miyakogusa Predicted Gene
- Lj1g3v3441250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3441250.1 Non Chatacterized Hit- tr|J3L5U1|J3L5U1_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G4,23.35,7e-18,PPR,Pentatricopeptide repeat; PPR:
pentatricopeptide repeat domain,Pentatricopeptide repeat; no
desc,CUFF.30699.1
(550 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 664 0.0
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 343 2e-94
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 327 9e-90
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 321 7e-88
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 320 2e-87
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 316 2e-86
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 314 1e-85
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 1e-85
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 313 3e-85
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 6e-85
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 311 8e-85
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 311 1e-84
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 3e-84
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 6e-84
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 2e-83
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 5e-83
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 6e-83
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 7e-83
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 303 2e-82
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 302 3e-82
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 4e-82
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 301 5e-82
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 5e-81
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 9e-81
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 1e-80
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 297 1e-80
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 297 1e-80
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 2e-80
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 296 2e-80
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 6e-80
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 8e-80
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 294 1e-79
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 294 1e-79
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 293 2e-79
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 293 3e-79
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 291 1e-78
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 290 1e-78
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 4e-78
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 7e-77
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 285 8e-77
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 284 1e-76
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 283 2e-76
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 283 2e-76
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 282 3e-76
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 8e-76
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 279 3e-75
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 6e-75
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 277 2e-74
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 275 4e-74
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 275 5e-74
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 6e-74
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 275 7e-74
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 275 7e-74
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 275 8e-74
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 275 8e-74
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 1e-73
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 274 2e-73
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 272 4e-73
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 8e-73
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 271 1e-72
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 271 1e-72
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 270 2e-72
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 3e-72
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 3e-72
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 269 3e-72
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 269 5e-72
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 6e-72
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 268 6e-72
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 268 9e-72
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 2e-71
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 266 2e-71
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 4e-71
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 263 3e-70
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 4e-70
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 5e-70
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 262 5e-70
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 261 1e-69
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 260 2e-69
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 260 2e-69
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 260 2e-69
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 3e-69
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 259 5e-69
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 8e-69
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 8e-69
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 256 3e-68
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 5e-68
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 255 6e-68
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 6e-68
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 2e-67
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 253 3e-67
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 252 4e-67
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 6e-67
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 1e-66
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 250 2e-66
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 2e-66
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 8e-66
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 2e-65
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 244 1e-64
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 244 1e-64
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 7e-64
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 8e-64
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 1e-63
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 240 2e-63
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 240 2e-63
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 240 2e-63
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 238 7e-63
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 7e-63
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 238 1e-62
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 3e-62
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 235 7e-62
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 9e-62
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 5e-61
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 1e-59
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 227 1e-59
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 227 2e-59
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 226 3e-59
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 4e-59
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 5e-59
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 5e-58
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 222 5e-58
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 1e-57
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 219 4e-57
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 7e-57
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 2e-56
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 5e-56
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 2e-55
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 213 3e-55
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 5e-55
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 212 6e-55
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 8e-55
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 209 5e-54
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 1e-53
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 1e-52
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 202 4e-52
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 8e-50
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 1e-49
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 192 4e-49
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 7e-49
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 6e-48
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 187 1e-47
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 167 2e-41
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 1e-40
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 92 1e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 89 8e-18
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 87 2e-17
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 5e-17
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 8e-17
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 84 4e-16
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 83 4e-16
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 9e-16
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 82 1e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 81 2e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 80 5e-15
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 77 4e-14
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 8e-14
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 8e-14
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 74 2e-13
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 4e-13
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 7e-13
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 72 8e-13
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 71 2e-12
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 4e-12
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 8e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 68 2e-11
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 67 3e-11
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 8e-11
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 2e-10
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 4e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 6e-10
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 61 2e-09
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 61 2e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 6e-09
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 59 6e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 59 7e-09
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 1e-08
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 8e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 55 1e-07
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 1e-07
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 5e-07
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 53 5e-07
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 52 8e-07
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 52 9e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 52 1e-06
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 51 2e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 50 5e-06
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 9e-06
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/547 (59%), Positives = 403/547 (73%), Gaps = 4/547 (0%)
Query: 4 LQSPQHVRQAPFQTHLCYTSHVSSRLPVCFVSINPSANPVKDIKSXXXXXXXQLIQSLCR 63
L P V Q + T + + + P C V++N NP + QLIQSLC+
Sbjct: 3 LSHPPQVIQPTYHT-VNFLPRSPLKPPSCSVALN---NPSISSGAGAKISNNQLIQSLCK 58
Query: 64 GGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKL 123
G KQA+ VL E +PS +T E+LI C +SS SD VHR+++D+G DQDP+LATKL
Sbjct: 59 EGKLKQAIRVLSQESSPSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKL 118
Query: 124 INMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDR 183
I MY +LGS+D ARKVFD+TR+RTIY+WNA FRAL + G GEE+L LY +MN G+ SDR
Sbjct: 119 IGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDR 178
Query: 184 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 243
FTYTYVLKACV SE +V L KGKEIHA++ R GY ++++MTTL+D+YA+FGC+ YA+
Sbjct: 179 FTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASY 238
Query: 244 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 303
VF MP +N VSWSAMI CYAKN +AL F +M+ E DS PNSVTMVSV
Sbjct: 239 VFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASL 298
Query: 304 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 363
+HG+ILRRGLDSI+PVI+AL+TMYGRCG++ +G+RVFD++ + DVVSWNSLI
Sbjct: 299 AALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLI 358
Query: 364 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 423
S YG +GYGKKAIQIFE M+ G SP+ ++F++VL ACSH GLVEEGK LFE+M + I
Sbjct: 359 SSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGI 418
Query: 424 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 483
P +EHYACMVDLLGRANRLDEA K+++DM EPGP VWGSLLGSCRIH N ELAERAS
Sbjct: 419 KPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIHGNVELAERASR 478
Query: 484 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFV 543
LF LEP NAGNYVLLADIYAEA+MW +VK V+KL+ R LQK+PG W+EV++K+YSFV
Sbjct: 479 RLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFV 538
Query: 544 SSEEDNP 550
S +E NP
Sbjct: 539 SVDEFNP 545
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 343 bits (879), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 180/467 (38%), Positives = 267/467 (57%), Gaps = 5/467 (1%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
TI + CA S GR VH V + ++ L++MY + G LD A+ VF E
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREM 357
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
+R++ + + A G E ++L+ +M GI D +T T VL C L
Sbjct: 358 SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL----L 413
Query: 204 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 263
+GK +H I + +I V L+D+YAK G + A VF M K+ +SW+ +IG Y
Sbjct: 414 DEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGY 473
Query: 264 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 323
+KN +AL LF+ ++LE P+ T+ V +HG+I+R G S
Sbjct: 474 SKNCYANEALSLFN-LLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFS 532
Query: 324 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI 383
V N+L+ MY +CG + + +FD + + D+VSW +I+ YG +G+GK+AI +F M
Sbjct: 533 DRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 384 HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 443
G+ ISF+++L ACSH+GLV+EG F M + +I P +EHYAC+VD+L R L
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Query: 444 DEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIY 503
+A + IE+MP P T+WG+LL CRIH + +LAE+ + +FELEP N G YVL+A+IY
Sbjct: 653 IKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIY 712
Query: 504 AEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
AEA+ W VK +RK +G+R L+K PGCSWIE+K ++ FV+ + NP
Sbjct: 713 AEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNP 759
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 222/490 (45%), Gaps = 25/490 (5%)
Query: 4 LQSPQHVRQA-PFQTHLCYTSHVSSRLPVCFVSINPSANPVKDIKSXXXXXXXQLIQSLC 62
LQ+ + +R + ++ + + C SI V D + ++ C
Sbjct: 21 LQNQKEIRSGVRVRKYVIFNRASLRTVSDCVDSITTFDRSVTDANTQ--------LRRFC 72
Query: 63 RGGNHKQALEVLW--SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLA 120
GN + A+++L + + +T+ ++Q CA S DG++V ++ +G D L
Sbjct: 73 ESGNLENAVKLLCVSGKWDIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLG 132
Query: 121 TKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP 180
+KL MY G L A +VFDE + WN LA G + L+++M SG+
Sbjct: 133 SKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVE 192
Query: 181 SDRFTYTYVLKACVVSEF-SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS 239
D +T++ CV F S+ + G+++H IL+ G+ E V +L+ Y K +
Sbjct: 193 MDSYTFS-----CVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVD 247
Query: 240 YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX 299
A VF M ++ +SW+++I Y N + K L +F QM++ + + T+VSV
Sbjct: 248 SARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIE--IDLATIVSVFAG 305
Query: 300 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 359
VH ++ N L+ MY +CG++ + VF ++ + VVS+
Sbjct: 306 CADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSY 365
Query: 360 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 419
S+I+ Y G +A+++FE M +G+SP + VL C+ L++EGK + E +
Sbjct: 366 TSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKE 425
Query: 420 KYRIHPGMEHYA--CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAEL 477
G + + ++D+ + + EA + +M + W +++G +C A
Sbjct: 426 N---DLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKD-IISWNTIIGGYSKNCYANE 481
Query: 478 AERASAMLFE 487
A +L E
Sbjct: 482 ALSLFNLLLE 491
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 103/208 (49%), Gaps = 11/208 (5%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
+P +T+ ++ +CA S+F GR++H Y++ +G D ++A L++MY + G+L A
Sbjct: 496 SPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHM 555
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
+FD+ + + W M G G+E + L+ QM +GI +D ++ +L AC S
Sbjct: 556 LFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGL 615
Query: 199 SVYPLQKGKEIHANILRH--GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA-KNSVS 255
+ +G NI+RH E + ++D+ A+ G + A MP ++
Sbjct: 616 ----VDEGWRFF-NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATI 670
Query: 256 WSAMI-GCYAKNDMPVKALELFHQMVLE 282
W A++ GC +D VK E + V E
Sbjct: 671 WGALLCGCRIHHD--VKLAEKVAEKVFE 696
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 327 bits (839), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 178/498 (35%), Positives = 278/498 (55%), Gaps = 10/498 (2%)
Query: 57 LIQSLCRGGNHKQALEVLWS--ERN--PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
++ + G + ALE++ S E N PS TI ++ + + S G+++H Y + SG
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
D ++T L++MY + GSL+ AR++FD ER + WN+ A +E + +++
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+M G+ + L AC + L++G+ IH + G + N+ V+ +L+ +Y
Sbjct: 327 KMLDEGVKPTDVSVMGALHACA----DLGDLERGRFIHKLSVELGLDRNVSVVNSLISMY 382
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
K + A S+F + ++ VSW+AMI +A+N P+ AL F QM P++ T
Sbjct: 383 CKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVK--PDTFT 440
Query: 293 MVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK 352
VSV +HG ++R LD + V AL+ MY +CG I I +FD +
Sbjct: 441 YVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS 500
Query: 353 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 412
V +WN++I YG +G+GK A+++FE M + P+ ++F++V+ ACSH+GLVE G
Sbjct: 501 ERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLK 560
Query: 413 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
F M Y I M+HY MVDLLGRA RL+EA I MP +P V+G++LG+C+IH
Sbjct: 561 CFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIH 620
Query: 473 CNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSW 532
N AE+A+ LFEL P + G +VLLA+IY A MW V VR M ++ L+K PGCS
Sbjct: 621 KNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSM 680
Query: 533 IEVKKKIYSFVSSEEDNP 550
+E+K +++SF S +P
Sbjct: 681 VEIKNEVHSFFSGSTAHP 698
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 177/327 (54%), Gaps = 9/327 (2%)
Query: 87 VLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRER 146
+L++ C SS + R + + +GL Q+ + TKL++++ GS+D A +VF+ +
Sbjct: 42 LLLERC---SSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSK 98
Query: 147 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG 206
+++ + A V ++ L+ + +M + + + +TY+LK C L+ G
Sbjct: 99 LNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEA----ELRVG 154
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 266
KEIH +++ G+ ++ MT L ++YAK ++ A VF MP ++ VSW+ ++ Y++N
Sbjct: 155 KEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 326
M ALE+ M E P+ +T+VSV +HG+ +R G DS++
Sbjct: 215 GMARMALEMVKSMCEENLK--PSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVN 272
Query: 327 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 386
+ AL+ MY +CG + ++FD + +VVSWNS+I Y N K+A+ IF+ M+ +G
Sbjct: 273 ISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEG 332
Query: 387 VSPSYISFITVLCACSHAGLVEEGKIL 413
V P+ +S + L AC+ G +E G+ +
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFI 359
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/474 (25%), Positives = 216/474 (45%), Gaps = 22/474 (4%)
Query: 7 PQHVRQAPFQTHLCYTSHVSSRLPVCFVSINPSANPVKDIKSXXXXXXXQLIQSLCRGGN 66
P + +Q H T VS L + S++ +A + I S +++ + +
Sbjct: 58 PLVFKNGLYQEHFFQTKLVS--LFCRYGSVDEAARVFEPIDSKLNVLYHTMLKGFAKVSD 115
Query: 67 HKQALEVL----WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATK 122
+AL+ + + P L++ C ++ G+++H LV SG D + T
Sbjct: 116 LDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTG 175
Query: 123 LINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSD 182
L NMY + ++ ARKVFD ER + WN + G LE+ + M +
Sbjct: 176 LENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPS 235
Query: 183 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 242
T VL A VS + + GKEIH +R G++ +++ T L+D+YAK G + A
Sbjct: 236 FITIVSVLPA--VSALRL--ISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETAR 291
Query: 243 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 302
+F M +N VSW++MI Y +N+ P +A+ +F +M+ E P V+++
Sbjct: 292 QLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVK--PTDVSVMGALHACAD 349
Query: 303 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 362
+H + GLD + V+N+LI+MY +C E+ +F K+++ +VSWN++
Sbjct: 350 LGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAM 409
Query: 363 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK----ILFESML 418
I + NG A+ F M + V P ++++V+ A + + K ++ S L
Sbjct: 410 ILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCL 469
Query: 419 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
K + +VD+ + + A +LI DM E T W +++ H
Sbjct: 470 DK-----NVFVTTALVDMYAKCGAIMIA-RLIFDMMSERHVTTWNAMIDGYGTH 517
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 129/270 (47%), Gaps = 12/270 (4%)
Query: 203 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 262
L++ ++I + ++G + T L+ ++ ++G + A VF + +K +V + M+
Sbjct: 50 LKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVLYHTMLKG 109
Query: 263 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 322
+AK KAL+ F +M + D P + +HG +++ G
Sbjct: 110 FAKVSDLDKALQFFVRMRYD--DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFS 167
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
+ + L MY +C +++ +VFD++ D+VSWN++++ Y NG + A+++ ++M
Sbjct: 168 LDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSM 227
Query: 383 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY----ACMVDLLG 438
+ + PS+I+ ++VL A S L+ GK + Y + G + +VD+
Sbjct: 228 CEENLKPSFITIVSVLPAVSALRLISVGK-----EIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
+ L+ A +L + M E W S++ +
Sbjct: 283 KCGSLETARQLFDGM-LERNVVSWNSMIDA 311
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 321 bits (823), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 170/510 (33%), Positives = 289/510 (56%), Gaps = 11/510 (2%)
Query: 42 PVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDG 101
PV+D+ S +I C+ GN K+AL + R T+ L+ +C + F+ G
Sbjct: 212 PVRDMGSWNA-----MISGYCQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRG 266
Query: 102 RDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMV 161
+H Y + GL+ + +++ KLI++Y E G L +KVFD R + WN+ +A +
Sbjct: 267 VTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELN 326
Query: 162 GRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG-YEE 220
+ + L+++M S I D T + A ++S+ ++ + + LR G + E
Sbjct: 327 EQPLRAISLFQEMRLSRIQPD--CLTLISLASILSQLG--DIRACRSVQGFTLRKGWFLE 382
Query: 221 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
+I + ++ +YAK G + A +VF +P + +SW+ +I YA+N +A+E+++ M
Sbjct: 383 DITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIME 442
Query: 281 LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGE 340
E + N T VSV +HG +L+ GL + V+ +L MYG+CG
Sbjct: 443 EEG-EIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGR 501
Query: 341 ISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
+ +F ++ + V WN+LI+ +G +G+G+KA+ +F+ M+ +GV P +I+F+T+L A
Sbjct: 502 LEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSA 561
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT 460
CSH+GLV+EG+ FE M + Y I P ++HY CMVD+ GRA +L+ A+K I+ M +P +
Sbjct: 562 CSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDAS 621
Query: 461 VWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMG 520
+WG+LL +CR+H N +L + AS LFE+EP + G +VLL+++YA A W V +R +
Sbjct: 622 IWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAH 681
Query: 521 KRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
+ L+K PG S +EV K+ F + + +P
Sbjct: 682 GKGLRKTPGWSSMEVDNKVEVFYTGNQTHP 711
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/340 (28%), Positives = 166/340 (48%), Gaps = 19/340 (5%)
Query: 69 QALEVLWSERNPSHKTIEV--LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINM 126
AL+ W N S + +V L + C ++ + +H LV S Q+ ++ KL+N+
Sbjct: 39 NALQDCWKNGNESKEIDDVHTLFRYC---TNLQSAKCLHARLVVSKQIQNVCISAKLVNL 95
Query: 127 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQ-MNWSGIPSDRFT 185
Y LG++ AR FD + R +Y WN G E++ + M SG+ D T
Sbjct: 96 YCYLGNVALARHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRT 155
Query: 186 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 245
+ VLKAC + G +IH L+ G+ +++V +L+ +Y+++ + A +F
Sbjct: 156 FPSVLKAC-------RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILF 208
Query: 246 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 305
MP ++ SW+AMI Y ++ +AL L + L A D SVT+VS+
Sbjct: 209 DEMPVRDMGSWNAMISGYCQSGNAKEALTLSNG--LRAMD----SVTVVSLLSACTEAGD 262
Query: 306 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 365
+H + ++ GL+S + V N LI +Y G + ++VFD++ D++SWNS+I
Sbjct: 263 FNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKA 322
Query: 366 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 405
Y N +AI +F+ M + P ++ I++ S G
Sbjct: 323 YELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLG 362
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 320 bits (819), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 175/502 (34%), Positives = 281/502 (55%), Gaps = 9/502 (1%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I L R G+ +AL S R P+ + I++C+ G+ H+ G
Sbjct: 47 VIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFG 106
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
D ++++ LI MY G L+ ARKVFDE +R I W + R + G + + L++
Sbjct: 107 YQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFK 166
Query: 173 QMNWSGIPSDRFTYTYVLK-ACVVSEFSVYPLQKGKE-IHANILRHGYEENIHVMTTLLD 230
+ D + + V+S S P + E IH+ +++ G++ + V TLLD
Sbjct: 167 DLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLD 226
Query: 231 VYAKFG--CISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 288
YAK G ++ A +F + K+ VS+++++ YA++ M +A E+F ++V +
Sbjct: 227 AYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTF- 285
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
N++T+ +V +H ++R GL+ + V ++I MY +CG + + F
Sbjct: 286 NAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAF 345
Query: 349 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
D++KN +V SW ++I+ YG +G+ KA+++F MI GV P+YI+F++VL ACSHAGL
Sbjct: 346 DRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHV 405
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
EG F +M ++ + PG+EHY CMVDLLGRA L +A LI+ M +P +W SLL +
Sbjct: 406 EGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
Query: 469 CRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 528
CRIH N ELAE + A LFEL+ N G Y+LL+ IYA+A W DV+ VR +M R L K P
Sbjct: 466 CRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPP 525
Query: 529 GCSWIEVKKKIYSFVSSEEDNP 550
G S +E+ +++ F+ +E++P
Sbjct: 526 GFSLLELNGEVHVFLIGDEEHP 547
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 316 bits (810), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 169/496 (34%), Positives = 276/496 (55%), Gaps = 9/496 (1%)
Query: 58 IQSLCRGGNHKQAL-EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQD 116
I LC G ++AL E+ + L+ +C K + DG+ VH +++ +
Sbjct: 27 ISQLCSNGRLQEALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPA 86
Query: 117 PYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW 176
YL T+L+ Y + L+ ARKV DE E+ + W A + G E L ++ +M
Sbjct: 87 TYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMR 146
Query: 177 SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG 236
S + FT+ VL +C+ + L GK+IH I++ Y+ +I V ++LLD+YAK G
Sbjct: 147 SDGKPNEFTFATVLTSCIRAS----GLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAG 202
Query: 237 CISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 296
I A +F +P ++ VS +A+I YA+ + +ALE+FH++ E PN VT S+
Sbjct: 203 QIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMS--PNYVTYASL 260
Query: 297 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV 356
H +LRR L + N+LI MY +CG +S R+FD +
Sbjct: 261 LTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTA 320
Query: 357 VSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFE 415
+SWN+++ Y +G G++ +++F M + V P ++ + VL CSH + + G +F+
Sbjct: 321 ISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFD 380
Query: 416 SMLS-KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCN 474
M++ +Y PG EHY C+VD+LGRA R+DEA + I+ MP +P V GSLLG+CR+H +
Sbjct: 381 GMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLS 440
Query: 475 AELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIE 534
++ E L E+EP NAGNYV+L+++YA A W+DV +VR +M ++ + K PG SWI+
Sbjct: 441 VDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Query: 535 VKKKIYSFVSSEEDNP 550
++ ++ F +++ +P
Sbjct: 501 HEQTLHYFHANDRTHP 516
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 314 bits (804), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 166/461 (36%), Positives = 262/461 (56%), Gaps = 10/461 (2%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDS-GLDQDPYLATKLINMYHELGSLDCARKVFDETRER 146
L+ +C S G + ++++ L +P L +KLI ++ LD ARK+FD+ +
Sbjct: 137 LLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVCRRLDLARKIFDDVTDS 196
Query: 147 TIY---IWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
++ +W A + G + L +Y M S I F+ + LKACV + L
Sbjct: 197 SLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACV----DLKDL 252
Query: 204 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 263
+ G+ IHA I++ + + V LL +Y + G A VF M +N V+W+++I
Sbjct: 253 RVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVL 312
Query: 264 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 323
+K + LF +M E + T+ ++ +H IL+
Sbjct: 313 SKKVRVHEMFNLFRKMQEEMIGF--SWATLTTILPACSRVAALLTGKEIHAQILKSKEKP 370
Query: 324 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI 383
+P++N+L+ MYG+CGE+ RVFD + D+ SWN +++ Y NG ++ I +FE MI
Sbjct: 371 DVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMI 430
Query: 384 HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 443
GV+P I+F+ +L CS GL E G LFE M +++R+ P +EHYAC+VD+LGRA ++
Sbjct: 431 ESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKI 490
Query: 444 DEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIY 503
EA+K+IE MPF+P ++WGSLL SCR+H N + E A+ LF LEP N GNYV++++IY
Sbjct: 491 KEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIY 550
Query: 504 AEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 544
A+AKMW +V +R++M +R ++K GCSW++VK KI FV+
Sbjct: 551 ADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVA 591
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 105/400 (26%), Positives = 174/400 (43%), Gaps = 55/400 (13%)
Query: 63 RGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPY 118
R G+ + AL ++L S P + +I V +++C GR +H +V D
Sbjct: 213 RNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQV 272
Query: 119 LATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG 178
+ L+ +Y E G D ARKVFD ER + WN+ L+ R E+ L+R+M
Sbjct: 273 VYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEM 332
Query: 179 IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCI 238
I T T +L AC V L GKEIHA IL+ + ++ ++ +L+D+Y K G +
Sbjct: 333 IGFSWATLTTILPACS----RVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEV 388
Query: 239 SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXX 298
Y+ VF M K+ SW+ M+ CYA N + + LF M+ P+ +T V
Sbjct: 389 EYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGV--APDGITFV---- 442
Query: 299 XXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-----N 353
AL++ G G +F+++K +
Sbjct: 443 -------------------------------ALLSGCSDTGLTEYGLSLFERMKTEFRVS 471
Query: 354 PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 413
P + + L+ + G G K+A+++ E M + PS + ++L +C G V G+I
Sbjct: 472 PALEHYACLVDILGRAGKIKEAVKVIETMPFK---PSASIWGSLLNSCRLHGNVSVGEIA 528
Query: 414 FESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
+ + +PG +Y + ++ A D K+ E M
Sbjct: 529 AKELFVLEPHNPG--NYVMVSNIYADAKMWDNVDKIREMM 566
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 313 bits (803), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 163/464 (35%), Positives = 260/464 (56%), Gaps = 7/464 (1%)
Query: 87 VLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRER 146
L++ C GR VH +++ S D + L+NMY + GSL+ ARKVF++ +R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 147 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG 206
W + R + L + QM G + FT + V+KA G
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC----G 180
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 266
++H ++ G++ N+HV + LLD+Y ++G + A VF A+ ++N VSW+A+I +A+
Sbjct: 181 HQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARR 240
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 326
KALELF M+ + P+ + S+ VH ++++ G +
Sbjct: 241 SGTEKALELFQGMLRDGFR--PSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 327 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 386
N L+ MY + G I ++FD++ DVVSWNSL++ Y +G+GK+A+ FE M G
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 387 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 446
+ P+ ISF++VL ACSH+GL++EG +E ++ K I P HY +VDLLGRA L+ A
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYE-LMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 447 IKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEA 506
++ IE+MP EP +W +LL +CR+H N EL A+ +FEL+P + G +V+L +IYA
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 507 KMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
W+D VRK M + ++K P CSW+E++ I+ FV+++E +P
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHP 521
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 93/300 (31%), Positives = 160/300 (53%), Gaps = 16/300 (5%)
Query: 177 SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG 236
S IP+DR Y +LK C V + L +G+ +HA+IL+ + +I + TLL++YAK G
Sbjct: 54 SYIPADRRFYNTLLKKCTVFKL----LIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCG 109
Query: 237 CISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 296
+ A VF MP ++ V+W+ +I Y+++D P AL F+QM+ PN T+ SV
Sbjct: 110 SLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYS--PNEFTLSSV 167
Query: 297 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV 356
+HGF ++ G DS + V +AL+ +Y R G + + VFD +++ +
Sbjct: 168 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRND 227
Query: 357 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFES 416
VSWN+LI+ + +KA+++F+ M+ G PS+ S+ ++ ACS G +E+GK
Sbjct: 228 VSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGK----- 282
Query: 417 MLSKYRIHPGMEHYA----CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
+ Y I G + A ++D+ ++ + +A K+ + + + W SLL + H
Sbjct: 283 WVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQH 341
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 143/307 (46%), Gaps = 11/307 (3%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
+P+ T+ +I++ A + G +H + V G D + ++ + L+++Y G +D A+
Sbjct: 158 SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
VFD R WNA A E+ LEL++ M G F+Y + AC + F
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
L++GK +HA +++ G + TLLD+YAK G I A +F + ++ VSW++
Sbjct: 278 ----LEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNS 333
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
++ YA++ +A+ F +M PN ++ +SV + + +
Sbjct: 334 LLTAYAQHGFGKEAVWWFEEM--RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK 391
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLIS---MYGNNGYGKK 374
G+ ++ + GR G+++ R +++ P W +L++ M+ N G
Sbjct: 392 DGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAY 451
Query: 375 AIQ-IFE 380
A + +FE
Sbjct: 452 AAEHVFE 458
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 10/241 (4%)
Query: 57 LIQSLCRGGNHKQALEV----LWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI R ++ALE+ L PSH + L +C+ G+ VH Y++ SG
Sbjct: 233 LIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 292
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ L++MY + GS+ ARK+FD +R + WN+ A A G G+E + +
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+M GI + ++ VL AC S L +G + + + G T++D+
Sbjct: 353 EMRRVGIRPNEISFLSVLTACSHSGL----LDEGWHYYELMKKDGIVPEAWHYVTVVDLL 408
Query: 233 AKFGCISYANSVFRAMPAKNSVS-WSAMI-GCYAKNDMPVKALELFHQMVLEACDSIPNS 290
+ G ++ A MP + + + W A++ C + + A H L+ D P+
Sbjct: 409 GRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHV 468
Query: 291 V 291
+
Sbjct: 469 I 469
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 313 bits (801), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/502 (34%), Positives = 264/502 (52%), Gaps = 36/502 (7%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T LI++ A+ SS S G+ +H V S + D ++A LI+ Y G LD A KV
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F +E+ + WN+ G ++ LEL+++M + + T VL AC
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACA----K 244
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM----------- 248
+ L+ G+++ + I + N+ + +LD+Y K G I A +F AM
Sbjct: 245 IRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTM 304
Query: 249 --------------------PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 288
P K+ V+W+A+I Y +N P +AL +FH++ L+ +
Sbjct: 305 LDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKL- 363
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
N +T+VS +H +I + G+ V +ALI MY +CG++ VF
Sbjct: 364 NQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVF 423
Query: 349 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
+ V+ DV W+++I +G G +A+ +F M V P+ ++F V CACSH GLV+
Sbjct: 424 NSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVD 483
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
E + LF M S Y I P +HYAC+VD+LGR+ L++A+K IE MP P +VWG+LLG+
Sbjct: 484 EAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGA 543
Query: 469 CRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 528
C+IH N LAE A L ELEP N G +VLL++IYA+ W +V +RK M L+K P
Sbjct: 544 CKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEP 603
Query: 529 GCSWIEVKKKIYSFVSSEEDNP 550
GCS IE+ I+ F+S + +P
Sbjct: 604 GCSSIEIDGMIHEFLSGDNAHP 625
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 206/455 (45%), Gaps = 56/455 (12%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINM--YHELGSLDCARKVFDETRE 145
LI+ C S + H +++ +G DPY A+KL M SL+ ARKVFDE +
Sbjct: 36 LIERCV---SLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPK 92
Query: 146 RTIYIWNAFFRALAMVGRGEELLELYRQMNW---SGIPSDRFTYTYVLKACVVSEFSVYP 202
+ WN RA A + +L ++ ++ S +++T+ +++KA V
Sbjct: 93 PNSFAWNTLIRAYA--SGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAA----EVSS 146
Query: 203 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 262
L G+ +H ++ ++ V +L+ Y G + A VF + K+ VSW++MI
Sbjct: 147 LSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMING 206
Query: 263 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 322
+ + P KALELF +M E+ D + VTMV V V +I ++
Sbjct: 207 FVQKGSPDKALELFKKM--ESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN 264
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVK------------------------------ 352
+ + NA++ MY +CG I +R+FD ++
Sbjct: 265 VNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSM 324
Query: 353 -NPDVVSWNSLISMYGNNGYGKKAIQIFENM-IHQGVSPSYISFITVLCACSHAGLVEEG 410
D+V+WN+LIS Y NG +A+ +F + + + + + I+ ++ L AC+ G +E G
Sbjct: 325 PQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG 384
Query: 411 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCR 470
+ + S + K+ I + ++ + + L+++ ++ + + VW +++G
Sbjct: 385 RWI-HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLA 442
Query: 471 IH-CNAELAERASAMLFELEPWNAG-NYVLLADIY 503
+H C E A M ++++ N N V +++
Sbjct: 443 MHGCGNE----AVDMFYKMQEANVKPNGVTFTNVF 473
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 157/335 (46%), Gaps = 19/335 (5%)
Query: 168 LELYRQMNWSG-----IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENI 222
L L R N+S ++R + +++ CV L++ K+ H +++R G +
Sbjct: 10 LSLPRHPNFSNPNQPTTNNERSRHISLIERCV-------SLRQLKQTHGHMIRTGTFSDP 62
Query: 223 HVMTTLLDVYA--KFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
+ + L + A F + YA VF +P NS +W+ +I YA PV ++ F MV
Sbjct: 63 YSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASGPDPVLSIWAFLDMV 122
Query: 281 LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGE 340
E+ PN T + +HG ++ + S + V N+LI Y CG+
Sbjct: 123 SES-QCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD 181
Query: 341 ISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
+ +VF +K DVVSWNS+I+ + G KA+++F+ M + V S+++ + VL A
Sbjct: 182 LDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSA 241
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT 460
C+ +E G+ + S + + R++ + M+D+ + +++A +L + M E
Sbjct: 242 CAKIRNLEFGRQVC-SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAME-EKDNV 299
Query: 461 VWGSLLGSCRIHCNAELAERA--SAMLFELEPWNA 493
W ++L I + E A S ++ WNA
Sbjct: 300 TWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 311 bits (798), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 257/467 (55%), Gaps = 6/467 (1%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T +++++C + SS G D+H +V G + D T L+++Y G L+ A K+FDE
Sbjct: 113 TFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEI 172
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
+R++ W A F GR E ++L+++M G+ D + VL ACV V L
Sbjct: 173 PDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACV----HVGDL 228
Query: 204 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 263
G+ I + ++N V TTL+++YAK G + A SVF +M K+ V+WS MI Y
Sbjct: 229 DSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGY 288
Query: 264 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 323
A N P + +ELF QM+ E P+ ++V I R +
Sbjct: 289 ASNSFPKEGIELFLQMLQENLK--PDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLT 346
Query: 324 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI 383
+ + NALI MY +CG ++ G VF ++K D+V N+ IS NG+ K + +F
Sbjct: 347 NLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTE 406
Query: 384 HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 443
G+SP +F+ +LC C HAGL+++G F ++ Y + +EHY CMVDL GRA L
Sbjct: 407 KLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGML 466
Query: 444 DEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIY 503
D+A +LI DMP P VWG+LL CR+ + +LAE L LEPWNAGNYV L++IY
Sbjct: 467 DDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIY 526
Query: 504 AEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
+ W + VR +M K+ ++K+PG SWIE++ K++ F++ ++ +P
Sbjct: 527 SVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHP 573
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 165/352 (46%), Gaps = 7/352 (1%)
Query: 102 RDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMV 161
+ +H L++ L D +L L+ + +F T+ I+++N+
Sbjct: 30 KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFPNIFLYNSLINGFVNN 89
Query: 162 GRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN 221
E L+L+ + G+ FT+ VLKAC + + G ++H+ +++ G+ +
Sbjct: 90 HLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRAS----SRKLGIDLHSLVVKCGFNHD 145
Query: 222 IHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 281
+ MT+LL +Y+ G ++ A+ +F +P ++ V+W+A+ Y + +A++LF +MV
Sbjct: 146 VAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVE 205
Query: 282 EACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI 341
P+S +V V + ++ + V L+ +Y +CG++
Sbjct: 206 MGVK--PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKM 263
Query: 342 SIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCAC 401
VFD + D+V+W+++I Y +N + K+ I++F M+ + + P S + L +C
Sbjct: 264 EKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSC 323
Query: 402 SHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
+ G ++ G+ S++ ++ + ++D+ + + ++ ++M
Sbjct: 324 ASLGALDLGEWGI-SLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEM 374
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 142/346 (41%), Gaps = 34/346 (9%)
Query: 36 INPSANPVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWS----ERNPSHKTIEVLIQS 91
+N + +I L G H++A+++ P I ++ +
Sbjct: 162 LNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSA 221
Query: 92 CAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIW 151
C G + +Y+ + + ++ ++ T L+N+Y + G ++ AR VFD E+ I W
Sbjct: 222 CVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTW 281
Query: 152 NAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHA 211
+ + A +E +EL+ QM + D+F+ L +C S+ L G+ +
Sbjct: 282 STMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCA----SLGALDLGEWGIS 337
Query: 212 NILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVK 271
I RH + N+ + L+D+YAK G ++ VF+ M K+ V +A I AKN
Sbjct: 338 LIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKL 397
Query: 272 ALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV---- 327
+ +F Q E P+ T + + VH +++ GL +
Sbjct: 398 SFAVFGQT--EKLGISPDGSTFLGL-----------LCGCVHAGLIQDGLRFFNAISCVY 444
Query: 328 --------INALITMYGRCGEISIGERVF-DKVKNPDVVSWNSLIS 364
++ ++GR G + R+ D P+ + W +L+S
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLS 490
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 311 bits (797), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 168/477 (35%), Positives = 266/477 (55%), Gaps = 15/477 (3%)
Query: 74 LWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSL 133
LW++ T LI+ C + +G + R+L +G +L LINMY + L
Sbjct: 57 LWADS----ATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLL 112
Query: 134 DCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC 193
+ A ++FD+ +R + W A + ++ LEL M + + +TY+ VL++C
Sbjct: 113 NDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSC 172
Query: 194 VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS 253
+ + +H I++ G E ++ V + L+DV+AK G A SVF M ++
Sbjct: 173 -------NGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDA 225
Query: 254 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 313
+ W+++IG +A+N ALELF +M + I T+ SV H
Sbjct: 226 IVWNSIIGGFAQNSRSDVALELFKRM--KRAGFIAEQATLTSVLRACTGLALLELGMQAH 283
Query: 314 GFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 373
I++ D I+ NAL+ MY +CG + RVF+++K DV++W+++IS NGY +
Sbjct: 284 VHIVKYDQDLILN--NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQ 341
Query: 374 KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACM 433
+A+++FE M G P+YI+ + VL ACSHAGL+E+G F SM Y I P EHY CM
Sbjct: 342 EALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCM 401
Query: 434 VDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNA 493
+DLLG+A +LD+A+KL+ +M EP W +LLG+CR+ N LAE A+ + L+P +A
Sbjct: 402 IDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDA 461
Query: 494 GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
G Y LL++IYA ++ W V+ +R M R ++K PGCSWIEV K+I++F+ + +P
Sbjct: 462 GTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHP 518
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/516 (33%), Positives = 270/516 (52%), Gaps = 42/516 (8%)
Query: 71 LEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL 130
+E+ S R P H +++SC G VH ++V G+D D Y L+NMY +L
Sbjct: 94 VEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKL 153
Query: 131 ---GS---------------------------------LDCARKVFDETRERTIYIWNAF 154
GS +D R+VF+ + + +N
Sbjct: 154 LGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTI 213
Query: 155 FRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL 214
A G E+ L + R+M + + D FT + VL + SE+ + KGKEIH ++
Sbjct: 214 IAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLP--IFSEY--VDVIKGKEIHGYVI 269
Query: 215 RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALE 274
R G + ++++ ++L+D+YAK I + VF + ++ +SW++++ Y +N +AL
Sbjct: 270 RKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALR 329
Query: 275 LFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITM 334
LF QMV P +V SV +HG++LR G S + + +AL+ M
Sbjct: 330 LFRQMVTAKVK--PGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDM 387
Query: 335 YGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISF 394
Y +CG I ++FD++ D VSW ++I + +G+G +A+ +FE M QGV P+ ++F
Sbjct: 388 YSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAF 447
Query: 395 ITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 454
+ VL ACSH GLV+E F SM Y ++ +EHYA + DLLGRA +L+EA I M
Sbjct: 448 VAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMC 507
Query: 455 FEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKS 514
EP +VW +LL SC +H N ELAE+ + +F ++ N G YVL+ ++YA W ++
Sbjct: 508 VEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAK 567
Query: 515 VRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
+R M K+ L+K P CSWIE+K K + FVS + +P
Sbjct: 568 LRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHP 603
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 15/259 (5%)
Query: 42 PVKDIKSXXXXXXXQLIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSS 97
P KD+ S +I + G ++ AL E+ ++ P T+ ++ ++
Sbjct: 203 PRKDVVSYNT-----IIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVD 257
Query: 98 FSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRA 157
G+++H Y++ G+D D Y+ + L++MY + ++ + +VF R WN+
Sbjct: 258 VIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAG 317
Query: 158 LAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG 217
GR E L L+RQM + + ++ V+ AC + L GK++H +LR G
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACA----HLATLHLGKQLHGYVLRGG 373
Query: 218 YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFH 277
+ NI + + L+D+Y+K G I A +F M + VSW+A+I +A + +A+ LF
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFE 433
Query: 278 QMVLEACDSIPNSVTMVSV 296
+M + PN V V+V
Sbjct: 434 EMKRQGVK--PNQVAFVAV 450
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 4/141 (2%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L+ + G + +AL +++ ++ P +I +CA ++ G+ +H Y++ G
Sbjct: 314 LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ ++A+ L++MY + G++ ARK+FD W A A+ G G E + L+
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFE 433
Query: 173 QMNWSGIPSDRFTYTYVLKAC 193
+M G+ ++ + VL AC
Sbjct: 434 EMKRQGVKPNQVAFVAVLTAC 454
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 132/319 (41%), Gaps = 49/319 (15%)
Query: 189 VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM 248
++K + + + + K++HA +R + + ++ +Y + A +F+ +
Sbjct: 7 LIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTL 65
Query: 249 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 308
+ ++W ++I C+ + KAL F +M A P+ SV
Sbjct: 66 KSPPVLAWKSVIRCFTDQSLFSKALASFVEM--RASGRCPDHNVFPSVLKSCTMMMDLRF 123
Query: 309 XXXVHGFILRRGLDSIMPVINALITMY----GRCGEISIG-------------------- 344
VHGFI+R G+D + NAL+ MY G +IS+G
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKA 183
Query: 345 ------------ERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYI 392
RVF+ + DVVS+N++I+ Y +G + A+++ M + P
Sbjct: 184 ETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSF 243
Query: 393 SFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH----YACMVDLLGRANRLDEAIK 448
+ +VL S V +GK + Y I G++ + +VD+ ++ R++++ +
Sbjct: 244 TLSSVLPIFSEYVDVIKGK-----EIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSER 298
Query: 449 LIEDMPFEPGPTVWGSLLG 467
+ + G + W SL+
Sbjct: 299 VFSRLYCRDGIS-WNSLVA 316
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/479 (33%), Positives = 270/479 (56%), Gaps = 8/479 (1%)
Query: 73 VLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGS 132
+L S +P + +++SCA S G+ +H ++ G + +P++ T LI+MY + G
Sbjct: 44 MLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGL 103
Query: 133 LDCARKVFDETRERT--IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
+ ARKVF+E + + +NA + + ++R+M +G+ D T ++
Sbjct: 104 VADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLV 163
Query: 191 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 250
C V E+ L G+ +H ++ G + + V+ + + +Y K G + +F MP
Sbjct: 164 PLCTVPEY----LWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPV 219
Query: 251 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 310
K ++W+A+I Y++N + LEL+ QM ++ P+ T+VSV
Sbjct: 220 KGLITWNAVISGYSQNGLAYDVLELYEQM--KSSGVCPDPFTLVSVLSSCAHLGAKKIGH 277
Query: 311 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 370
V + G + V NA I+MY RCG ++ VFD + +VSW ++I YG +G
Sbjct: 278 EVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHG 337
Query: 371 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 430
G+ + +F++MI +G+ P F+ VL ACSH+GL ++G LF +M +Y++ PG EHY
Sbjct: 338 MGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHY 397
Query: 431 ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEP 490
+C+VDLLGRA RLDEA++ IE MP EP VWG+LLG+C+IH N ++AE A A + E EP
Sbjct: 398 SCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEP 457
Query: 491 WNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDN 549
N G YVL+++IY+++K + +R +M +R +K PG S++E K +++ F++ + +
Sbjct: 458 NNIGYYVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSH 516
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 167/339 (49%), Gaps = 14/339 (4%)
Query: 151 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 210
WN R LA E + LYR M SG D F++ ++LK+C V G+++H
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPV----SGQQLH 76
Query: 211 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN--SVSWSAMIGCYAKNDM 268
++ + G E V+T L+ +Y K G ++ A VF P + SV ++A+I Y N
Sbjct: 77 CHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSK 136
Query: 269 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI 328
A +F +M E S+ +SVTM+ + +HG ++ GLDS + V+
Sbjct: 137 VTDAAYMFRRMK-ETGVSV-DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVL 194
Query: 329 NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 388
N+ ITMY +CG + G R+FD++ +++WN++IS Y NG ++++E M GV
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 389 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 448
P + ++VL +C+H G + G + + + S + P + + + R L +A
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV-PNVFVSNASISMYARCGNLAKARA 313
Query: 449 LIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFE 487
+ + MP + W +++G +H E+ MLF+
Sbjct: 314 VFDIMPVK-SLVSWTAMIGCYGMHGMGEIG----LMLFD 347
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 308 bits (789), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 175/488 (35%), Positives = 263/488 (53%), Gaps = 14/488 (2%)
Query: 67 HKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATK 122
HK+A+E+ S P ++ SCA + G VH Y + + L D Y+
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS 390
Query: 123 LINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEEL---LELYRQMNWSGI 179
LI+MY + L ARKVFD + ++NA + +G EL L ++R M + I
Sbjct: 391 LIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI 450
Query: 180 PSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS 239
T+ +L+A S+ L K+IH + ++G +I + L+DVY+ C+
Sbjct: 451 RPSLLTFVSLLRASA----SLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 506
Query: 240 YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX 299
+ VF M K+ V W++M Y + +AL LF + L+ P+ T ++
Sbjct: 507 DSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLF--LELQLSRERPDEFTFANMVTA 564
Query: 300 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 359
H +L+RGL+ + NAL+ MY +CG + FD + DVV W
Sbjct: 565 AGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCW 624
Query: 360 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 419
NS+IS Y N+G GKKA+Q+ E M+ +G+ P+YI+F+ VL ACSHAGLVE+G FE ML
Sbjct: 625 NSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELML- 683
Query: 420 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAE 479
++ I P EHY CMV LLGRA RL++A +LIE MP +P VW SLL C N ELAE
Sbjct: 684 RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAE 743
Query: 480 RASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKI 539
A+ M +P ++G++ +L++IYA MW++ K VR+ M + K PG SWI + K++
Sbjct: 744 HAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEV 803
Query: 540 YSFVSSEE 547
+ F+S ++
Sbjct: 804 HIFLSKDK 811
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/382 (30%), Positives = 185/382 (48%), Gaps = 31/382 (8%)
Query: 74 LWSER--NPSHKTIEVLIQSCAQKSSFSDGR------DVHRYLVDSGLDQDPYLATKLIN 125
W R +P+ + IQ+C S DGR + +LV SG D+D Y+ T LI+
Sbjct: 136 FWRTRKDSPNEYILSSFIQAC----SGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLID 191
Query: 126 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 185
Y + G++D AR VFD E++ W +GR L+L+ Q+ + D +
Sbjct: 192 FYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYI 251
Query: 186 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 245
+ VL AC + F L+ GK+IHA+ILR+G E + +M L+D Y K G + A+ +F
Sbjct: 252 LSTVLSACSILPF----LEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLF 307
Query: 246 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 305
MP KN +SW+ ++ Y +N + +A+ELF M P+ S+
Sbjct: 308 NGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLK--PDMYACSSILTSCASLHA 365
Query: 306 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 365
VH + ++ L + V N+LI MY +C ++ +VFD DVV +N++I
Sbjct: 366 LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEG 425
Query: 366 YGNNGYG---KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 422
Y G +A+ IF +M + + PS ++F+++L A A L G LSK +
Sbjct: 426 YSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS--ASLTSLG-------LSK-Q 475
Query: 423 IHPGMEHYACMVDLLGRANRLD 444
IH M Y +D+ + +D
Sbjct: 476 IHGLMFKYGLNLDIFAGSALID 497
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 183/362 (50%), Gaps = 32/362 (8%)
Query: 104 VHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGR 163
VH ++ GL+ D YL+ LIN+Y G + ARKVF++ ER + W+ A G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 164 GEE----LLELYRQMNWSGIPSDRFTYTYVLKACV----VSEFSVYPLQKGKEIHANILR 215
EE LE +R S P++ +++ +AC + V+ LQ + +++
Sbjct: 126 YEESLVVFLEFWRTRKDS--PNEYILSSFI-QACSGLDGRGRWMVFQLQ------SFLVK 176
Query: 216 HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALEL 275
G++ +++V T L+D Y K G I YA VF A+P K++V+W+ MI K +L+L
Sbjct: 177 SGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQL 236
Query: 276 FHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMY 335
F+Q++ + + +P+ + +V +H ILR GL+ ++N LI Y
Sbjct: 237 FYQLMED--NVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSY 294
Query: 336 GRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 395
+CG + ++F+ + N +++SW +L+S Y N K+A+++F +M G+ P +
Sbjct: 295 VKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACS 354
Query: 396 TVLCACS--HAGLVEEGKILFESMLSKYRIHP--GMEHYAC--MVDLLGRANRLDEAIKL 449
++L +C+ HA + F + + Y I G + Y ++D+ + + L +A K+
Sbjct: 355 SILTSCASLHA-------LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 450 IE 451
+
Sbjct: 408 FD 409
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 306 bits (784), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 179/544 (32%), Positives = 281/544 (51%), Gaps = 54/544 (9%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN-----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
+I+S + G K ALE+ N P + T+ ++ CA + S G+ +H + V S
Sbjct: 199 IIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTS 258
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
+ Q+ ++ L++MY + G +D A VF + + WNA + +GR E+ + L+
Sbjct: 259 EMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 172 -----------------------------------RQMNWSGIPSDRFTYTYVLKACVVS 196
RQM SGI + T VL C
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCA-- 376
Query: 197 EFSVYPLQKGKEIHA-------NILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
SV L GKEIH ++ ++G+ + V+ L+D+YAK + A ++F ++
Sbjct: 377 --SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLS 434
Query: 250 AK--NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 307
K + V+W+ MIG Y+++ KALEL +M E C + PN+ T+
Sbjct: 435 PKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALR 494
Query: 308 XXXXVHGFILRRGLDSI-MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 366
+H + LR +++ + V N LI MY +CG IS VFD + + V+W SL++ Y
Sbjct: 495 IGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGY 554
Query: 367 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 426
G +GYG++A+ IF+ M G ++ + VL ACSH+G++++G F M + + + PG
Sbjct: 555 GMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPG 614
Query: 427 MEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLF 486
EHYAC+VDLLGRA RL+ A++LIE+MP EP P VW + L CRIH EL E A+ +
Sbjct: 615 PEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKIT 674
Query: 487 ELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 546
EL + G+Y LL+++YA A W DV +R LM + ++K PGCSW+E K +F +
Sbjct: 675 ELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGD 734
Query: 547 EDNP 550
+ +P
Sbjct: 735 KTHP 738
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/445 (24%), Positives = 186/445 (41%), Gaps = 50/445 (11%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
P + T + ++C + SS G H + +G + ++ L+ MY SL ARK
Sbjct: 124 TPDNYTFPFVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARK 183
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRFTYTYVLKACVVSE 197
VFDE + WN+ + A +G+ + LE++ +M N G D T VL C +
Sbjct: 184 VFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPC--AS 241
Query: 198 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
+ L GK++H + +N+ V L+D+YAK G + AN+VF M K+ VSW+
Sbjct: 242 LGTHSL--GKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWN 299
Query: 258 AMIGCYAKNDMPVKALELFHQM---------------------------VLEACDSI--- 287
AM+ Y++ A+ LF +M L C +
Sbjct: 300 AMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSS 359
Query: 288 ---PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD-------SIMPVINALITMYGR 337
PN VT++SV +H + ++ +D VIN LI MY +
Sbjct: 360 GIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAK 419
Query: 338 CGEISIGERVFDKV--KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG--VSPSYIS 393
C ++ +FD + K DVV+W +I Y +G KA+++ M + P+ +
Sbjct: 420 CKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFT 479
Query: 394 FITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
L AC+ + GK + L + + C++D+ + + +A +L+ D
Sbjct: 480 ISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDA-RLVFDN 538
Query: 454 PFEPGPTVWGSLLGSCRIHCNAELA 478
W SL+ +H E A
Sbjct: 539 MMAKNEVTWTSLMTGYGMHGYGEEA 563
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 191/437 (43%), Gaps = 54/437 (12%)
Query: 97 SFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDE--TRERTIYIWNAF 154
+ S + +H+ L+ G+ L + LI+ Y +G L A + + +Y WN+
Sbjct: 40 TISQVKLIHQKLLSFGI-LTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSL 98
Query: 155 FRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL 214
R+ G + L L+ M+ D +T+ +V KAC E S ++ G+ HA L
Sbjct: 99 IRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKAC--GEIS--SVRCGESAHALSL 154
Query: 215 RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALE 274
G+ N+ V L+ +Y++ +S A VF M + VSW+++I YAK P ALE
Sbjct: 155 VTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALE 214
Query: 275 LFHQMVLE-ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 333
+F +M E C P+++T+V+V +H F + + M V N L+
Sbjct: 215 MFSRMTNEFGCR--PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVD 272
Query: 334 MYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFE------------- 380
MY +CG + VF + DVVSWN++++ Y G + A+++FE
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 381 ----------------------NMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 418
M+ G+ P+ ++ I+VL C+ G + GK + +
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 419 SKYRIH-----PGMEHYAC--MVDLLGRANRLDEAIKLIEDM-PFEPGPTVWGSLLGSCR 470
KY I G E+ ++D+ + ++D A + + + P E W ++G
Sbjct: 393 -KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYS 451
Query: 471 IHCNAELAERASAMLFE 487
H +A A + +FE
Sbjct: 452 QHGDANKALELLSEMFE 468
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 169/523 (32%), Positives = 276/523 (52%), Gaps = 30/523 (5%)
Query: 56 QLIQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQ 115
+ I LC ++A+++L + P T LIQ C+Q + +G+ VH ++ SG
Sbjct: 59 EAIDVLCGQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVP 118
Query: 116 DPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM- 174
+ +L+ MY + GSL ARKVFDE R + WN A VG EE +L+ +M
Sbjct: 119 GIVIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMT 178
Query: 175 -----NWSGI---------PSDRFTYTYVLKACVVSEFSVYP-------------LQKGK 207
+W+ + P + +++ S +++ +++GK
Sbjct: 179 EKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGK 238
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
EIH +I+R G + + + ++L+D+Y K GCI A ++F + K+ VSW++MI Y K+
Sbjct: 239 EIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSS 298
Query: 268 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV 327
+ LF ++V +C+ PN T V VHG++ R G D
Sbjct: 299 RWREGFSLFSELV-GSCER-PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFA 356
Query: 328 INALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV 387
++L+ MY +CG I + V D PD+VSW SLI NG +A++ F+ ++ G
Sbjct: 357 SSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGT 416
Query: 388 SPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAI 447
P +++F+ VL AC+HAGLVE+G F S+ K+R+ +HY C+VDLL R+ R ++
Sbjct: 417 KPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLK 476
Query: 448 KLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAK 507
+I +MP +P +W S+LG C + N +LAE A+ LF++EP N YV +A+IYA A
Sbjct: 477 SVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAG 536
Query: 508 MWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
W + +RK M + + K PG SW E+K+K + F++++ +P
Sbjct: 537 KWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSHP 579
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 305 bits (781), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 270/479 (56%), Gaps = 16/479 (3%)
Query: 75 WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLD 134
+S RN H+ ++Q CA+ + + + H ++ L+ D L LIN Y + G ++
Sbjct: 58 FSNRNLVHE----ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVE 113
Query: 135 CARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACV 194
AR+VFD ER++ WN E L+++ +M G FT + VL AC
Sbjct: 114 LARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACG 173
Query: 195 VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 254
V+ ++ + K++H ++ + N++V T LLD+YAK G I A VF +M K+SV
Sbjct: 174 VNCDAL----ECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSV 229
Query: 255 SWSAMIGCYAKNDMPVKALELF---HQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
+WS+M+ Y +N +AL L+ +M LE N T+ SV
Sbjct: 230 TWSSMVAGYVQNKNYEEALLLYRRAQRMSLE-----QNQFTLSSVICACSNLAALIEGKQ 284
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 371
+H I + G S + V ++ + MY +CG + +F +V+ ++ WN++IS + +
Sbjct: 285 MHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHAR 344
Query: 372 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
K+ + +FE M G+ P+ ++F ++L C H GLVEEG+ F+ M + Y + P + HY+
Sbjct: 345 PKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYS 404
Query: 432 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPW 491
CMVD+LGRA L EA +LI+ +PF+P ++WGSLL SCR++ N ELAE A+ LFELEP
Sbjct: 405 CMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPE 464
Query: 492 NAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
NAGN+VLL++IYA K W ++ RKL+ ++KV G SWI++K K+++F E +P
Sbjct: 465 NAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHP 523
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 305 bits (780), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 171/498 (34%), Positives = 264/498 (53%), Gaps = 43/498 (8%)
Query: 57 LIQSLCRGGNHKQALEVLWS----ERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I+S G + + ++V + P H T ++++C+ + GR +H G
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
L ++ L++MY + G L AR V DE R + WN+ A R ++ LE+ R
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+M I D T +L A + + EN+
Sbjct: 231 EMESVKISHDAGTMASLLPA---------------------VSNTTTENVM--------- 260
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
Y +F M K+ VSW+ MIG Y KN MPV+A+EL+ +M EA P++V+
Sbjct: 261 -------YVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRM--EADGFEPDAVS 311
Query: 293 MVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK 352
+ SV +HG+I R+ L + + NALI MY +CG + VF+ +K
Sbjct: 312 ITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMK 371
Query: 353 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 412
+ DVVSW ++IS YG +G G A+ +F + G+ P I+F+T L ACSHAGL+EEG+
Sbjct: 372 SRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRS 431
Query: 413 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
F+ M Y+I P +EH ACMVDLLGRA ++ EA + I+DM EP VWG+LLG+CR+H
Sbjct: 432 CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVH 491
Query: 473 CNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSW 532
+ ++ A+ LF+L P +G YVLL++IYA+A W +V ++R +M + L+K PG S
Sbjct: 492 SDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASN 551
Query: 533 IEVKKKIYSFVSSEEDNP 550
+EV + I++F+ + +P
Sbjct: 552 VEVNRIIHTFLVGDRSHP 569
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 9/276 (3%)
Query: 198 FSVYP-LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 256
YP ++ + +H+ I+ N + L+ YA ++ A VF +P +N +
Sbjct: 49 LDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIII 108
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
+ MI Y N + +++F M C+ P+ T V +HG
Sbjct: 109 NVMIRSYVNNGFYGEGVKVFGTMC--GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA 166
Query: 317 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 376
+ GL S + V N L++MYG+CG +S V D++ DVVSWNSL+ Y N A+
Sbjct: 167 TKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDAL 226
Query: 377 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 436
++ M +S + ++L A S+ E + + M K + + M+ +
Sbjct: 227 EVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMG-KKSLVSWNVMIGV 283
Query: 437 LGRANRLDEAIKLIEDMP---FEPGPTVWGSLLGSC 469
+ EA++L M FEP S+L +C
Sbjct: 284 YMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 168/501 (33%), Positives = 277/501 (55%), Gaps = 13/501 (2%)
Query: 57 LIQSLCRGGNHKQALE-----VLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
++ + G+ QA+E V+ S+ P T+ L+ +C + S+ GR VH +++
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
G D L L+N Y + + A +F E+ + W+ G E L ++
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
M G + T VL+AC + + L++G++ H +R G E + V T L+D+
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAA----HDLEQGRKTHELAIRKGLETEVKVSTALVDM 308
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSV 291
Y K A +VF +P K+ VSW A+I + N M +++E F M+LE ++ P+++
Sbjct: 309 YMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLEN-NTRPDAI 367
Query: 292 TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINA-LITMYGRCGEISIGERVFDK 350
MV V H ++++ G DS P I A L+ +Y RCG + +VF+
Sbjct: 368 LMVKVLGSCSELGFLEQAKCFHSYVIKYGFDS-NPFIGASLVELYSRCGSLGNASKVFNG 426
Query: 351 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEE 409
+ D V W SLI+ YG +G G KA++ F +M+ V P+ ++F+++L ACSHAGL+ E
Sbjct: 427 IALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHE 486
Query: 410 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
G +F+ M++ YR+ P +EHYA +VDLLGR LD AI++ + MPF P P + G+LLG+C
Sbjct: 487 GLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGAC 546
Query: 470 RIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPG 529
RIH N E+AE + LFELE +AG Y+L++++Y W +V+ +R + +R ++K
Sbjct: 547 RIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLA 606
Query: 530 CSWIEVKKKIYSFVSSEEDNP 550
S IE+++K++ FV+ +E +P
Sbjct: 607 ESLIEIRRKVHRFVADDELHP 627
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 120/426 (28%), Positives = 203/426 (47%), Gaps = 21/426 (4%)
Query: 57 LIQSLCRGGNHKQALEVLW-------SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLV 109
L++SL R KQ EVL+ E P + T+ V +++C + + G +H ++
Sbjct: 31 LLKSLSR---EKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFVK 87
Query: 110 -DSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELL 168
D L D Y+ + LI MY + G + A ++FDE + I W++ G + +
Sbjct: 88 KDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSMVSGFEKNGSPYQAV 147
Query: 169 ELYRQMNW-SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
E +R+M S + DR T ++ AC S + G+ +H ++R G+ ++ ++ +
Sbjct: 148 EFFRRMVMASDVTPDRVTLITLVSACTKLSNS----RLGRCVHGFVIRRGFSNDLSLVNS 203
Query: 228 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 287
LL+ YAK A ++F+ + K+ +SWS +I CY +N +AL +F+ M+ + +
Sbjct: 204 LLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTE-- 261
Query: 288 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 347
PN T++ V H +R+GL++ + V AL+ MY +C V
Sbjct: 262 PNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAV 321
Query: 348 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM-IHQGVSPSYISFITVLCACSHAGL 406
F ++ DVVSW +LIS + NG ++I+ F M + P I + VL +CS G
Sbjct: 322 FSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGF 381
Query: 407 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
+E+ K F S + KY A +V+L R L A K+ + + VW SL+
Sbjct: 382 LEQAKC-FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKD-TVVWTSLI 439
Query: 467 GSCRIH 472
IH
Sbjct: 440 TGYGIH 445
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 176/354 (49%), Gaps = 9/354 (2%)
Query: 136 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 195
AR++F E +R++Y WN ++L+ + EE+L + M D FT LKAC
Sbjct: 13 ARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACG- 71
Query: 196 SEFSVYPLQKGKEIHANILRH-GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 254
+ + G+ IH + + +++V ++L+ +Y K G + A +F + + V
Sbjct: 72 ---ELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIV 128
Query: 255 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 314
+WS+M+ + KN P +A+E F +MV+ A D P+ VT++++ VHG
Sbjct: 129 TWSSMVSGFEKNGSPYQAVEFFRRMVM-ASDVTPDRVTLITLVSACTKLSNSRLGRCVHG 187
Query: 315 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 374
F++RRG + + ++N+L+ Y + +F + DV+SW+++I+ Y NG +
Sbjct: 188 FVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAE 247
Query: 375 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 434
A+ +F +M+ G P+ + + VL AC+ A +E+G+ E + K + ++ +V
Sbjct: 248 ALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK-GLETEVKVSTALV 306
Query: 435 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA-ERASAMLFE 487
D+ + +EA + +P W +L+ ++ A + E S ML E
Sbjct: 307 DMYMKCFSPEEAYAVFSRIP-RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLE 359
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 85/171 (49%), Gaps = 4/171 (2%)
Query: 234 KFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTM 293
KF A +F M ++ W+ ++ ++ + L F M + + P++ T+
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRD--EEKPDNFTL 63
Query: 294 VSVXXXXXXXXXXXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIGERVFDKVK 352
+HGF+ + L S + V ++LI MY +CG + R+FD+++
Sbjct: 64 PVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELE 123
Query: 353 NPDVVSWNSLISMYGNNGYGKKAIQIFENMI-HQGVSPSYISFITVLCACS 402
PD+V+W+S++S + NG +A++ F M+ V+P ++ IT++ AC+
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/210 (20%), Positives = 88/210 (41%), Gaps = 6/210 (2%)
Query: 42 PVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDG 101
P KD+ S + + + ++ +L + P + ++ SC++
Sbjct: 326 PRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQA 385
Query: 102 RDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMV 161
+ H Y++ G D +P++ L+ +Y GSL A KVF+ + +W + +
Sbjct: 386 KCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIH 445
Query: 162 GRGEELLELYRQM-NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR-HGYE 219
G+G + LE + M S + + T+ +L AC + + +G I ++ +
Sbjct: 446 GKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGL----IHEGLRIFKLMVNDYRLA 501
Query: 220 ENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
N+ L+D+ + G + A + + MP
Sbjct: 502 PNLEHYAVLVDLLGRVGDLDTAIEITKRMP 531
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 303 bits (776), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 168/510 (32%), Positives = 282/510 (55%), Gaps = 20/510 (3%)
Query: 57 LIQSLCRGGNHKQALEVL----WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
++ SLC+ +ALE L P TI ++ +C+ G+++H Y + +G
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 113 -LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
LD++ ++ + L++MY + R+VFD +R I +WNA + +E L L+
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 172 RQMNWS-GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLD 230
M S G+ ++ T V+ ACV S + + IH +++ G + + V TL+D
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSG----AFSRKEAIHGFVVKRGLDRDRFVQNTLMD 448
Query: 231 VYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM------VLEAC 284
+Y++ G I A +F M ++ V+W+ MI Y ++ AL L H+M V +
Sbjct: 449 MYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGA 508
Query: 285 DSI---PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI 341
+ PNS+T++++ +H + ++ L + + V +AL+ MY +CG +
Sbjct: 509 SRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCL 568
Query: 342 SIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCAC 401
+ +VFD++ +V++WN +I YG +G G++AI + M+ QGV P+ ++FI+V AC
Sbjct: 569 QMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAAC 628
Query: 402 SHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT- 460
SH+G+V+EG +F M Y + P +HYAC+VDLLGRA R+ EA +L+ MP +
Sbjct: 629 SHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAG 688
Query: 461 VWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMG 520
W SLLG+ RIH N E+ E A+ L +LEP A +YVLLA+IY+ A +W VR+ M
Sbjct: 689 AWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMK 748
Query: 521 KRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
++ ++K PGCSWIE +++ FV+ + +P
Sbjct: 749 EQGVRKEPGCSWIEHGDEVHKFVAGDSSHP 778
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 177/385 (45%), Gaps = 24/385 (6%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPY-LATKLINMYHELGSLDCARK 138
P + L+++ A G+ +H ++ G D +A L+N+Y + G K
Sbjct: 95 PDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYK 154
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
VFD ER WN+ +L + E LE +R M + FT V+ AC
Sbjct: 155 VFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTAC----- 209
Query: 199 SVYP----LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 254
S P L GK++HA LR G E N ++ TL+ +Y K G ++ + + + ++ V
Sbjct: 210 SNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 268
Query: 255 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 314
+W+ ++ +N+ ++ALE +MVLE + P+ T+ SV +H
Sbjct: 269 TWNTVLSSLCQNEQLLEALEYLREMVLEGVE--PDEFTISSVLPACSHLEMLRTGKELHA 326
Query: 315 FILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 373
+ L+ G LD V +AL+ MY C ++ G RVFD + + + WN++I+ Y N + K
Sbjct: 327 YALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDK 386
Query: 374 KAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH--- 429
+A+ +F M G+ + + V+ AC V G + + + + G++
Sbjct: 387 EALLLFIGMEESAGLLANSTTMAGVVPAC-----VRSGAFSRKEAIHGFVVKRGLDRDRF 441
Query: 430 -YACMVDLLGRANRLDEAIKLIEDM 453
++D+ R ++D A+++ M
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIFGKM 466
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 14/330 (4%)
Query: 143 TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYP 202
++ R+ W R+ E + Y M GI D + + +LKA +
Sbjct: 57 SQSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVA----DLQD 112
Query: 203 LQKGKEIHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 261
++ GK+IHA++ + GY +++ V TL+++Y K G VF + +N VSW+++I
Sbjct: 113 MELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS 172
Query: 262 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX---XXXXXXXXVHGFILR 318
+ ALE F M+ E + P+S T+VSV VH + LR
Sbjct: 173 SLCSFEKWEMALEAFRCMLDENVE--PSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLR 230
Query: 319 RG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
+G L+S +IN L+ MYG+ G+++ + + D+V+WN+++S N +A++
Sbjct: 231 KGELNSF--IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALE 288
Query: 378 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 437
M+ +GV P + +VL ACSH ++ GK L L + + +VD+
Sbjct: 289 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 438 GRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
++ ++ + M F+ +W +++
Sbjct: 349 CNCKQVLSGRRVFDGM-FDRKIGLWNAMIA 377
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 302 bits (774), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 166/492 (33%), Positives = 276/492 (56%), Gaps = 14/492 (2%)
Query: 66 NHKQALEVLWSER-----NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLA 120
NH Q +++S +P T L+++C+ S GR VH + G D D ++
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 121 TKLINMYHELGSLDCARKVFD--ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG 178
LI +Y + L AR VF+ ERTI W A A A G E LE++ QM
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 179 IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCI 238
+ D VL A + L++G+ IHA++++ G E ++ +L +YAK G +
Sbjct: 218 VKPDWVALVSVLNAFTC----LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQV 273
Query: 239 SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXX 298
+ A +F M + N + W+AMI YAKN +A+++FH+M+ + D P+++++ S
Sbjct: 274 ATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK--DVRPDTISITSAIS 331
Query: 299 XXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVS 358
++ ++ R + + +ALI M+ +CG + VFD+ + DVV
Sbjct: 332 ACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVV 391
Query: 359 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 418
W+++I YG +G ++AI ++ M GV P+ ++F+ +L AC+H+G+V EG F M
Sbjct: 392 WSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM- 450
Query: 419 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
+ ++I+P +HYAC++DLLGRA LD+A ++I+ MP +PG TVWG+LL +C+ H + EL
Sbjct: 451 ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELG 510
Query: 479 ERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKK 538
E A+ LF ++P N G+YV L+++YA A++W V VR M ++ L K GCSW+EV+ +
Sbjct: 511 EYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGR 570
Query: 539 IYSFVSSEEDNP 550
+ +F ++ +P
Sbjct: 571 LEAFRVGDKSHP 582
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/394 (29%), Positives = 209/394 (53%), Gaps = 15/394 (3%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
LI S K+ + +H L+ GL +L TKLI+ G + AR+VFD+
Sbjct: 27 LIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQ 83
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
I+ WNA R + ++ L +Y M + + D FT+ ++LKAC + LQ G+
Sbjct: 84 IFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACS----GLSHLQMGR 139
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA--MPAKNSVSWSAMIGCYAK 265
+HA + R G++ ++ V L+ +YAK + A +VF +P + VSW+A++ YA+
Sbjct: 140 FVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQ 199
Query: 266 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 325
N P++ALE+F QM D P+ V +VSV +H +++ GL+
Sbjct: 200 NGEPMEALEIFSQM--RKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEP 257
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
++ +L TMY +CG+++ + +FDK+K+P+++ WN++IS Y NGY ++AI +F MI++
Sbjct: 258 DLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK 317
Query: 386 GVSPSYISFITVLCACSHAGLVEEGKILFESM-LSKYRIHPGMEHYACMVDLLGRANRLD 444
V P IS + + AC+ G +E+ + ++E + S YR + + ++D+ + +
Sbjct: 318 DVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSV- 374
Query: 445 EAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
E +L+ D + VW +++ +H A A
Sbjct: 375 EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREA 408
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 302 bits (773), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 169/497 (34%), Positives = 266/497 (53%), Gaps = 45/497 (9%)
Query: 91 SCAQKSSFSDG-RDVHRYLVDSGLDQDPYLATKLINMYHELGSLDC---ARKVFDETRER 146
SC Q+ S + + +H ++ +GL QD Y TK ++ S D A+ VFD
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 147 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG 206
++WN R + E L LY++M S P + +T+ +LKAC S S + ++
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKAC--SNLSAF--EET 134
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYA-------------------------------KF 235
+IHA I + GYE +++ + +L++ YA K
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 194
Query: 236 GCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVS 295
G + A ++FR M KN++SW+ MI Y + DM +AL+LFH+M + D P++V++ +
Sbjct: 195 GKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEM--QNSDVEPDNVSLAN 252
Query: 296 VXXXXXXXXXXXXXXXVHGFI--LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN 353
+H ++ R +DS++ + LI MY +CGE+ VF +K
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCV--LIDMYAKCGEMEEALEVFKNIKK 310
Query: 354 PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 413
V +W +LIS Y +G+G++AI F M G+ P+ I+F VL ACS+ GLVEEGK++
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLI 370
Query: 414 FESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHC 473
F SM Y + P +EHY C+VDLLGRA LDEA + I++MP +P +WG+LL +CRIH
Sbjct: 371 FYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHK 430
Query: 474 NAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 533
N EL E +L ++P++ G YV A+I+A K W R+LM ++ + KVPGCS I
Sbjct: 431 NIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTI 490
Query: 534 EVKKKIYSFVSSEEDNP 550
++ + F++ + +P
Sbjct: 491 SLEGTTHEFLAGDRSHP 507
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 102/210 (48%), Gaps = 10/210 (4%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + +K+AL++ +N P + ++ + +CAQ + G+ +H YL +
Sbjct: 218 MISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR 277
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ D L LI+MY + G ++ A +VF +++++ W A A G G E + +
Sbjct: 278 IRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFM 337
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDV 231
+M GI + T+T VL AC + +++GK I ++ R + + I ++D+
Sbjct: 338 EMQKMGIKPNVITFTAVLTACSYTGL----VEEGKLIFYSMERDYNLKPTIEHYGCIVDL 393
Query: 232 YAKFGCISYANSVFRAMPAK-NSVSWSAMI 260
+ G + A + MP K N+V W A++
Sbjct: 394 LGRAGLLDEAKRFIQEMPLKPNAVIWGALL 423
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 127/315 (40%), Gaps = 43/315 (13%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T L+++C+ S+F + +H + G + D Y LIN Y G+ A +FD
Sbjct: 117 TFPSLLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRI 176
Query: 144 RERTIYIWNAFFRALAMVGR-------------------------------GEELLELYR 172
E WN+ + G+ +E L+L+
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFH 236
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+M S + D + L AC + L++GK IH+ + + + + L+D+Y
Sbjct: 237 EMQNSDVEPDNVSLANALSACA----QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMY 292
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
AK G + A VF+ + K+ +W+A+I YA + +A+ F +M + PN +T
Sbjct: 293 AKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEM--QKMGIKPNVIT 350
Query: 293 MVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI---NALITMYGRCGEISIGERVFD 349
+V + + + R + + P I ++ + GR G + +R
Sbjct: 351 FTAVLTACSYTGLVEEGKLIF-YSMERDYN-LKPTIEHYGCIVDLLGRAGLLDEAKRFIQ 408
Query: 350 KVK-NPDVVSWNSLI 363
++ P+ V W +L+
Sbjct: 409 EMPLKPNAVIWGALL 423
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 301 bits (772), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 281/538 (52%), Gaps = 70/538 (13%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P + L + CA+ S+F G+ +H SGLD D ++ + +MY G + ARKV
Sbjct: 114 PDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKV 173
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL--------- 190
FD ++ + +A A A G EE++ + +M SGI ++ ++ +L
Sbjct: 174 FDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYH 233
Query: 191 -KACV--------------VSEFSVYP-------LQKGKEIHANILRHGYEENIHVMTTL 228
+A V V+ SV P L G+ IH +++ G ++ V++ +
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAM 293
Query: 229 LDVYAK----FGCISYANSVFRAMPAK--------------------------------N 252
+D+Y K +G IS N F M A N
Sbjct: 294 IDMYGKSGHVYGIISLFNQ-FEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELN 352
Query: 253 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV 312
VSW+++I A+N ++ALELF +M + PN VT+ S+
Sbjct: 353 VVSWTSIIAGCAQNGKDIEALELFREMQVAGVK--PNHVTIPSMLPACGNIAALGHGRST 410
Query: 313 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 372
HGF +R L + V +ALI MY +CG I++ + VF+ + ++V WNSL++ + +G
Sbjct: 411 HGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKA 470
Query: 373 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 432
K+ + IFE+++ + P +ISF ++L AC GL +EG F+ M +Y I P +EHY+C
Sbjct: 471 KEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSC 530
Query: 433 MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWN 492
MV+LLGRA +L EA LI++MPFEP VWG+LL SCR+ N +LAE A+ LF LEP N
Sbjct: 531 MVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN 590
Query: 493 AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
G YVLL++IYA MW++V S+R M L+K PGCSWI+VK ++Y+ ++ ++ +P
Sbjct: 591 PGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHP 648
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 144/346 (41%), Gaps = 37/346 (10%)
Query: 105 HRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRG 164
H ++ SG D Y++ KLI Y + A V + TIY +++ AL
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 165 EELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHV 224
+ + ++ +M G+ D + K C +E S + + GK+IH G + + V
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVC--AELSAFKV--GKQIHCVSCVSGLDMDAFV 153
Query: 225 MTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
++ +Y + G + A VF M K+ V+ SA++ YA+ + + + +M
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI 213
Query: 285 DS---------------------------------IPNSVTMVSVXXXXXXXXXXXXXXX 311
++ P+ VT+ SV
Sbjct: 214 EANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRL 273
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 371
+HG+++++GL VI+A+I MYG+ G + +F++ + + N+ I+ NG
Sbjct: 274 IHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGL 333
Query: 372 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM 417
KA+++FE Q + + +S+ +++ C+ G E LF M
Sbjct: 334 VDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM 379
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/352 (20%), Positives = 150/352 (42%), Gaps = 53/352 (15%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
++ R G HK+A+ + + P T+ ++ S + GR +H Y++ G
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 282
Query: 113 LDQDPYLATKLINMYHELGS-------------------------------LDCARKVFD 141
L +D + + +I+MY + G +D A ++F+
Sbjct: 283 LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 142 ETRERTIYI----WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
+E+T+ + W + A G+ E LEL+R+M +G+ + T +L AC
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPAC---- 398
Query: 198 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
++ L G+ H +R +N+HV + L+D+YAK G I+ + VF MP KN V W+
Sbjct: 399 GNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWN 458
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
+++ ++ + + + +F ++ P+ ++ S+ +
Sbjct: 459 SLMNGFSMHGKAKEVMSIFESLMRTRLK--PDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 318 RR-GLDSIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLIS 364
G+ + + ++ + GR G++ + +D +K PD W +L++
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKL---QEAYDLIKEMPFEPDSCVWGALLN 565
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 103/213 (48%), Gaps = 2/213 (0%)
Query: 205 KGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYA 264
K + HA IL+ G + + ++ L+ Y+ + C + A+ V +++P S+S++I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 265 KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI 324
K + +++ +F +M IP+S + ++ +H GLD
Sbjct: 93 KAKLFTQSIGVFSRMFSHGL--IPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMD 150
Query: 325 MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH 384
V ++ MY RCG + +VFD++ + DVV+ ++L+ Y G ++ ++I M
Sbjct: 151 AFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMES 210
Query: 385 QGVSPSYISFITVLCACSHAGLVEEGKILFESM 417
G+ + +S+ +L + +G +E ++F+ +
Sbjct: 211 SGIEANIVSWNGILSGFNRSGYHKEAVVMFQKI 243
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 111/234 (47%), Gaps = 20/234 (8%)
Query: 57 LIQSLCRGGNHKQALEVLWSER----NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + G +ALE+ + P+H TI ++ +C ++ GR H + V
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
L + ++ + LI+MY + G ++ ++ VF+ + + WN+ +M G+ +E++ ++
Sbjct: 419 LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFE 478
Query: 173 QMNWSGIPSDRFTYTYVLKAC----VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
+ + + D ++T +L AC + E Y +E +G + + + +
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEE-------YGIKPRLEHYSCM 531
Query: 229 LDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIG-CYAKNDM---PVKALELFH 277
+++ + G + A + + MP + +S W A++ C +N++ + A +LFH
Sbjct: 532 VNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFH 585
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 298 bits (764), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 155/471 (32%), Positives = 255/471 (54%), Gaps = 6/471 (1%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T ++++C + G +H ++ + + Y+ + LI+MY +LG LD A +
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
+ + W ++ L +RQM GI SD T + AC
Sbjct: 548 LIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA----G 603
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
+ L++G++IHA G+ ++ L+ +Y++ G I + F A ++++W+A+
Sbjct: 604 LQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNAL 663
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
+ + ++ +AL +F +M E D+ N+ T S VH I +
Sbjct: 664 VSGFQQSGNNEEALRVFVRMNREGIDN--NNFTFGSAVKAASETANMKQGKQVHAVITKT 721
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
G DS V NALI+MY +CG IS E+ F +V + VSWN++I+ Y +G+G +A+ F
Sbjct: 722 GYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSF 781
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 439
+ MIH V P++++ + VL ACSH GLV++G FESM S+Y + P EHY C+VD+L R
Sbjct: 782 DQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTR 841
Query: 440 ANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLL 499
A L A + I++MP +P VW +LL +C +H N E+ E A+ L ELEP ++ YVLL
Sbjct: 842 AGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLL 901
Query: 500 ADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
+++YA +K W R+ M ++ ++K PG SWIEVK I+SF ++++P
Sbjct: 902 SNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHP 952
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 171/335 (51%), Gaps = 6/335 (1%)
Query: 80 PSHKTIEVLIQSCAQKS-SFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
P+H+T++ L++ C + + S +GR +H ++ GLD + L+ KL + Y G L A K
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFK 141
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
VFDE ERTI+ WN + LA E+ L+ +M + + T++ VL+AC
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
+ ++ +IHA IL G ++ V L+D+Y++ G + A VF + K+ SW A
Sbjct: 202 AFDVVE---QIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVA 258
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
MI +KN+ +A+ LF M + +P SV +HG +L+
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGI--MPTPYAFSSVLSACKKIESLEIGEQLHGLVLK 316
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
G S V NAL+++Y G + E +F + D V++N+LI+ GYG+KA+++
Sbjct: 317 LGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMEL 376
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 413
F+ M G+ P + +++ ACS G + G+ L
Sbjct: 377 FKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQL 411
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 172/359 (47%), Gaps = 10/359 (2%)
Query: 57 LIQSLCRGGNHKQALEVL----WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI L + G ++A+E+ P T+ L+ +C+ + G+ +H Y G
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ + L+N+Y + ++ A F ET + +WN A ++ ++R
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
QM I +++TY +LK C+ + L+ G++IH+ I++ ++ N +V + L+D+Y
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCI----RLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMY 535
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
AK G + A + K+ VSW+ MI Y + + KAL F QM+ S + V
Sbjct: 536 AKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRS--DEVG 593
Query: 293 MVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK 352
+ + +H G S +P NAL+T+Y RCG+I F++ +
Sbjct: 594 LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653
Query: 353 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
D ++WN+L+S + +G ++A+++F M +G+ + +F + + A S +++GK
Sbjct: 654 AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGK 712
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 167/459 (36%), Positives = 239/459 (52%), Gaps = 10/459 (2%)
Query: 82 HKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFD 141
H TI ++ C GR+VH+ + + L + L+NMY + G +D AR VFD
Sbjct: 218 HATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFD 277
Query: 142 ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVY 201
R + W G E LEL R M + G+ + T ++ C
Sbjct: 278 RMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVC----GDAL 333
Query: 202 PLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 261
+ GK +H +R +I + T+L+ +YAK + VF ++ WSA+I
Sbjct: 334 KVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIA 393
Query: 262 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 321
+N++ AL LF +M E D PN T+ S+ +H ++ + G
Sbjct: 394 GCVQNELVSDALGLFKRMRRE--DVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTGF 451
Query: 322 DSIMPVINALITMYGRCGEISIGERVFDKV----KNPDVVSWNSLISMYGNNGYGKKAIQ 377
S + L+ +Y +CG + ++F+ + K+ DVV W +LIS YG +G G A+Q
Sbjct: 452 MSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNALQ 511
Query: 378 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 437
+F M+ GV+P+ I+F + L ACSH+GLVEEG LF ML Y+ HY C+VDLL
Sbjct: 512 VFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDLL 571
Query: 438 GRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYV 497
GRA RLDEA LI +PFEP TVWG+LL +C H N +L E A+ LFELEP N GNYV
Sbjct: 572 GRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENVQLGEMAANKLFELEPENTGNYV 631
Query: 498 LLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVK 536
LLA+IYA W D++ VR +M L+K PG S IE++
Sbjct: 632 LLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 185/403 (45%), Gaps = 15/403 (3%)
Query: 72 EVLWSERNP--SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHE 129
EVL N S K + L+ A S S + +H +++ G L+T + Y
Sbjct: 3 EVLRRANNALSSVKQYQSLLNHFAATQSISKTKALHCHVITGGRVSGHILSTLSVT-YAL 61
Query: 130 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS--DRFTYT 187
G + ARK+F+E + ++ +N R G + + ++ +M G+ D +TY
Sbjct: 62 CGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYP 121
Query: 188 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 247
+V KA + ++ G +H ILR + + +V LL +Y FG + A VF
Sbjct: 122 FVAKAA----GELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDV 177
Query: 248 MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 307
M ++ +SW+ MI Y +N AL +F MV E+ D + T+VS+
Sbjct: 178 MKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVD--LDHATIVSMLPVCGHLKDLE 235
Query: 308 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 367
VH + + L + V NAL+ MY +CG + VFD+++ DV++W +I+ Y
Sbjct: 236 MGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYT 295
Query: 368 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGM 427
+G + A+++ M +GV P+ ++ +++ C A V +GK L + +++ +
Sbjct: 296 EDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCL-HGWAVRQQVYSDI 354
Query: 428 EHYACMVDLLGRANRLDEAIKLIEDMP-FEPGPTVWGSLLGSC 469
++ + + R+D ++ + GP W +++ C
Sbjct: 355 IIETSLISMYAKCKRVDLCFRVFSGASKYHTGP--WSAIIAGC 395
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 173/403 (42%), Gaps = 12/403 (2%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T + ++ + S G VH ++ S +D Y+ L+ MY G ++ AR V
Sbjct: 115 PDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDV 174
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FD + R + WN G + L ++ M + D T +L C
Sbjct: 175 FDVMKNRDVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVC----GH 230
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
+ L+ G+ +H + + I V L+++Y K G + A VF M ++ ++W+ M
Sbjct: 231 LKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCM 290
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I Y ++ ALEL M E PN+VT+ S+ +HG+ +R+
Sbjct: 291 INGYTEDGDVENALELCRLMQFEGVR--PNAVTIASLVSVCGDALKVNDGKCLHGWAVRQ 348
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
+ S + + +LI+MY +C + + RVF W+++I+ N A+ +F
Sbjct: 349 QVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLF 408
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL-FESMLSKYRIHPGMEHYACMVDLLG 438
+ M + V P+ + ++L A +A L + + + L+K ++ +V +
Sbjct: 409 KRMRREDVEPNIATLNSLLPA--YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYS 466
Query: 439 RANRLDEAIKL---IEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
+ L+ A K+ I++ +WG+L+ +H + A
Sbjct: 467 KCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNA 509
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/472 (33%), Positives = 259/472 (54%), Gaps = 8/472 (1%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
PS T L+++ + S+ H ++V GLD DP++ LI+ Y G D A ++
Sbjct: 102 PSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRL 160
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FD ++ + W A G E + + +M +G+ ++ T VLKA
Sbjct: 161 FDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAG----K 216
Query: 200 VYPLQKGKEIHANILRHGYEE-NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
V ++ G+ +H L G + ++ + ++L+D+Y K C A VF MP++N V+W+A
Sbjct: 217 VEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTA 276
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
+I Y ++ K + +F +M+ D PN T+ SV VH ++++
Sbjct: 277 LIAGYVQSRCFDKGMLVFEEML--KSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIK 334
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
++ LI +Y +CG + VF+++ +V +W ++I+ + +GY + A +
Sbjct: 335 NSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDL 394
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
F M+ VSP+ ++F+ VL AC+H GLVEEG+ LF SM ++ + P +HYACMVDL G
Sbjct: 395 FYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFG 454
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVL 498
R L+EA LIE MP EP VWG+L GSC +H + EL + A++ + +L+P ++G Y L
Sbjct: 455 RKGLLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTL 514
Query: 499 LADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
LA++Y+E++ W +V VRK M + + K PG SWIEVK K+ F++ ++ P
Sbjct: 515 LANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKP 566
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 166/349 (47%), Gaps = 18/349 (5%)
Query: 136 ARKVFDETRERTIYIWNAF---FRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 192
AR++ + + +I +W++ F + R L YR M +G+ R T+ +LKA
Sbjct: 55 ARRLLCQLQTLSIQLWDSLIGHFSGGITLNRRLSFLA-YRHMRRNGVIPSRHTFPPLLKA 113
Query: 193 CVVSEFSVYPLQKGK--EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 250
V+ L+ + HA+I++ G + + V +L+ Y+ G +A+ +F
Sbjct: 114 -------VFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAED 166
Query: 251 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 310
K+ V+W+AMI + +N +A+ F +M + N +T+VSV
Sbjct: 167 KDVVTWTAMIDGFVRNGSASEAMVYFVEM--KKTGVAANEMTVVSVLKAAGKVEDVRFGR 224
Query: 311 XVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 369
VHG L G + + + ++L+ MYG+C ++VFD++ + +VV+W +LI+ Y +
Sbjct: 225 SVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQS 284
Query: 370 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
K + +FE M+ V+P+ + +VL AC+H G + G+ + M+ K I
Sbjct: 285 RCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMI-KNSIEINTTA 343
Query: 430 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
++DL + L+EAI + E + E W +++ H A A
Sbjct: 344 GTTLIDLYVKCGCLEEAILVFERL-HEKNVYTWTAMINGFAAHGYARDA 391
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 97/206 (47%), Gaps = 6/206 (2%)
Query: 58 IQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDP 117
+QS C E+L S+ P+ KT+ ++ +CA + GR VH Y++ + ++ +
Sbjct: 282 VQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINT 341
Query: 118 YLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS 177
T LI++Y + G L+ A VF+ E+ +Y W A A G + +L+ M S
Sbjct: 342 TAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSS 401
Query: 178 GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHVMTTLLDVYAKFG 236
+ + T+ VL AC +++G+ + ++ R E ++D++ + G
Sbjct: 402 HVSPNEVTFMAVLSACAHGGL----VEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKG 457
Query: 237 CISYANSVFRAMPAK-NSVSWSAMIG 261
+ A ++ MP + +V W A+ G
Sbjct: 458 LLEEAKALIERMPMEPTNVVWGALFG 483
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 156/480 (32%), Positives = 267/480 (55%), Gaps = 7/480 (1%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG 131
E++ S P T L+ S ++ + + +H Y++ + D +L + LI+ Y +
Sbjct: 330 EMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCR 389
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
+ A+ +F + + ++ A G + LE++R + I + T +L
Sbjct: 390 GVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILP 449
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 251
+ + L+ G+E+H I++ G++ ++ ++D+YAK G ++ A +F + +
Sbjct: 450 VIGI----LLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKR 505
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
+ VSW++MI A++D P A+++F QM + + V++ +
Sbjct: 506 DIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGI--CYDCVSISAALSACANLPSESFGKA 563
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 371
+HGF+++ L S + + LI MY +CG + VF +K ++VSWNS+I+ GN+G
Sbjct: 564 IHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGK 623
Query: 372 GKKAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 430
K ++ +F M+ + G+ P I+F+ ++ +C H G V+EG F SM Y I P EHY
Sbjct: 624 LKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHY 683
Query: 431 ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEP 490
AC+VDL GRA RL EA + ++ MPF P VWG+LLG+CR+H N ELAE AS+ L +L+P
Sbjct: 684 ACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDP 743
Query: 491 WNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
N+G YVL+++ +A A+ W V VR LM +R +QK+PG SWIE+ K+ + FVS + ++P
Sbjct: 744 SNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHP 803
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 190/394 (48%), Gaps = 8/394 (2%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
+P+ T + ++ CA K G +H +V SG+D + + L++MY + G D A K
Sbjct: 236 SPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASK 295
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
+F WN G EE L + +M SG+ D T++ +L + VS+F
Sbjct: 296 LFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPS--VSKF 353
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
L+ K+IH I+RH +I + + L+D Y K +S A ++F + + V ++A
Sbjct: 354 E--NLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTA 411
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
MI Y N + + +LE+F +V PN +T+VS+ +HGFI++
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKIS--PNEITLVSILPVIGILLALKLGRELHGFIIK 469
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
+G D+ + A+I MY +CG +++ +F+++ D+VSWNS+I+ + AI I
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
F M G+ +S L AC++ GK + M+ K+ + + + ++D+
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMI-KHSLASDVYSESTLIDMYA 588
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
+ L A+ + + M E W S++ +C H
Sbjct: 589 KCGNLKAAMNVFKTMK-EKNIVSWNSIIAACGNH 621
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 173/370 (46%), Gaps = 22/370 (5%)
Query: 83 KTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSL-DCARKVFD 141
+ + +L+Q+C+ + G+ VH +L+ + + D Y +++ MY GS DC + +
Sbjct: 36 RRLSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYR 95
Query: 142 -ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACV-VSEFS 199
+ R +I WN+ + G + L Y +M G+ D T+ ++KACV + F
Sbjct: 96 LDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF- 154
Query: 200 VYPLQKGKEIHANILRH-GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
KG + ++ + G + N V ++L+ Y ++G I + +F + K+ V W+
Sbjct: 155 -----KGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNV 209
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
M+ YAK ++ F M ++ PN+VT V +HG ++
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQIS--PNAVTFDCVLSVCASKLLIDLGVQLHGLVVV 267
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
G+D + N+L++MY +CG ++F + D V+WN +IS Y +G ++++
Sbjct: 268 SGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTF 327
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
F MI GV P I+F ++L + S FE++ +IH + ++ +D+
Sbjct: 328 FYEMISSGVLPDAITFSSLLPSVSK----------FENLEYCKQIHCYIMRHSISLDIFL 377
Query: 439 RANRLDEAIK 448
+ +D K
Sbjct: 378 TSALIDAYFK 387
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 126/290 (43%), Gaps = 13/290 (4%)
Query: 203 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV--SWSAMI 260
L++GK++HA ++ + + + +L +YA G S +F + + S W+++I
Sbjct: 51 LRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSII 110
Query: 261 GCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
+ +N + +AL + +M+ C + P+ T + + +
Sbjct: 111 SSFVRNGLLNQALAFYFKML---CFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSL 167
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
G+D V ++LI Y G+I + ++FD+V D V WN +++ Y G I+ F
Sbjct: 168 GMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGF 227
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE-SMLSKYRIHPGMEHYACMVDLLG 438
M +SP+ ++F VL C+ L++ G L ++S +++ ++ +
Sbjct: 228 SVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKN--SLLSMYS 285
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFEL 488
+ R D+A KL M W ++ + + L E + +E+
Sbjct: 286 KCGRFDDASKLFRMMS-RADTVTWNCMISG---YVQSGLMEESLTFFYEM 331
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 297 bits (761), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 162/478 (33%), Positives = 252/478 (52%), Gaps = 5/478 (1%)
Query: 73 VLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGS 132
+L S P L++S + GR +H +++ +GL + + T ++NMY + G
Sbjct: 175 MLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGW 234
Query: 133 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 192
L A++VFD+ + GR + L+L+ + G+ D F ++ VLKA
Sbjct: 235 LVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKA 294
Query: 193 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN 252
C S+ L GK+IHA + + G E + V T L+D Y K A F+ + N
Sbjct: 295 CA----SLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPN 350
Query: 253 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV 312
VSWSA+I Y + +A++ F + + SI NS T S+ V
Sbjct: 351 DVSWSAIISGYCQMSQFEEAVKTFKSLRSKNA-SILNSFTYTSIFQACSVLADCNIGGQV 409
Query: 313 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 372
H ++R L +ALITMY +CG + VF+ + NPD+V+W + IS + G
Sbjct: 410 HADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNA 469
Query: 373 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 432
+A+++FE M+ G+ P+ ++FI VL ACSHAGLVE+GK ++ML KY + P ++HY C
Sbjct: 470 SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDC 529
Query: 433 MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWN 492
M+D+ R+ LDEA+K +++MPFEP W L C H N EL E A L +L+P +
Sbjct: 530 MIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPED 589
Query: 493 AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
YVL ++Y A W + + KLM +R+L+K CSWI+ K KI+ F+ ++ +P
Sbjct: 590 TAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHP 647
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 178/414 (42%), Gaps = 25/414 (6%)
Query: 81 SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVF 140
S + + L ++C + S S GR +H + + L ++ MY E SL+ A K+F
Sbjct: 82 SSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLF 141
Query: 141 DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSV 200
DE E A A G ++ + L+ M SG YT +LK+ V +
Sbjct: 142 DEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLV----NP 197
Query: 201 YPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI 260
L G++IHA+++R G N + T ++++Y K G + A VF M K V+ + ++
Sbjct: 198 RALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLM 257
Query: 261 GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG 320
Y + AL+LF +V E + +S V +H + + G
Sbjct: 258 VGYTQAGRARDALKLFVDLVTEGVEW--DSFVFSVVLKACASLEELNLGKQIHACVAKLG 315
Query: 321 LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFE 380
L+S + V L+ Y +C R F +++ P+ VSW+++IS Y ++A++ F+
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 375
Query: 381 NMIHQGVS-------PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACM 433
++ + S S +VL C+ G V I + S+Y + +
Sbjct: 376 SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQY-------GESAL 428
Query: 434 VDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFE 487
+ + + LD+A ++ E M P W + + + NA A R LFE
Sbjct: 429 ITMYSKCGCLDDANEVFESMD-NPDIVAWTAFISGHAYYGNASEALR----LFE 477
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/308 (22%), Positives = 143/308 (46%), Gaps = 11/308 (3%)
Query: 166 ELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE-NIHV 224
E E ++M+ +G+ ++Y + +AC + L G+ +H + +R G E ++ +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACR----ELRSLSHGRLLH-DRMRMGIENPSVLL 120
Query: 225 MTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
+L +Y + + A+ +F M N+VS + MI YA+ + KA+ LF M+ A
Sbjct: 121 QNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGML--AS 178
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 344
P S ++ +H ++R GL S + ++ MY +CG +
Sbjct: 179 GDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGA 238
Query: 345 ERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA 404
+RVFD++ V+ L+ Y G + A+++F +++ +GV F VL AC+
Sbjct: 239 KRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASL 298
Query: 405 GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGS 464
+ GK + + ++K + + +VD + + + A + +++ EP W +
Sbjct: 299 EELNLGKQI-HACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR-EPNDVSWSA 356
Query: 465 LL-GSCRI 471
++ G C++
Sbjct: 357 IISGYCQM 364
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/451 (33%), Positives = 253/451 (56%), Gaps = 8/451 (1%)
Query: 102 RDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMV 161
R +H +V S + ++ +L+ Y LG CA K+FDE ER + WN+ +
Sbjct: 51 RLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGR 110
Query: 162 GRGEELLELYRQMNWS--GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE 219
G + E+ +M S G + T+ ++ ACV ++G+ IH +++ G
Sbjct: 111 GYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGG----SKEEGRCIHGLVMKFGVL 166
Query: 220 ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM 279
E + V+ ++ Y K G ++ + +F + KN VSW+ MI + +N + K L F+
Sbjct: 167 EEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFN-- 224
Query: 280 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 339
+ P+ T ++V +HG I+ G + AL+ +Y + G
Sbjct: 225 MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLG 284
Query: 340 EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
+ VF ++ +PD ++W ++++ Y +G+G+ AI+ FE M+H G+SP +++F +L
Sbjct: 285 RLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLN 344
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 459
ACSH+GLVEEGK FE+M +YRI P ++HY+CMVDLLGR+ L +A LI++MP EP
Sbjct: 345 ACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSS 404
Query: 460 TVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 519
VWG+LLG+CR++ + +L +A+ LFELEP + NYV+L++IY+ + +W D +R LM
Sbjct: 405 GVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASGLWKDASRIRNLM 464
Query: 520 GKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
++ L + GCS+IE KI+ FV + +P
Sbjct: 465 KQKGLVRASGCSYIEHGNKIHKFVVGDWSHP 495
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 99/201 (49%), Gaps = 4/201 (1%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T +I +C S +GR +H ++ G+ ++ + IN Y + G L + K+
Sbjct: 132 PNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKL 191
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F++ + + WN G E+ L + G D+ T+ VL++C +
Sbjct: 192 FEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSC--EDMG 249
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
V L +G IH I+ G+ N + T LLD+Y+K G + +++VF + + +S++W+AM
Sbjct: 250 VVRLAQG--IHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAM 307
Query: 260 IGCYAKNDMPVKALELFHQMV 280
+ YA + A++ F MV
Sbjct: 308 LAAYATHGFGRDAIKHFELMV 328
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 9/205 (4%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T +++SC + +H ++ G + + T L+++Y +LG L+ + V
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F E W A A A G G + ++ + M GI D T+T++L AC S
Sbjct: 293 FHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGL- 351
Query: 200 VYPLQKGKEIHANI-LRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWS 257
+++GK + R+ + + + ++D+ + G + A + + MP + +S W
Sbjct: 352 ---VEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWG 408
Query: 258 AMIGC---YAKNDMPVKALELFHQM 279
A++G Y + KA E ++
Sbjct: 409 ALLGACRVYKDTQLGTKAAERLFEL 433
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 296 bits (758), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 166/499 (33%), Positives = 261/499 (52%), Gaps = 40/499 (8%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
++ +C+ + + G VH + S D Y+ + L++MY + G+++ A++VFDE +R
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN 217
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
+ WN+ G E L++++ M S + D T V+ AC S+ ++ G+
Sbjct: 218 VVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACA----SLSAIKVGQ 273
Query: 208 EIHANILRHGYEEN-IHVMTTLLDVYAKFGCISYANSVFRAMP----------------- 249
E+H ++++ N I + +D+YAK I A +F +MP
Sbjct: 274 EVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMA 333
Query: 250 --------------AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA-CD---SIPNSV 291
+N VSW+A+I Y +N +AL LF + E+ C S N +
Sbjct: 334 ASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANIL 393
Query: 292 TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV 351
+ HGF + G + + V N+LI MY +CG + G VF K+
Sbjct: 394 KACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKM 453
Query: 352 KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
D VSWN++I + NGYG +A+++F M+ G P +I+ I VL AC HAG VEEG+
Sbjct: 454 MERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGR 513
Query: 412 ILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRI 471
F SM + + P +HY CMVDLLGRA L+EA +IE+MP +P +WGSLL +C++
Sbjct: 514 HYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKV 573
Query: 472 HCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCS 531
H N L + + L E+EP N+G YVLL+++YAE W DV +VRK M K + K PGCS
Sbjct: 574 HRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCS 633
Query: 532 WIEVKKKIYSFVSSEEDNP 550
WI+++ + F+ ++ +P
Sbjct: 634 WIKIQGHDHVFMVKDKSHP 652
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/391 (26%), Positives = 185/391 (47%), Gaps = 72/391 (18%)
Query: 75 WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLD 134
+++ +P K ++ I+S K S R VH ++ SG + ++ +LI+ Y + GSL+
Sbjct: 16 FTDSSPFAKLLDSCIKS---KLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLE 72
Query: 135 CARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSGIPS------- 181
R+VFD+ +R IY WN+ L +G +E L+R M W+ + S
Sbjct: 73 DGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDR 132
Query: 182 ------------------DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIH 223
+ +++ VL AC + + KG ++H+ I + + +++
Sbjct: 133 CEEALCYFAMMHKEGFVLNEYSFASVLSACS----GLNDMNKGVQVHSLIAKSPFLSDVY 188
Query: 224 VMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
+ + L+D+Y+K G ++ A VF M +N VSW+++I C+ +N V+AL++F QM+LE+
Sbjct: 189 IGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF-QMMLES 247
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG-LDSIMPVINALITMYGRCGEIS 342
P+ VT+ SV VHG +++ L + + + NA + MY +C I
Sbjct: 248 -RVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIK 306
Query: 343 IGERVFD-------------------------------KVKNPDVVSWNSLISMYGNNGY 371
+FD K+ +VVSWN+LI+ Y NG
Sbjct: 307 EARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGE 366
Query: 372 GKKAIQIFENMIHQGVSPSYISFITVLCACS 402
++A+ +F + + V P++ SF +L AC+
Sbjct: 367 NEEALSLFCLLKRESVCPTHYSFANILKACA 397
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 145/305 (47%), Gaps = 36/305 (11%)
Query: 181 SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK------ 234
+D + +L +C+ S+ S + + +HA++++ G+ I + L+D Y+K
Sbjct: 17 TDSSPFAKLLDSCIKSKLSAIYV---RYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLED 73
Query: 235 -------------------------FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMP 269
G + A+S+FR+MP ++ +W++M+ +A++D
Sbjct: 74 GRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRC 133
Query: 270 VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 329
+AL F M E + N + SV VH I + S + + +
Sbjct: 134 EEALCYFAMMHKEGF--VLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGS 191
Query: 330 ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 389
AL+ MY +CG ++ +RVFD++ + +VVSWNSLI+ + NG +A+ +F+ M+ V P
Sbjct: 192 ALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEP 251
Query: 390 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 449
++ +V+ AC+ ++ G+ + ++ ++ + VD+ + +R+ EA +
Sbjct: 252 DEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFI 311
Query: 450 IEDMP 454
+ MP
Sbjct: 312 FDSMP 316
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 102/217 (47%), Gaps = 16/217 (7%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLV--- 109
LI + G +++AL + + P+H + ++++CA + G H +++
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416
Query: 110 ---DSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEE 166
SG + D ++ LI+MY + G ++ VF + ER WNA A G G E
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476
Query: 167 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRH-GYEENIHVM 225
LEL+R+M SG D T VL AC + F +++G+ +++ R G
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGF----VEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 226 TTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIG 261
T ++D+ + G + A S+ MP + +SV W +++
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLA 569
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 295 bits (755), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 161/482 (33%), Positives = 262/482 (54%), Gaps = 9/482 (1%)
Query: 71 LEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL 130
L++ S PS T ++++ F+ G+ +H V +G +D + ++++ Y +
Sbjct: 239 LKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKH 298
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
+ R +FDE E +N + + + E L +R+M G DR + +
Sbjct: 299 DRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGF--DRRNFPFAT 356
Query: 191 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 250
+ + S LQ G+++H L + +HV +L+D+YAK A +F+++P
Sbjct: 357 MLSIAANLS--SLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQ 414
Query: 251 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 310
+ +VSW+A+I Y + + L+LF +M + + T +V
Sbjct: 415 RTTVSWTALISGYVQKGLHGAGLKLFTKM--RGSNLRADQSTFATVLKASASFASLLLGK 472
Query: 311 XVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 369
+H FI+R G L+++ + L+ MY +CG I +VF+++ + + VSWN+LIS + +N
Sbjct: 473 QLHAFIIRSGNLENVFSG-SGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADN 531
Query: 370 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
G G+ AI F MI G+ P +S + VL ACSH G VE+G F++M Y I P +H
Sbjct: 532 GDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKH 591
Query: 430 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
YACM+DLLGR R EA KL+++MPFEP +W S+L +CRIH N LAERA+ LF +E
Sbjct: 592 YACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSME 651
Query: 490 PW-NAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEED 548
+A YV +++IYA A W V+ V+K M +R ++KVP SW+EV KI+ F S+++
Sbjct: 652 KLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQT 711
Query: 549 NP 550
+P
Sbjct: 712 HP 713
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 183/417 (43%), Gaps = 16/417 (3%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATK--LINMYHELGSLDCAR 137
P H T L+ C + VH + V G D +P+L L+ Y E+ LD A
Sbjct: 145 PDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLAC 204
Query: 138 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
+F+E E+ +N G E + L+ +M SG FT++ VLKA V
Sbjct: 205 VLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV--- 261
Query: 198 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
++ G+++HA + G+ + V +LD Y+K + +F MP + VS++
Sbjct: 262 -GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYN 320
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACD--SIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 315
+I Y++ D +L F +M D + P + TM+S+ +H
Sbjct: 321 VVISSYSQADQYEASLHFFREMQCMGFDRRNFPFA-TMLSI---AANLSSLQMGRQLHCQ 376
Query: 316 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 375
L DSI+ V N+L+ MY +C E +F + VSW +LIS Y G
Sbjct: 377 ALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 376 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 435
+++F M + +F TVL A + + GK L ++ + + + +VD
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVD 495
Query: 436 LLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFE--LEP 490
+ + + +A+++ E+MP + W +L+ + + + E A A A + E L+P
Sbjct: 496 MYAKCGSIKDAVQVFEEMP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 122/269 (45%), Gaps = 17/269 (6%)
Query: 196 SEFSVYPLQKGKEIHANILRHGYEENIHVMT----TLLDVYAKFGCISYANSVFRAMPAK 251
S F V L + ++ A R Y+E H T T++ + K G +S A +F AMP +
Sbjct: 51 SNFIVEDLLRRGQVSA--ARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMPDR 108
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
V+W+ ++G YA+N +A +LF QM + ++P+ VT ++
Sbjct: 109 TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQ 168
Query: 312 VHGFILRRGLDS--IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 369
VH F ++ G D+ + V N L+ Y + + +F+++ D V++N+LI+ Y +
Sbjct: 169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKD 228
Query: 370 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
G ++I +F M G PS +F VL A +V L + G
Sbjct: 229 GLYTESIHLFLKMRQSGHQPSDFTFSGVLKA-----VVGLHDFALGQQLHALSVTTGFSR 283
Query: 430 YAC----MVDLLGRANRLDEAIKLIEDMP 454
A ++D + +R+ E L ++MP
Sbjct: 284 DASVGNQILDFYSKHDRVLETRMLFDEMP 312
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 150/352 (42%), Gaps = 20/352 (5%)
Query: 123 LINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG---I 179
+I+ + + G + AR +FD +RT+ W A +E +L+RQM S +
Sbjct: 85 MISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTL 144
Query: 180 PSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN--IHVMTTLLDVYAKFGC 237
P D T+T +L C P ++HA ++ G++ N + V LL Y +
Sbjct: 145 P-DHVTFTTLLPGCN----DAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRR 199
Query: 238 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 297
+ A +F +P K+SV+++ +I Y K+ + +++ LF +M P+ T V
Sbjct: 200 LDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKM--RQSGHQPSDFTFSGVL 257
Query: 298 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 357
+H + G V N ++ Y + + +FD++ D V
Sbjct: 258 KAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV 317
Query: 358 SWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILF-ES 416
S+N +IS Y + ++ F M G F T+L ++ ++ G+ L ++
Sbjct: 318 SYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQA 377
Query: 417 MLSKYR--IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
+L+ +H G +VD+ + +EA + + +P + W +L+
Sbjct: 378 LLATADSILHVG----NSLVDMYAKCEMFEEAELIFKSLP-QRTTVSWTALI 424
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPS----HKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI + G H L++ R + T ++++ A +S G+ +H +++ SG
Sbjct: 423 LISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG 482
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
++ + + L++MY + GS+ A +VF+E +R WNA A A G GE + +
Sbjct: 483 NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE-IHANILRHGYEENIHVMTTLLDV 231
+M SG+ D + VL AC F +++G E A +G +LD+
Sbjct: 543 KMIESGLQPDSVSILGVLTACSHCGF----VEQGTEYFQAMSPIYGITPKKKHYACMLDL 598
Query: 232 YAKFGCISYANSVFRAMPAK-NSVSWSAMI 260
+ G + A + MP + + + WS+++
Sbjct: 599 LGRNGRFAEAEKLMDEMPFEPDEIMWSSVL 628
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 295 bits (754), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 168/492 (34%), Positives = 266/492 (54%), Gaps = 17/492 (3%)
Query: 56 QLIQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQ 115
+++ + GG +A EV TI + C +S +++H Y +
Sbjct: 379 DVLRQMLAGGEDVKADEV----------TILNAVPVCFHESFLPSLKELHCYSLKQEFVY 428
Query: 116 DPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMN 175
+ +A + Y + GSL A++VF R +T+ WNA A L+ + QM
Sbjct: 429 NELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMK 488
Query: 176 WSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF 235
SG+ D FT +L AC + L+ GKE+H I+R+ E ++ V ++L +Y
Sbjct: 489 ISGLLPDSFTVCSLLSACS----KLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 544
Query: 236 GCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVS 295
G + ++F AM K+ VSW+ +I Y +N P +AL +F QMVL ++M+
Sbjct: 545 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLC--GISMMP 602
Query: 296 VXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD 355
V H + L+ L+ + +LI MY + G I+ +VF+ +K
Sbjct: 603 VFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKS 662
Query: 356 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE 415
SWN++I YG +G K+AI++FE M G +P ++F+ VL AC+H+GL+ EG +
Sbjct: 663 TASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLD 722
Query: 416 SMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI-EDMPFEPGPTVWGSLLGSCRIHCN 474
M S + + P ++HYAC++D+LGRA +LD+A++++ E+M E +W SLL SCRIH N
Sbjct: 723 QMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQN 782
Query: 475 AELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIE 534
E+ E+ +A LFELEP NYVLL+++YA W DV+ VR+ M + L+K GCSWIE
Sbjct: 783 LEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIE 842
Query: 535 VKKKIYSFVSSE 546
+ +K++SFV E
Sbjct: 843 LNRKVFSFVVGE 854
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/332 (27%), Positives = 164/332 (49%), Gaps = 12/332 (3%)
Query: 83 KTIEVLIQSCAQKSSFSDGRDVHRYLVDSG-LDQDPYLATKLINMYHELGSLDCARKVFD 141
+ + +L+Q+ ++ GR +H+ + S L D L T++I MY GS D +R VFD
Sbjct: 85 EALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD 144
Query: 142 ETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRFTYTYVLKACV-VSEFS 199
R + ++ WNA + + +E+LE + +M + + + D FTY V+KAC +S+
Sbjct: 145 ALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVG 204
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
+ G +H +++ G E++ V L+ Y G ++ A +F MP +N VSW++M
Sbjct: 205 I-----GLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSM 259
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDS--IPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
I ++ N ++ L +M+ E D +P+ T+V+V VHG+ +
Sbjct: 260 IRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAV 319
Query: 318 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
+ LD + + NAL+ MY +CG I+ + +F N +VVSWN+++ + G
Sbjct: 320 KLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFD 379
Query: 378 IFENMIHQG--VSPSYISFITVLCACSHAGLV 407
+ M+ G V ++ + + C H +
Sbjct: 380 VLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 152/336 (45%), Gaps = 8/336 (2%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P H T +I++CA S G VH +V +GL +D ++ L++ Y G + A ++
Sbjct: 185 PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQL 244
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQM---NWSG-IPSDRFTYTYVLKACVV 195
FD ER + WN+ R + G EE L +M N G D T VL C
Sbjct: 245 FDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAR 304
Query: 196 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 255
+ GK +H ++ ++ + + L+D+Y+K GCI+ A +F+ KN VS
Sbjct: 305 ER----EIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVS 360
Query: 256 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 315
W+ M+G ++ ++ QM+ D + VT+++ +H +
Sbjct: 361 WNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCY 420
Query: 316 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 375
L++ V NA + Y +CG +S +RVF +++ V SWN+LI + + + +
Sbjct: 421 SLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLS 480
Query: 376 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
+ M G+ P + ++L ACS + GK
Sbjct: 481 LDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGK 516
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 203 LQKGKEIHANILRHGYEENIHVMTT-LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 261
++ G++IH + N V+ T ++ +YA G + VF A+ +KN W+A+I
Sbjct: 100 IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVIS 159
Query: 262 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 321
Y++N++ + LE F +M+ D +P+ T V VHG +++ GL
Sbjct: 160 SYSRNELYDEVLETFIEMI-STTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGL 218
Query: 322 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFEN 381
+ V NAL++ YG G ++ ++FD + ++VSWNS+I ++ +NG+ +++ +
Sbjct: 219 VEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGE 278
Query: 382 MIHQ----GVSPSYISFITVLCACSHAGLVEEGK 411
M+ + P + +TVL C+ + GK
Sbjct: 279 MMEENGDGAFMPDVATLVTVLPVCAREREIGLGK 312
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 155/448 (34%), Positives = 251/448 (56%), Gaps = 7/448 (1%)
Query: 89 IQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTI 148
I++C +G +H + +GLD+D Y+A L+ MY +LG+++ A+KVFDE R
Sbjct: 116 IKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNS 175
Query: 149 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 208
+W + + E+ L+ M +G+ D T ++KAC +V+ + GK
Sbjct: 176 VLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKAC----GNVFAGKVGKC 231
Query: 209 IHANILRHGY-EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
+H +R + +++ ++ +++D+Y K + A +F +N V W+ +I +AK +
Sbjct: 232 VHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCE 291
Query: 268 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV 327
V+A +LF QM+ E+ +PN T+ ++ VHG+++R G++
Sbjct: 292 RAVEAFDLFRQMLRESI--LPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVN 349
Query: 328 INALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV 387
+ I MY RCG I + VFD + +V+SW+S+I+ +G NG ++A+ F M Q V
Sbjct: 350 FTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNV 409
Query: 388 SPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAI 447
P+ ++F+++L ACSH+G V+EG FESM Y + P EHYACMVDLLGRA + EA
Sbjct: 410 VPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAK 469
Query: 448 KLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAK 507
I++MP +P + WG+LL +CRIH +LA + L +EP + YVLL++IYA+A
Sbjct: 470 SFIDNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAG 529
Query: 508 MWSDVKSVRKLMGKRVLQKVPGCSWIEV 535
MW V VR+ MG + +K G S EV
Sbjct: 530 MWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 174/394 (44%), Gaps = 21/394 (5%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETR--E 145
L+ +Q + + + VH ++ G + + L + L N Y + LD A F+ +
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 146 RTIYIWNAFFRALAMVGRG--EELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
R + WN + ++L LY +M D F + +KACV + L
Sbjct: 70 RNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACV----GLGLL 125
Query: 204 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 263
+ G IH +++G +++ +V +L+++YA+ G + A VF +P +NSV W ++ Y
Sbjct: 126 ENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGY 185
Query: 264 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG-LD 322
K + LF ++ +++T++ + VHG +RR +D
Sbjct: 186 LKYSKDPEVFRLF--CLMRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFID 243
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
+ ++I MY +C + ++F+ + +VV W +LIS + +A +F M
Sbjct: 244 QSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQM 303
Query: 383 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME----HYACMVDLLG 438
+ + + P+ + +L +CS G + GK + Y I G+E ++ +D+
Sbjct: 304 LRESILPNQCTLAAILVSCSSLGSLRHGK-----SVHGYMIRNGIEMDAVNFTSFIDMYA 358
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
R + A + + MP E W S++ + I+
Sbjct: 359 RCGNIQMARTVFDMMP-ERNVISWSSMINAFGIN 391
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T+ ++ SC+ S G+ VH Y++ +G++ D T I+MY G++ AR V
Sbjct: 310 PNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTV 369
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FD ER + W++ A + G EE L+ + +M + + T+ +L AC S
Sbjct: 370 FDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSG-- 427
Query: 200 VYPLQKG-KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS-WS 257
+++G K+ + +G ++D+ + G I A S MP K S W
Sbjct: 428 --NVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWG 485
Query: 258 AMI 260
A++
Sbjct: 486 ALL 488
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 157/502 (31%), Positives = 262/502 (52%), Gaps = 36/502 (7%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
N + T+ +++ + S G+ +H ++ G + + + L+ MY +G + A+K
Sbjct: 136 NLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKK 195
Query: 139 VFDETRERTIYI------------------------------WNAFFRALAMVGRGEELL 168
VF +R + W A + LA G +E +
Sbjct: 196 VFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAI 255
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
E +R+M G+ D++ + VL AC + + +GK+IHA I+R ++++I+V + L
Sbjct: 256 ECFREMKVQGLKMDQYPFGSVLPAC----GGLGAINEGKQIHACIIRTNFQDHIYVGSAL 311
Query: 229 LDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 288
+D+Y K C+ YA +VF M KN VSW+AM+ Y + +A+++F M D P
Sbjct: 312 IDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGID--P 369
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
+ T+ HG + GL + V N+L+T+YG+CG+I R+F
Sbjct: 370 DHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 349 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
+++ D VSW +++S Y G + IQ+F+ M+ G+ P ++ V+ ACS AGLVE
Sbjct: 430 NEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVE 489
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
+G+ F+ M S+Y I P + HY+CM+DL R+ RL+EA++ I MPF P W +LL +
Sbjct: 490 KGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSA 549
Query: 469 CRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 528
CR N E+ + A+ L EL+P + Y LL+ IYA W V +R+ M ++ ++K P
Sbjct: 550 CRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEP 609
Query: 529 GCSWIEVKKKIYSFVSSEEDNP 550
G SWI+ K K++SF + +E +P
Sbjct: 610 GQSWIKWKGKLHSFSADDESSP 631
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 168/402 (41%), Gaps = 73/402 (18%)
Query: 116 DPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM- 174
+ +L +++ Y + S AR+VFD + ++ WN A + G E+ + ++
Sbjct: 40 ETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLP 99
Query: 175 NWSGIPSDRFTYTYVLKACVVSEFSVYP---------------------------LQKGK 207
+ G+ + Y L V + Y + GK
Sbjct: 100 DRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGK 159
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN--------------- 252
+IH +++ G+E + V + LL +YA GCIS A VF + +N
Sbjct: 160 QIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACG 219
Query: 253 ---------------SVSWSAMIGCYAKNDMPVKALELFHQMVLEAC--DSIPNSVTMVS 295
SVSW+AMI A+N + +A+E F +M ++ D P S
Sbjct: 220 MIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYP----FGS 275
Query: 296 VXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD 355
V +H I+R + V +ALI MY +C + + VFD++K +
Sbjct: 276 VLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN 335
Query: 356 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE 415
VVSW +++ YG G ++A++IF +M G+ P + + + AC++ +EEG
Sbjct: 336 VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEG----- 390
Query: 416 SMLSKYRIHPGMEHYAC----MVDLLGRANRLDEAIKLIEDM 453
S I G+ HY +V L G+ +D++ +L +M
Sbjct: 391 SQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEM 432
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 131/332 (39%), Gaps = 64/332 (19%)
Query: 201 YPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI 260
Y L K + + N+ LL Y+K G IS S F +P ++ V+W+ +I
Sbjct: 51 YALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLI 110
Query: 261 GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG 320
Y+ + + A++ ++ M+ + ++ VT++++ +HG +++ G
Sbjct: 111 EGYSLSGLVGAAVKAYNTMMRDFSANL-TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLG 169
Query: 321 LDSIMPVINALITMYGRCGEISIGERVFDKVKN--------------------------- 353
+S + V + L+ MY G IS ++VF + +
Sbjct: 170 FESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFR 229
Query: 354 ---PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
D VSW ++I NG K+AI+ F M QG+ F +VL AC G + EG
Sbjct: 230 GMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
Query: 411 KILFESMLS---KYRIHPGME-----------HYA----------------CMVDLLGRA 440
K + ++ + I+ G HYA MV G+
Sbjct: 290 KQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQT 349
Query: 441 NRLDEAIKLIEDMP---FEPGPTVWGSLLGSC 469
R +EA+K+ DM +P G + +C
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISAC 381
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 7/203 (3%)
Query: 71 LEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL 130
L++ S +P H T+ I +CA SS +G H + SGL ++ L+ +Y +
Sbjct: 360 LDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC 419
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
G +D + ++F+E R W A A A GR E ++L+ +M G+ D T T V+
Sbjct: 420 GDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVI 479
Query: 191 KACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
AC + ++KG+ + +G +I + ++D++++ G + A MP
Sbjct: 480 SACSRAGL----VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP 535
Query: 250 -AKNSVSWSAMI-GCYAKNDMPV 270
+++ W+ ++ C K ++ +
Sbjct: 536 FPPDAIGWTTLLSACRNKGNLEI 558
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 293 bits (751), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 159/462 (34%), Positives = 268/462 (58%), Gaps = 13/462 (2%)
Query: 96 SSFSDGRDVHRYLVDSGLD-QDPYLATKLINMYHELGS---LDCARKVFDETRER-TIYI 150
SS + R +H + + G+ D L LI L S + A KVF + + ++I
Sbjct: 28 SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87
Query: 151 WNAFFRALAMVGRGEELLELYRQMNWSG-IPSDRFTYTYVLKACVVSEFSVYPLQKGKEI 209
WN R A +G LYR+M SG + D TY +++KA ++ ++ G+ I
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVT----TMADVRLGETI 143
Query: 210 HANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMP 269
H+ ++R G+ I+V +LL +YA G ++ A VF MP K+ V+W+++I +A+N P
Sbjct: 144 HSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKP 203
Query: 270 VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 329
+AL L+ +M + P+ T+VS+ VH ++++ GL + N
Sbjct: 204 EEALALYTEMNSKGIK--PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSN 261
Query: 330 ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM-IHQGVS 388
L+ +Y RCG + + +FD++ + + VSW SLI NG+GK+AI++F+ M +G+
Sbjct: 262 VLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLL 321
Query: 389 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 448
P I+F+ +L ACSH G+V+EG F M +Y+I P +EH+ CMVDLL RA ++ +A +
Sbjct: 322 PCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE 381
Query: 449 LIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKM 508
I+ MP +P +W +LLG+C +H +++LAE A + +LEP ++G+YVLL+++YA +
Sbjct: 382 YIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQR 441
Query: 509 WSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
WSDV+ +RK M + ++KVPG S +EV +++ F+ ++ +P
Sbjct: 442 WSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHP 483
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 161/350 (46%), Gaps = 46/350 (13%)
Query: 57 LIQSLCRGGNHKQALEVLWSER-----NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
LI+ GN A + R P T LI++ + G +H ++ S
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
G Y+ L+++Y G + A KVFD+ E+ + WN+ A G+ EE L LY
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
+MN GI D FT +L AC + L GK +H +++ G N+H LLD+
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACA----KIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS-IPNS 290
YA+ G + A ++F M KNSVSW+++I A N +A+ELF M E+ + +P
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM--ESTEGLLPCE 324
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD---------SIMPVI---NALITMYGRC 338
+T V + H +++ G + I P I ++ + R
Sbjct: 325 ITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARA 373
Query: 339 GEISIGERVFDKVKN----PDVVSWNSLI---SMYGNNGYGKKA-IQIFE 380
G++ ++ ++ +K+ P+VV W +L+ +++G++ + A IQI +
Sbjct: 374 GQV---KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQ 420
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 139/279 (49%), Gaps = 10/279 (3%)
Query: 194 VVSEFSVYPLQKGKEIHANILRHGY-----EENIHVMTTLLDVYAKFGCISYANSVFRAM 248
++ + V + K ++IHA +RHG E H++ L+ + + +SYA+ VF +
Sbjct: 21 LLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSP-PPMSYAHKVFSKI 79
Query: 249 PAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 307
N W+ +I YA+ + A L+ +M + P++ T +
Sbjct: 80 EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVE-PDTHTYPFLIKAVTTMADVR 138
Query: 308 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 367
+H ++R G S++ V N+L+ +Y CG+++ +VFDK+ D+V+WNS+I+ +
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFA 198
Query: 368 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGM 427
NG ++A+ ++ M +G+ P + +++L AC+ G + GK + M+ K + +
Sbjct: 199 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMI-KVGLTRNL 257
Query: 428 EHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
++DL R R++EA L ++M + W SL+
Sbjct: 258 HSSNVLLDLYARCGRVEEAKTLFDEM-VDKNSVSWTSLI 295
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 293 bits (750), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/500 (33%), Positives = 262/500 (52%), Gaps = 16/500 (3%)
Query: 57 LIQSLCRGGNHKQALEVLWSER----NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I G +AL + +S R S + +I+ CA +H +V G
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETR-ERTIYIWNAFFRALAMVGRGEELLELY 171
D + T L+ Y + ++ A ++F E + W A EE ++L+
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLF 385
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
+M G+ + FTY+ +L A P+ E+HA +++ YE + V T LLD
Sbjct: 386 SEMKRKGVRPNEFTYSVILTA--------LPVISPSEVHAQVVKTNYERSSTVGTALLDA 437
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSV 291
Y K G + A VF + K+ V+WSAM+ YA+ A+++F ++ PN
Sbjct: 438 YVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIK--PNEF 495
Query: 292 TMVSVXXX-XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK 350
T S+ HGF ++ LDS + V +AL+TMY + G I E VF +
Sbjct: 496 TFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKR 555
Query: 351 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
+ D+VSWNS+IS Y +G KA+ +F+ M + V ++FI V AC+HAGLVEEG
Sbjct: 556 QREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEG 615
Query: 411 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCR 470
+ F+ M+ +I P EH +CMVDL RA +L++A+K+IE+MP G T+W ++L +CR
Sbjct: 616 EKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACR 675
Query: 471 IHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGC 530
+H EL A+ + ++P ++ YVLL+++YAE+ W + VRKLM +R ++K PG
Sbjct: 676 VHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGY 735
Query: 531 SWIEVKKKIYSFVSSEEDNP 550
SWIEVK K YSF++ + +P
Sbjct: 736 SWIEVKNKTYSFLAGDRSHP 755
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 95/426 (22%), Positives = 200/426 (46%), Gaps = 20/426 (4%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI R + + L + +N P+ T + A++ G VH +V +G
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
LD+ ++ LIN+Y + G++ AR +FD+T +++ WN+ A G E L ++
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
M + + ++ V+K C ++ L+ +++H +++++G+ + ++ T L+ Y
Sbjct: 285 SMRLNYVRLSESSFASVIKLCA----NLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAY 340
Query: 233 AKFGCISYANSVFRAMP-AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSV 291
+K + A +F+ + N VSW+AMI + +ND +A++LF +M + PN
Sbjct: 341 SKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR--PNEF 398
Query: 292 TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV 351
T + VH +++ + V AL+ Y + G++ +VF +
Sbjct: 399 TYSVI----LTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGI 454
Query: 352 KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL--CACSHAGLVEE 409
+ D+V+W+++++ Y G + AI++F + G+ P+ +F ++L CA ++A + +
Sbjct: 455 DDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASM-GQ 513
Query: 410 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
GK F K R+ + + ++ + + ++ A ++ + E W S++
Sbjct: 514 GK-QFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGY 571
Query: 470 RIHCNA 475
H A
Sbjct: 572 AQHGQA 577
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 134/270 (49%), Gaps = 10/270 (3%)
Query: 136 ARKVFDET--RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC 193
A +FD++ R+R YI + + GR +E L+ ++ G+ D ++ VLK
Sbjct: 46 AHNLFDKSPGRDRESYI--SLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVS 103
Query: 194 VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS 253
++ G+++H ++ G+ +++ V T+L+D Y K VF M +N
Sbjct: 104 ATLCDELF----GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNV 159
Query: 254 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 313
V+W+ +I YA+N M + L LF +M E PNS T + VH
Sbjct: 160 VTWTTLISGYARNSMNDEVLTLFMRMQNEGTQ--PNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 314 GFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 373
+++ GLD +PV N+LI +Y +CG + +FDK + VV+WNS+IS Y NG
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 374 KAIQIFENMIHQGVSPSYISFITVLCACSH 403
+A+ +F +M V S SF +V+ C++
Sbjct: 278 EALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 145/301 (48%), Gaps = 7/301 (2%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
GR +H + G D + T L++ Y + + RKVFDE +ER + W A
Sbjct: 112 GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYAR 171
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 220
+E+L L+ +M G + FT+ L V++E V +G ++H ++++G ++
Sbjct: 172 NSMNDEVLTLFMRMQNEGTQPNSFTFAAALG--VLAEEGVGG--RGLQVHTVVVKNGLDK 227
Query: 221 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
I V +L+++Y K G + A +F K+ V+W++MI YA N + ++AL +F+ M
Sbjct: 228 TIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMR 287
Query: 281 LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGE 340
L +S SV +H +++ G + AL+ Y +C
Sbjct: 288 LNYVRLSESS--FASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTA 345
Query: 341 ISIGERVFDKVK-NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
+ R+F ++ +VVSW ++IS + N ++A+ +F M +GV P+ ++ +L
Sbjct: 346 MLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILT 405
Query: 400 A 400
A
Sbjct: 406 A 406
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 85/184 (46%), Gaps = 13/184 (7%)
Query: 235 FGCISY-----ANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELF---HQMVLEACDS 286
FG +S A+++F P ++ S+ +++ ++++ +A LF H++ +E S
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCS 94
Query: 287 IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGER 346
I +SV VS +H ++ G + V +L+ Y + G +
Sbjct: 95 IFSSVLKVSATLCDELFGRQ-----LHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRK 149
Query: 347 VFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGL 406
VFD++K +VV+W +LIS Y N + + +F M ++G P+ +F L + G+
Sbjct: 150 VFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGV 209
Query: 407 VEEG 410
G
Sbjct: 210 GGRG 213
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 293 bits (749), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 161/504 (31%), Positives = 273/504 (54%), Gaps = 39/504 (7%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T +++SCA+ +F +G+ +H +++ G D D Y+ T LI+MY + G L+ A KV
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191
Query: 140 FDETRERTI--------------YI-----------------WNAFFRALAMVGRGEELL 168
FD++ R + YI WNA A G +E L
Sbjct: 192 FDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEAL 251
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
EL++ M + + D T V+ AC S ++ G+++H I HG+ N+ ++ L
Sbjct: 252 ELFKDMMKTNVRPDESTMVTVVSACAQSG----SIELGRQVHLWIDDHGFGSNLKIVNAL 307
Query: 229 LDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 288
+D+Y+K G + A +F +P K+ +SW+ +IG Y ++ +AL LF +M+ P
Sbjct: 308 IDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG--ETP 365
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRR--GLDSIMPVINALITMYGRCGEISIGER 346
N VTM+S+ +H +I +R G+ + + +LI MY +CG+I +
Sbjct: 366 NDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQ 425
Query: 347 VFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGL 406
VF+ + + + SWN++I + +G + +F M G+ P I+F+ +L ACSH+G+
Sbjct: 426 VFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGM 485
Query: 407 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
++ G+ +F +M Y++ P +EHY CM+DLLG + EA ++I M EP +W SLL
Sbjct: 486 LDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLL 545
Query: 467 GSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQK 526
+C++H N EL E + L ++EP N G+YVLL++IYA A W++V R L+ + ++K
Sbjct: 546 KACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKK 605
Query: 527 VPGCSWIEVKKKIYSFVSSEEDNP 550
VPGCS IE+ ++ F+ ++ +P
Sbjct: 606 VPGCSSIEIDSVVHEFIIGDKFHP 629
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 174/358 (48%), Gaps = 43/358 (12%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLIN---MYHELGSLDCARKVFDETR 144
L+ +C S R +H ++ GL Y +KLI + L A VF +
Sbjct: 39 LLHNCKTLQSL---RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQ 95
Query: 145 ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQ 204
E + IWN FR A+ L+LY M G+ + +T+ +VLK+C S+ +
Sbjct: 96 EPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSK----AFK 151
Query: 205 KGKEIHANILRHGYEENIHVMTTLLDV-------------------------------YA 233
+G++IH ++L+ G + +++V T+L+ + YA
Sbjct: 152 EGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYA 211
Query: 234 KFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTM 293
G I A +F +P K+ VSW+AMI YA+ +ALELF M+ + P+ TM
Sbjct: 212 SRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMM--KTNVRPDESTM 269
Query: 294 VSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN 353
V+V VH +I G S + ++NALI +Y +CGE+ +F+++
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY 329
Query: 354 PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
DV+SWN+LI Y + K+A+ +F+ M+ G +P+ ++ +++L AC+H G ++ G+
Sbjct: 330 KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 387
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 140/299 (46%), Gaps = 38/299 (12%)
Query: 203 LQKGKEIHANILRHGYEENIHVMTTLLD---VYAKFGCISYANSVFRAMPAKNSVSWSAM 259
LQ + IHA +++ G + ++ L++ + F + YA SVF+ + N + W+ M
Sbjct: 46 LQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLLIWNTM 105
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
+A + PV AL+L+ M+ + +PNS T V +HG +L+
Sbjct: 106 FRGHALSSDPVSALKLYVCMI--SLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDK---------------------VKNP---- 354
G D + V +LI+MY + G + +VFDK ++N
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLF 223
Query: 355 ------DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
DVVSWN++IS Y G K+A+++F++M+ V P + +TV+ AC+ +G +E
Sbjct: 224 DEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIE 283
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
G+ + + + ++ ++DL + L+ A L E +P++ W +L+G
Sbjct: 284 LGRQV-HLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK-DVISWNTLIG 340
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 68/133 (51%), Gaps = 6/133 (4%)
Query: 67 HKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVD--SGLDQDPYLA 120
+K+AL E+L S P+ T+ ++ +CA + GR +H Y+ G+ L
Sbjct: 348 YKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 407
Query: 121 TKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP 180
T LI+MY + G ++ A +VF+ +++ WNA AM GR + +L+ +M GI
Sbjct: 408 TSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQ 467
Query: 181 SDRFTYTYVLKAC 193
D T+ +L AC
Sbjct: 468 PDDITFVGLLSAC 480
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 174/523 (33%), Positives = 257/523 (49%), Gaps = 70/523 (13%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQ-DPYLATKLINMYHELGS-------------- 132
L+Q C S G+ +HR+L +G + + L+ LI MY + G
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 133 -----------------LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMN 175
L AR VFD ER + WN A G E L Y++
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 176 WSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN-------------- 221
SGI + F++ +L ACV S LQ ++ H +L G+ N
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSR----QLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 222 -----------------IHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYA 264
IH+ TTL+ YAK G + A +F MP KN VSW+A+I Y
Sbjct: 228 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 287
Query: 265 KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI 324
+ +AL+LF +M+ A P T S +HG+++R +
Sbjct: 288 RQGSGNRALDLFRKMI--ALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPN 345
Query: 325 MPVINALITMYGRCGEISIGERVFDKVKNP-DVVSWNSLISMYGNNGYGKKAIQIFENMI 383
VI++LI MY + G + ERVF + D V WN++IS +G G KA+++ ++MI
Sbjct: 346 AIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMI 405
Query: 384 HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 443
V P+ + + +L ACSH+GLVEEG FESM ++ I P EHYAC++DLLGRA
Sbjct: 406 KFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCF 465
Query: 444 DEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIY 503
E ++ IE+MPFEP +W ++LG CRIH N EL ++A+ L +L+P ++ Y+LL+ IY
Sbjct: 466 KELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIY 525
Query: 504 AEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 546
A+ W V+ +R +M KR + K SWIE++KK+ +F S+
Sbjct: 526 ADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSD 568
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 18/230 (7%)
Query: 38 PSANPVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWS----ERNPSHKTIEVLIQSCA 93
P NPV LI R G+ +AL++ P T + + A
Sbjct: 272 PEKNPVS---------WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASA 322
Query: 94 QKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRER-TIYIWN 152
+S G+++H Y++ + + + + + LI+MY + GSL+ + +VF ++ WN
Sbjct: 323 SIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWN 382
Query: 153 AFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHAN 212
ALA G G + L + M + +R T +L AC S L + +
Sbjct: 383 TMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGL---RWFESM 439
Query: 213 ILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIG 261
++HG + L+D+ + GC MP + + W+A++G
Sbjct: 440 TVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILG 489
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 290 bits (743), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 163/498 (32%), Positives = 269/498 (54%), Gaps = 11/498 (2%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHKTIEV----LIQSCAQKSSFSDGRDVHRYLVDSG 112
LI+ + +K+ALE HK+ EV +I + + S+ G ++H Y++ G
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
D + + LI+MY + + F ++ + W A E LEL+R
Sbjct: 417 WDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFR 476
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+ + D +L+A V + + KEIH +ILR G + + + L+DVY
Sbjct: 477 DVAKKRMEIDEMILGSILRASSV----LKSMLIVKEIHCHILRKGLLDTV-IQNELVDVY 531
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
K + YA VF ++ K+ VSW++MI A N +A+ELF +MV + +SV
Sbjct: 532 GKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSA--DSVA 589
Query: 293 MVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK 352
++ + +H ++LR+G + A++ MY CG++ + VFD+++
Sbjct: 590 LLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIE 649
Query: 353 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 412
++ + S+I+ YG +G GK A+++F+ M H+ VSP +ISF+ +L ACSHAGL++EG+
Sbjct: 650 RKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRG 709
Query: 413 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
+ M +Y + P EHY C+VD+LGRAN + EA + ++ M EP VW +LL +CR H
Sbjct: 710 FLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSH 769
Query: 473 CNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSW 532
E+ E A+ L ELEP N GN VL+++++AE W+DV+ VR M ++K PGCSW
Sbjct: 770 SEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSW 829
Query: 533 IEVKKKIYSFVSSEEDNP 550
IE+ K++ F + ++ +P
Sbjct: 830 IEMDGKVHKFTARDKSHP 847
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 171/336 (50%), Gaps = 13/336 (3%)
Query: 69 QALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS--GLDQDPYLATKLINM 126
Q L+V SE N + +++ C ++ + S GR +H + + + D +LA KL+ M
Sbjct: 69 QRLDV--SENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFM 125
Query: 127 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 186
Y + GSLD A KVFDE +RT + WN A G L LY M G+P ++
Sbjct: 126 YGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSF 185
Query: 187 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 246
+LKAC + ++ G E+H+ +++ GY ++ L+ +YAK +S A +F
Sbjct: 186 PALLKACA----KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFD 241
Query: 247 AMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 305
K ++V W++++ Y+ + ++ LELF +M + PNS T+VS
Sbjct: 242 GFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTG--PAPNSYTIVSALTACDGFSY 299
Query: 306 XXXXXXVHGFILRRGL-DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 364
+H +L+ S + V NALI MY RCG++ ER+ ++ N DVV+WNSLI
Sbjct: 300 AKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIK 359
Query: 365 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
Y N K+A++ F +MI G +S +++ A
Sbjct: 360 GYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 145/306 (47%), Gaps = 17/306 (5%)
Query: 167 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRH--GYEENIHV 224
L E +++++ S S + YVL+ C + +G+++H+ I + +E + +
Sbjct: 64 LTEAFQRLDVSENNSPVEAFAYVLELCGKRR----AVSQGRQLHSRIFKTFPSFELDF-L 118
Query: 225 MTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
L+ +Y K G + A VF MP + + +W+ MIG Y N P AL L+ M +E
Sbjct: 119 AGKLVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEG- 177
Query: 285 DSIPNSVTMV-SVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
+P ++ ++ +H +++ G S ++NAL++MY + ++S
Sbjct: 178 --VPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSA 235
Query: 344 GERVFDKVKNP-DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
R+FD + D V WNS++S Y +G + +++F M G +P+ + ++ L AC
Sbjct: 236 ARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACD 295
Query: 403 HAGLVEEGKILFESMLSKYRIHPGMEHYAC--MVDLLGRANRLDEAIKLIEDMPFEPGPT 460
+ GK + S+L K H E Y C ++ + R ++ +A +++ M
Sbjct: 296 GFSYAKLGKEIHASVL-KSSTHSS-ELYVCNALIAMYTRCGKMPQAERILRQMN-NADVV 352
Query: 461 VWGSLL 466
W SL+
Sbjct: 353 TWNSLI 358
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Query: 331 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPS 390
L+ MYG+CG + E+VFD++ + +WN++I Y +NG A+ ++ NM +GV
Sbjct: 122 LVFMYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLG 181
Query: 391 YISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 450
SF +L AC+ + G L S+L K H +V + + + L A +L
Sbjct: 182 LSSFPALLKACAKLRDIRSGSEL-HSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLF 240
Query: 451 EDMPFEPGPTVWGSLLGS 468
+ + +W S+L S
Sbjct: 241 DGFQEKGDAVLWNSILSS 258
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 159/482 (32%), Positives = 267/482 (55%), Gaps = 10/482 (2%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG 131
E++ +P+ T+ +++SC + G VH +V G++ Y+ ++NMY
Sbjct: 101 EMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCS 160
Query: 132 -SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
+++ A +F + + + W +G G L++Y+QM + + Y +
Sbjct: 161 VTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQM----LLENAEVTPYCI 216
Query: 191 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 250
V + S+ + GK+IHA++++ G++ N+ VM ++LD+Y + G +S A F M
Sbjct: 217 TIAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMED 276
Query: 251 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 310
K+ ++W+ +I ++D +AL +F + E+ +PN T S+
Sbjct: 277 KDLITWNTLISELERSD-SSEALLMFQR--FESQGFVPNCYTFTSLVAACANIAALNCGQ 333
Query: 311 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK-VKNPDVVSWNSLISMYGNN 369
+HG I RRG + + + NALI MY +CG I +RVF + V ++VSW S++ YG++
Sbjct: 334 QLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSH 393
Query: 370 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
GYG +A+++F+ M+ G+ P I F+ VL AC HAGLVE+G F M S+Y I+P +
Sbjct: 394 GYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDI 453
Query: 430 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER-ASAMLFEL 488
Y C+VDLLGRA ++ EA +L+E MPF+P + WG++LG+C+ H + L R A+ + EL
Sbjct: 454 YNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMEL 513
Query: 489 EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEED 548
+P G YV+L+ IYA W D VRK+M +K G SWI V+ +++SF S++
Sbjct: 514 KPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKM 573
Query: 549 NP 550
P
Sbjct: 574 CP 575
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 170/349 (48%), Gaps = 9/349 (2%)
Query: 119 LATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG 178
LAT LI Y E G ++ AR +FDE +R + W A A E + +M G
Sbjct: 47 LATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHEMVKQG 106
Query: 179 IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG-C 237
+ FT + VLK+C + Y G +H +++ G E +++V ++++YA
Sbjct: 107 TSPNEFTLSSVLKSCRNMKVLAY----GALVHGVVVKLGMEGSLYVDNAMMNMYATCSVT 162
Query: 238 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 297
+ A +FR + KN V+W+ +I + + L+++ QM+LE + P +T+
Sbjct: 163 MEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITI--AV 220
Query: 298 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 357
+H +++RG S +PV+N+++ +Y RCG +S + F ++++ D++
Sbjct: 221 RASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLI 280
Query: 358 SWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM 417
+WN+LIS + +A+ +F+ QG P+ +F +++ AC++ + G+ L +
Sbjct: 281 TWNTLISELERSD-SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 418 LSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
+ + +E ++D+ + + ++ ++ ++ W S++
Sbjct: 340 FRR-GFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMM 387
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/377 (21%), Positives = 164/377 (43%), Gaps = 22/377 (5%)
Query: 31 VCFVSINPSANPVKDIKSXXXXXXXQLIQSLCRGGNHKQAL----EVLWSERNPSHKTIE 86
C V++ + +DIK LI G+ L ++L + I
Sbjct: 158 TCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCIT 217
Query: 87 VLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRER 146
+ +++ A S + G+ +H ++ G + + ++++Y G L A+ F E ++
Sbjct: 218 IAVRASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDK 277
Query: 147 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG 206
+ WN L E LL ++++ G + +T+T ++ AC ++ L G
Sbjct: 278 DLITWNTLISELERSDSSEALL-MFQRFESQGFVPNCYTFTSLVAACA----NIAALNCG 332
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF-RAMPAKNSVSWSAMIGCYAK 265
+++H I R G+ +N+ + L+D+YAK G I + VF + +N VSW++M+ Y
Sbjct: 333 QQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGS 392
Query: 266 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR-GLDSI 324
+ +A+ELF +MV P+ + ++V + G++
Sbjct: 393 HGYGAEAVELFDKMVSSGIR--PDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPD 450
Query: 325 MPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLIS---MYGNNGY-----GKKA 375
+ N ++ + GR G+I + +++ PD +W +++ + +NG +K
Sbjct: 451 RDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKV 510
Query: 376 IQIFENMIHQGVSPSYI 392
+++ M+ V SYI
Sbjct: 511 MELKPKMVGTYVMLSYI 527
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 289 bits (739), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 164/475 (34%), Positives = 265/475 (55%), Gaps = 18/475 (3%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVF--- 140
T+ LI +C + + +H + V G D + + Y + G L A VF
Sbjct: 142 TLSGLIAACCDRVDLI--KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGM 199
Query: 141 DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSV 200
DE R+ WN+ A G + L LY++M + G D FT VL A S+
Sbjct: 200 DELRDEVS--WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALT----SL 253
Query: 201 YPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG-CISYANS--VFRAMPAKNSVSWS 257
L G++ H +++ G+ +N HV + L+D Y+K G C +S VF+ + + + V W+
Sbjct: 254 DHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWN 313
Query: 258 AMIGCYAKND-MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
MI Y+ N+ + +A++ F QM + P+ + V V +HG
Sbjct: 314 TMISGYSMNEELSEEAVKSFRQM--QRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLA 371
Query: 317 LRRGLDS-IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 375
++ + S + V NALI++Y + G + VFD++ + VS+N +I Y +G+G +A
Sbjct: 372 IKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEA 431
Query: 376 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 435
+ +++ M+ G++P+ I+F+ VL AC+H G V+EG+ F +M ++I P EHY+CM+D
Sbjct: 432 LLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMID 491
Query: 436 LLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGN 495
LLGRA +L+EA + I+ MP++PG W +LLG+CR H N LAERA+ L ++P A
Sbjct: 492 LLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATP 551
Query: 496 YVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
YV+LA++YA+A+ W ++ SVRK M + ++K PGCSWIEVKKK + FV+ + +P
Sbjct: 552 YVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHP 606
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 156/473 (32%), Positives = 254/473 (53%), Gaps = 8/473 (1%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T+ +I C+ ++ G+ VH L + + + L+ +Y + G A V
Sbjct: 371 PDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLV 430
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQM--NWSGIPSDRFTYTYVLKACVVSE 197
F E+ + W + L G+ +E L+++ M + + D T V AC E
Sbjct: 431 FKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLE 490
Query: 198 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
L+ G ++H ++++ G N+ V ++L+D+Y+K G A VF +M +N V+W+
Sbjct: 491 ----ALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWN 546
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
+MI CY++N++P +++LF+ M+ + P+SV++ SV +HG+ L
Sbjct: 547 SMISCYSRNNLPELSIDLFNLMLSQGI--FPDSVSITSVLVAISSTASLLKGKSLHGYTL 604
Query: 318 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
R G+ S + NALI MY +CG E +F K+++ +++WN +I YG++G A+
Sbjct: 605 RLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALS 664
Query: 378 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 437
+F+ M G SP ++F++++ AC+H+G VEEGK +FE M Y I P MEHYA MVDLL
Sbjct: 665 LFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLL 724
Query: 438 GRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYV 497
GRA L+EA I+ MP E ++W LL + R H N EL ++ L +EP YV
Sbjct: 725 GRAGLLEEAYSFIKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYV 784
Query: 498 LLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
L ++Y EA + ++ + LM ++ L K PGCSWIEV + F S +P
Sbjct: 785 QLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSP 837
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 172/350 (49%), Gaps = 8/350 (2%)
Query: 68 KQALEVLWSERNPSHKTIEV----LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKL 123
+ +L++ +N S K + + +C+Q + GR +H +V GL DPY+ T L
Sbjct: 254 ESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSL 313
Query: 124 INMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDR 183
++MY + G + A VF ++ + IWNA A A G L+L+ M + D
Sbjct: 314 LSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDS 373
Query: 184 FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 243
FT + V+ C V Y GK +HA + + + + + LL +Y+K GC A
Sbjct: 374 FTLSNVISCCSVLGLYNY----GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYL 429
Query: 244 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 303
VF++M K+ V+W ++I KN +AL++F M + P+S M SV
Sbjct: 430 VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGL 489
Query: 304 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 363
VHG +++ GL + V ++LI +Y +CG + +VF + ++V+WNS+I
Sbjct: 490 EALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMI 549
Query: 364 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 413
S Y N + +I +F M+ QG+ P +S +VL A S + +GK L
Sbjct: 550 SCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSL 599
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 204/433 (47%), Gaps = 32/433 (7%)
Query: 58 IQSLCRGGNHKQALEVLWSERNPSHK------TIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
I++L + G + QAL L+S+ + S T L+++C+ ++ S G+ +H +V
Sbjct: 31 IRALIQKGEYLQALH-LYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVL 89
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDE-------TRERTIYIWNAFFRALAMVGRG 164
G DP++AT L+NMY + G LD A +VFD R + +WN+ R
Sbjct: 90 GWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRF 149
Query: 165 EELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHV 224
+E + +R+M G+ D F+ + V+ V+ + + ++GK+IH +LR+ + + +
Sbjct: 150 KEGVGCFRRMLVFGVRPDAFSLSIVVS--VMCKEGNFRREEGKQIHGFMLRNSLDTDSFL 207
Query: 225 MTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
T L+D+Y KFG A VF + K N V W+ MI + + + +L+L+
Sbjct: 208 KTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYML----- 262
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXX-----VHGFILRRGLDSIMPVINALITMYGRC 338
+ NSV +VS +H +++ GL + V +L++MY +C
Sbjct: 263 --AKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKC 320
Query: 339 GEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 398
G + E VF V + + WN++++ Y N YG A+ +F M + V P + V+
Sbjct: 321 GMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVI 380
Query: 399 CACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPG 458
CS GL GK + + L K I + ++ L + +A + + M E
Sbjct: 381 SCCSVLGLYNYGKSV-HAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSME-EKD 438
Query: 459 PTVWGSLL-GSCR 470
WGSL+ G C+
Sbjct: 439 MVAWGSLISGLCK 451
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 135/298 (45%), Gaps = 15/298 (5%)
Query: 8 QHVRQAPFQTHLCYTSHVSSRLPVCF--VSINPSANPV-KDIKSXXXXXXXQLIQSLCRG 64
+ V F+ + TS + S L + +P A V K ++ LI LC+
Sbjct: 393 KSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKN 452
Query: 65 GNHKQALEVLWSERN------PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPY 118
G K+AL+V ++ P + + +CA + G VH ++ +GL + +
Sbjct: 453 GKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVF 512
Query: 119 LATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG 178
+ + LI++Y + G + A KVF + WN+ + E ++L+ M G
Sbjct: 513 VGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQG 572
Query: 179 IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCI 238
I D + T VL V+ S L KGK +H LR G + H+ L+D+Y K G
Sbjct: 573 IFPDSVSITSVL----VAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFS 628
Query: 239 SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 296
YA ++F+ M K+ ++W+ MI Y + + AL LF +M + P+ VT +S+
Sbjct: 629 KYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEM--KKAGESPDDVTFLSL 684
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 285 bits (728), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 159/484 (32%), Positives = 260/484 (53%), Gaps = 28/484 (5%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
+ ++CA S+G ++ + S L D +A I+MY + +L A +VFDE R R
Sbjct: 388 VFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRD 447
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
WNA A G+G E L L+ M S I D FT+ +LKAC L G
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTGG-----SLGYGM 502
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSV----------------FRAMPAK 251
EIH++I++ G N V +L+D+Y+K G I A + M K
Sbjct: 503 EIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNK 562
Query: 252 N----SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 307
VSW+++I Y + A LF +M+ P+ T +V
Sbjct: 563 RLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI--TPDKFTYATVLDTCANLASAG 620
Query: 308 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 367
+H ++++ L S + + + L+ MY +CG++ +F+K D V+WN++I Y
Sbjct: 621 LGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYA 680
Query: 368 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGM 427
++G G++AIQ+FE MI + + P++++FI++L AC+H GL+++G F M Y + P +
Sbjct: 681 HHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQL 740
Query: 428 EHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH-CNAELAERASAMLF 486
HY+ MVD+LG++ ++ A++LI +MPFE +W +LLG C IH N E+AE A+A L
Sbjct: 741 PHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALL 800
Query: 487 ELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 546
L+P ++ Y LL+++YA+A MW V +R+ M L+K PGCSW+E+K +++ F+ +
Sbjct: 801 RLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGD 860
Query: 547 EDNP 550
+ +P
Sbjct: 861 KAHP 864
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 154/324 (47%), Gaps = 6/324 (1%)
Query: 83 KTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDE 142
+T ++++ C+ S G +H +V G D D A+ L++MY + + +VF
Sbjct: 181 RTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQG 240
Query: 143 TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYP 202
E+ W+A L+ +++M + Y VL++C ++
Sbjct: 241 IPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA----ALSE 296
Query: 203 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 262
L+ G ++HA+ L+ + + V T LD+YAK + A +F N S++AMI
Sbjct: 297 LRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITG 356
Query: 263 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 322
Y++ + KAL LFH+++ + +++ V ++G ++ L
Sbjct: 357 YSQEEHGFKALLLFHRLMSSGLG--FDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLS 414
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
+ V NA I MYG+C ++ RVFD+++ D VSWN++I+ + NG G + + +F +M
Sbjct: 415 LDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 383 IHQGVSPSYISFITVLCACSHAGL 406
+ + P +F ++L AC+ L
Sbjct: 475 LRSRIEPDEFTFGSILKACTGGSL 498
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 175/405 (43%), Gaps = 40/405 (9%)
Query: 81 SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVF 140
S + + CA++ + G+ H +++ SG ++ L+ +Y A VF
Sbjct: 47 STTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVF 106
Query: 141 DETRERTIYIW----------------NAFFRAL-------------AMVGRGEEL--LE 169
D+ R + W N+FF + + GE L +E
Sbjct: 107 DKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIE 166
Query: 170 LYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLL 229
++ M GI D T+ +LK C E G +IH ++R G + ++ + LL
Sbjct: 167 VFVDMGREGIEFDGRTFAIILKVCSFLE----DTSLGMQIHGIVVRVGCDTDVVAASALL 222
Query: 230 DVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPN 289
D+YAK + VF+ +P KNSVSWSA+I +N++ AL+ F +M + ++ +
Sbjct: 223 DMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEM--QKVNAGVS 280
Query: 290 SVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFD 349
SV +H L+ + V A + MY +C + + +FD
Sbjct: 281 QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD 340
Query: 350 KVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA-GLVE 408
+N + S+N++I+ Y +G KA+ +F ++ G+ IS V AC+ GL E
Sbjct: 341 NSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
+I ++ S + + + A +D+ G+ L EA ++ ++M
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAA--IDMYGKCQALAEAFRVFDEM 443
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 180/411 (43%), Gaps = 29/411 (7%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
+++SCA S G +H + + S D + T ++MY + ++ A+ +FD +
Sbjct: 287 VLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLN 346
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
+NA + G + L L+ ++ SG+ D + + V +AC + V L +G
Sbjct: 347 RQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACAL----VKGLSEGL 402
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
+I+ ++ ++ V +D+Y K ++ A VF M +++VSW+A+I + +N
Sbjct: 403 QIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNG 462
Query: 268 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV 327
+ L LF M+ + P+ T S+ +H I++ G+ S V
Sbjct: 463 KGYETLFLFVSMLRSRIE--PDEFTFGSI-LKACTGGSLGYGMEIHSSIVKSGMASNSSV 519
Query: 328 INALITMYGRCGEISIGERV----------------FDKVKNPDV----VSWNSLISMYG 367
+LI MY +CG I E++ +K+ N + VSWNS+IS Y
Sbjct: 520 GCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYV 579
Query: 368 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGM 427
+ A +F M+ G++P ++ TVL C++ GK + ++ K + +
Sbjct: 580 MKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKK-ELQSDV 638
Query: 428 EHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
+ +VD+ + L ++ +L+ + W +++ H E A
Sbjct: 639 YICSTLVDMYSKCGDLHDS-RLMFEKSLRRDFVTWNAMICGYAHHGKGEEA 688
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
P T ++ +CA +S G+ +H ++ L D Y+ + L++MY + G L +R
Sbjct: 600 TPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRL 659
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
+F+++ R WNA A G+GEE ++L+ +M I + T+ +L+AC
Sbjct: 660 MFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACA---- 715
Query: 199 SVYPLQKGKEIHANILR-HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSW 256
+ + KG E + R +G + + + ++D+ K G + A + R MP + + V W
Sbjct: 716 HMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIW 775
Query: 257 SAMIG 261
++G
Sbjct: 776 RTLLG 780
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 158/441 (35%), Positives = 256/441 (58%), Gaps = 15/441 (3%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDE--TRE 145
L+++C + G VH + L + +++KL+ +Y G + A +VFD R+
Sbjct: 98 LLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMSKRD 157
Query: 146 RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQK 205
+ + WN+ A +G+ E+ + LY QM G+ DRFT+ VLKAC + +Q
Sbjct: 158 SSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKAC----GGIGSVQI 213
Query: 206 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 265
G+ IH ++++ G+ +++V+ L+ +YAK G I A +VF +P K+ VSW++M+ Y
Sbjct: 214 GEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLH 273
Query: 266 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 325
+ + +AL++F MV + P+ V + SV +HG+++RRG++ +
Sbjct: 274 HGLLHEALDIFRLMVQNGIE--PDKVAISSVLARVLSFKHGRQ---LHGWVIRRGMEWEL 328
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
V NALI +Y + G++ +FD++ D VSWN++IS + N G ++ FE M
Sbjct: 329 SVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFEQMHRA 385
Query: 386 GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDE 445
P I+F++VL C++ G+VE+G+ LF M +Y I P MEHYACMV+L GRA ++E
Sbjct: 386 NAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEE 445
Query: 446 AIKLI-EDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYA 504
A +I ++M E GPTVWG+LL +C +H N ++ E A+ LFELEP N N+ LL IY+
Sbjct: 446 AYSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYS 505
Query: 505 EAKMWSDVKSVRKLMGKRVLQ 525
+AK DV+ VR++M R L+
Sbjct: 506 KAKRAEDVERVRQMMVDRGLE 526
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 139/313 (44%), Gaps = 29/313 (9%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T ++++C S G +HR LV G D Y+ L+ MY + G + AR V
Sbjct: 193 PDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNV 252
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FD + WN+ G E L+++R M +GI D+ + VL
Sbjct: 253 FDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLA-------R 305
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
V + G+++H ++R G E + V L+ +Y+K G + A +F M +++VSW+A+
Sbjct: 306 VLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAI 365
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I ++KN +K E H+ ++ P+ +T VSV + + +
Sbjct: 366 ISAHSKNSNGLKYFEQMHR-----ANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKE 420
Query: 320 -GLDSIMPVINALITMYGRCGEISIGERVFDKV-------KNPDVVSWNSLI---SMYGN 368
G+D M ++ +YGR G + E + + P V W +L+ ++GN
Sbjct: 421 YGIDPKMEHYACMVNLYGRAGMM---EEAYSMIVQEMGLEAGPTV--WGALLYACYLHGN 475
Query: 369 NGYGKKAIQ-IFE 380
G+ A Q +FE
Sbjct: 476 TDIGEVAAQRLFE 488
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 284 bits (726), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 158/467 (33%), Positives = 248/467 (53%), Gaps = 9/467 (1%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T+ ++ + A+ G +H +G Y+ T I++Y + G + +F E
Sbjct: 223 TLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF 282
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
R+ I +NA G E L L++++ SG R + ++ VS L
Sbjct: 283 RKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA---RLRSSTLVSLVPVSGH----L 335
Query: 204 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 263
IH L+ + + V T L VY+K I A +F P K+ SW+AMI Y
Sbjct: 336 MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 264 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 323
+N + A+ LF +M + + PN VT+ + VH + +S
Sbjct: 396 TQNGLTEDAISLFREM--QKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFES 453
Query: 324 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI 383
+ V ALI MY +CG I+ R+FD + + V+WN++IS YG +G G++A+ IF M+
Sbjct: 454 SIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEML 513
Query: 384 HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 443
+ G++P+ ++F+ VL ACSHAGLV+EG +F SM+ +Y P ++HYACMVD+LGRA L
Sbjct: 514 NSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHL 573
Query: 444 DEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIY 503
A++ IE M EPG +VW +LLG+CRIH + LA S LFEL+P N G +VLL++I+
Sbjct: 574 QRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIH 633
Query: 504 AEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
+ + + +VR+ KR L K PG + IE+ + + F S ++ +P
Sbjct: 634 SADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHP 680
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 175/387 (45%), Gaps = 15/387 (3%)
Query: 96 SSFSD---GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWN 152
S F D GR +H V G D + L + ++ MY + ++ ARKVFD E+ +WN
Sbjct: 130 SGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWN 189
Query: 153 AFFRALAMVGRGEELLELYRQM-NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHA 211
E ++++R + N S D T +L A V+E L+ G +IH+
Sbjct: 190 TMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA--VAELQ--ELRLGMQIHS 245
Query: 212 NILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVK 271
+ G + +V+T + +Y+K G I +++FR + V+++AMI Y N
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETEL 305
Query: 272 ALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINAL 331
+L LF +++L S T+VS+ +HG+ L+ S V AL
Sbjct: 306 SLSLFKELMLSGAR--LRSSTLVSL---VPVSGHLMLIYAIHGYCLKSNFLSHASVSTAL 360
Query: 332 ITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSY 391
T+Y + EI ++FD+ + SWN++IS Y NG + AI +F M SP+
Sbjct: 361 TTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNP 420
Query: 392 ISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIE 451
++ +L AC+ G + GK + + ++ + ++ + + + EA +L
Sbjct: 421 VTITCILSACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKCGSIAEARRLF- 478
Query: 452 DMPFEPGPTVWGSLLGSCRIHCNAELA 478
D+ + W +++ +H + A
Sbjct: 479 DLMTKKNEVTWNTMISGYGLHGQGQEA 505
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 187/399 (46%), Gaps = 18/399 (4%)
Query: 94 QKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNA 153
+ +S S H ++ G D L TKL +LG++ AR +F + ++++N
Sbjct: 29 RSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNV 88
Query: 154 FFRALAMVGRGEELLELYRQMNWS-GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHAN 212
R ++ L ++ + S + + TY + + A S F + G+ IH
Sbjct: 89 LMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAA--SGFR--DDRAGRVIHGQ 144
Query: 213 ILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 272
+ G + + + + ++ +Y KF + A VF MP K+++ W+ MI Y KN+M V++
Sbjct: 145 AVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVES 204
Query: 273 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALI 332
+++F ++ E+C + ++ T++ + +H + G S V+ I
Sbjct: 205 IQVFRDLINESCTRL-DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFI 263
Query: 333 TMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYI 392
++Y +CG+I +G +F + + PD+V++N++I Y +NG + ++ +F+ ++ G
Sbjct: 264 SLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSS 323
Query: 393 SFITVLCACSHAGLVE--EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 450
+ ++++ H L+ G L + LS + + + + N ++ A KL
Sbjct: 324 TLVSLVPVSGHLMLIYAIHGYCLKSNFLSHASVS------TALTTVYSKLNEIESARKLF 377
Query: 451 EDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
++ P + P+ W +++ + L E A ++ E++
Sbjct: 378 DESPEKSLPS-WNAMISG---YTQNGLTEDAISLFREMQ 412
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 99/193 (51%), Gaps = 6/193 (3%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG 131
E+ SE +P+ TI ++ +CAQ + S G+ VH + + + Y++T LI MY + G
Sbjct: 410 EMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCG 469
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
S+ AR++FD ++ WN + G+G+E L ++ +M SGI T+ VL
Sbjct: 470 SIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLY 529
Query: 192 ACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 250
AC + +++G EI +++ R+G+E ++ ++D+ + G + A AM
Sbjct: 530 ACSHAGL----VKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSI 585
Query: 251 K-NSVSWSAMIGC 262
+ S W ++G
Sbjct: 586 EPGSSVWETLLGA 598
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 283 bits (725), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 157/513 (30%), Positives = 263/513 (51%), Gaps = 33/513 (6%)
Query: 67 HKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINM 126
+KQ L E P H T VL + CA S G + +++ L+ ++ I+M
Sbjct: 141 YKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHM 200
Query: 127 YHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY 186
+ G ++ ARKVFDE+ R + WN +G E+ + +Y+ M G+ D T
Sbjct: 201 FASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTM 260
Query: 187 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 246
++ +C + + L +GKE + + +G I ++ L+D+++K G I A +F
Sbjct: 261 IGLVSSCSM----LGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFD 316
Query: 247 AMPAKNSVSWSAMIGCYAK-----------NDMPVKALELFHQMV--------------- 280
+ + VSW+ MI YA+ +DM K + L++ M+
Sbjct: 317 NLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALAL 376
Query: 281 ---LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR 337
++ ++ P+ +TM+ +H +I + L + + +L+ MY +
Sbjct: 377 FQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAK 436
Query: 338 CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
CG IS VF ++ + +++ ++I +G AI F MI G++P I+FI +
Sbjct: 437 CGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGL 496
Query: 398 LCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEP 457
L AC H G+++ G+ F M S++ ++P ++HY+ MVDLLGRA L+EA +L+E MP E
Sbjct: 497 LSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESMPMEA 556
Query: 458 GPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRK 517
VWG+LL CR+H N EL E+A+ L EL+P ++G YVLL +Y EA MW D K R+
Sbjct: 557 DAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMWEDAKRARR 616
Query: 518 LMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
+M +R ++K+PGCS IEV + F+ ++ P
Sbjct: 617 MMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRP 649
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 170/413 (41%), Gaps = 44/413 (10%)
Query: 102 RDVHRYLVDSGLDQDPYLATKLINM--YHELGSLDCARKVFDETRERTIYIWNAFFRALA 159
+ + ++ +GL DP+ +++LI E LD + K+ I+ WN R +
Sbjct: 70 KQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPNIFSWNVTIRGFS 129
Query: 160 MVGRGEELLELYRQMNWSGIPS---DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRH 216
+E LY+QM G D FTY + K C S G I ++L+
Sbjct: 130 ESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS----SLGHMILGHVLKL 185
Query: 217 GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELF 276
E HV + ++A G + A VF P ++ VSW+ +I Y K KA+ ++
Sbjct: 186 RLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVY 245
Query: 277 HQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYG 336
M E P+ VTM+ + + ++ GL +P++NAL+ M+
Sbjct: 246 KLMESEGVK--PDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFS 303
Query: 337 RCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY------------------------- 371
+CG+I R+FD ++ +VSW ++IS Y G
Sbjct: 304 KCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGG 363
Query: 372 ------GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 425
G+ A+ +F+ M P I+ I L ACS G ++ G I + KY +
Sbjct: 364 SVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVG-IWIHRYIEKYSLSL 422
Query: 426 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
+ +VD+ + + EA+ + + T + +++G +H +A A
Sbjct: 423 NVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLT-YTAIIGGLALHGDASTA 474
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 127/287 (44%), Gaps = 35/287 (12%)
Query: 238 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA-CDSIPNSVTMVSV 296
+ Y+ + + + N SW+ I +++++ P ++ L+ QM+ C+S P+ T +
Sbjct: 103 LDYSVKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVL 162
Query: 297 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV 356
+ G +L+ L+ + V NA I M+ CG++ +VFD+ D+
Sbjct: 163 FKVCADLRLSSLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL 222
Query: 357 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE- 415
VSWN LI+ Y G +KAI +++ M +GV P ++ I ++ +CS G + GK +E
Sbjct: 223 VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEY 282
Query: 416 -----------------SMLSK-------YRIHPGMEH-----YACMVDLLGRANRLDEA 446
M SK RI +E + M+ R LD +
Sbjct: 283 VKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVS 342
Query: 447 IKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNA 493
KL +DM E +W +++G A+ + A A+ E++ N
Sbjct: 343 RKLFDDME-EKDVVLWNAMIGGS---VQAKRGQDALALFQEMQTSNT 385
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 165/515 (32%), Positives = 260/515 (50%), Gaps = 22/515 (4%)
Query: 42 PVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWSER----NPSHKTIEVLIQSCAQKSS 97
P +DI S +C G LE+ ++ R +P T+ +I +C
Sbjct: 258 PRRDIISWNAMISGYFENGMCHEG-----LELFFAMRGLSVDPDLMTLTSVISACELLGD 312
Query: 98 FSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRA 157
GRD+H Y++ +G D + L MY GS A K+F + I W
Sbjct: 313 RRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISG 372
Query: 158 LAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG 217
++ ++ YR M+ + D T VL AC ++ L G E+H ++
Sbjct: 373 YEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACA----TLGDLDTGVELHKLAIKAR 428
Query: 218 YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFH 277
+ V L+++Y+K CI A +F +P KN +SW+++I N+ +AL
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 278 QMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG--LDSIMPVINALITMY 335
QM + PN++T+ + +H +LR G LD +P NAL+ MY
Sbjct: 489 QMKMTL---QPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLP--NALLDMY 543
Query: 336 GRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 395
RCG ++ F+ K DV SWN L++ Y G G +++F+ M+ V P I+FI
Sbjct: 544 VRCGRMNTAWSQFNSQKK-DVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFI 602
Query: 396 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPF 455
++LC CS + +V +G + F M Y + P ++HYAC+VDLLGRA L EA K I+ MP
Sbjct: 603 SLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPV 661
Query: 456 EPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSV 515
P P VWG+LL +CRIH +L E ++ +FEL+ + G Y+LL ++YA+ W +V V
Sbjct: 662 TPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKV 721
Query: 516 RKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
R++M + L GCSW+EVK K+++F+S ++ +P
Sbjct: 722 RRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHP 756
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/424 (27%), Positives = 201/424 (47%), Gaps = 21/424 (4%)
Query: 58 IQSLCRGGNHKQALEVLWSERNPSHKTIE----VLIQSCAQKSSFSDGRDVHRYLVDSGL 113
+ LC G ++A+++L S + E L++ C K + +G V+ + S
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQ 173
L + M+ G+L A VF + ER ++ WN A G +E + LY +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 174 MNW-SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
M W G+ D +T+ VL+ C + L +GKE+H +++R+GYE +I V+ L+ +Y
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTC----GGIPDLARGKEVHVHVVRYGYELDIDVVNALITMY 241
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
K G + A +F MP ++ +SW+AMI Y +N M + LELF M + D P+ +T
Sbjct: 242 VKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVD--PDLMT 299
Query: 293 MVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK 352
+ SV +H +++ G + V N+L MY G E++F +++
Sbjct: 300 LTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRME 359
Query: 353 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG-- 410
D+VSW ++IS Y N KAI + M V P I+ VL AC+ G ++ G
Sbjct: 360 RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Query: 411 --KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
K+ ++ L Y I ++++ + +D+A+ + ++P W S++
Sbjct: 420 LHKLAIKARLISYVIVANN-----LINMYSKCKCIDKALDIFHNIP-RKNVISWTSIIAG 473
Query: 469 CRIH 472
R++
Sbjct: 474 LRLN 477
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 169/369 (45%), Gaps = 12/369 (3%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T ++++C + G++VH ++V G + D + LI MY + G + AR +
Sbjct: 194 PDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLL 253
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FD R I WNA G E LEL+ M + D T T V+ AC +
Sbjct: 254 FDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACEL---- 309
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
+ + G++IHA ++ G+ +I V +L +Y G A +F M K+ VSW+ M
Sbjct: 310 LGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTM 369
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I Y N +P KA++ + M ++ P+ +T+ +V +H ++
Sbjct: 370 ISGYEYNFLPDKAIDTYRMMDQDSVK--PDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
L S + V N LI MY +C I +F + +V+SW S+I+ N +A+ IF
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL-IF 486
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA--CMVDLL 437
+ + P+ I+ L AC+ G + GK + +L R G++ + ++D+
Sbjct: 487 LRQMKMTLQPNAITLTAALAACARIGALMCGKEIHAHVL---RTGVGLDDFLPNALLDMY 543
Query: 438 GRANRLDEA 446
R R++ A
Sbjct: 544 VRCGRMNTA 552
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 263/477 (55%), Gaps = 14/477 (2%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T +++C ++ G +H + + G + + L++MY + G ++ A KV
Sbjct: 105 PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 164
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS--DRFTYTYVLKACVVSE 197
F +R++ WNA G G + L+ + M + I D FT T +LKAC
Sbjct: 165 FRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACS--- 221
Query: 198 FSVYPLQKGKEIHANILRHGYE--ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 255
S + GK+IH ++R G+ + + +L+D+Y K G + A F + K +S
Sbjct: 222 -STGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMIS 280
Query: 256 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 315
WS++I YA+ V+A+ LF + L+ +S +S + S+ +
Sbjct: 281 WSSLILGYAQEGEFVEAMGLFKR--LQELNSQIDSFALSSIIGVFADFALLRQGKQMQAL 338
Query: 316 ILR--RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 373
++ GL++ V+N+++ MY +CG + E+ F +++ DV+SW +I+ YG +G GK
Sbjct: 339 AVKLPSGLET--SVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGK 396
Query: 374 KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACM 433
K+++IF M+ + P + ++ VL ACSH+G+++EG+ LF +L + I P +EHYAC+
Sbjct: 397 KSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACV 456
Query: 434 VDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNA 493
VDLLGRA RL EA LI+ MP +P +W +LL CR+H + EL + +L ++ N
Sbjct: 457 VDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNP 516
Query: 494 GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
NYV+++++Y +A W++ + R+L + L+K G SW+E++++++ F S E+ +P
Sbjct: 517 ANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHP 573
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 177/373 (47%), Gaps = 11/373 (2%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
+++ C +K G VH YL+ SG + + LI+MY + A KVFD ER
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERN 71
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
+ W+A + G + L L+ +M GI + FT++ LKAC + + L+KG
Sbjct: 72 VVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGL----LNALEKGL 127
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
+IH L+ G+E + V +L+D+Y+K G I+ A VFR + ++ +SW+AMI +
Sbjct: 128 QIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 268 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD--SIM 325
KAL+ F M P+ T+ S+ +HGF++R G S
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
+ +L+ +Y +CG + + FD++K ++SW+SLI Y G +A+ +F+ +
Sbjct: 248 TITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQEL 307
Query: 386 GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA--CMVDLLGRANRL 443
+ +++ + L+ +GK + ++ G+E +VD+ + +
Sbjct: 308 NSQIDSFALSSIIGVFADFALLRQGK---QMQALAVKLPSGLETSVLNSVVDMYLKCGLV 364
Query: 444 DEAIKLIEDMPFE 456
DEA K +M +
Sbjct: 365 DEAEKCFAEMQLK 377
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 162/357 (45%), Gaps = 19/357 (5%)
Query: 36 INPSANPVKDIKSXXXXXXXQLIQSLCRGGNHKQALEV--LWSERN----PSHKTIEVLI 89
IN + + I +I G +AL+ + E N P T+ L+
Sbjct: 158 INEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLL 217
Query: 90 QSCAQKSSFSDGRDVHRYLVDSGLD--QDPYLATKLINMYHELGSLDCARKVFDETRERT 147
++C+ G+ +H +LV SG + L+++Y + G L ARK FD+ +E+T
Sbjct: 218 KACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKT 277
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
+ W++ A G E + L++++ D F + ++ V ++F++ L++GK
Sbjct: 278 MISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIG--VFADFAL--LRQGK 333
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
++ A ++ V+ +++D+Y K G + A F M K+ +SW+ +I Y K+
Sbjct: 334 QMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHG 393
Query: 268 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR-RGLDSIMP 326
+ K++ +F++M+ + P+ V ++V + +L G+ +
Sbjct: 394 LGKKSVRIFYEMLRHNIE--PDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 451
Query: 327 VINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLISM---YGNNGYGKKAIQIF 379
++ + GR G + + + D + P+V W +L+S+ +G+ GK+ +I
Sbjct: 452 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKIL 508
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 82/173 (47%), Gaps = 18/173 (10%)
Query: 287 IPNS-VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGE 345
IPN +VS+ VH ++L+ G + N LI MY +C E +
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 346 RVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 405
+VFD + +VVSW++L+S + NG K ++ +F M QG+ P+ +F T L AC
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 406 LVEEG--------KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 450
+E+G KI FE M+ E +VD+ + R++EA K+
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMV---------EVGNSLVDMYSKCGRINEAEKVF 165
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 156/453 (34%), Positives = 245/453 (54%), Gaps = 30/453 (6%)
Query: 106 RYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGE 165
R DS +D +I Y + G +D AR++FDE+ + ++ W A E
Sbjct: 239 RQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE 298
Query: 166 ELLELYRQMNWSGIPSDRFTYTYVLKACVVSE--------FSVYPLQKGKEIHANILRHG 217
E EL+ +M + ++ +L V E F V P +
Sbjct: 299 EARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR------------- 341
Query: 218 YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFH 277
N+ T++ YA+ G IS A ++F MP ++ VSW+AMI Y+++ +AL LF
Sbjct: 342 ---NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 278 QMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR 337
QM E N + S +HG +++ G ++ V NAL+ MY +
Sbjct: 399 QMEREG--GRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCK 456
Query: 338 CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
CG I +F ++ D+VSWN++I+ Y +G+G+ A++ FE+M +G+ P + + V
Sbjct: 457 CGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAV 516
Query: 398 LCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEP 457
L ACSH GLV++G+ F +M Y + P +HYACMVDLLGRA L++A L+++MPFEP
Sbjct: 517 LSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP 576
Query: 458 GPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRK 517
+WG+LLG+ R+H N ELAE A+ +F +EP N+G YVLL+++YA + W DV +R
Sbjct: 577 DAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRV 636
Query: 518 LMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
M + ++KVPG SWIE++ K ++F +E +P
Sbjct: 637 RMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHP 669
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 159/371 (42%), Gaps = 50/371 (13%)
Query: 123 LINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR-QMNWSGIPS 181
+++ Y + G +D AR VFD E+ WNA A + EE L++ + NW+ +
Sbjct: 163 MLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSW 222
Query: 182 DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 241
+ +V K +V + +++ + T++ YA+ G I A
Sbjct: 223 NCLLGGFVKKKKIVEARQFFDSMNVRDVVS-------------WNTIITGYAQSGKIDEA 269
Query: 242 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP--NSVTMVSVXXX 299
+F P ++ +W+AM+ Y +N M +A ELF D +P N V+ ++
Sbjct: 270 RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF--------DKMPERNEVSWNAMLAG 321
Query: 300 XXXXXXXXXXXXVHGFILRRGLDSIMP-----VINALITMYGRCGEISIGERVFDKVKNP 354
+ + L +MP N +IT Y +CG+IS + +FDK+
Sbjct: 322 YVQGERME---------MAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
Query: 355 DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILF 414
D VSW ++I+ Y +G+ +A+++F M +G + SF + L C+ +E GK L
Sbjct: 373 DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLH 432
Query: 415 ESMLSKYRIHPGMEHYACMVD-----LLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
R+ G C V + + ++EA L ++M + W +++
Sbjct: 433 G------RLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKD-IVSWNTMIAGY 485
Query: 470 RIHCNAELAER 480
H E+A R
Sbjct: 486 SRHGFGEVALR 496
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 136/348 (39%), Gaps = 69/348 (19%)
Query: 123 LINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM---VGRGEELLELYRQMNWSGI 179
+I+ Y G + ARK+FDE ER + WN + +G+ EL E+ +
Sbjct: 101 MISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEI--------M 152
Query: 180 PSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS 239
P E ++ T+L YA+ GC+
Sbjct: 153 P--------------------------------------ERDVCSWNTMLSGYAQNGCVD 174
Query: 240 YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX 299
A SVF MP KN VSW+A++ Y +N +A LF + +VS
Sbjct: 175 DARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS---------RENWALVSWNCL 225
Query: 300 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 359
F + ++ N +IT Y + G+I ++FD+ DV +W
Sbjct: 226 LGGFVKKKKIVEARQFFDSMNVRDVVS-WNTIITGYAQSGKIDEARQLFDESPVQDVFTW 284
Query: 360 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 419
+++S Y N ++A ++F+ M + + +S+ +L +E K LF+ M
Sbjct: 285 TAMVSGYIQNRMVEEARELFDKMPER----NEVSWNAMLAGYVQGERMEMAKELFDVMPC 340
Query: 420 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
+ + + M+ + ++ EA L + MP + P W +++
Sbjct: 341 R-----NVSTWNTMITGYAQCGKISEAKNLFDKMP-KRDPVSWAAMIA 382
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 79/175 (45%), Gaps = 6/175 (3%)
Query: 89 IQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTI 148
+ +CA + G+ +H LV G + ++ L+ MY + GS++ A +F E + I
Sbjct: 416 LSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDI 475
Query: 149 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 208
WN + G GE L + M G+ D T VL AC + + KG++
Sbjct: 476 VSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL----VDKGRQ 531
Query: 209 IHANILR-HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIG 261
+ + +G N ++D+ + G + A+++ + MP + ++ W ++G
Sbjct: 532 YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLG 586
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 139/349 (39%), Gaps = 82/349 (23%)
Query: 219 EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 278
+ +I + Y + G + A VF+ MP +SVS++ MI Y +N A +LF
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLF-- 118
Query: 279 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS------IMP-----V 327
D +P +VS + G++ R L IMP
Sbjct: 119 ------DEMPER-DLVS------------WNVMIKGYVRNRNLGKARELFEIMPERDVCS 159
Query: 328 INALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN------------------ 369
N +++ Y + G + VFD++ + VSWN+L+S Y N
Sbjct: 160 WNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWAL 219
Query: 370 --------GYGKK-----AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFES 416
G+ KK A Q F++M + V +S+ T++ + +G ++E + LF+
Sbjct: 220 VSWNCLLGGFVKKKKIVEARQFFDSMNVRDV----VSWNTIITGYAQSGKIDEARQLFDE 275
Query: 417 MLSKYRIHPGME--HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCN 474
P + + MV + ++EA +L + MP E W ++L +
Sbjct: 276 -------SPVQDVFTWTAMVSGYIQNRMVEEARELFDKMP-ERNEVSWNAMLAG---YVQ 324
Query: 475 AELAERASAMLFELEP-WNAGNYVLLADIYAEAKMWSDVKSVRKLMGKR 522
E E A LF++ P N + + YA+ S+ K++ M KR
Sbjct: 325 GERMEMAKE-LFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKR 372
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 156/488 (31%), Positives = 251/488 (51%), Gaps = 39/488 (7%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
++++ ++ S+ +G ++H DP++ T ++MY G ++ AR VFDE R
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRD 176
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
+ WN G +E +L+ +M S + D ++ AC + ++ +
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTG----NMRYNR 232
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS-------------- 253
I+ ++ + + H++T L+ +YA GC+ A FR M +N
Sbjct: 233 AIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCG 292
Query: 254 -----------------VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVS 295
V W+ MI Y ++D P +AL +F +M C I P+ V+M S
Sbjct: 293 RLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEM---CCSGIKPDVVSMFS 349
Query: 296 VXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD 355
V VH I GL+S + + NALI MY +CG + VF+K+ +
Sbjct: 350 VISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN 409
Query: 356 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE 415
VVSW+S+I+ +G A+ +F M + V P+ ++F+ VL CSH+GLVEEGK +F
Sbjct: 410 VVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA 469
Query: 416 SMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNA 475
SM +Y I P +EHY CMVDL GRAN L EA+++IE MP +WGSL+ +CRIH
Sbjct: 470 SMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGEL 529
Query: 476 ELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV 535
EL + A+ + ELEP + G VL+++IYA + W DV+++R++M ++ + K G S I+
Sbjct: 530 ELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQ 589
Query: 536 KKKIYSFV 543
K + F+
Sbjct: 590 NGKSHEFL 597
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 164/360 (45%), Gaps = 39/360 (10%)
Query: 150 IWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEI 209
++N F R L+ + Y+++ G D+F++ +LKA VS+ S L +G E+
Sbjct: 78 VFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKA--VSKVS--ALFEGMEL 133
Query: 210 HANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMP 269
H + + V T +D+YA G I+YA +VF M ++ V+W+ MI Y + +
Sbjct: 134 HGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLV 193
Query: 270 VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 329
+A +LF +M + + +P+ + + ++ ++ F++ + ++
Sbjct: 194 DEAFKLFEEM--KDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLT 251
Query: 330 ALITMYG-------------------------------RCGEISIGERVFDKVKNPDVVS 358
AL+TMY +CG + + +FD+ + D+V
Sbjct: 252 ALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVC 311
Query: 359 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 418
W ++IS Y + Y ++A+++FE M G+ P +S +V+ AC++ G++++ K + S +
Sbjct: 312 WTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWV-HSCI 370
Query: 419 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
+ + ++++ + LD + E MP W S++ + +H A A
Sbjct: 371 HVNGLESELSINNALINMYAKCGGLDATRDVFEKMP-RRNVVSWSSMINALSMHGEASDA 429
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 97/213 (45%), Gaps = 3/213 (1%)
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIGCYAK 265
K++HA+ILR ++ L V + +SYA +VF ++P+ S+ ++ + ++
Sbjct: 29 KQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIVFNPFLRDLSR 88
Query: 266 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 325
+ P +A LF+Q + + + + + + +HG +
Sbjct: 89 SSEP-RATILFYQRIRHVGGRL-DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDP 146
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
V + MY CG I+ VFD++ + DVV+WN++I Y G +A ++FE M
Sbjct: 147 FVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDS 206
Query: 386 GVSPSYISFITVLCACSHAGLVEEGKILFESML 418
V P + ++ AC G + + ++E ++
Sbjct: 207 NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLI 239
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 281 bits (719), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 174/547 (31%), Positives = 284/547 (51%), Gaps = 18/547 (3%)
Query: 9 HVRQAPFQTHLCYTSHVSSRLPVCFVSINPSANPVKDIKSXXXXXXXQLIQSLCRGGNHK 68
H+ ++PF + + + C S++ +A + + ++ C+ G+
Sbjct: 77 HLIKSPFWSDVFVGTATVDMFVKC-NSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTD 135
Query: 69 QAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLI 124
+A E+ +E P T+ LIQS + + S +H + G+D +A I
Sbjct: 136 KAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWI 195
Query: 125 NMYHELGSLDCARKVFD--ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSD 182
+ Y + G LD A+ VF+ + +RT+ WN+ F+A ++ G + LY M D
Sbjct: 196 STYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPD 255
Query: 183 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 242
T+ + +C E L +G+ IH++ + G +++I + T + +Y+K A
Sbjct: 256 LSTFINLAASCQNPE----TLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 243 SVFRAMPAKNSVSWSAMIGCYA-KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 301
+F M ++ VSW+ MI YA K DM +AL LFH M+ P+ VT++S+
Sbjct: 312 LLFDIMTSRTCVSWTVMISGYAEKGDMD-EALALFHAMIKSG--EKPDLVTLLSLISGCG 368
Query: 302 XXXXXXXXXXVHGFILRRGL--DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 359
+ G D++M + NALI MY +CG I +FD VV+W
Sbjct: 369 KFGSLETGKWIDARADIYGCKRDNVM-ICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 360 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 419
++I+ Y NG +A+++F MI P++I+F+ VL AC+H+G +E+G F M
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 420 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAE 479
Y I PG++HY+CMVDLLGR +L+EA++LI +M +P +WG+LL +C+IH N ++AE
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 547
Query: 480 RASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKI 539
+A+ LF LEP A YV +A+IYA A MW +R +M +R ++K PG S I+V K
Sbjct: 548 QAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Query: 540 YSFVSSE 546
+SF E
Sbjct: 608 HSFTVGE 614
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 170/400 (42%), Gaps = 29/400 (7%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P++ T + ++CA+ + VH +L+ S D ++ T ++M+ + S+D A KV
Sbjct: 50 PNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKV 109
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F+ ER WNA G ++ L+R+M + I D T ++++ +
Sbjct: 110 FERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEK-- 167
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP--AKNSVSWS 257
L+ + +HA +R G + + V T + Y K G + A VF A+ + VSW+
Sbjct: 168 --SLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWN 225
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
+M Y+ A L+ M+ E + P+ T +++ +H +
Sbjct: 226 SMFKAYSVFGEAFDAFGLYCLMLRE--EFKPDLSTFINLAASCQNPETLTQGRLIHSHAI 283
Query: 318 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
G D + IN I+MY + + +FD + + VSW +IS Y G +A+
Sbjct: 284 HLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALA 343
Query: 378 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC----- 432
+F MI G P ++ ++++ C G +E GK I + Y C
Sbjct: 344 LFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK----------WIDARADIYGCKRDNV 393
Query: 433 -----MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
++D+ + + EA + ++ P E W +++
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFDNTP-EKTVVTWTTMIA 432
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 142/295 (48%), Gaps = 13/295 (4%)
Query: 137 RKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVS 196
R+++ + ++ WN R E L L+R+M G + FT+ +V KAC
Sbjct: 6 RRLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACA-- 63
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 256
+ + + +HA++++ + ++ V T +D++ K + YA VF MP +++ +W
Sbjct: 64 --RLADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTW 121
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
+AM+ + ++ KA LF +M L + P+SVT++++ +H
Sbjct: 122 NAMLSGFCQSGHTDKAFSLFREMRLN--EITPDSVTVMTLIQSASFEKSLKLLEAMHAVG 179
Query: 317 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD--VVSWNSLISMYGNNGYGKK 374
+R G+D + V N I+ YG+CG++ + VF+ + D VVSWNS+ Y G
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD 239
Query: 375 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
A ++ M+ + P +FI + +C + + +G+ ++ + IH G +
Sbjct: 240 AFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGR-----LIHSHAIHLGTDQ 289
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/485 (32%), Positives = 261/485 (53%), Gaps = 42/485 (8%)
Query: 102 RDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMV 161
+ H Y++ +GL++D K I G L A VF Y+ N RAL+++
Sbjct: 32 KQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHNTMIRALSLL 91
Query: 162 GRGEE---LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY 218
+ +YR++ D FT+ +VLK V V + G++IH ++ G+
Sbjct: 92 DEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAV----RVSDVWFGRQIHGQVVVFGF 147
Query: 219 EENIHVMTTLLDVY-------------------------------AKFGCISYANSVFRA 247
+ ++HV+T L+ +Y K G + A S+
Sbjct: 148 DSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 248 MP--AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 305
MP +N VSW+ +I YAK+ +A+E+F +M++E + P+ VT+++V
Sbjct: 208 MPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVE--PDEVTLLAVLSACADLGS 265
Query: 306 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 365
+ ++ RG++ + + NA+I MY + G I+ VF+ V +VV+W ++I+
Sbjct: 266 LELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAG 325
Query: 366 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 425
+G+G +A+ +F M+ GV P+ ++FI +L ACSH G V+ GK LF SM SKY IHP
Sbjct: 326 LATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHP 385
Query: 426 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 485
+EHY CM+DLLGRA +L EA ++I+ MPF+ +WGSLL + +H + EL ERA + L
Sbjct: 386 NIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELGERALSEL 445
Query: 486 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 545
+LEP N+GNY+LLA++Y+ W + + +R +M ++K+ G S IEV+ ++Y F+S
Sbjct: 446 IKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISG 505
Query: 546 EEDNP 550
+ +P
Sbjct: 506 DLTHP 510
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 140/341 (41%), Gaps = 79/341 (23%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T +++ + S GR +H +V G D ++ T LI MY G L ARK+
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKM 173
Query: 140 FDETRERTIYIWNAFF------------RAL---------------------AMVGRGEE 166
FDE + + +WNA R+L A GR E
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 167 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMT 226
+E++++M + D T VL AC + L+ G+ I + + G + +
Sbjct: 234 AIEVFQRMLMENVEPDEVTLLAVLSACA----DLGSLELGERICSYVDHRGMNRAVSLNN 289
Query: 227 TLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS 286
++D+YAK G I+ A VF + +N V+W+ +I A + +AL +F++MV
Sbjct: 290 AVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVR- 348
Query: 287 IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGER 346
PN VT + A+++ G + +G+R
Sbjct: 349 -PNDVTFI-----------------------------------AILSACSHVGWVDLGKR 372
Query: 347 VFDKVK-----NPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
+F+ ++ +P++ + +I + G G ++A ++ ++M
Sbjct: 373 LFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 98/211 (46%), Gaps = 10/211 (4%)
Query: 57 LIQSLCRGGNHKQALEV----LWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + G +A+EV L P T+ ++ +CA S G + Y+ G
Sbjct: 221 VISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRG 280
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+++ L +I+MY + G++ A VF+ ER + W LA G G E L ++
Sbjct: 281 MNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFN 340
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHVMTTLLDV 231
+M +G+ + T+ +L AC V + GK + ++ ++G NI ++D+
Sbjct: 341 RMVKAGVRPNDVTFIAILSACS----HVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDL 396
Query: 232 YAKFGCISYANSVFRAMPAK-NSVSWSAMIG 261
+ G + A+ V ++MP K N+ W +++
Sbjct: 397 LGRAGKLREADEVIKSMPFKANAAIWGSLLA 427
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 251/451 (55%), Gaps = 7/451 (1%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
G +H + S L + L +MY G L+ AR+VFD+ WN LA
Sbjct: 289 GSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLAN 348
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 220
G +E + ++ QM SG D + L++ + ++ L +G +IH+ I++ G+
Sbjct: 349 NGYADEAVSVFSQMRSSGFIPDAIS----LRSLLCAQTKPMALSQGMQIHSYIIKWGFLA 404
Query: 221 NIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQM 279
++ V +LL +Y + ++F +SVSW+ ++ +++ PV+ L LF M
Sbjct: 405 DLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLM 464
Query: 280 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 339
++ C+ P+ +TM ++ VH + L+ GL + N LI MY +CG
Sbjct: 465 LVSECE--PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCG 522
Query: 340 EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
+ R+FD + N DVVSW++LI Y +G+G++A+ +F+ M G+ P++++F+ VL
Sbjct: 523 SLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLT 582
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 459
ACSH GLVEEG L+ +M +++ I P EH +C+VDLL RA RL+EA + I++M EP
Sbjct: 583 ACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDV 642
Query: 460 TVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 519
VW +LL +C+ N LA++A+ + +++P+N+ +VLL ++A + W + +R M
Sbjct: 643 VVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSM 702
Query: 520 GKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
K ++K+PG SWIE++ KI+ F + + +P
Sbjct: 703 KKHDVKKIPGQSWIEIEDKIHIFFAEDIFHP 733
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 212/453 (46%), Gaps = 13/453 (2%)
Query: 25 VSSRLPVCFVSINPSANPVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVL-WSERNPSHK 83
+ +R+ V I +++ V IK+ I SLC+ +++ALE ++++N S K
Sbjct: 7 LGARVSVSNSQILATSSVVSTIKTEELMNDH--INSLCKSNFYREALEAFDFAQKNSSFK 64
Query: 84 ----TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
T LI +C+ S + GR +H ++++S D L +++MY + GSL AR+V
Sbjct: 65 IRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREV 124
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FD ER + + + + G+G E + LY +M + D+F + ++KAC S
Sbjct: 125 FDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSS-- 182
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
+ GK++HA +++ ++ L+ +Y +F +S A+ VF +P K+ +SWS++
Sbjct: 183 --DVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSI 240
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I +++ +AL +M L PN S +HG ++
Sbjct: 241 IAGFSQLGFEFEALSHLKEM-LSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
L +L MY RCG ++ RVFD+++ PD SWN +I+ NNGY +A+ +F
Sbjct: 300 ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVF 359
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 439
M G P IS ++LCA + + +G + S + K+ + ++ +
Sbjct: 360 SQMRSSGFIPDAISLRSLLCAQTKPMALSQG-MQIHSYIIKWGFLADLTVCNSLLTMYTF 418
Query: 440 ANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
+ L L ED W ++L +C H
Sbjct: 419 CSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 22/243 (9%)
Query: 27 SRLPVCFVSINPSANPVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLW-------SERN 79
S L CF N +D ++ I + C H+Q +E+L SE
Sbjct: 420 SDLYCCF-------NLFEDFRNNADSVSWNTILTACL--QHEQPVEMLRLFKLMLVSECE 470
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P H T+ L++ C + SS G VH Y + +GL + ++ LI+MY + GSL AR++
Sbjct: 471 PDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQARRI 530
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FD R + W+ A G GEE L L+++M +GI + T+ VL AC
Sbjct: 531 FDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACS----H 586
Query: 200 VYPLQKGKEIHANI-LRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWS 257
V +++G +++A + HG + ++D+ A+ G ++ A M + + V W
Sbjct: 587 VGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWK 646
Query: 258 AMI 260
++
Sbjct: 647 TLL 649
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/474 (33%), Positives = 247/474 (52%), Gaps = 6/474 (1%)
Query: 77 ERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCA 136
E + S ++ S A GR +H + +GL L+ L+ MY + SL+ A
Sbjct: 216 EGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEA 275
Query: 137 RKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVS 196
K+FD + +R W+A + G E ++L+ +M +GI +T VL AC
Sbjct: 276 CKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACS-- 333
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 256
+ L++GK++H+ +L+ G+E ++ T L+D+YAK GC++ A F + ++ W
Sbjct: 334 --DICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALW 391
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
+++I Y +N +AL L+ +M + IPN TM SV VHG
Sbjct: 392 TSLISGYVQNSDNEEALILYRRM--KTAGIIPNDPTMASVLKACSSLATLELGKQVHGHT 449
Query: 317 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 376
++ G +P+ +AL TMY +CG + G VF + N DVVSWN++IS +NG G +A+
Sbjct: 450 IKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEAL 509
Query: 377 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 436
++FE M+ +G+ P ++F+ ++ ACSH G VE G F M + + P ++HYACMVDL
Sbjct: 510 ELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDL 569
Query: 437 LGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNY 496
L RA +L EA + IE + G +W LL +C+ H EL A L L + Y
Sbjct: 570 LSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTY 629
Query: 497 VLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
V L+ IY DV+ V K M + K GCSWIE+K + + FV + +P
Sbjct: 630 VQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHP 683
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 186/394 (47%), Gaps = 9/394 (2%)
Query: 76 SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDC 135
+E NP T+ + +Q+ + GR VH ++ +G A L+N Y + G L
Sbjct: 8 TELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAK 67
Query: 136 ARKVFDETRERTIYIWNAFFRALAMVG---RGEELLELYRQMNWSGIPSDRFTYTYVLKA 192
A +F+ + + WN+ + G +++L+R+M I + +T + KA
Sbjct: 68 AHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKA 127
Query: 193 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN 252
E S+ G++ HA +++ +I+V T+L+ +Y K G + VF MP +N
Sbjct: 128 ----ESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERN 183
Query: 253 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV 312
+ +WS M+ YA +A+++F+ + E + + +V +
Sbjct: 184 TYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQI 243
Query: 313 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 372
H ++ GL + + NAL+TMY +C ++ ++FD + + ++W+++++ Y NG
Sbjct: 244 HCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGES 303
Query: 373 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 432
+A+++F M G+ PS + + VL ACS +EEGK L S L K +
Sbjct: 304 LEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL-HSFLLKLGFERHLFATTA 362
Query: 433 MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
+VD+ +A L +A K + + E +W SL+
Sbjct: 363 LVDMYAKAGCLADARKGFDCLQ-ERDVALWTSLI 395
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 6/193 (3%)
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG- 370
VHG I+R G + + N L+ Y +CG+++ +F+ + DVVSWNSLI+ Y NG
Sbjct: 36 VHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNGG 95
Query: 371 --YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 428
+Q+F M Q + P+ + + A S G+ +++ K +
Sbjct: 96 ISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQA-HALVVKMSSFGDIY 154
Query: 429 HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA-SAMLFE 487
+V + +A +++ +K+ MP E W +++ E A + + L E
Sbjct: 155 VDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYTWSTMVSGYATRGRVEEAIKVFNLFLRE 213
Query: 488 LEPWNAGNYVLLA 500
E + +YV A
Sbjct: 214 KEEGSDSDYVFTA 226
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 279 bits (714), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 166/487 (34%), Positives = 257/487 (52%), Gaps = 36/487 (7%)
Query: 64 GGNHKQALEVLWS----ERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYL 119
G H +ALEV + + T+ +++C++ GR H ++ G + + ++
Sbjct: 141 GKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFI 200
Query: 120 ATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMN-WSG 178
++ L +Y AR+VFDE E + W A A + EE L L+ M+ G
Sbjct: 201 SSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKG 260
Query: 179 IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCI 238
+ D T+ VL AC ++ L++GKEIH ++ +G N+ V ++LLD+Y K G +
Sbjct: 261 LVPDGSTFGTVLTAC----GNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSV 316
Query: 239 SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM----------VLEACDSIP 288
A VF M KNSVSWSA++G Y +N KA+E+F +M VL+AC +
Sbjct: 317 REARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLA 376
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
+HG +RRG + V +ALI +YG+ G I RV+
Sbjct: 377 ----------------AVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY 420
Query: 349 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
K+ ++++WN+++S NG G++A+ F +M+ +G+ P YISFI +L AC H G+V+
Sbjct: 421 SKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD 480
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
EG+ F M Y I PG EHY+CM+DLLGRA +EA L+E ++WG LLG
Sbjct: 481 EGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGP 540
Query: 469 CRIHCNA-ELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKV 527
C + +A +AER + + ELEP +YVLL+++Y D ++RKLM +R + K
Sbjct: 541 CAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKT 600
Query: 528 PGCSWIE 534
G SWI+
Sbjct: 601 VGQSWID 607
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 121/459 (26%), Positives = 207/459 (45%), Gaps = 44/459 (9%)
Query: 24 HVSSRLPVCFVSINPSANPVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVL----WSERN 79
H S +C S+ P K + I LC+ G +A+ +L SE
Sbjct: 9 HFSQHASLCLTPSISSSAPTKQSR----------ILELCKLGQLTEAIRILNSTHSSEIP 58
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG-SLDCARK 138
+ K L+Q+C + SF G H ++V SGL+ D + L+++Y +LG + R+
Sbjct: 59 ATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRR 118
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
VFD + W + + LE++ +M G+ ++ FT + +KAC SE
Sbjct: 119 VFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKAC--SEL 176
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
++ G+ H ++ HG+E N + +TL +Y A VF MP + + W+A
Sbjct: 177 G--EVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTA 234
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
++ ++KND+ +AL LF+ M +P+ T +V +HG ++
Sbjct: 235 VLSAFSKNDLYEEALGLFYAM-HRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLIT 293
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
G+ S + V ++L+ MYG+CG + +VF+ + + VSW++L+ Y NG +KAI+I
Sbjct: 294 NGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEI 353
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC------ 432
F M + + F TVL AC+ V GK IH C
Sbjct: 354 FREMEEKDL----YCFGTVLKACAGLAAVRLGK----------EIHGQYVRRGCFGNVIV 399
Query: 433 ---MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
++DL G++ +D A ++ M T W ++L +
Sbjct: 400 ESALIDLYGKSGCIDSASRVYSKMSIRNMIT-WNAMLSA 437
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 103/231 (44%), Gaps = 12/231 (5%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQD 116
L+ C+ G H++A+E+ ++++CA ++ G+++H V G +
Sbjct: 337 LLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGN 396
Query: 117 PYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW 176
+ + LI++Y + G +D A +V+ + R + WNA ALA GRGEE + + M
Sbjct: 397 VIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVK 456
Query: 177 SGIPSDRFTYTYVLKAC----VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
GI D ++ +L AC +V E Y + K +G + + ++D+
Sbjct: 457 KGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKS-------YGIKPGTEHYSCMIDLL 509
Query: 233 AKFGCISYANSVFRAMPAKNSVS-WSAMIGCYAKNDMPVKALELFHQMVLE 282
+ G A ++ +N S W ++G A N + E + ++E
Sbjct: 510 GRAGLFEEAENLLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMME 560
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 164/449 (36%), Positives = 240/449 (53%), Gaps = 23/449 (5%)
Query: 100 DGR-DVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAF---F 155
DGR D R L D +D +T +I G +D AR +FDE RER + W +
Sbjct: 154 DGRIDKARKLYDMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGY 213
Query: 156 RALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF-SVYPLQKGKEIHANIL 214
R V +L E+ + S YT + EF V P++ +A I+
Sbjct: 214 RQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIV 273
Query: 215 RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALE 274
G + G IS A VF M +++ +W MI Y + ++AL+
Sbjct: 274 GFG----------------EVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALD 317
Query: 275 LFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITM 334
LF QM + P+ +++S+ VH ++R D + V + L+TM
Sbjct: 318 LFAQMQKQGVR--PSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTM 375
Query: 335 YGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISF 394
Y +CGE+ + VFD+ + D++ WNS+IS Y ++G G++A++IF M G P+ ++
Sbjct: 376 YVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTL 435
Query: 395 ITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 454
I +L ACS+AG +EEG +FESM SK+ + P +EHY+C VD+LGRA ++D+A++LIE M
Sbjct: 436 IAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMT 495
Query: 455 FEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKS 514
+P TVWG+LLG+C+ H +LAE A+ LFE EP NAG YVLL+ I A W DV
Sbjct: 496 IKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAV 555
Query: 515 VRKLMGKRVLQKVPGCSWIEVKKKIYSFV 543
VRK M + K PGCSWIEV KK++ F
Sbjct: 556 VRKNMRTNNVSKFPGCSWIEVGKKVHMFT 584
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 113/232 (48%), Gaps = 14/232 (6%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I++ R G +AL++ + PS ++ ++ CA +S GR VH +LV
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
D D Y+A+ L+ MY + G L A+ VFD + I +WN+ A G GEE L+++
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANI-LRHGYEENIHVMTTLLDV 231
+M SG ++ T +L AC + L++G EI ++ + + + +D+
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAG----KLEEGLEIFESMESKFCVTPTVEHYSCTVDM 477
Query: 232 YAKFGCISYANSVFRAMPAK-NSVSWSAMIGC---YAKNDMP-VKALELFHQ 278
+ G + A + +M K ++ W A++G +++ D+ V A +LF
Sbjct: 478 LGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFEN 529
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/300 (21%), Positives = 120/300 (40%), Gaps = 69/300 (23%)
Query: 124 INMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMN------WS 177
I+ +G ++ ARK FD + + I WN+ G +E +L+ +M+ W+
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWN 83
Query: 178 GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC 237
G+ S Y+ +V +V+ L E N+ T ++ Y + G
Sbjct: 84 GLVSG-----YIKNRMIVEARNVFELMP-------------ERNVVSWTAMVKGYMQEGM 125
Query: 238 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 297
+ A S+F MP +N VSW+ M G + KA +L+ M ++ + N
Sbjct: 126 VGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTN-------- 177
Query: 298 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 357
+I R G + +FD+++ +VV
Sbjct: 178 ---------------------------------MIGGLCREGRVDEARLIFDEMRERNVV 204
Query: 358 SWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM 417
+W ++I+ Y N A ++FE M + + +S+ ++L + +G +E+ + FE M
Sbjct: 205 TWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFEVM 260
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 278 bits (711), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 165/504 (32%), Positives = 262/504 (51%), Gaps = 18/504 (3%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI G+ A+E R P T L++ + SD + VH G
Sbjct: 132 LISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLG 190
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYI-WNAFFRALAMVGRGEELLELY 171
D D Y+ + L+ Y + S++ A+KVFDE +R + WNA + + R E+ L ++
Sbjct: 191 FDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVF 250
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
+M G+ R T T VL A VS + G+ IH ++ G +I V L+D+
Sbjct: 251 SKMREEGVGVSRHTITSVLSAFTVSG----DIDNGRSIHGLAVKTGSGSDIVVSNALIDM 306
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNS 290
Y K + ANS+F AM ++ +W++++ + L LF +M+ C I P+
Sbjct: 307 YGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML---CSGIRPDI 363
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGL----DSIMPVINALITMYGRCGEISIGER 346
VT+ +V +HG+++ GL S + N+L+ MY +CG++
Sbjct: 364 VTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDARM 423
Query: 347 VFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGL 406
VFD ++ D SWN +I+ YG G+ A+ +F M GV P I+F+ +L ACSH+G
Sbjct: 424 VFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSGF 483
Query: 407 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
+ EG+ M + Y I P +HYAC++D+LGRA++L+EA +L P P VW S+L
Sbjct: 484 LNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSIL 543
Query: 467 GSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQK 526
SCR+H N +LA A L ELEP + G YVL++++Y EA + +V VR M ++ ++K
Sbjct: 544 SSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVKK 603
Query: 527 VPGCSWIEVKKKIYSFVSSEEDNP 550
PGCSWI +K +++F + + +P
Sbjct: 604 TPGCSWIVLKNGVHTFFTGNQTHP 627
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 169/350 (48%), Gaps = 16/350 (4%)
Query: 77 ERNP---SHKTIEVLI---QSCAQKSSFSDGRDVHRYLVDSG-LDQDPYLATKLINMYHE 129
E NP H + I Q CAQ+ + G+ +H ++V G LD P T L+NMY +
Sbjct: 49 EENPKRYEHHNVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAK 108
Query: 130 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 189
G + A VF + ER ++ +NA + G + +E YR+M +GI D++T+ +
Sbjct: 109 CGLMRRAVLVFGGS-ERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSL 167
Query: 190 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
LK E S K++H + G++ + +V + L+ Y+KF + A VF +P
Sbjct: 168 LKGSDAMELS-----DVKKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELP 222
Query: 250 AK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 308
+ +SV W+A++ Y++ AL +F +M E +++T SV
Sbjct: 223 DRDDSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSRHTIT--SVLSAFTVSGDIDN 280
Query: 309 XXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGN 368
+HG ++ G S + V NALI MYG+ + +F+ + D+ +WNS++ ++
Sbjct: 281 GRSIHGLAVKTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDY 340
Query: 369 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 418
G + +FE M+ G+ P ++ TVL C + +G+ + M+
Sbjct: 341 CGDHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMI 390
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 146/471 (30%), Positives = 258/471 (54%), Gaps = 6/471 (1%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P++ T + +++ +F + VH ++ + DP + L+ +Y +LG + A KV
Sbjct: 245 PNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKV 304
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F+E + + W+ G E ++L+ +M + + + FT + +L C + + S
Sbjct: 305 FNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCS 364
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
G+++H +++ G++ +I+V L+DVYAK + A +F + +KN VSW+ +
Sbjct: 365 GL----GEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTV 420
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I Y KA +F + + VT S VHG ++
Sbjct: 421 IVGYENLGEGGKAFSMFREALRNQVS--VTEVTFSSALGACASLASMDLGVQVHGLAIKT 478
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
+ V N+LI MY +CG+I + VF++++ DV SWN+LIS Y +G G++A++I
Sbjct: 479 NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL 538
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 439
+ M + P+ ++F+ VL CS+AGL+++G+ FESM+ + I P +EHY CMV LLGR
Sbjct: 539 DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGR 598
Query: 440 ANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLL 499
+ +LD+A+KLIE +P+EP +W ++L + N E A R++ + ++ P + YVL+
Sbjct: 599 SGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLV 658
Query: 500 ADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
+++YA AK W++V S+RK M + ++K PG SWIE + ++ F D+P
Sbjct: 659 SNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHP 709
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 148/307 (48%), Gaps = 6/307 (1%)
Query: 104 VHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGR 163
+H +V G D + ++ LIN Y GS+D AR VF+ + I +W G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 164 GEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIH 223
E+ L+L M +G + +T+ LKA + + KG +H IL+ Y +
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASI--GLGAFDFAKG--VHGQILKTCYVLDPR 283
Query: 224 VMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
V LL +Y + G +S A VF MP + V WS MI + +N +A++LF +M
Sbjct: 284 VGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRM--RE 341
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
+PN T+ S+ +HG +++ G D + V NALI +Y +C ++
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDT 401
Query: 344 GERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSH 403
++F ++ + + VSWN++I Y N G G KA +F + VS + ++F + L AC+
Sbjct: 402 AVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACAS 461
Query: 404 AGLVEEG 410
++ G
Sbjct: 462 LASMDLG 468
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 172/372 (46%), Gaps = 23/372 (6%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
+++ C QK+ + +H ++ G D + L+N Y + G A +FDE ER
Sbjct: 55 MLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPERN 114
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACV-VSEFSVYPLQKG 206
N F LA ++ + LY +++ G + +T LK V + + + P
Sbjct: 115 ----NVSFVTLAQGYACQDPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPW--- 167
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 266
+H+ I++ GY+ N V L++ Y+ G + A +VF + K+ V W+ ++ CY +N
Sbjct: 168 --LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN 225
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG--LDSI 324
+L+L M + +PN+ T + VHG IL+ LD
Sbjct: 226 GYFEDSLKLLSCMRMAG--FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPR 283
Query: 325 MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH 384
+ V L+ +Y + G++S +VF+++ DVV W+ +I+ + NG+ +A+ +F M
Sbjct: 284 VGV--GLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMRE 341
Query: 385 QGVSPSYISFITVLCACS---HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRAN 441
V P+ + ++L C+ +GL E+ ++ K + ++D+ +
Sbjct: 342 AFVVPNEFTLSSILNGCAIGKCSGLGEQ----LHGLVVKVGFDLDIYVSNALIDVYAKCE 397
Query: 442 RLDEAIKLIEDM 453
++D A+KL ++
Sbjct: 398 KMDTAVKLFAEL 409
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 22/282 (7%)
Query: 179 IPS-DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC 237
IP D Y +L+ C+ + K IH +IL+ G ++ LL+ Y K G
Sbjct: 44 IPGLDSHAYGAMLRRCIQKNDPI----SAKAIHCDILKKGSCLDLFATNILLNAYVKAGF 99
Query: 238 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 297
A ++F MP +N+VS+ + YA D P+ H+ E + P+ T S
Sbjct: 100 DKDALNLFDEMPERNNVSFVTLAQGYACQD-PIGLYSRLHR---EGHELNPHVFT--SFL 153
Query: 298 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 357
+H I++ G DS V ALI Y CG + VF+ + D+V
Sbjct: 154 KLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIV 213
Query: 358 SWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE-----EGKI 412
W ++S Y NGY + ++++ M G P+ +F T L A G + G+I
Sbjct: 214 VWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQI 273
Query: 413 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 454
L + R+ G ++ L + + +A K+ +MP
Sbjct: 274 LKTCYVLDPRVGVG------LLQLYTQLGDMSDAFKVFNEMP 309
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 84/191 (43%), Gaps = 6/191 (3%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG 131
E L ++ + + T + +CA +S G VH + + + ++ LI+MY + G
Sbjct: 439 EALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCG 498
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
+ A+ VF+E + WNA + G G + L + M + T+ VL
Sbjct: 499 DIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLS 558
Query: 192 ACVVSEFSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 250
C + + +G+E +++R HG E + T ++ + + G + A + +P
Sbjct: 559 GCSNAGL----IDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIEGIPY 614
Query: 251 KNSVS-WSAMI 260
+ SV W AM+
Sbjct: 615 EPSVMIWRAML 625
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 160/504 (31%), Positives = 261/504 (51%), Gaps = 44/504 (8%)
Query: 78 RNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCAR 137
R KT+ +++SC + +H ++ + DQD ++ +LI + L S+D A
Sbjct: 25 RLSRRKTLISVLRSCKNIAHVPS---IHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAY 81
Query: 138 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
VF +Y++ A GR + + LY +M + + D + T VLKAC
Sbjct: 82 DVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC---- 137
Query: 198 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
L+ +EIHA +L+ G+ + V ++++Y K G + A +F MP ++ V+ +
Sbjct: 138 ----DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAAT 193
Query: 258 AMIGCYA-------------------------------KNDMPVKALELFHQMVLEACDS 286
MI CY+ +N KALELF +M +E +
Sbjct: 194 VMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSA 253
Query: 287 IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGER 346
N T V V VH F+ + ++ V NALI MY RCG+I+ R
Sbjct: 254 --NEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARR 311
Query: 347 VFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGL 406
VF +++ DV+S+N++IS +G +AI F +M+++G P+ ++ + +L ACSH GL
Sbjct: 312 VFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGL 371
Query: 407 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
++ G +F SM + + P +EHY C+VDLLGR RL+EA + IE++P EP + G+LL
Sbjct: 372 LDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLL 431
Query: 467 GSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQK 526
+C+IH N EL E+ + LFE E ++G YVLL+++YA + W + +R+ M ++K
Sbjct: 432 SACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEK 491
Query: 527 VPGCSWIEVKKKIYSFVSSEEDNP 550
PGCS IEV +I+ F+ + +P
Sbjct: 492 EPGCSTIEVDNQIHEFLVGDIAHP 515
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 158/477 (33%), Positives = 250/477 (52%), Gaps = 39/477 (8%)
Query: 106 RYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRER-TIYIWNAFFRALAMVGRG 164
R + D L++D T ++ Y + G D ++ + + + +NA G
Sbjct: 208 RKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFY 267
Query: 165 EELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHV 224
+E LE+ R+M SGI D FTY V++AC + LQ GK++HA +LR + + H
Sbjct: 268 QEALEMVRRMVSSGIELDEFTYPSVIRACATAGL----LQLGKQVHAYVLRR-EDFSFHF 322
Query: 225 MTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY--------------------- 263
+L+ +Y K G A ++F MPAK+ VSW+A++ Y
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 264 ----------AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 313
A+N + L+LF M E + P H
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFE--PCDYAFSGAIKSCAVLGAYCNGQQYH 440
Query: 314 GFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 373
+L+ G DS + NALITMY +CG + +VF + D VSWN+LI+ G +G+G
Sbjct: 441 AQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGA 500
Query: 374 KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACM 433
+A+ ++E M+ +G+ P I+ +TVL ACSHAGLV++G+ F+SM + YRI PG +HYA +
Sbjct: 501 EAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARL 560
Query: 434 VDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNA 493
+DLL R+ + +A +IE +PF+P +W +LL CR+H N EL A+ LF L P +
Sbjct: 561 IDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD 620
Query: 494 GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
G Y+LL++++A W +V VRKLM R ++K CSWIE++ ++++F+ + +P
Sbjct: 621 GTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHP 677
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 158/392 (40%), Gaps = 77/392 (19%)
Query: 94 QKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRE-------- 145
+++S R VH ++ G ++ +LI++Y + L+ AR++FDE E
Sbjct: 26 RRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTT 85
Query: 146 -------------------------RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP 180
R ++NA + G + L+ +M G
Sbjct: 86 MVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFK 145
Query: 181 SDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC-- 237
D FT+ VL +V++ +Q HA L+ G V L+ VY+K
Sbjct: 146 PDNFTFASVLAGLALVADDEKQCVQ----FHAAALKSGAGYITSVSNALVSVYSKCASSP 201
Query: 238 --ISYANSVFRAMPAKNSVSWSAMIGCYAKN---DMPVKALE------------------ 274
+ A VF + K+ SW+ M+ Y KN D+ + LE
Sbjct: 202 SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGY 261
Query: 275 ---LFHQMVLEACDSIPNS------VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 325
F+Q LE + +S T SV VH ++LRR D
Sbjct: 262 VNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSF 320
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
N+L+++Y +CG+ +F+K+ D+VSWN+L+S Y ++G+ +A IF+ M +
Sbjct: 321 HFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 386 GVSPSYISFITVLCACSHAGLVEEGKILFESM 417
+ +S++ ++ + G EEG LF M
Sbjct: 381 NI----LSWMIMISGLAENGFGEEGLKLFSCM 408
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 100/245 (40%), Gaps = 33/245 (13%)
Query: 44 KDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWSER----NPSHKTIEVLIQSCAQKSSFS 99
K++K +I L G ++ L++ + P I+SCA ++
Sbjct: 375 KEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYC 434
Query: 100 DGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALA 159
+G+ H L+ G D LI MY + G ++ AR+VF WNA AL
Sbjct: 435 NGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALG 494
Query: 160 MVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG-- 217
G G E +++Y +M GI DR T VL AC HA ++ G
Sbjct: 495 QHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACS---------------HAGLVDQGRK 539
Query: 218 YEENIHVM----------TTLLDVYAKFGCISYANSVFRAMPAKNSVS-WSAMI-GCYAK 265
Y +++ + L+D+ + G S A SV ++P K + W A++ GC
Sbjct: 540 YFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVH 599
Query: 266 NDMPV 270
+M +
Sbjct: 600 GNMEL 604
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 275 bits (704), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 153/486 (31%), Positives = 254/486 (52%), Gaps = 13/486 (2%)
Query: 63 RGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPY 118
RG N + L +++ + P T + I++C G V VD G D +
Sbjct: 93 RGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVF 152
Query: 119 LATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG 178
+ + ++N+Y + G +D A +F + +R + W A G+ + +E YR+M G
Sbjct: 153 VCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEG 212
Query: 179 IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCI 238
DR +L+A + + G+ +H + R G N+ V T+L+D+YAK G I
Sbjct: 213 FGRDRVVMLGLLQA----SGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFI 268
Query: 239 SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXX 298
A+ VF M K +VSW ++I +A+N + KA E +M ++ P+ VT+V V
Sbjct: 269 EVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEM--QSLGFQPDLVTLVGVLV 326
Query: 299 XXXXXXXXXXXXXVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 357
VH +IL+R LD + AL+ MY +CG +S +F+ V D+V
Sbjct: 327 ACSQVGSLKTGRLVHCYILKRHVLDRVTA--TALMDMYSKCGALSSSREIFEHVGRKDLV 384
Query: 358 SWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM 417
WN++IS YG +G G++ + +F M + P + +F ++L A SH+GLVE+G+ F M
Sbjct: 385 CWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVM 444
Query: 418 LSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAEL 477
++KY+I P +HY C++DLL RA R++EA+ +I + +W +LL C H N +
Sbjct: 445 INKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALLSGCINHRNLSV 504
Query: 478 AERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKK 537
+ A+ + +L P + G L+++ +A A W +V VRKLM ++KVPG S IEV
Sbjct: 505 GDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNG 564
Query: 538 KIYSFV 543
++ +F+
Sbjct: 565 ELRTFL 570
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 179/374 (47%), Gaps = 10/374 (2%)
Query: 104 VHRYLVDSG-LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVG 162
+H +++ +G L ++ LI +G + ARKVFDE +R + ++N+ +
Sbjct: 36 IHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVVYSRGK 95
Query: 163 RGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENI 222
+E+L LY QM I D T+T +KAC+ S L+KG+ + + GY+ ++
Sbjct: 96 NPDEVLRLYDQMIAEKIQPDSSTFTMTIKACL----SGLVLEKGEAVWCKAVDFGYKNDV 151
Query: 223 HVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLE 282
V +++L++Y K G + A +F M ++ + W+ M+ +A+ +KA+E + +M E
Sbjct: 152 FVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 283 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 342
+ V M+ + VHG++ R GL + V +L+ MY + G I
Sbjct: 212 GFGR--DRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIE 269
Query: 343 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
+ RVF ++ VSW SLIS + NG KA + M G P ++ + VL ACS
Sbjct: 270 VASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACS 329
Query: 403 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVW 462
G ++ G+++ +L ++ + ++D+ + L + ++ E + W
Sbjct: 330 QVGSLKTGRLVHCYILKRHVLDRVTA--TALMDMYSKCGALSSSREIFEHVG-RKDLVCW 386
Query: 463 GSLLGSCRIHCNAE 476
+++ IH N +
Sbjct: 387 NTMISCYGIHGNGQ 400
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 156/487 (32%), Positives = 262/487 (53%), Gaps = 28/487 (5%)
Query: 82 HKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDP---YLATKLINMYHELGSLDCARK 138
H+ I L ++C+ S + +H + + + ++P +L K++ + ++ A +
Sbjct: 48 HQRIFSLAETCSDMSQL---KQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFR 104
Query: 139 VFDETRERTIYIWNAFFRALAM-VGRGEELLELYRQMNWSGIPS-DRFTYTYVLKACVVS 196
VFD + ++WN RA A V R EE LYR+M G S D+ T+ +VLKAC
Sbjct: 105 VFDSIENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAY- 163
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 256
++ +GK++H I++HG+ +++V L+ +Y GC+ A VF MP ++ VSW
Sbjct: 164 ---IFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSW 220
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
++MI + AL+LF +M P+ TM SV H F+
Sbjct: 221 NSMIDALVRFGEYDSALQLFREMQRSF---EPDGYTMQSVLSACAGLGSLSLGTWAHAFL 277
Query: 317 LRR-GLDSIMPVI--NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 373
LR+ +D M V+ N+LI MY +CG + + E+VF ++ D+ SWN++I + +G +
Sbjct: 278 LRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAE 337
Query: 374 KAIQIFENMI--HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
+A+ F+ M+ + V P+ ++F+ +L AC+H G V +G+ F+ M+ Y I P +EHY
Sbjct: 338 EAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYG 397
Query: 432 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS-CRIHCNAELAERASAMLFELEP 490
C+VDL+ RA + EAI ++ MP +P +W SLL + C+ + EL+E + + +
Sbjct: 398 CIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKE 457
Query: 491 WN-------AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFV 543
N +G YVLL+ +YA A W+DV VRKLM + ++K PGCS IE+ + F
Sbjct: 458 DNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFF 517
Query: 544 SSEEDNP 550
+ + +P
Sbjct: 518 AGDTSHP 524
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 139/292 (47%), Gaps = 10/292 (3%)
Query: 77 ERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCA 136
E +P T ++++CA FS+G+ VH +V G D Y+ LI++Y G LD A
Sbjct: 146 ESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLA 205
Query: 137 RKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVS 196
RKVFDE ER++ WN+ AL G + L+L+R+M S P D +T VL AC
Sbjct: 206 RKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEP-DGYTMQSVLSACA-- 262
Query: 197 EFSVYPLQKGKEIHANILRH---GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS 253
+ L G HA +LR ++ V +L+++Y K G + A VF+ M ++
Sbjct: 263 --GLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDL 320
Query: 254 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 313
SW+AMI +A + +A+ F +MV + + PNSVT V +
Sbjct: 321 ASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYF 380
Query: 314 GFILRR-GLDSIMPVINALITMYGRCGEISIG-ERVFDKVKNPDVVSWNSLI 363
++R ++ + ++ + R G I+ + V PD V W SL+
Sbjct: 381 DMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLL 432
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 275 bits (703), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 170/537 (31%), Positives = 260/537 (48%), Gaps = 72/537 (13%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T+ ++ S A G+ VH ++V GL + ++ L+NMY + G A+ V
Sbjct: 144 PTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFV 203
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSGIPS------------ 181
FD R I WNA VG+ + + + QM W+ + S
Sbjct: 204 FDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRAL 263
Query: 182 --------------DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN------ 221
DRFT VL AC E L GK+IH++I+ G++ +
Sbjct: 264 DIFSKMLRDSLLSPDRFTLASVLSACANLE----KLCIGKQIHSHIVTTGFDISGIVLNA 319
Query: 222 ---------------------------IHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 254
I T LLD Y K G ++ A ++F ++ ++ V
Sbjct: 320 LISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVV 379
Query: 255 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 314
+W+AMI Y ++ +A+ LF MV PNS T+ ++ +HG
Sbjct: 380 AWTAMIVGYEQHGSYGEAINLFRSMV--GGGQRPNSYTLAAMLSVASSLASLSHGKQIHG 437
Query: 315 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLISMYGNNGYGK 373
++ G + V NALITMY + G I+ R FD ++ D VSW S+I +G+ +
Sbjct: 438 SAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAE 497
Query: 374 KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACM 433
+A+++FE M+ +G+ P +I+++ V AC+HAGLV +G+ F+ M +I P + HYACM
Sbjct: 498 EALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACM 557
Query: 434 VDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNA 493
VDL GRA L EA + IE MP EP WGSLL +CR+H N +L + A+ L LEP N+
Sbjct: 558 VDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENS 617
Query: 494 GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
G Y LA++Y+ W + +RK M ++K G SWIEVK K++ F + +P
Sbjct: 618 GAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHP 674
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 122/516 (23%), Positives = 210/516 (40%), Gaps = 111/516 (21%)
Query: 80 PSHKTIEVLIQSCA---QKS-SFSDGRD----VHRYLVDSGLDQDPYLATKLINMYHELG 131
P ++ L++ C QKS + S+GR VH ++ SGL YL L+N+Y + G
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTG 63
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWS-------- 177
ARK+FDE RT + WN A + G + E + Q+ +W+
Sbjct: 64 YALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKN 123
Query: 178 -----------------GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 220
GI +FT T VL + + ++ GK++H+ I++ G
Sbjct: 124 IGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATR----CMETGKKVHSFIVKLGLRG 179
Query: 221 NIHVMTTLLDVYAK-------------------------------FGCISYANSVFRAMP 249
N+ V +LL++YAK G + A + F M
Sbjct: 180 NVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMA 239
Query: 250 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 309
++ V+W++MI + + ++AL++F +M+ ++ S P+ T+ SV
Sbjct: 240 ERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLS-PDRFTLASVLSACANLEKLCIG 298
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGER----------------------- 346
+H I+ G D V+NALI+MY RCG + R
Sbjct: 299 KQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYI 358
Query: 347 ----------VFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFIT 396
+F +K+ DVV+W ++I Y +G +AI +F +M+ G P+ +
Sbjct: 359 KLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAA 418
Query: 397 VLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE 456
+L S + GK + S + I+ + ++ + +A + A + + + E
Sbjct: 419 MLSVASSLASLSHGKQIHGSAVKSGEIYS-VSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 457 PGPTVWGSLLGSCRIHCNAELA-ERASAMLFE-LEP 490
W S++ + H +AE A E ML E L P
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRP 513
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 165/380 (43%), Gaps = 53/380 (13%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
+P T+ ++ +CA G+ +H ++V +G D + LI+MY G ++ AR+
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 139 ---------------------------------VFDETRERTIYIWNAFFRALAMVGRGE 165
+F ++R + W A G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 166 ELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVM 225
E + L+R M G + +Y L A + S+ L GK+IH + ++ G ++ V
Sbjct: 396 EAINLFRSMVGGGQRPN----SYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 226 TTLLDVYAKFGCISYANSVFRAMPA-KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
L+ +YAK G I+ A+ F + +++VSW++MI A++ +ALELF M++E
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN---ALITMYGRCGEI 341
P+ +T V V F + + +D I+P ++ ++ ++GR G +
Sbjct: 512 R--PDHITYVGVFSACTHAGLVNQGRQY--FDMMKDVDKIIPTLSHYACMVDLFGRAGLL 567
Query: 342 SIGERVFDKVK-NPDVVSWNSLIS---MYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
+ +K+ PDVV+W SL+S ++ N GK A + ++ S +Y + +
Sbjct: 568 QEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLL-LLEPENSGAYSALANL 626
Query: 398 LCACSHAGLVEEGKILFESM 417
AC G EE + +SM
Sbjct: 627 YSAC---GKWEEAAKIRKSM 643
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 102/243 (41%), Gaps = 33/243 (13%)
Query: 36 INPSANPVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWS----ERNPSHKTIEVLIQS 91
+N + N +K +I + G++ +A+ + S + P+ T+ ++
Sbjct: 363 MNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSV 422
Query: 92 CAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETR-ERTIYI 150
+ +S S G+ +H V SG ++ LI MY + G++ A + FD R ER
Sbjct: 423 ASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVS 482
Query: 151 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 210
W + ALA G EE LEL+ M G+ D TY V AC H
Sbjct: 483 WTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT---------------H 527
Query: 211 ANILRHGYE------ENIHVMTTL------LDVYAKFGCISYANSVFRAMPAK-NSVSWS 257
A ++ G + + ++ TL +D++ + G + A MP + + V+W
Sbjct: 528 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 587
Query: 258 AMI 260
+++
Sbjct: 588 SLL 590
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 155/506 (30%), Positives = 263/506 (51%), Gaps = 38/506 (7%)
Query: 77 ERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCA 136
E P+ T+ +I +CA+ G V+ ++ +SG++ + + + L++MY + ++D A
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 137 RKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVS 196
+++FDE + + NA G E L ++ M SG+ DR + + +C
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS-- 348
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF--------------------- 235
+ + GK H +LR+G+E ++ L+D+Y K
Sbjct: 349 --QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 236 ----------GCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 285
G + A F MP KN VSW+ +I + + +A+E+F M ++ +
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM--QSQE 464
Query: 286 SI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 344
+ + VTM+S+ ++ +I + G+ + + L+ M+ RCG+
Sbjct: 465 GVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Query: 345 ERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA 404
+F+ + N DV +W + I G ++AI++F++MI QG+ P ++F+ L ACSH
Sbjct: 525 MSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHG 584
Query: 405 GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGS 464
GLV++GK +F SML + + P HY CMVDLLGRA L+EA++LIEDMP EP +W S
Sbjct: 585 GLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNS 644
Query: 465 LLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVL 524
LL +CR+ N E+A A+ + L P G+YVLL+++YA A W+D+ VR M ++ L
Sbjct: 645 LLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGL 704
Query: 525 QKVPGCSWIEVKKKIYSFVSSEEDNP 550
+K PG S I+++ K + F S +E +P
Sbjct: 705 RKPPGTSSIQIRGKTHEFTSGDESHP 730
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 186/371 (50%), Gaps = 19/371 (5%)
Query: 105 HRYLVDSGLDQDPYLATKLINMYHELG---SLDCARKVFDETRE-RTIYIWNAFFRALAM 160
HR L GLD D TKL+ ELG SL A++VF+ + T +++N+ R A
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 220
G E + L+ +M SGI D++T+ + L AC S G +IH I++ GY +
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSR----AKGNGIQIHGLIVKMGYAK 167
Query: 221 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
++ V +L+ YA+ G + A VF M +N VSW++MI YA+ D A++LF +MV
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 281 LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGE 340
+ + PNSVTMV V V+ FI G++ +++AL+ MY +C
Sbjct: 228 RDE-EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 341 ISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
I + +R+FD+ ++ N++ S Y G ++A+ +F M+ GV P IS ++ + +
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYA----CMVDLLGRANRLDEAIKLIEDMPFE 456
CS IL+ Y + G E + ++D+ + +R D A ++ + M +
Sbjct: 347 CSQL-----RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 457 PGPTVWGSLLG 467
T W S++
Sbjct: 402 TVVT-WNSIVA 411
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 170/351 (48%), Gaps = 11/351 (3%)
Query: 71 LEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL 130
L ++ S +P T + +CA+ + +G +H +V G +D ++ L++ Y E
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
G LD ARKVFDE ER + W + A ++ ++L+ +M + + T V
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM----VRDEEVTPNSVT 238
Query: 191 KACVVSEFS-VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
CV+S + + L+ G++++A I G E N +++ L+D+Y K I A +F
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 250 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 309
A N +AM Y + + +AL +F+ M+ P+ ++M+S
Sbjct: 299 ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR--PDRISMLSAISSCSQLRNILWG 356
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 369
HG++LR G +S + NALI MY +C R+FD++ N VV+WNS+++ Y N
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 370 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 420
G A + FE M + + +S+ T++ L EE +F SM S+
Sbjct: 417 GEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQ 463
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 14/225 (6%)
Query: 57 LIQSLCRGGNHKQALEVLWSER-----NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
+I L +G ++A+EV S + N T+ + +C + + ++ Y+ +
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
G+ D L T L++M+ G + A +F+ R + W A A+AM G E +EL+
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR-HGYE-ENIHVMTTLL 229
M G+ D + L AC +Q+GKEI ++L+ HG E++H ++
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGL----VQQGKEIFYSMLKLHGVSPEDVHY-GCMV 614
Query: 230 DVYAKFGCISYANSVFRAMPAK-NSVSWSAMI-GCYAKNDMPVKA 272
D+ + G + A + MP + N V W++++ C + ++ + A
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 275 bits (702), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 155/506 (30%), Positives = 263/506 (51%), Gaps = 38/506 (7%)
Query: 77 ERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCA 136
E P+ T+ +I +CA+ G V+ ++ +SG++ + + + L++MY + ++D A
Sbjct: 231 EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVA 290
Query: 137 RKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVS 196
+++FDE + + NA G E L ++ M SG+ DR + + +C
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCS-- 348
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF--------------------- 235
+ + GK H +LR+G+E ++ L+D+Y K
Sbjct: 349 --QLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 236 ----------GCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 285
G + A F MP KN VSW+ +I + + +A+E+F M ++ +
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSM--QSQE 464
Query: 286 SI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 344
+ + VTM+S+ ++ +I + G+ + + L+ M+ RCG+
Sbjct: 465 GVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESA 524
Query: 345 ERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA 404
+F+ + N DV +W + I G ++AI++F++MI QG+ P ++F+ L ACSH
Sbjct: 525 MSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHG 584
Query: 405 GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGS 464
GLV++GK +F SML + + P HY CMVDLLGRA L+EA++LIEDMP EP +W S
Sbjct: 585 GLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNS 644
Query: 465 LLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVL 524
LL +CR+ N E+A A+ + L P G+YVLL+++YA A W+D+ VR M ++ L
Sbjct: 645 LLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGL 704
Query: 525 QKVPGCSWIEVKKKIYSFVSSEEDNP 550
+K PG S I+++ K + F S +E +P
Sbjct: 705 RKPPGTSSIQIRGKTHEFTSGDESHP 730
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/371 (30%), Positives = 186/371 (50%), Gaps = 19/371 (5%)
Query: 105 HRYLVDSGLDQDPYLATKLINMYHELG---SLDCARKVFDETRE-RTIYIWNAFFRALAM 160
HR L GLD D TKL+ ELG SL A++VF+ + T +++N+ R A
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 220
G E + L+ +M SGI D++T+ + L AC S G +IH I++ GY +
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAK----GNGIQIHGLIVKMGYAK 167
Query: 221 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
++ V +L+ YA+ G + A VF M +N VSW++MI YA+ D A++LF +MV
Sbjct: 168 DLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227
Query: 281 LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGE 340
+ + PNSVTMV V V+ FI G++ +++AL+ MY +C
Sbjct: 228 RDE-EVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 341 ISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
I + +R+FD+ ++ N++ S Y G ++A+ +F M+ GV P IS ++ + +
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYA----CMVDLLGRANRLDEAIKLIEDMPFE 456
CS IL+ Y + G E + ++D+ + +R D A ++ + M +
Sbjct: 347 CSQL-----RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK 401
Query: 457 PGPTVWGSLLG 467
T W S++
Sbjct: 402 TVVT-WNSIVA 411
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 172/355 (48%), Gaps = 11/355 (3%)
Query: 71 LEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL 130
L ++ S +P T + +CA+ + +G +H +V G +D ++ L++ Y E
Sbjct: 123 LRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAEC 182
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
G LD ARKVFDE ER + W + A ++ ++L+ +M + + T V
Sbjct: 183 GELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM----VRDEEVTPNSVT 238
Query: 191 KACVVSEFS-VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
CV+S + + L+ G++++A I G E N +++ L+D+Y K I A +F
Sbjct: 239 MVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYG 298
Query: 250 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 309
A N +AM Y + + +AL +F+ M+ P+ ++M+S
Sbjct: 299 ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVR--PDRISMLSAISSCSQLRNILWG 356
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 369
HG++LR G +S + NALI MY +C R+FD++ N VV+WNS+++ Y N
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 370 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 424
G A + FE M + + +S+ T++ L EE +F SM S+ ++
Sbjct: 417 GEVDAAWETFETMPEKNI----VSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVN 467
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 106/225 (47%), Gaps = 14/225 (6%)
Query: 57 LIQSLCRGGNHKQALEVLWSER-----NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
+I L +G ++A+EV S + N T+ + +C + + ++ Y+ +
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
G+ D L T L++M+ G + A +F+ R + W A A+AM G E +EL+
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR-HGYE-ENIHVMTTLL 229
M G+ D + L AC +Q+GKEI ++L+ HG E++H ++
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGL----VQQGKEIFYSMLKLHGVSPEDVHY-GCMV 614
Query: 230 DVYAKFGCISYANSVFRAMPAK-NSVSWSAMI-GCYAKNDMPVKA 272
D+ + G + A + MP + N V W++++ C + ++ + A
Sbjct: 615 DLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAA 659
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 154/463 (33%), Positives = 256/463 (55%), Gaps = 13/463 (2%)
Query: 87 VLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL---GSLDCARKVFDET 143
+LI C +S + + Y + S ++ ++A KLIN E S+ AR +F+
Sbjct: 34 LLISKC---NSLRELMQIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMSYARHLFEAM 89
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
E I I+N+ R + E+ L+ ++ GI D +T+ +LKAC V++ L
Sbjct: 90 SEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAK----AL 145
Query: 204 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 263
++G+++H ++ G ++N++V TL+++Y + + A VF + V ++AMI Y
Sbjct: 146 EEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGY 205
Query: 264 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 323
A+ + P +AL LF +M + PN +T++SV +H + +
Sbjct: 206 ARRNRPNEALSLFREMQGKYLK--PNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCK 263
Query: 324 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI 383
+ V ALI M+ +CG + +F+K++ D +W+++I Y N+G +K++ +FE M
Sbjct: 264 YVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMR 323
Query: 384 HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 443
+ V P I+F+ +L ACSH G VEEG+ F M+SK+ I P ++HY MVDLL RA L
Sbjct: 324 SENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNL 383
Query: 444 DEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIY 503
++A + I+ +P P P +W LL +C H N +LAE+ S +FEL+ + G+YV+L+++Y
Sbjct: 384 EDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLY 443
Query: 504 AEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 546
A K W V S+RK+M R KVPGCS IEV ++ F S +
Sbjct: 444 ARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGD 486
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 114/226 (50%), Gaps = 6/226 (2%)
Query: 71 LEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL 130
+E+L P + T L+++CA + +GR +H + GLD + Y+ LINMY E
Sbjct: 118 VEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTEC 177
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
+D AR VFD E + +NA A R E L L+R+M + + T VL
Sbjct: 178 EDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVL 237
Query: 191 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 250
+C + + L GK IH +H + + + V T L+D++AK G + A S+F M
Sbjct: 238 SSCAL----LGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRY 293
Query: 251 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 296
K++ +WSAMI YA + K++ +F +M E P+ +T + +
Sbjct: 294 KDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQ--PDEITFLGL 337
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 275 bits (702), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 152/485 (31%), Positives = 253/485 (52%), Gaps = 13/485 (2%)
Query: 71 LEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL 130
L+++ S T+ + +CA+ + S G+ +H + + SGL D + L++MY +
Sbjct: 258 LDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKC 315
Query: 131 ---GSLDCARKVFDETRERTIYIWNAFFRA-LAMVGRGEELLELYRQMNWSG-IPSDRFT 185
GS+D RKVFD + ++ W A + E + L+ +M G + + FT
Sbjct: 316 SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFT 375
Query: 186 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 245
++ KAC ++ + GK++ + G N V +++ ++ K + A F
Sbjct: 376 FSSAFKACG----NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAF 431
Query: 246 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 305
++ KN VS++ + +N +A +L ++ ++ T S+
Sbjct: 432 ESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELG--VSAFTFASLLSGVANVGS 489
Query: 306 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 365
+H +++ GL PV NALI+MY +CG I RVF+ ++N +V+SW S+I+
Sbjct: 490 IRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITG 549
Query: 366 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 425
+ +G+ + ++ F MI +GV P+ ++++ +L ACSH GLV EG F SM ++I P
Sbjct: 550 FAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKP 609
Query: 426 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 485
MEHYACMVDLL RA L +A + I MPF+ VW + LG+CR+H N EL + A+ +
Sbjct: 610 KMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKI 669
Query: 486 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSS 545
EL+P Y+ L++IYA A W + +R+ M +R L K GCSWIEV KI+ F
Sbjct: 670 LELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVG 729
Query: 546 EEDNP 550
+ +P
Sbjct: 730 DTAHP 734
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 191/399 (47%), Gaps = 23/399 (5%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T L++SC + F G+ VH L++ ++ D L LI++Y + G A VF+
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 144 R---ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSV 200
R +R + W+A GR + ++++ + G+ + + YT V++AC S+F
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDF-- 181
Query: 201 YPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYANS--VFRAMPAKNSVSWS 257
+ G+ +++ G +E ++ V +L+D++ K G S+ N+ VF M N V+W+
Sbjct: 182 --VGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWT 238
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
MI + P +A+ F MVL +S + T+ SV +H + +
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFES--DKFTLSSVFSACAELENLSLGKQLHSWAI 296
Query: 318 RRGLDSIMPVINALITMYGRC---GEISIGERVFDKVKNPDVVSWNSLISMYGNN-GYGK 373
R GL + V +L+ MY +C G + +VFD++++ V+SW +LI+ Y N
Sbjct: 297 RSGL--VDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLAT 354
Query: 374 KAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 432
+AI +F MI QG V P++ +F + AC + GK + K +
Sbjct: 355 EAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF-KRGLASNSSVANS 413
Query: 433 MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL-GSCR 470
++ + +++R+++A + E + E + + L G+CR
Sbjct: 414 VISMFVKSDRMEDAQRAFESLS-EKNLVSYNTFLDGTCR 451
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 157/338 (46%), Gaps = 13/338 (3%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG-LDQDPYLATKLINMYHE-LGSLDCAR 137
P+ +I++C+ GR +L+ +G + D + LI+M+ + S + A
Sbjct: 164 PNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAY 223
Query: 138 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
KVFD+ E + W +G E + + M SG SD+FT + V AC E
Sbjct: 224 KVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELE 283
Query: 198 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF---GCISYANSVFRAMPAKNSV 254
L GK++H+ +R G +++ +L+D+YAK G + VF M + +
Sbjct: 284 ----NLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVM 337
Query: 255 SWSAMIGCYAKN-DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 313
SW+A+I Y KN ++ +A+ LF +M+ + PN T S V
Sbjct: 338 SWTALITGYMKNCNLATEAINLFSEMITQG-HVEPNHFTFSSAFKACGNLSDPRVGKQVL 396
Query: 314 GFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 373
G +RGL S V N++I+M+ + + +R F+ + ++VS+N+ + N +
Sbjct: 397 GQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFE 456
Query: 374 KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
+A ++ + + + S +F ++L ++ G + +G+
Sbjct: 457 QAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGE 494
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 10/211 (4%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+ CR N +QA E+ E S T L+ A S G +H +V G
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
L + + LI+MY + GS+D A +VF+ R + W + A G +LE +
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG-KEIHANILRHGYEENIHVMTTLLDV 231
QM G+ + TY +L AC V + +G + ++ H + + ++D+
Sbjct: 565 QMIEEGVKPNEVTYVAILSACS----HVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDL 620
Query: 232 YAKFGCISYANSVFRAMPAKNSV-SWSAMIG 261
+ G ++ A MP + V W +G
Sbjct: 621 LCRAGLLTDAFEFINTMPFQADVLVWRTFLG 651
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 87/185 (47%), Gaps = 5/185 (2%)
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
+SVT S+ VH ++ ++ + N+LI++Y + G+ + E VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 349 DKVK---NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 405
+ ++ DVVSW+++++ YGNNG AI++F + G+ P+ + V+ ACS++
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 406 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRA-NRLDEAIKLIEDMPFEPGPTVWGS 464
V G++ ++ + ++D+ + N + A K+ + M E W
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVVTWTL 239
Query: 465 LLGSC 469
++ C
Sbjct: 240 MITRC 244
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 153/495 (30%), Positives = 262/495 (52%), Gaps = 38/495 (7%)
Query: 89 IQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTI 148
+Q CA+ + + + +H ++V G+ Q LA L+N+Y + G+ A +VFDE R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 149 YIWNAFFRALAMVG-RGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
W + AL G+ L + SG+ D F ++ ++KAC ++ + G+
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACA----NLGSIDHGR 125
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
++H + + Y + V ++L+D+YAK G ++ A +VF ++ KN++SW+AM+ YAK+
Sbjct: 126 QVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSG 185
Query: 268 MPVKALELFH-------------------------------QMVLEACDSIPNSVTMVSV 296
+ALELF +M E D I + + + S+
Sbjct: 186 RKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVD-ILDPLVLSSI 244
Query: 297 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV 356
VHG ++ G DS + + NALI MY +C ++ + +F ++++ DV
Sbjct: 245 VGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDV 304
Query: 357 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFES 416
VSW SLI +G +KA+ ++++M+ GV P+ ++F+ ++ ACSH G VE+G+ LF+S
Sbjct: 305 VSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQS 364
Query: 417 MLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAE 476
M Y I P ++HY C++DLLGR+ LDEA LI MPF P W +LL +C+ +
Sbjct: 365 MTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQ 424
Query: 477 LAER-ASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV 535
+ R A ++ + + Y+LL++IYA A +W V R+ +G+ ++K PG S +EV
Sbjct: 425 MGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEV 484
Query: 536 KKKIYSFVSSEEDNP 550
+K+ F + E +P
Sbjct: 485 RKETEVFYAGETSHP 499
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 160/384 (41%), Gaps = 45/384 (11%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P L+++CA S GR VH + + S D + + L++MY + G L+ A+ V
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSGIPS------------ 181
FD R + W A A GR EE LEL+R + +W+ + S
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222
Query: 182 --------------DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
D + ++ AC S+ G+++H ++ G++ + +
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIVGACANLAASI----AGRQVHGLVIALGFDSCVFISNA 278
Query: 228 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 287
L+D+YAK + A +F M ++ VSW+++I A++ KAL L+ MV
Sbjct: 279 LIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVK-- 336
Query: 288 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIGER 346
PN VT V + + + + G+ + L+ + GR G + E
Sbjct: 337 PNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAEN 396
Query: 347 VFDKVK-NPDVVSWNSLISMYGNNGYGKKAIQIFENMIH--QGVSPS-YISFITVLCACS 402
+ + PD +W +L+S G G+ I+I ++++ + PS YI + + S
Sbjct: 397 LIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASAS 456
Query: 403 HAGLVEEGKILFESMLSKYRIHPG 426
G V E + M + R PG
Sbjct: 457 LWGKVSEARRKLGEM--EVRKDPG 478
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 237/421 (56%), Gaps = 7/421 (1%)
Query: 123 LINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSD 182
LIN Y G L ARKVFDE +R + WNA L EE L L+R+M+ G D
Sbjct: 31 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 90
Query: 183 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 242
+T V + + G++IH +++G E ++ V ++L +Y + G +
Sbjct: 91 EYTLGSVFSGSA----GLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGE 146
Query: 243 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 302
V R+MP +N V+W+ +I A+N P L L+ M + C PN +T V+V
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCR--PNKITFVTVLSSCSD 204
Query: 303 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 362
+H ++ G S++ V+++LI+MY +CG + + F + ++ D V W+S+
Sbjct: 205 LAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSM 264
Query: 363 ISMYGNNGYGKKAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 421
IS YG +G G +AI++F M Q + + ++F+ +L ACSH+GL ++G LF+ M+ KY
Sbjct: 265 ISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKY 324
Query: 422 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 481
PG++HY C+VDLLGRA LD+A +I MP + +W +LL +C IH NAE+A+R
Sbjct: 325 GFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 384
Query: 482 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYS 541
+ +++P ++ YVLLA+++A AK W DV VRK M + ++K G SW E K +++
Sbjct: 385 FKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQ 444
Query: 542 F 542
F
Sbjct: 445 F 445
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 147/328 (44%), Gaps = 10/328 (3%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
+P T+ + A S S G+ +H Y + GL+ D + + L +MY G L
Sbjct: 88 SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEI 147
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
V R + WN A G E +L LY+ M SG ++ T+ VL +C S+
Sbjct: 148 VIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSC--SDL 205
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
++ +G++IHA ++ G + V+++L+ +Y+K GC+ A F ++ V WS+
Sbjct: 206 AIRG--QGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSS 263
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
MI Y + +A+ELF+ M E + N V +++ + ++
Sbjct: 264 MISAYGFHGQGDEAIELFNTMA-EQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE 322
Query: 319 R-GLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLISMYGNNGYGKKAI 376
+ G + ++ + GR G + E + + D+V W +L+S + + A
Sbjct: 323 KYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQ 382
Query: 377 QIFENMIHQGVSPSYISFITVLCACSHA 404
++F+ ++ + P+ S VL A HA
Sbjct: 383 RVFKEILQ--IDPN-DSACYVLLANVHA 407
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 274 bits (700), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/476 (30%), Positives = 249/476 (52%), Gaps = 34/476 (7%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
R VH +++ G D D ++ +I Y + +++ ARKVFDE ER + WN+ +
Sbjct: 151 ARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQ 210
Query: 161 VGRGEELLELYRQM-NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE 219
G E+ ++Y+ M S + T V +AC S ++ G E+H ++ + +
Sbjct: 211 SGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIF----GLEVHKKMIENHIQ 266
Query: 220 ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELF--- 276
++ + ++ YAK G + YA ++F M K+SV++ A+I Y + + +A+ LF
Sbjct: 267 MDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEM 326
Query: 277 --------------------HQMVLEA------CDSIPNSVTMVSVXXXXXXXXXXXXXX 310
H+ V+ + C S PN+VT+ S+
Sbjct: 327 ESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGK 386
Query: 311 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 370
+H F +R G D+ + V ++I Y + G + +RVFD K+ +++W ++I+ Y +G
Sbjct: 387 EIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHG 446
Query: 371 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 430
A +F+ M G P ++ VL A +H+G + + +F+SML+KY I PG+EHY
Sbjct: 447 DSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHY 506
Query: 431 ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEP 490
ACMV +L RA +L +A++ I MP +P VWG+LL + + E+A A LFE+EP
Sbjct: 507 ACMVSVLSRAGKLSDAMEFISKMPIDPIAKVWGALLNGASVLGDLEIARFACDRLFEMEP 566
Query: 491 WNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 546
N GNY ++A++Y +A W + + VR M + L+K+PG SWIE +K + SF++ +
Sbjct: 567 ENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKD 622
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 117/252 (46%), Gaps = 37/252 (14%)
Query: 76 SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDC 135
S+ P+ T+ + Q+C Q S G +VH+ ++++ + D L +I Y + GSLD
Sbjct: 228 SDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDY 287
Query: 136 ARKVFDETRERT-------------------------------IYIWNAFFRALAMVGRG 164
AR +FDE E+ + WNA L
Sbjct: 288 ARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHH 347
Query: 165 EELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHV 224
EE++ +R+M G + T + +L + S L+ GKEIHA +R+G + NI+V
Sbjct: 348 EEVINSFREMIRCGSRPNTVTLSSLLPSLTYSS----NLKGGKEIHAFAIRNGADNNIYV 403
Query: 225 MTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
T+++D YAK G + A VF ++ ++W+A+I YA + A LF QM +
Sbjct: 404 TTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQM--QCL 461
Query: 285 DSIPNSVTMVSV 296
+ P+ VT+ +V
Sbjct: 462 GTKPDDVTLTAV 473
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 133/293 (45%), Gaps = 10/293 (3%)
Query: 104 VHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGR 163
+H +V + D +LA+KLI+ Y A VFDE R + +NA A
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 164 GEELLELYRQMNWSG---IPSDRFTYTYVLKACVVSEFS----VYPLQKGKEIHANILRH 216
+ L+ ++W G SD + +CV+ S + +++H ++R
Sbjct: 104 YFDAFSLF--LSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 217 GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELF 276
G++ ++ V ++ Y K I A VF M ++ VSW++MI Y+++ +++
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 277 HQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYG 336
M L D PN VT++SV VH ++ + + + NA+I Y
Sbjct: 222 KAM-LACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYA 280
Query: 337 RCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 389
+CG + +FD++ D V++ ++IS Y +G K+A+ +F M G+S
Sbjct: 281 KCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLST 333
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 94/198 (47%), Gaps = 9/198 (4%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I L + +H++ + E++ P+ T+ L+ S S+ G+++H + + +G
Sbjct: 337 MISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNG 396
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
D + Y+ T +I+ Y +LG L A++VFD ++R++ W A A A+ G + L+
Sbjct: 397 ADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFD 456
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHVMTTLLDV 231
QM G D T T VL A S S + I ++L ++ E + ++ V
Sbjct: 457 QMQCLGTKPDDVTLTAVLSAFAHSGDS----DMAQHIFDSMLTKYDIEPGVEHYACMVSV 512
Query: 232 YAKFGCISYANSVFRAMP 249
++ G +S A MP
Sbjct: 513 LSRAGKLSDAMEFISKMP 530
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 272 bits (696), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 150/484 (30%), Positives = 257/484 (53%), Gaps = 34/484 (7%)
Query: 97 SFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFR 156
S ++ + ++ ++ GL Q ++ TK+++ ++ +D A ++F++ ++++N+ R
Sbjct: 22 SRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIR 81
Query: 157 ALAMVGRGEELLELYRQMNWSGIP-SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR 215
A +++ +Y+Q+ DRFT+ ++ K+C S+ GK++H ++ +
Sbjct: 82 AYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCA----SLGSCYLGKQVHGHLCK 137
Query: 216 HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALEL 275
G ++ L+D+Y KF + A+ VF M ++ +SW++++ YA+ KA L
Sbjct: 138 FGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGL 197
Query: 276 FHQMV--------------------LEACDSI---------PNSVTMVSVXXXXXXXXXX 306
FH M+ +EA D P+ ++++SV
Sbjct: 198 FHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSL 257
Query: 307 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 366
+H + RRG V NALI MY +CG IS ++F +++ DV+SW+++IS Y
Sbjct: 258 ELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGY 317
Query: 367 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 426
+G AI+ F M V P+ I+F+ +L ACSH G+ +EG F+ M Y+I P
Sbjct: 318 AYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPK 377
Query: 427 MEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLF 486
+EHY C++D+L RA +L+ A+++ + MP +P +WGSLL SCR N ++A A L
Sbjct: 378 IEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLV 437
Query: 487 ELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 546
ELEP + GNYVLLA+IYA+ W DV +RK++ ++K PG S IEV + FVS +
Sbjct: 438 ELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGD 497
Query: 547 EDNP 550
P
Sbjct: 498 NSKP 501
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 9/210 (4%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P ++ ++ SCAQ S G+ +H Y G + + LI MY + G + A ++
Sbjct: 239 PDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQL 298
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F + + + W+ A G +E + +M + + + T+ +L AC S
Sbjct: 299 FGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSAC--SHVG 356
Query: 200 VYPLQKGKEIHANILRHGY--EENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSW 256
++ Q+G + +++R Y E I L+DV A+ G + A + + MP K +S W
Sbjct: 357 MW--QEGLR-YFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKPDSKIW 413
Query: 257 SAMI-GCYAKNDMPVKALELFHQMVLEACD 285
+++ C ++ V + + H + LE D
Sbjct: 414 GSLLSSCRTPGNLDVALVAMDHLVELEPED 443
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 271 bits (693), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 154/462 (33%), Positives = 250/462 (54%), Gaps = 10/462 (2%)
Query: 89 IQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTI 148
+++C G+ VH V GLD+D + + LI+MY + G + ARKVF E ++
Sbjct: 536 LKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV 595
Query: 149 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 208
NA + EE + L+++M G+ T+ +++AC E L G +
Sbjct: 596 VSMNALIAGYSQ-NNLEEAVVLFQEMLTRGVNPSEITFATIVEACHKPE----SLTLGTQ 650
Query: 209 IHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSVFRAMPA-KNSVSWSAMIGCYAKN 266
H I + G+ E ++ +LL +Y ++ A ++F + + K+ V W+ M+ +++N
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQN 710
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 326
+AL+ + +M + +P+ T V+V +H I D
Sbjct: 711 GFYEEALKFYKEMRHDGV--LPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDEL 768
Query: 327 VINALITMYGRCGEISIGERVFDKVKN-PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
N LI MY +CG++ +VFD+++ +VVSWNSLI+ Y NGY + A++IF++M
Sbjct: 769 TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS 828
Query: 386 GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDE 445
+ P I+F+ VL ACSHAG V +G+ +FE M+ +Y I ++H ACMVDLLGR L E
Sbjct: 829 HIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQE 888
Query: 446 AIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAE 505
A IE +P +W SLLG+CRIH + E ++ L ELEP N+ YVLL++IYA
Sbjct: 889 ADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYAS 948
Query: 506 AKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEE 547
W ++RK+M R ++KVPG SWI+V+++ + F + ++
Sbjct: 949 QGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDK 990
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 191/396 (48%), Gaps = 28/396 (7%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHK----TIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + G A+E ++ R S K T+ ++ + ++ G VH + G
Sbjct: 298 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 357
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
L + Y+ + L++MY + ++ A KVF+ E+ WNA R A G +++EL+
Sbjct: 358 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFM 417
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
M SG D FT+T +L C S + L+ G + H+ I++ +N+ V L+D+Y
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAAS----HDLEMGSQFHSIIIKKKLAKNLFVGNALVDMY 473
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
AK G + A +F M +++V+W+ +IG Y +++ +A +LF +M L C + +
Sbjct: 474 AKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNL--CGIVSDGAC 531
Query: 293 MVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK 352
+ S VH ++ GLD + ++LI MY +CG I +VF +
Sbjct: 532 LASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLP 591
Query: 353 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCAC----------- 401
VVS N+LI+ Y N ++A+ +F+ M+ +GV+PS I+F T++ AC
Sbjct: 592 EWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQ 650
Query: 402 -----SHAGLVEEGKILFESMLSKYRIHPGMEHYAC 432
+ G EG+ L S+L Y GM AC
Sbjct: 651 FHGQITKRGFSSEGEYLGISLLGMYMNSRGMTE-AC 685
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 43/389 (11%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T +++ +CA++++ GR +H ++ GL+++ Y L++MY + + AR+V
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F+ + W F G EE + ++ +M G D +
Sbjct: 218 FEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAF------------- 264
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
T+++ Y + G + A +F M + + V+W+ M
Sbjct: 265 --------------------------VTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVM 298
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I + K A+E F M + S + T+ SV VH ++
Sbjct: 299 ISGHGKRGCETVAIEYFFNMRKSSVKSTRS--TLGSVLSAIGIVANLDLGLVVHAEAIKL 356
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
GL S + V ++L++MY +C ++ +VF+ ++ + V WN++I Y +NG K +++F
Sbjct: 357 GLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELF 416
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 439
+M G + +F ++L C+ + +E G F S++ K ++ + +VD+ +
Sbjct: 417 MDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS-QFHSIIIKKKLAKNLFVGNALVDMYAK 475
Query: 440 ANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
L++A ++ E M T W +++GS
Sbjct: 476 CGALEDARQIFERMCDRDNVT-WNTIIGS 503
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 163/366 (44%), Gaps = 44/366 (12%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
G+ VH + G+D + L ++++Y + + A K FD E+ + WN+ +
Sbjct: 79 GKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFD-FLEKDVTAWNSMLSMYSS 137
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 220
+G+ ++L + + + I ++FT++ VL C ++ G++IH ++++ G E
Sbjct: 138 IGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARET----NVEFGRQIHCSMIKMGLER 193
Query: 221 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
N + L+D+YAK IS A VF + N+V W+ + Y K +P +A+ +F +M
Sbjct: 194 NSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMR 253
Query: 281 LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGE 340
E P+ + V+V I Y R G+
Sbjct: 254 DEG--HRPDHLAFVTV-----------------------------------INTYIRLGK 276
Query: 341 ISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
+ +F ++ +PDVV+WN +IS +G G AI+ F NM V + + +VL A
Sbjct: 277 LKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSA 336
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT 460
++ G ++ + K + + + +V + + +++ A K+ E + E
Sbjct: 337 IGIVANLDLGLVVHAEAI-KLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALE-EKNDV 394
Query: 461 VWGSLL 466
W +++
Sbjct: 395 FWNAMI 400
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 11/280 (3%)
Query: 202 PLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 261
L+ GK +H+ L G + + ++D+YAK +SYA F + K+ +W++M+
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 262 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 321
Y+ P K L F + L PN T V +H +++ GL
Sbjct: 134 MYSSIGKPGKVLRSF--VSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGL 191
Query: 322 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFEN 381
+ AL+ MY +C IS RVF+ + +P+ V W L S Y G ++A+ +FE
Sbjct: 192 ERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251
Query: 382 MIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRAN 441
M +G P +++F+TV+ G +++ ++LF M S P + + M+ G+
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSS-----PDVVAWNVMISGHGKRG 306
Query: 442 RLDEAIKLIEDM---PFEPGPTVWGSLLGSCRIHCNAELA 478
AI+ +M + + GS+L + I N +L
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLG 346
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 11/206 (5%)
Query: 63 RGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPY 118
+ G +++AL+ R+ P T +++ C+ SS +GR +H + D D
Sbjct: 709 QNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDEL 768
Query: 119 LATKLINMYHELGSLDCARKVFDETRERT-IYIWNAFFRALAMVGRGEELLELYRQMNWS 177
+ LI+MY + G + + +VFDE R R+ + WN+ A G E+ L+++ M S
Sbjct: 769 TSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQS 828
Query: 178 GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHVMTTLLDVYAKFG 236
I D T+ VL AC + G++I ++ ++G E + + ++D+ ++G
Sbjct: 829 HIMPDEITFLGVLTACS----HAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWG 884
Query: 237 CISYANSVFRAMPAK-NSVSWSAMIG 261
+ A+ A K ++ WS+++G
Sbjct: 885 YLQEADDFIEAQNLKPDARLWSSLLG 910
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 154/477 (32%), Positives = 251/477 (52%), Gaps = 20/477 (4%)
Query: 66 NHKQAL------EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYL 119
NH+ L +L+++ + H + LI+ C ++ G +H +V GL+ +
Sbjct: 120 NHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFP 179
Query: 120 ATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM--NWS 177
+T L++ Y + G + AR+VF+ +R + +WNA + + G +E L + M + +
Sbjct: 180 STSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKN 239
Query: 178 GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC 237
D FT++ +L AC + ++GK+IHA + + Y+ +I V T LL++YAK
Sbjct: 240 RFRGDYFTFSSLLSACRI--------EQGKQIHAILFKVSYQFDIPVATALLNMYAKSNH 291
Query: 238 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 297
+S A F +M +N VSW+AMI +A+N +A+ LF QM+LE P+ +T SV
Sbjct: 292 LSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ--PDELTFASVL 349
Query: 298 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 357
V + ++G + V N+LI+ Y R G +S F ++ PD+V
Sbjct: 350 SSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLV 409
Query: 358 SWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM 417
SW S+I ++G+ ++++Q+FE+M+ Q + P I+F+ VL ACSH GLV+EG F+ M
Sbjct: 410 SWTSVIGALASHGFAEESLQMFESML-QKLQPDKITFLEVLSACSHGGLVQEGLRCFKRM 468
Query: 418 LSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAEL 477
Y+I EHY C++DLLGRA +DEA ++ MP EP + G C IH E
Sbjct: 469 TEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRES 528
Query: 478 AERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQ-KVPGCSWI 533
+ + L E+EP NY +L++ Y W+ +RK + K PGCSW+
Sbjct: 529 MKWGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 179/399 (44%), Gaps = 16/399 (4%)
Query: 98 FSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRA 157
SD + H ++V G+ +L KL+ Y ++ D A K+FDE R I WN
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHG 111
Query: 158 LAMVG-----RGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHAN 212
+ R ++ ++ + D ++ +++ C S ++ G ++H
Sbjct: 112 VIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDST----NMKAGIQLHCL 167
Query: 213 ILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 272
+++ G E + T+L+ Y K G I A VF A+ ++ V W+A++ Y N M +A
Sbjct: 168 MVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEA 227
Query: 273 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALI 332
L M + + T S+ +H + + +PV AL+
Sbjct: 228 FGLLKLMGSDKNRFRGDYFTFSSL----LSACRIEQGKQIHAILFKVSYQFDIPVATALL 283
Query: 333 TMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYI 392
MY + +S F+ + +VVSWN++I + NG G++A+++F M+ + + P +
Sbjct: 284 NMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDEL 343
Query: 393 SFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIED 452
+F +VL +C+ + E K + ++M++K + ++ R L EA+
Sbjct: 344 TFASVLSSCAKFSAIWEIKQV-QAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHS 402
Query: 453 MPFEPGPTVWGSLLGSCRIHCNAELA-ERASAMLFELEP 490
+ EP W S++G+ H AE + + +ML +L+P
Sbjct: 403 IR-EPDLVSWTSVIGALASHGFAEESLQMFESMLQKLQP 440
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 10/203 (4%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + G ++A+ ++L P T ++ SCA+ S+ + + V + G
Sbjct: 313 MIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKG 372
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+A LI+ Y G+L A F RE + W + ALA G EE L+++
Sbjct: 373 SADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFE 432
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDV 231
M + D+ T+ VL AC +Q+G + + E T L+D+
Sbjct: 433 SM-LQKLQPDKITFLEVLSACSHGGL----VQEGLRCFKRMTEFYKIEAEDEHYTCLIDL 487
Query: 232 YAKFGCISYANSVFRAMPAKNSV 254
+ G I A+ V +MP + S
Sbjct: 488 LGRAGFIDEASDVLNSMPTEPST 510
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 271 bits (692), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 157/472 (33%), Positives = 254/472 (53%), Gaps = 13/472 (2%)
Query: 83 KTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINM--YHELGSLDCARKVF 140
+ I ++Q C +S R +H +++ +GL P + L+ GSL A+ +F
Sbjct: 6 RVIVRMLQGC---NSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLF 62
Query: 141 DE-TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS-DRFTYTYVLKACVVSEF 198
D + + WN R + + Y +M S + D FT+ + LK+C
Sbjct: 63 DHFDSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCE---- 118
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
+ + K EIH +++R G+ ++ V T+L+ Y+ G + A+ VF MP ++ VSW+
Sbjct: 119 RIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNV 178
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
MI C++ + +AL ++ +M E +S T+V++ +H
Sbjct: 179 MICCFSHVGLHNQALSMYKRMGNEGV--CGDSYTLVALLSSCAHVSALNMGVMLHRIACD 236
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
+S + V NALI MY +CG + VF+ ++ DV++WNS+I YG +G+G +AI
Sbjct: 237 IRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISF 296
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
F M+ GV P+ I+F+ +L CSH GLV+EG FE M S++ + P ++HY CMVDL G
Sbjct: 297 FRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYG 356
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVL 498
RA +L+ ++++I P +W +LLGSC+IH N EL E A L +LE +NAG+YVL
Sbjct: 357 RAGQLENSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVL 416
Query: 499 LADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
+ IY+ A S+RKL+ LQ VPG SWIE+ +++ FV ++ +P
Sbjct: 417 MTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHP 468
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 131/295 (44%), Gaps = 12/295 (4%)
Query: 73 VLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGS 132
+L S P T ++SC + S ++H ++ SG D +AT L+ Y GS
Sbjct: 98 LLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGS 157
Query: 133 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 192
++ A KVFDE R + WN + VG + L +Y++M G+ D +T +L +
Sbjct: 158 VEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSS 217
Query: 193 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN 252
C V L G +H E + V L+D+YAK G + A VF M ++
Sbjct: 218 CA----HVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRD 273
Query: 253 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV 312
++W++MI Y + V+A+ F +MV A PN++T + + V
Sbjct: 274 VLTWNSMIIGYGVHGHGVEAISFFRKMV--ASGVRPNAITFLGL--LLGCSHQGLVKEGV 329
Query: 313 HGFILRRGLDSIMPVI---NALITMYGRCGEISIG-ERVFDKVKNPDVVSWNSLI 363
F + + P + ++ +YGR G++ E ++ + D V W +L+
Sbjct: 330 EHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASSCHEDPVLWRTLL 384
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 145/417 (34%), Positives = 228/417 (54%), Gaps = 9/417 (2%)
Query: 138 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW-SGIPSDRFTYTYVLKACVVS 196
+VF + T+ N RA ++ E L+R + S +P++ + ++ LK C+ S
Sbjct: 67 RVFSQRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKS 126
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 256
L G +IH I G+ + +MTTL+D+Y+ + A VF +P +++VSW
Sbjct: 127 G----DLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSW 182
Query: 257 SAMIGCYAKNDMPVKALELFHQMV--LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 314
+ + CY +N L LF +M ++ C P+ VT + VH
Sbjct: 183 NVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVK-PDGVTCLLALQACANLGALDFGKQVHD 241
Query: 315 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 374
FI GL + + N L++MY RCG + +VF ++ +VVSW +LIS NG+GK+
Sbjct: 242 FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKE 301
Query: 375 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS-KYRIHPGMEHYACM 433
AI+ F M+ G+SP + +L ACSH+GLV EG + F+ M S +++I P + HY C+
Sbjct: 302 AIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCV 361
Query: 434 VDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNA 493
VDLLGRA LD+A LI+ M +P T+W +LLG+CR+H + EL ER + L EL+ A
Sbjct: 362 VDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIELKAEEA 421
Query: 494 GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
G+YVLL + Y+ W V +R LM ++ + PGCS IE++ ++ F+ + +P
Sbjct: 422 GDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHP 478
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 137/332 (41%), Gaps = 53/332 (15%)
Query: 89 IQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTI 148
++ C + G +H + G D L T L+++Y + A KVFDE +R
Sbjct: 120 LKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDT 179
Query: 149 YIWNAFFRALAMVGRGEELLELYRQM--NWSG-IPSDRFTYTYVLKACVVSEFSVYPLQK 205
WN F R ++L L+ +M + G + D T L+AC ++ L
Sbjct: 180 VSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACA----NLGALDF 235
Query: 206 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 265
GK++H I +G +++ TL+ +Y++ G + A VF M +N VSW+A+I A
Sbjct: 236 GKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAM 295
Query: 266 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 325
N +A+E F++M L+ G+
Sbjct: 296 NGFGKEAIEAFNEM-------------------------------------LKFGISPEE 318
Query: 326 PVINALITMYGRCGEISIGERVFDKVKN------PDVVSWNSLISMYGNNGYGKKAIQIF 379
+ L++ G ++ G FD++++ P++ + ++ + G KA +
Sbjct: 319 QTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLI 378
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
++M + P + T+L AC G VE G+
Sbjct: 379 KSM---EMKPDSTIWRTLLGACRVHGDVELGE 407
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 99/206 (48%), Gaps = 4/206 (1%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T + +Q+CA + G+ VH ++ ++GL L+ L++MY GS+D A +V
Sbjct: 215 PDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQV 274
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F RER + W A LAM G G+E +E + +M GI + T T +L AC S
Sbjct: 275 FYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLV 334
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSA 258
+ + + + + N+H ++D+ + + A S+ ++M K +S W
Sbjct: 335 AEGMMFFDRMRSGEFK--IKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRT 392
Query: 259 MIG-CYAKNDMPVKALELFHQMVLEA 283
++G C D+ + + H + L+A
Sbjct: 393 LLGACRVHGDVELGERVISHLIELKA 418
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 168/502 (33%), Positives = 254/502 (50%), Gaps = 30/502 (5%)
Query: 56 QLIQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQ 115
++I R G+ AL V R + T L+ ++ S + H+ L D +
Sbjct: 66 KIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPS--RMMEAHQ-LFDEIPEP 122
Query: 116 DPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM- 174
D + +++ Y + + A+ FD + WN A G E+ EL+ M
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMM 182
Query: 175 -----NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLL 229
+W+ + S + KA F V P++ + T ++
Sbjct: 183 EKNEVSWNAMISGYIECGDLEKASHF--FKVAPVR----------------GVVAWTAMI 224
Query: 230 DVYAKFGCISYANSVFRAMPA-KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 288
Y K + A ++F+ M KN V+W+AMI Y +N P L+LF M+ E P
Sbjct: 225 TGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIR--P 282
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
NS + S +H + + L + + + +LI+MY +CGE+ ++F
Sbjct: 283 NSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLF 342
Query: 349 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
+ +K DVV+WN++IS Y +G KA+ +F MI + P +I+F+ VL AC+HAGLV
Sbjct: 343 EVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVN 402
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
G FESM+ Y++ P +HY CMVDLLGRA +L+EA+KLI MPF P V+G+LLG+
Sbjct: 403 IGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVFGTLLGA 462
Query: 469 CRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 528
CR+H N ELAE A+ L +L NA YV LA+IYA W DV VRK M + + KVP
Sbjct: 463 CRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVP 522
Query: 529 GCSWIEVKKKIYSFVSSEEDNP 550
G SWIE++ K++ F SS+ +P
Sbjct: 523 GYSWIEIRNKVHHFRSSDRIHP 544
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 160/486 (32%), Positives = 256/486 (52%), Gaps = 43/486 (8%)
Query: 102 RDVHRYLVDSGLDQDPYLATKLINMYHELG-SLD-CARKVFDETRERTIYIWNAFFRALA 159
+ +H +++ GLDQ Y+ TKLI +LG +D AR+V + + R ++W A R A
Sbjct: 66 KQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYA 125
Query: 160 MVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR-HGY 218
+ G+ +E + +Y M I FT++ +LKAC ++ L G++ HA R G+
Sbjct: 126 IEGKFDEAIAMYGCMRKEEITPVSFTFSALLKAC----GTMKDLNLGRQFHAQTFRLRGF 181
Query: 219 ------------------------------EENIHVMTTLLDVYAKFGCISYANSVFRAM 248
E ++ T L+ YA+ G + A +F ++
Sbjct: 182 CFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESL 241
Query: 249 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 308
P K+ V+W+AM+ +A+N P +ALE F +M E + VT+
Sbjct: 242 PTKDMVAWTAMVTGFAQNAKPQEALEYFDRM--EKSGIRADEVTVAGYISACAQLGASKY 299
Query: 309 XXXVHGFILRRGLDSIMPVI--NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 366
+ G V+ +ALI MY +CG + VF + N +V +++S+I
Sbjct: 300 ADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGL 359
Query: 367 GNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 425
+G ++A+ +F M+ Q + P+ ++F+ L ACSH+GLV++G+ +F+SM + + P
Sbjct: 360 ATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQP 419
Query: 426 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 485
+HY CMVDLLGR RL EA++LI+ M EP VWG+LLG+CRIH N E+AE A+ L
Sbjct: 420 TRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHL 479
Query: 486 FELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKK-KIYSFVS 544
FELEP GNY+LL+++YA A W V VRKL+ ++ L+K P SW+ K +++ F
Sbjct: 480 FELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFP 539
Query: 545 SEEDNP 550
++P
Sbjct: 540 GNLNHP 545
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 270 bits (690), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/495 (31%), Positives = 257/495 (51%), Gaps = 11/495 (2%)
Query: 57 LIQSLCRGGNHKQALEVLW----SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + G ++ALE+ S P+ ++ V I +C++ G+++HR V G
Sbjct: 179 VISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKG 238
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ D Y+ + L++MY + L+ AR+VF + +++ WN+ + G + +E+
Sbjct: 239 FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILN 298
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+M G + T T +L AC S L GK IH ++R +I+V +L+D+Y
Sbjct: 299 RMIIEGTRPSQTTLTSILMACSRSR----NLLHGKFIHGYVIRSVVNADIYVNCSLIDLY 354
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
K G + A +VF + SW+ MI Y KA+E++ QMV + P+ VT
Sbjct: 355 FKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMV--SVGVKPDVVT 412
Query: 293 MVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK 352
SV +H I L++ +++AL+ MY +CG R+F+ +
Sbjct: 413 FTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Query: 353 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 412
DVVSW +IS YG++G ++A+ F+ M G+ P ++ + VL AC HAGL++EG
Sbjct: 473 KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLK 532
Query: 413 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP-FEPGPTVWGSLLGSCRI 471
F M SKY I P +EHY+CM+D+LGRA RL EA ++I+ P + +L +C +
Sbjct: 533 FFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCL 592
Query: 472 HCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCS 531
H L +R + +L E P +A Y++L ++YA + W + VR M + L+K PGCS
Sbjct: 593 HLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCS 652
Query: 532 WIEVKKKIYSFVSSE 546
WIE+ K+ F + +
Sbjct: 653 WIEMSDKVCHFFAED 667
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 104/354 (29%), Positives = 186/354 (52%), Gaps = 7/354 (1%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
GR +H +V SG D +A+ L+ MY + + + +VFDE ER + WN
Sbjct: 126 GRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQ 185
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 220
G E+ LEL+ +M SG + + T + AC + L++GKEIH ++ G+E
Sbjct: 186 SGEAEKALELFGRMESSGFEPNSVSLTVAISACS----RLLWLERGKEIHRKCVKKGFEL 241
Query: 221 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
+ +V + L+D+Y K C+ A VF+ MP K+ V+W++MI Y +E+ ++M+
Sbjct: 242 DEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 281 LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGE 340
+E + P+ T+ S+ +HG+++R +++ + V +LI +Y +CGE
Sbjct: 302 IEG--TRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGE 359
Query: 341 ISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
++ E VF K + SWN +IS Y + G KA+++++ M+ GV P ++F +VL A
Sbjct: 360 ANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPA 419
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 454
CS +E+GK + S +S+ R+ + ++D+ + EA ++ +P
Sbjct: 420 CSQLAALEKGKQIHLS-ISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 165/337 (48%), Gaps = 12/337 (3%)
Query: 81 SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVF 140
S K + +L + S + VH+ ++ GL +D L LIN+Y AR VF
Sbjct: 3 SSKLLSLLRECTNSTKSLRRIKLVHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVF 62
Query: 141 DETRERT-IYIWNAFFRALAMVGRGEELLELY-RQMNWSGIPSDRFTYTYVLKA--CVVS 196
+ R+ +YIWN+ + + LE++ R +N S D FT+ V+KA +
Sbjct: 63 ENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGR 122
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 256
EF G+ IH +++ GY ++ V ++L+ +YAKF + VF MP ++ SW
Sbjct: 123 EF------LGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASW 176
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
+ +I C+ ++ KALELF +M E+ PNSV++ +H
Sbjct: 177 NTVISCFYQSGEAEKALELFGRM--ESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKC 234
Query: 317 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 376
+++G + V +AL+ MYG+C + + VF K+ +V+WNS+I Y G K +
Sbjct: 235 VKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCV 294
Query: 377 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 413
+I MI +G PS + ++L ACS + + GK +
Sbjct: 295 EILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFI 331
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 132/273 (48%), Gaps = 12/273 (4%)
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY--ANSVFRAMPAKNSVS- 255
S L++ K +H IL G ++ + +L++VY F C + A VF ++ V
Sbjct: 16 STKSLRRIKLVHQRILTLGLRRDVVLCKSLINVY--FTCKDHCSARHVFENFDIRSDVYI 73
Query: 256 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 315
W++++ Y+KN M LE+F ++ L +P+S T +V +H
Sbjct: 74 WNSLMSGYSKNSMFHDTLEVFKRL-LNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTL 132
Query: 316 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 375
+++ G + V ++L+ MY + +VFD++ DV SWN++IS + +G +KA
Sbjct: 133 VVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKA 192
Query: 376 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY--ACM 433
+++F M G P+ +S + ACS +E GK + + K ++ Y + +
Sbjct: 193 LELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK---GFELDEYVNSAL 249
Query: 434 VDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
VD+ G+ + L+ A ++ + MP W S++
Sbjct: 250 VDMYGKCDCLEVAREVFQKMP-RKSLVAWNSMI 281
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 252/452 (55%), Gaps = 10/452 (2%)
Query: 102 RDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMV 161
+ VH +L+ +G + L TKLI + ++ +F +++N+ ++ + +
Sbjct: 26 QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVPLPDDFLFNSVIKSTSKL 85
Query: 162 GRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN 221
+ YR+M S + +T+T V+K+C + L+ GK +H + + G+ +
Sbjct: 86 RLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCA----DLSALRIGKGVHCHAVVSGFGLD 141
Query: 222 IHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 281
+V L+ Y+K G + A VF MP K+ V+W++++ + +N + +A+++F+QM
Sbjct: 142 TYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRE 201
Query: 282 EACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI 341
+ P+S T VS+ VH +I+ GLD + + ALI +Y RCG++
Sbjct: 202 SGFE--PDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDV 259
Query: 342 SIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ-GVSPSYISFITVLCA 400
VFDK+K +V +W ++IS YG +GYG++A+++F M G P+ ++F+ VL A
Sbjct: 260 GKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSA 319
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---P 457
C+HAGLVEEG+ +++ M YR+ PG+EH+ CMVD+LGRA LDEA K I +
Sbjct: 320 CAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKAT 379
Query: 458 GPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRK 517
P +W ++LG+C++H N +L + L LEP N G++V+L++IYA + +V +R
Sbjct: 380 APALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRD 439
Query: 518 LMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDN 549
M + L+K G S IEV+ K Y F +E +
Sbjct: 440 GMMRNNLRKQVGYSVIEVENKTYMFSMGDESH 471
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 120/224 (53%), Gaps = 5/224 (2%)
Query: 73 VLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGS 132
+L S +PS+ T +I+SCA S+ G+ VH + V SG D Y+ L+ Y + G
Sbjct: 98 MLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGD 157
Query: 133 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 192
++ AR+VFD E++I WN+ G +E ++++ QM SG D T+ +L A
Sbjct: 158 MEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSA 217
Query: 193 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN 252
C + + G +H I+ G + N+ + T L+++Y++ G + A VF M N
Sbjct: 218 CAQTG----AVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETN 273
Query: 253 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 296
+W+AMI Y + +A+ELF++M + C IPN+VT V+V
Sbjct: 274 VAAWTAMISAYGTHGYGQQAVELFNKME-DDCGPIPNNVTFVAV 316
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/477 (31%), Positives = 255/477 (53%), Gaps = 12/477 (2%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQ-DPYLATKLINMYHEL 130
E+L P + + +C+ S G+++H + V S ++ D + T +++MY +
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKY 280
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMN-WSGIPSDRFTYTYV 189
G + A ++F+ +R I WN A GR + +++M+ +G+ D T +
Sbjct: 281 GEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINL 340
Query: 190 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
L A + E G+ IH +R G+ ++ + T L+D+Y + G + A +F M
Sbjct: 341 LPASAILE--------GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 250 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 309
KN +SW+++I Y +N ALELF + L +P+S T+ S+
Sbjct: 393 EKNVISWNSIIAAYVQNGKNYSALELFQE--LWDSSLVPDSTTIASILPAYAESLSLSEG 450
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 369
+H +I++ S ++N+L+ MY CG++ + F+ + DVVSWNS+I Y +
Sbjct: 451 REIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVH 510
Query: 370 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
G+G+ ++ +F MI V+P+ +F ++L ACS +G+V+EG FESM +Y I PG+EH
Sbjct: 511 GFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEH 570
Query: 430 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
Y CM+DL+GR A + +E+MPF P +WGSLL + R H + +AE A+ +F++E
Sbjct: 571 YGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKME 630
Query: 490 PWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 546
N G YVLL ++YAEA W DV ++ LM + + + S +E K K + F + +
Sbjct: 631 HDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGD 687
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/329 (33%), Positives = 175/329 (53%), Gaps = 10/329 (3%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T +I+S A SS +G+ +H ++ G D Y+ LI++Y +LG A KVF+E
Sbjct: 132 TYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM 191
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
ER I WN+ +G G L L+++M G DRF+ L AC VY
Sbjct: 192 PERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACS----HVYSP 247
Query: 204 QKGKEIHANILRHGYEE-NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 262
+ GKEIH + +R E ++ VMT++LD+Y+K+G +SYA +F M +N V+W+ MIGC
Sbjct: 248 KMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGC 307
Query: 263 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 322
YA+N A F +M E P+ +T +++ +HG+ +RRG
Sbjct: 308 YARNGRVTDAFLCFQKMS-EQNGLQPDVITSINL----LPASAILEGRTIHGYAMRRGFL 362
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
M + ALI MYG CG++ E +FD++ +V+SWNS+I+ Y NG A+++F+ +
Sbjct: 363 PHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQEL 422
Query: 383 IHQGVSPSYISFITVLCACSHAGLVEEGK 411
+ P + ++L A + + + EG+
Sbjct: 423 WDSSLVPDSTTIASILPAYAESLSLSEGR 451
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 183/365 (50%), Gaps = 16/365 (4%)
Query: 106 RYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGE 165
RY V ++ DP L T+ + + + ++ A ++FDE + ++WN + G
Sbjct: 55 RYKVTKQVN-DPAL-TRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCGLYI 112
Query: 166 ELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVM 225
E ++ Y +M ++G+ +D FTY +V+K+ + L++GK+IHA +++ G+ +++V
Sbjct: 113 EAVQFYSRMVFAGVKADTFTYPFVIKSVA----GISSLEEGKKIHAMVIKLGFVSDVYVC 168
Query: 226 TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 285
+L+ +Y K GC A VF MP ++ VSW++MI Y +L LF +M+ C
Sbjct: 169 NSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML--KCG 226
Query: 286 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS-IMPVINALITMYGRCGEISIG 344
P+ + +S +H +R +++ + V+ +++ MY + GE+S
Sbjct: 227 FKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA 286
Query: 345 ERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ-GVSPSYISFITVLCACSH 403
ER+F+ + ++V+WN +I Y NG A F+ M Q G+ P I+ I +L A +
Sbjct: 287 ERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA- 345
Query: 404 AGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWG 463
+ EG+ + + + + P M ++D+ G +L A ++I D E W
Sbjct: 346 ---ILEGRTIHGYAMRRGFL-PHMVLETALIDMYGECGQLKSA-EVIFDRMAEKNVISWN 400
Query: 464 SLLGS 468
S++ +
Sbjct: 401 SIIAA 405
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 9/198 (4%)
Query: 57 LIQSLCRGGNHKQALEV---LW-SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + + G + ALE+ LW S P TI ++ + A+ S S+GR++H Y+V S
Sbjct: 402 IIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSR 461
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ + L++MY G L+ ARK F+ + + WN+ A A+ G G + L+
Sbjct: 462 YWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFS 521
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDV 231
+M S + ++ T+ +L AC +S + +G E ++ R +G + I +LD+
Sbjct: 522 EMIASRVNPNKSTFASLLAACSISGM----VDEGWEYFESMKREYGIDPGIEHYGCMLDL 577
Query: 232 YAKFGCISYANSVFRAMP 249
+ G S A MP
Sbjct: 578 IGRTGNFSAAKRFLEEMP 595
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 269 bits (688), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 159/497 (31%), Positives = 262/497 (52%), Gaps = 14/497 (2%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI L + G+ AL + R P+ T ++ A G+ +H V G
Sbjct: 79 LISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG 138
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
D ++ +MY + D ARK+FDE ER + WNAF GR E +E +
Sbjct: 139 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 198
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+ + T+ L AC S++ L G ++H +LR G++ ++ V L+D Y
Sbjct: 199 EFRRIDGHPNSITFCAFLNAC--SDW--LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFY 254
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
K I + +F M KN+VSW +++ Y +N KA L+ + D + S
Sbjct: 255 GKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLY---LRSRKDIVETSDF 311
Query: 293 MVS-VXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV 351
M+S V +H ++ ++ + V +AL+ MYG+CG I E+ FD++
Sbjct: 312 MISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEM 371
Query: 352 KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV--SPSYISFITVLCACSHAGLVEE 409
++V+ NSLI Y + G A+ +FE M +G +P+Y++F+++L ACS AG VE
Sbjct: 372 PEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVEN 431
Query: 410 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
G +F+SM S Y I PG EHY+C+VD+LGRA ++ A + I+ MP +P +VWG+L +C
Sbjct: 432 GMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQNAC 491
Query: 470 RIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPG 529
R+H +L A+ LF+L+P ++GN+VLL++ +A A W++ +VR+ + ++K G
Sbjct: 492 RMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKKGAG 551
Query: 530 CSWIEVKKKIYSFVSSE 546
SWI VK ++++F + +
Sbjct: 552 YSWITVKNQVHAFQAKD 568
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 196/444 (44%), Gaps = 17/444 (3%)
Query: 81 SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDP--YLATKLINMYHELGSLDCARK 138
S + +L+++ SS GR VH +V + LD P +LA LINMY +L + AR
Sbjct: 5 SADALGLLLKNAISASSMRLGRVVHARIVKT-LDSPPPPFLANYLINMYSKLDHPESARL 63
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
V T R + W + LA G L + +M G+ + FT+ KA
Sbjct: 64 VLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRL 123
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
V GK+IHA ++ G ++ V + D+Y K A +F +P +N +W+A
Sbjct: 124 PV----TGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNA 179
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
I + P +A+E F + D PNS+T + +HG +LR
Sbjct: 180 FISNSVTDGRPREAIEAF--IEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLR 237
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
G D+ + V N LI YG+C +I E +F ++ + VSW SL++ Y N +KA +
Sbjct: 238 SGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVL 297
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
+ V S +VL AC+ +E G+ + + K + + + +VD+ G
Sbjct: 298 YLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV-KACVERTIFVGSALVDMYG 356
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAG---N 495
+ ++++ + ++MP E SL+G + + + A A+ E+ P G N
Sbjct: 357 KCGCIEDSEQAFDEMP-EKNLVTRNSLIGG---YAHQGQVDMALALFEEMAPRGCGPTPN 412
Query: 496 YVLLADIYAEAKMWSDVKSVRKLM 519
Y+ + + V++ K+
Sbjct: 413 YMTFVSLLSACSRAGAVENGMKIF 436
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 269 bits (687), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 262/513 (51%), Gaps = 14/513 (2%)
Query: 42 PVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWS----ERNPSHKTIEVLIQSCAQKSS 97
P KD+ S L+ S G AL +L S ++ ++ T + +C
Sbjct: 306 PTKDLISWN-----SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 360
Query: 98 FSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRA 157
F GR +H +V SGL + + L++MY ++G + +R+V + R + WNA
Sbjct: 361 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 420
Query: 158 LAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG 217
A ++ L ++ M G+ S+ T VL AC++ L++GK +HA I+ G
Sbjct: 421 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG---DLLERGKPLHAYIVSAG 477
Query: 218 YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFH 277
+E + HV +L+ +YAK G +S + +F + +N ++W+AM+ A + + L+L
Sbjct: 478 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 537
Query: 278 QMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR 337
+M + + + +HG ++ G + + NA MY +
Sbjct: 538 KM--RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 595
Query: 338 CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
CGEI ++ N + SWN LIS G +GY ++ F M+ G+ P +++F+++
Sbjct: 596 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 655
Query: 398 LCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEP 457
L ACSH GLV++G ++ + + + P +EH C++DLLGR+ RL EA I MP +P
Sbjct: 656 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 715
Query: 458 GPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRK 517
VW SLL SC+IH N + +A+ L +LEP + YVL ++++A W DV++VRK
Sbjct: 716 NDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 775
Query: 518 LMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
MG + ++K CSW+++K K+ SF + +P
Sbjct: 776 QMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHP 808
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 201/390 (51%), Gaps = 11/390 (2%)
Query: 80 PSHKTIEVLIQSCAQKSS-FSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
PS I L+ +C + S F +G VH ++ SGL D Y++T ++++Y G + C+RK
Sbjct: 39 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 98
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC-VVSE 197
VF+E +R + W + + G EE++++Y+ M G+ + + + V+ +C ++ +
Sbjct: 99 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 158
Query: 198 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
S+ G++I +++ G E + V +L+ + G + YAN +F M ++++SW+
Sbjct: 159 ESL-----GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 213
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
++ YA+N ++ +F ++ D + NS T+ ++ +HG ++
Sbjct: 214 SIAAAYAQNGHIEESFRIF-SLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGLVV 271
Query: 318 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
+ G DS++ V N L+ MY G VF ++ D++SWNSL++ + N+G A+
Sbjct: 272 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 331
Query: 378 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 437
+ +MI G S +Y++F + L AC E+G+IL ++ + + A +V +
Sbjct: 332 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-LVSMY 390
Query: 438 GRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
G+ + E+ +++ MP W +L+G
Sbjct: 391 GKIGEMSESRRVLLQMP-RRDVVAWNALIG 419
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 173/355 (48%), Gaps = 16/355 (4%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
GR +H +V G D + L+ MY G A VF + + + WN+ +
Sbjct: 263 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 322
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 220
GR + L L M SG + T+T L AC +F +KG+ +H ++ G
Sbjct: 323 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF----FEKGRILHGLVVVSGLFY 378
Query: 221 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
N + L+ +Y K G +S + V MP ++ V+W+A+IG YA+++ P KAL F M
Sbjct: 379 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 438
Query: 281 LEACDSIPNSVTMVSVXXX-XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 339
+E S N +T+VSV +H +I+ G +S V N+LITMY +CG
Sbjct: 439 VEGVSS--NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 496
Query: 340 EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
++S + +F+ + N ++++WN++++ ++G+G++ +++ M GVS SF L
Sbjct: 497 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 556
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEH----YACMVDLLGRANRLDEAIKLI 450
A + ++EEG+ L + G EH + D+ + + E +K++
Sbjct: 557 AAAKLAVLEEGQ-----QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 606
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 169/341 (49%), Gaps = 9/341 (2%)
Query: 81 SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVF 140
+ ++ ++I SC S GR + +V SGL+ + LI+M +G++D A +F
Sbjct: 142 NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIF 201
Query: 141 DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSV 200
D+ ER WN+ A A G EE ++ M D T V + ++S
Sbjct: 202 DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF---HDEVNSTTV--STLLSVLGH 256
Query: 201 YPLQK-GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
QK G+ IH +++ G++ + V TLL +YA G AN VF+ MP K+ +SW+++
Sbjct: 257 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 316
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
+ + + + AL L M+ + N VT S +HG ++
Sbjct: 317 MASFVNDGRSLDALGLLCSMI--SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS 374
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
GL + NAL++MYG+ GE+S RV ++ DVV+WN+LI Y + KA+ F
Sbjct: 375 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 434
Query: 380 ENMIHQGVSPSYISFITVLCACSHAG-LVEEGKILFESMLS 419
+ M +GVS +YI+ ++VL AC G L+E GK L ++S
Sbjct: 435 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 475
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 152/324 (46%), Gaps = 19/324 (5%)
Query: 151 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 210
WN + VG E +E +R+M GI F ++ AC S ++G ++H
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSG---SMFREGVQVH 65
Query: 211 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV 270
+ + G +++V T +L +Y +G +S + VF MP +N VSW++++ Y+ P
Sbjct: 66 GFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPE 125
Query: 271 KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINA 330
+ ++++ M E NS+++ V + G +++ GL+S + V N+
Sbjct: 126 EVIDIYKGMRGEGVGCNENSMSL--VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENS 183
Query: 331 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM--IHQGVS 388
LI+M G G + +FD++ D +SWNS+ + Y NG+ +++ +IF M H V+
Sbjct: 184 LISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVN 243
Query: 389 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR----ANRLD 444
+ +S T+L H + G+ + + G + C+ + L R A R
Sbjct: 244 STTVS--TLLSVLGHVDHQKWGR-----GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296
Query: 445 EAIKLIEDMPFEPGPTVWGSLLGS 468
EA + + MP + W SL+ S
Sbjct: 297 EANLVFKQMPTKD-LISWNSLMAS 319
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 25/229 (10%)
Query: 248 MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD--SIPNSVTMVS-VXXXXXXXX 304
MP +N VSW+ M+ + + ++ +E F +M CD P+S + S V
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKM----CDLGIKPSSFVIASLVTACGRSGS 56
Query: 305 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 364
VHGF+ + GL S + V A++ +YG G +S +VF+++ + +VVSW SL+
Sbjct: 57 MFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMV 116
Query: 365 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE--------GKILFES 416
Y + G ++ I I++ M +GV + S V+ +C GL+++ G+++
Sbjct: 117 GYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSG 173
Query: 417 MLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSL 465
+ SK + ++ +LG +D A + + M E W S+
Sbjct: 174 LESKLAVEN------SLISMLGSMGNVDYANYIFDQMS-ERDTISWNSI 215
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 268 bits (686), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 154/513 (30%), Positives = 262/513 (51%), Gaps = 14/513 (2%)
Query: 42 PVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWS----ERNPSHKTIEVLIQSCAQKSS 97
P KD+ S L+ S G AL +L S ++ ++ T + +C
Sbjct: 323 PTKDLISWN-----SLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF 377
Query: 98 FSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRA 157
F GR +H +V SGL + + L++MY ++G + +R+V + R + WNA
Sbjct: 378 FEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGG 437
Query: 158 LAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG 217
A ++ L ++ M G+ S+ T VL AC++ L++GK +HA I+ G
Sbjct: 438 YAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPG---DLLERGKPLHAYIVSAG 494
Query: 218 YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFH 277
+E + HV +L+ +YAK G +S + +F + +N ++W+AM+ A + + L+L
Sbjct: 495 FESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVS 554
Query: 278 QMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR 337
+M + + + +HG ++ G + + NA MY +
Sbjct: 555 KM--RSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSK 612
Query: 338 CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
CGEI ++ N + SWN LIS G +GY ++ F M+ G+ P +++F+++
Sbjct: 613 CGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSL 672
Query: 398 LCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEP 457
L ACSH GLV++G ++ + + + P +EH C++DLLGR+ RL EA I MP +P
Sbjct: 673 LTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKP 732
Query: 458 GPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRK 517
VW SLL SC+IH N + +A+ L +LEP + YVL ++++A W DV++VRK
Sbjct: 733 NDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRK 792
Query: 518 LMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
MG + ++K CSW+++K K+ SF + +P
Sbjct: 793 QMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHP 825
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 201/390 (51%), Gaps = 11/390 (2%)
Query: 80 PSHKTIEVLIQSCAQKSS-FSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
PS I L+ +C + S F +G VH ++ SGL D Y++T ++++Y G + C+RK
Sbjct: 56 PSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRK 115
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC-VVSE 197
VF+E +R + W + + G EE++++Y+ M G+ + + + V+ +C ++ +
Sbjct: 116 VFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKD 175
Query: 198 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
S+ G++I +++ G E + V +L+ + G + YAN +F M ++++SW+
Sbjct: 176 ESL-----GRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWN 230
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
++ YA+N ++ +F ++ D + NS T+ ++ +HG ++
Sbjct: 231 SIAAAYAQNGHIEESFRIF-SLMRRFHDEV-NSTTVSTLLSVLGHVDHQKWGRGIHGLVV 288
Query: 318 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
+ G DS++ V N L+ MY G VF ++ D++SWNSL++ + N+G A+
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALG 348
Query: 378 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 437
+ +MI G S +Y++F + L AC E+G+IL ++ + + A +V +
Sbjct: 349 LLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-LVSMY 407
Query: 438 GRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
G+ + E+ +++ MP W +L+G
Sbjct: 408 GKIGEMSESRRVLLQMP-RRDVVAWNALIG 436
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 173/355 (48%), Gaps = 16/355 (4%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
GR +H +V G D + L+ MY G A VF + + + WN+ +
Sbjct: 280 GRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN 339
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 220
GR + L L M SG + T+T L AC +F +KG+ +H ++ G
Sbjct: 340 DGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDF----FEKGRILHGLVVVSGLFY 395
Query: 221 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
N + L+ +Y K G +S + V MP ++ V+W+A+IG YA+++ P KAL F M
Sbjct: 396 NQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMR 455
Query: 281 LEACDSIPNSVTMVSVXXXXXXXXXXXXXXX-VHGFILRRGLDSIMPVINALITMYGRCG 339
+E S N +T+VSV +H +I+ G +S V N+LITMY +CG
Sbjct: 456 VEGVSS--NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCG 513
Query: 340 EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
++S + +F+ + N ++++WN++++ ++G+G++ +++ M GVS SF L
Sbjct: 514 DLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLS 573
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEH----YACMVDLLGRANRLDEAIKLI 450
A + ++EEG+ L + G EH + D+ + + E +K++
Sbjct: 574 AAAKLAVLEEGQ-----QLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKML 623
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/341 (30%), Positives = 169/341 (49%), Gaps = 9/341 (2%)
Query: 81 SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVF 140
+ ++ ++I SC S GR + +V SGL+ + LI+M +G++D A +F
Sbjct: 159 NENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIF 218
Query: 141 DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSV 200
D+ ER WN+ A A G EE ++ M D T V + ++S
Sbjct: 219 DQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRF---HDEVNSTTV--STLLSVLGH 273
Query: 201 YPLQK-GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
QK G+ IH +++ G++ + V TLL +YA G AN VF+ MP K+ +SW+++
Sbjct: 274 VDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSL 333
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
+ + + + AL L M+ + N VT S +HG ++
Sbjct: 334 MASFVNDGRSLDALGLLCSMI--SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVS 391
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
GL + NAL++MYG+ GE+S RV ++ DVV+WN+LI Y + KA+ F
Sbjct: 392 GLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAF 451
Query: 380 ENMIHQGVSPSYISFITVLCACSHAG-LVEEGKILFESMLS 419
+ M +GVS +YI+ ++VL AC G L+E GK L ++S
Sbjct: 452 QTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVS 492
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 163/349 (46%), Gaps = 19/349 (5%)
Query: 126 MYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 185
MY + G + AR +FD R WN + VG E +E +R+M GI F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 186 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 245
++ AC S ++G ++H + + G +++V T +L +Y +G +S + VF
Sbjct: 61 IASLVTACGRSG---SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 246 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 305
MP +N VSW++++ Y+ P + ++++ M E NS+++ V
Sbjct: 118 EEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSL--VISSCGLLKD 175
Query: 306 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISM 365
+ G +++ GL+S + V N+LI+M G G + +FD++ D +SWNS+ +
Sbjct: 176 ESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAA 235
Query: 366 YGNNGYGKKAIQIFENM--IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 423
Y NG+ +++ +IF M H V+ + +S T+L H + G+ + +
Sbjct: 236 YAQNGHIEESFRIFSLMRRFHDEVNSTTVS--TLLSVLGHVDHQKWGR-----GIHGLVV 288
Query: 424 HPGMEHYACMVDLLGR----ANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
G + C+ + L R A R EA + + MP + W SL+ S
Sbjct: 289 KMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKD-LISWNSLMAS 336
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 268 bits (685), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 164/478 (34%), Positives = 239/478 (50%), Gaps = 28/478 (5%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P + T L +SC+ G +H + G D Y++T +++MY + G + CAR
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNA 135
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP--SDRFTYTYVLKACVVSE 197
FDE R+ W A G + +L+ QM P D Y ++ V S
Sbjct: 136 FDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM-----PHVKDVVIYNAMMDGFVKS- 189
Query: 198 FSVYPLQKGKEIHANILRHGYEENIH----VMTTLLDVYAKFGCISYANSVFRAMPAKNS 253
G A R ++E H TT++ Y I A +F AMP +N
Sbjct: 190 --------GDMTSA---RRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNL 238
Query: 254 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXV 312
VSW+ MIG Y +N P + + LF +M +A S+ P+ VT++SV
Sbjct: 239 VSWNTMIGGYCQNKQPQEGIRLFQEM--QATTSLDPDDVTILSVLPAISDTGALSLGEWC 296
Query: 313 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 372
H F+ R+ LD + V A++ MY +CGEI +R+FD++ V SWN++I Y NG
Sbjct: 297 HCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNA 356
Query: 373 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 432
+ A+ +F M+ + P I+ + V+ AC+H GLVEEG+ F M + ++ +EHY C
Sbjct: 357 RAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGC 414
Query: 433 MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWN 492
MVDLLGRA L EA LI +MPFEP + S L +C + + E AER ELEP N
Sbjct: 415 MVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVELEPQN 474
Query: 493 AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
GNYVLL ++YA K W D V+ +M K +K GCS IE+ + F+S + +P
Sbjct: 475 DGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHP 532
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 109/257 (42%), Gaps = 13/257 (5%)
Query: 213 ILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIGCYAKNDMPVK 271
+LRH E N+ + T L + A I YA +F P + +S ++MI Y +
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 272 ALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINAL 331
+ L+ + E C + P++ T ++ +H I R G + M V +
Sbjct: 61 SFALYRDLRKETCFA-PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGV 119
Query: 332 ITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSY 391
+ MY + G++ FD++ + VSW +LIS Y G A ++F+ M H
Sbjct: 120 VDMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDV 176
Query: 392 ISFITVLCACSHAGLVEEGKILFESMLSKYRIH-PGMEHYACMVDLLGRANRLDEAIKLI 450
+ + ++ +G + + LF+ M K I M H C + +D A KL
Sbjct: 177 VIYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNI------KDIDAARKLF 230
Query: 451 EDMPFEPGPTVWGSLLG 467
+ MP E W +++G
Sbjct: 231 DAMP-ERNLVSWNTMIG 246
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 76/171 (44%), Gaps = 5/171 (2%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
+P TI ++ + + + S G H ++ LD+ + T +++MY + G ++ A++
Sbjct: 271 DPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKR 330
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
+FDE E+ + WNA A+ G L+L+ M P D T V+ AC
Sbjct: 331 IFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEEKP-DEITMLAVITACNHGGL 389
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
+++G++ + G I ++D+ + G + A + MP
Sbjct: 390 ----VEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMP 436
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 268 bits (684), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 172/591 (29%), Positives = 274/591 (46%), Gaps = 103/591 (17%)
Query: 63 RGGNHKQALEVL----WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPY 118
R GN ++A+E+ +S T+ L+Q C+ K F++GR +H Y++ GL+ +
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 119 LATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG 178
+ LI MY G L+ +RKVF+ ++R + WN+ + +G ++ + L +M G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 179 IPSDRFTYTYVLKACVVSEFS--------------VYP-----------------LQKGK 207
+ D T+ +L S + P L+ GK
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI-----GC 262
IH ILR+ +++V TTL+D+Y K G + YA VF M AKN V+W++++ C
Sbjct: 246 AIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYAC 305
Query: 263 ------------------------------YAKNDMPVKALELFHQM------------- 279
YA P KAL++ +M
Sbjct: 306 LLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWT 365
Query: 280 -VLEACDSI-------------------PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
+ C PN+ TM ++ VHGF LR+
Sbjct: 366 AIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRK 425
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
L V AL+ MYG+ G++ +F +KN + SWN ++ Y G G++ I F
Sbjct: 426 NLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAF 485
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 439
M+ G+ P I+F +VL C ++GLV+EG F+ M S+Y I P +EH +CMVDLLGR
Sbjct: 486 SVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGR 545
Query: 440 ANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLL 499
+ LDEA I+ M +P T+WG+ L SC+IH + ELAE A L LEP N+ NY+++
Sbjct: 546 SGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMM 605
Query: 500 ADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
++Y+ W DV+ +R LM ++ SWI++ + ++ F + + +P
Sbjct: 606 INLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHP 656
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 164/409 (40%), Gaps = 78/409 (19%)
Query: 101 GRDVHRYLVDSGLDQ-DPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALA 159
G +H L+ GLD D + + + Y SL A K+FDE +R WN
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 160 MVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE 219
G E+ +EL+R+M +SG + T +L+ C E +G++IH +LR G E
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKE----GFAEGRQIHGYVLRLGLE 121
Query: 220 ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM 279
N+ + +L+ +Y++ G + + VF +M +N SW++++ Y K A+ L +M
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 280 VLEAC-----------------------DSI------------PNSVTMVSVXXXXXXXX 304
E C D+I P++ ++ S+
Sbjct: 182 --EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPG 239
Query: 305 XXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFD--KVKN--------- 353
+HG+ILR L + V LI MY + G + VFD KN
Sbjct: 240 HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 354 ------------------------PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 389
PD ++WNSL S Y G +KA+ + M +GV+P
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 390 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
+ +S+ + CS G +F M + + P + ++ +LG
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKM-QEEGVGPNAATMSTLLKILG 407
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 247/472 (52%), Gaps = 6/472 (1%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
P T+ ++++C S + ++ Y++ +G + + LI++Y + G + AR
Sbjct: 304 KPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARD 363
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
VF+ + WN+ G E ++L++ M +D TY ++
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVST---- 419
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
+ L+ GK +H+N ++ G ++ V L+D+YAK G + + +F +M ++V+W+
Sbjct: 420 RLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNT 479
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
+I + L++ QM + +P+ T + +H +LR
Sbjct: 480 VISACVRFGDFATGLQVTTQM--RKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLR 537
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
G +S + + NALI MY +CG + RVF+++ DVV+W +I YG G G+KA++
Sbjct: 538 FGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALET 597
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
F +M G+ P + FI ++ ACSH+GLV+EG FE M + Y+I P +EHYAC+VDLL
Sbjct: 598 FADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLS 657
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVL 498
R+ ++ +A + I+ MP +P ++W S+L +CR + E AER S + EL P + G +L
Sbjct: 658 RSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSIL 717
Query: 499 LADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
++ YA + W V +RK + + + K PG SWIEV K ++ F S ++ P
Sbjct: 718 ASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVGKNVHVFSSGDDSAP 769
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 216/448 (48%), Gaps = 22/448 (4%)
Query: 28 RLPVCFVSINPSANPVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWSER----NPSHK 83
R P +S+ +P K++ +I++ + G +ALE R +P
Sbjct: 53 REPASSLSVFRRVSPAKNV-----YLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKY 107
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T +I++CA G V+ ++D G + D ++ L++MY +G L AR+VFDE
Sbjct: 108 TFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEM 167
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
R + WN+ + G EE LE+Y ++ S I D FT + VL A ++ +
Sbjct: 168 PVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAF----GNLLVV 223
Query: 204 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 263
++G+ +H L+ G + V L+ +Y KF + A VF M ++SVS++ MI Y
Sbjct: 224 KQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGY 283
Query: 264 AKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 322
K +M +++ +F LE D P+ +T+ SV ++ ++L+ G
Sbjct: 284 LKLEMVEESVRMF----LENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
V N LI +Y +CG++ VF+ ++ D VSWNS+IS Y +G +A+++F+ M
Sbjct: 340 LESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMM 399
Query: 383 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANR 442
+ +I+++ ++ + ++ GK L + + K I + ++D+ +
Sbjct: 400 MIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGI-KSGICIDLSVSNALIDMYAKCGE 458
Query: 443 LDEAIKLIEDMPFEPGPTV-WGSLLGSC 469
+ +++K+ M G TV W +++ +C
Sbjct: 459 VGDSLKIFSSMG--TGDTVTWNTVISAC 484
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 175/333 (52%), Gaps = 14/333 (4%)
Query: 90 QSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL----GSLDCARKVFDETRE 145
++ + S+ ++ R +H ++ GLD + + KLI+ Y SL R+V +
Sbjct: 12 RALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV---SPA 68
Query: 146 RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQK 205
+ +Y+WN+ RA + G E LE Y ++ S + D++T+ V+KAC ++ +
Sbjct: 69 KNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACA----GLFDAEM 124
Query: 206 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 265
G ++ IL G+E ++ V L+D+Y++ G ++ A VF MP ++ VSW+++I Y+
Sbjct: 125 GDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSS 184
Query: 266 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 325
+ +ALE++H+ L+ +P+S T+ SV +HGF L+ G++S++
Sbjct: 185 HGYYEEALEIYHE--LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVV 242
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
V N L+ MY + + RVFD++ D VS+N++I Y ++++++F + Q
Sbjct: 243 VVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ 302
Query: 386 GVSPSYISFITVLCACSHAGLVEEGKILFESML 418
P ++ +VL AC H + K ++ ML
Sbjct: 303 -FKPDLLTVSSVLRACGHLRDLSLAKYIYNYML 334
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 10/244 (4%)
Query: 57 LIQSLCRGGNHKQALEV----LWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + G+ +A+++ + E H T +LI + + G+ +H + SG
Sbjct: 379 IISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG 438
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ D ++ LI+MY + G + + K+F WN A G L++
Sbjct: 439 ICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTT 498
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
QM S + D T+ L C S+ + GKEIH +LR GYE + + L+++Y
Sbjct: 499 QMRKSEVVPDMATFLVTLPMCA----SLAAKRLGKEIHCCLLRFGYESELQIGNALIEMY 554
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
+K GC+ ++ VF M ++ V+W+ MI Y KALE F M E +P+SV
Sbjct: 555 SKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADM--EKSGIVPDSVV 612
Query: 293 MVSV 296
+++
Sbjct: 613 FIAI 616
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 11/219 (5%)
Query: 57 LIQSLCRGGNHKQALEVLW----SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + R G+ L+V SE P T V + CA ++ G+++H L+ G
Sbjct: 480 VISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFG 539
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ + + LI MY + G L+ + +VF+ R + W A M G GE+ LE +
Sbjct: 540 YESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFA 599
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRH-GYEENIHVMTTLLDV 231
M SGI D + ++ AC S + +G + H + I ++D+
Sbjct: 600 DMEKSGIVPDSVVFIAIIYACSHSGL----VDEGLACFEKMKTHYKIDPMIEHYACVVDL 655
Query: 232 YAKFGCISYANSVFRAMPAKNSVS-WSAMI-GCYAKNDM 268
++ IS A +AMP K S W++++ C DM
Sbjct: 656 LSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDM 694
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/489 (29%), Positives = 254/489 (51%), Gaps = 41/489 (8%)
Query: 97 SFSDGRDVHRYLVDSGLDQDPYLATKLINM--YHELGSLDCARKVFDETRERTIYIWNAF 154
+F + R +H L G +D +L + + LD A ++ D + + T++ N+
Sbjct: 18 TFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSM 77
Query: 155 FRALAMVGRGEELLELYRQMNWSG--IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHAN 212
RA E+ + YR++ SG + D +T ++++AC + + G ++H
Sbjct: 78 IRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACT----GLRMRETGLQVHGM 133
Query: 213 ILRHGYEENIHVMTTLLDVYAKFGCIS-------------------------------YA 241
+R G++ + HV T L+ +YA+ GC+ +A
Sbjct: 134 TIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFA 193
Query: 242 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 301
+F MP ++ ++W+AMI YA+ +AL +FH M LE N V M+SV
Sbjct: 194 RKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKV--NGVAMISVLSACT 251
Query: 302 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 361
H +I R + + + L+ +Y +CG++ VF ++ +V +W+S
Sbjct: 252 QLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSS 311
Query: 362 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 421
++ NG+G+K +++F M GV+P+ ++F++VL CS G V+EG+ F+SM +++
Sbjct: 312 ALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEF 371
Query: 422 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 481
I P +EHY C+VDL RA RL++A+ +I+ MP +P VW SLL + R++ N EL A
Sbjct: 372 GIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLA 431
Query: 482 SAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYS 541
S + ELE N G YVLL++IYA++ W +V VR+ M + ++K PGCS +EV +++
Sbjct: 432 SKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHE 491
Query: 542 FVSSEEDNP 550
F ++ +P
Sbjct: 492 FFVGDKSHP 500
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 137/343 (39%), Gaps = 77/343 (22%)
Query: 76 SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDC 135
++ P + T+ L+Q+C G VH + G D DP++ T LI++Y ELG LD
Sbjct: 102 NDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDS 161
Query: 136 -------------------------------ARKVFDETRERTIYIWNAFFRALAMVGRG 164
ARK+F+ ER WNA A VG
Sbjct: 162 CHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGES 221
Query: 165 EELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHV 224
E L ++ M G+ + VL AC + L +G+ H+ I R+ + + +
Sbjct: 222 REALNVFHLMQLEGVKVNGVAMISVLSACT----QLGALDQGRWAHSYIERNKIKITVRL 277
Query: 225 MTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
TTL+D+YAK G + A VF M KN +WS+ + A N K LELF M +
Sbjct: 278 ATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGV 337
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 344
PN+VT VSV RG + G + G
Sbjct: 338 --TPNAVTFVSVL---------------------RGCSVV--------------GFVDEG 360
Query: 345 ERVFDKVKN-----PDVVSWNSLISMYGNNGYGKKAIQIFENM 382
+R FD ++N P + + L+ +Y G + A+ I + M
Sbjct: 361 QRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQM 403
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 94/176 (53%), Gaps = 8/176 (4%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
++ +C Q + GR H Y+ + + LAT L+++Y + G ++ A +VF E+
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
+Y W++ LAM G GE+ LEL+ M G+ + T+ VL+ C V F + +G+
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGF----VDEGQ 361
Query: 208 EIHANILRH--GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMI 260
H + +R+ G E + L+D+YA+ G + A S+ + MP K ++ WS+++
Sbjct: 362 R-HFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLL 416
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/439 (33%), Positives = 240/439 (54%), Gaps = 31/439 (7%)
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQ 173
D+D T +I+ + G +D AR++FDE ER++ W R ++ +++
Sbjct: 169 DKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDV 228
Query: 174 MNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVM-------- 225
M ++T +L V Q G+ A EE VM
Sbjct: 229 MP----EKTEVSWTSMLMGYV---------QNGRIEDA-------EELFEVMPVKPVIAC 268
Query: 226 TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 285
++ + G I+ A VF +M +N SW +I + +N ++AL+LF ++++
Sbjct: 269 NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLF--ILMQKQG 326
Query: 286 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGE 345
P T++S+ VH ++R D + V + L+TMY +CGE+ +
Sbjct: 327 VRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSK 386
Query: 346 RVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHA 404
+FD+ + D++ WNS+IS Y ++G G++A+++F M G P+ ++F+ L ACS+A
Sbjct: 387 LIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYA 446
Query: 405 GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGS 464
G+VEEG ++ESM S + + P HYACMVD+LGRA R +EA+++I+ M EP VWGS
Sbjct: 447 GMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGS 506
Query: 465 LLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVL 524
LLG+CR H ++AE + L E+EP N+G Y+LL+++YA W+DV +RKLM R++
Sbjct: 507 LLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLV 566
Query: 525 QKVPGCSWIEVKKKIYSFV 543
+K PGCSW EV+ K+++F
Sbjct: 567 RKSPGCSWTEVENKVHAFT 585
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 141/364 (38%), Gaps = 82/364 (22%)
Query: 117 PYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-- 174
P A I +G + ARK+FD ++I WN+ + +L+ +M
Sbjct: 17 PPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPD 76
Query: 175 ----NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLD 230
+W+G+ S + +A V F + P E N+ T L+
Sbjct: 77 RNIISWNGLVSGYMKNGEIDEARKV--FDLMP----------------ERNVVSWTALVK 118
Query: 231 VYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
Y G + A S+F MP KN VSW+ M+ + ++ A +L+ + IP+
Sbjct: 119 GYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY--------EMIPDK 170
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK 350
+ +HG + G + +FD+
Sbjct: 171 DNIART-------------SMIHGLC--------------------KEGRVDEAREIFDE 197
Query: 351 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
+ V++W ++++ YG N A +IF+ M + + +S+ ++L G +E+
Sbjct: 198 MSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEK----TEVSWTSMLMGYVQNGRIEDA 253
Query: 411 KILFESMLSKYRIHPGMEHYAC--MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
+ LFE M K I AC M+ LG+ + +A ++ + M E W +++
Sbjct: 254 EELFEVMPVKPVI-------ACNAMISGLGQKGEIAKARRVFDSMK-ERNDASWQTVI-- 303
Query: 469 CRIH 472
+IH
Sbjct: 304 -KIH 306
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 117/306 (38%), Gaps = 78/306 (25%)
Query: 213 ILRHGYEENIHVMTTLLDV--YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV 270
+LR Y I T + + ++ G I A +F + +K+ SW++M+ Y N MP
Sbjct: 6 LLRRTYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPR 65
Query: 271 KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINA 330
A +LF +M D + N
Sbjct: 66 DARKLFDEMP-----------------------------------------DRNIISWNG 84
Query: 331 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPS 390
L++ Y + GEI +VFD + +VVSW +L+ Y +NG + + E++ + +
Sbjct: 85 LVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNG----KVDVAESLFWKMPEKN 140
Query: 391 YISFITVLCACSHAGLVEEGKILFESMLSKYRI-HPGMEHYAC----------------- 432
+S+ +L G +++ L+E + K I M H C
Sbjct: 141 KVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSE 200
Query: 433 --------MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAM 484
MV G+ NR+D+A K+ + MP E W S+L + E AE
Sbjct: 201 RSVITWTTMVTGYGQNNRVDDARKIFDVMP-EKTEVSWTSMLMGYVQNGRIEDAEE---- 255
Query: 485 LFELEP 490
LFE+ P
Sbjct: 256 LFEVMP 261
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 266 bits (679), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/487 (31%), Positives = 251/487 (51%), Gaps = 14/487 (2%)
Query: 66 NHKQALEVL----WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLAT 121
+H+ AL + +S P T + +CA+ GR VH L GL++D ++
Sbjct: 112 DHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINH 171
Query: 122 KLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS 181
LI MY + G + ARK+FDE ER WN+ + G ++ ++L+R+M G
Sbjct: 172 SLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEP 231
Query: 182 DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 241
D T +L AC + L+ G+ + + + + + L+ +Y K G + A
Sbjct: 232 DERTLVSMLGACS----HLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSA 287
Query: 242 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 301
VF M K+ V+W+AMI Y++N +A +LF +M E P++ T+ +V
Sbjct: 288 RRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEM--EKTGVSPDAGTLSTVLSACG 345
Query: 302 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 361
+ L + V L+ MYG+CG + RVF+ + + +WN+
Sbjct: 346 SVGALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNA 405
Query: 362 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 421
+I+ Y + G+ K+A+ +F+ M V PS I+FI VL AC HAGLV +G F M S +
Sbjct: 406 MITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMF 462
Query: 422 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 481
+ P +EHY ++DLL RA LDEA + +E P +P + ++LG+C + + E+A
Sbjct: 463 GLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKA 522
Query: 482 SAMLFEL-EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIY 540
ML E+ E NAGNYV+ +++ A+ KMW + +R LM R + K PGCSWIE++ ++
Sbjct: 523 MRMLMEMKEAKNAGNYVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELM 582
Query: 541 SFVSSEE 547
F++ +
Sbjct: 583 EFLAGSD 589
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 141/306 (46%), Gaps = 21/306 (6%)
Query: 186 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF 245
+ ++LK C+ SV L ++I A +L H E+ L+ + G +Y++ +F
Sbjct: 40 FLFLLKKCI----SVNQL---RQIQAQMLLHSVEKP----NFLIPKAVELGDFNYSSFLF 88
Query: 246 RAMPAKNSVSWSAMIGCYAK--NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 303
N S++ MI ND AL L+ +M P+ T V
Sbjct: 89 SVTEEPNHYSFNYMIRGLTNTWNDHEA-ALSLYRRMKFSGLK--PDKFTYNFVFIACAKL 145
Query: 304 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 363
VH + + GL+ + + ++LI MY +CG++ ++FD++ D VSWNS+I
Sbjct: 146 EEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMI 205
Query: 364 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 423
S Y GY K A+ +F M +G P + +++L ACSH G + G++L E ++K +I
Sbjct: 206 SGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITK-KI 264
Query: 424 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 483
+ ++ + G+ LD A ++ M + W +++ ++ + A
Sbjct: 265 GLSTFLGSKLISMYGKCGDLDSARRVFNQM-IKKDRVAWTAMI---TVYSQNGKSSEAFK 320
Query: 484 MLFELE 489
+ FE+E
Sbjct: 321 LFFEME 326
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 263 bits (672), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 152/503 (30%), Positives = 249/503 (49%), Gaps = 34/503 (6%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T ++++C + + GR VH + S Y+ LI+MY ++ AR++
Sbjct: 142 PDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRL 201
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACV----- 194
FD ER WNA A G E EL+ +M +SG+ T+ + C+
Sbjct: 202 FDRMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNY 261
Query: 195 ------VSEFSVYP--------------------LQKGKEIHANILRHGYEENIHVMTTL 228
+S +P ++ GKEIH + Y+ +V TL
Sbjct: 262 VGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTL 321
Query: 229 LDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 288
+ +Y+K + +A VFR + +W+++I YA+ + +A L +M++ P
Sbjct: 322 ITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ--P 379
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERV 347
NS+T+ S+ H +ILRR + N+L+ +Y + G+I ++V
Sbjct: 380 NSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQV 439
Query: 348 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLV 407
D + D V++ SLI YGN G G A+ +F+ M G+ P +++ + VL ACSH+ LV
Sbjct: 440 SDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLV 499
Query: 408 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
EG+ LF M +Y I P ++H++CMVDL GRA L +A +I +MP++P W +LL
Sbjct: 500 HEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLN 559
Query: 468 SCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKV 527
+C IH N ++ + A+ L E++P N G YVL+A++YA A WS + VR +M ++K
Sbjct: 560 ACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKD 619
Query: 528 PGCSWIEVKKKIYSFVSSEEDNP 550
PGC+WI+ F + +P
Sbjct: 620 PGCAWIDTDSGFSLFSVGDTSSP 642
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 173/412 (41%), Gaps = 38/412 (9%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
L+ +C +F G VH + + SG++ L KL+ Y + A+ + + +
Sbjct: 49 LLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILH 108
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
WN + A EE++ Y++M GI D FTY VLKAC + G+
Sbjct: 109 PLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKAC----GETLDVAFGR 164
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
+H +I Y+ +++V L+ +Y +F + A +F M +++VSW+A+I CYA
Sbjct: 165 VVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEG 224
Query: 268 MPVKALELFHQMVLEACD------------------------------SIPNS---VTMV 294
M +A ELF +M + + P S V M+
Sbjct: 225 MWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMI 284
Query: 295 SVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNP 354
+HG + D I V N LITMY +C ++ VF + +
Sbjct: 285 IGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN 344
Query: 355 DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILF 414
+ +WNS+IS Y ++A + M+ G P+ I+ ++L C+ ++ GK
Sbjct: 345 SLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFH 404
Query: 415 ESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
+L + + +VD+ ++ ++ A K + D+ + + SL+
Sbjct: 405 CYILRRKCFKDYTMLWNSLVDVYAKSGKI-VAAKQVSDLMSKRDEVTYTSLI 455
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 176/408 (43%), Gaps = 59/408 (14%)
Query: 65 GNHKQALEVLWSERN--PSHKTIEVLI--QSCAQKSSFSDGRDVHRYLVDSGLDQDPYLA 120
GN+ AL ++ RN S + ++I ++C+ + G+++H + S D +
Sbjct: 259 GNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVR 318
Query: 121 TKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP 180
LI MY + L A VF +T E ++ WN+ A + + EE L R+M +G
Sbjct: 319 NTLITMYSKCKDLRHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQ 378
Query: 181 SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCIS 239
+ T +L C + LQ GKE H ILR +++ + +L+DVYAK G I
Sbjct: 379 PNSITLASILPLCA----RIANLQHGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIV 434
Query: 240 YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX 299
A V M ++ V+++++I Y AL LF +M P+ VT+V+V
Sbjct: 435 AAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIK--PDHVTVVAV--- 489
Query: 300 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-----NP 354
++ + GER+F K++ P
Sbjct: 490 --------------------------------LSACSHSKLVHEGERLFMKMQCEYGIRP 517
Query: 355 DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILF 414
+ ++ ++ +YG G+ KA I NM ++ PS ++ T+L AC G + GK
Sbjct: 518 CLQHFSCMVDLYGRAGFLAKAKDIIHNMPYK---PSGATWATLLNACHIHGNTQIGKWAA 574
Query: 415 ESMLSKYRIHPGMEHYACMVDLLGRA---NRLDEAIKLIEDMPFEPGP 459
E +L +PG +Y + ++ A ++L E ++ D+ + P
Sbjct: 575 EKLLEMKPENPG--YYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDP 620
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 151/471 (32%), Positives = 246/471 (52%), Gaps = 18/471 (3%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDC--ARKVFD 141
T L+++C+ +S + +H ++ GL D Y+ LI+ Y G L A K+F+
Sbjct: 119 TYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFE 178
Query: 142 ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVY 201
+ ER WN+ L G + L+ +M D ++ +L
Sbjct: 179 KMSERDTVSWNSMLGGLVKAGELRDARRLFDEMP----QRDLISWNTMLDGYA----RCR 230
Query: 202 PLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP--AKNSVSWSAM 259
+ K E+ + E N +T++ Y+K G + A +F MP AKN V+W+ +
Sbjct: 231 EMSKAFELFEKM----PERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTII 286
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I YA+ + +A L QMV ++ ++S+ +H + R
Sbjct: 287 IAGYAEKGLLKEADRLVDQMVASGLKF--DAAAVISILAACTESGLLSLGMRIHSILKRS 344
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
L S V+NAL+ MY +CG + VF+ + D+VSWN+++ G +G+GK+AI++F
Sbjct: 345 NLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELF 404
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 439
M +G+ P ++FI VLC+C+HAGL++EG F SM Y + P +EHY C+VDLLGR
Sbjct: 405 SRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGR 464
Query: 440 ANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLL 499
RL EAIK+++ MP EP +WG+LLG+CR+H ++A+ L +L+P + GNY LL
Sbjct: 465 VGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLL 524
Query: 500 ADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
++IYA A+ W V +R M ++K G S +E++ I+ F ++ +P
Sbjct: 525 SNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHP 575
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 187/407 (45%), Gaps = 30/407 (7%)
Query: 81 SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVF 140
S + E +Q + ++ + + +H ++ L +D ++A KLI+ + A +VF
Sbjct: 15 SRRIFEERLQDLPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVF 74
Query: 141 DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSV 200
++ +E +++ N+ RA A + + ++ +M G+ +D FTY ++LKAC S S
Sbjct: 75 NQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKAC--SGQSW 132
Query: 201 YPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY--ANSVFRAMPAKNSVSWSA 258
P+ K +H +I + G +I+V L+D Y++ G + A +F M +++VSW++
Sbjct: 133 LPVV--KMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNS 190
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
M+G K A LF D +P ++S +
Sbjct: 191 MLGGLVKAGELRDARRLF--------DEMPQR-DLISWNTMLDGYARCREMSKAFELFEK 241
Query: 319 RGLDSIMPVIN-----ALITMYGRCGEISIGERVFDKVKNP--DVVSWNSLISMYGNNGY 371
MP N ++ Y + G++ + +FDK+ P +VV+W +I+ Y G
Sbjct: 242 ------MPERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGL 295
Query: 372 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
K+A ++ + M+ G+ + I++L AC+ +GL+ G + S+L + +
Sbjct: 296 LKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLG-MRIHSILKRSNLGSNAYVLN 354
Query: 432 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
++D+ + L +A + D+P + W ++L +H + + A
Sbjct: 355 ALLDMYAKCGNLKKAFDVFNDIP-KKDLVSWNTMLHGLGVHGHGKEA 400
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 262 bits (670), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 139/455 (30%), Positives = 244/455 (53%), Gaps = 11/455 (2%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
G +H Y G++ D + T L++MY + GSL A K+F + + +NA
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 161 VGR-----GEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR 215
+ E +L+ M G+ T++ VLKAC ++ L+ G++IHA I +
Sbjct: 331 MDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAK----TLEYGRQIHALICK 386
Query: 216 HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALEL 275
+ ++ + + + L+++YA G F + ++ SW++MI C+ +N+ A +L
Sbjct: 387 NNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDL 446
Query: 276 FHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMY 335
F Q+ + P T+ + + G+ ++ G+D+ V + I+MY
Sbjct: 447 FRQLF--SSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMY 504
Query: 336 GRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 395
+ G + + +VF +V+NPDV +++++IS +G +A+ IFE+M G+ P+ +F+
Sbjct: 505 AKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFL 564
Query: 396 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPF 455
VL AC H GLV +G F+ M + YRI+P +H+ C+VDLLGR RL +A LI F
Sbjct: 565 GVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGF 624
Query: 456 EPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSV 515
+ P W +LL SCR++ ++ + +R + L ELEP +G+YVLL +IY ++ + S + V
Sbjct: 625 QDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEV 684
Query: 516 RKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
R+LM R ++K P SWI + + +SF ++ +P
Sbjct: 685 RELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHP 719
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 169/384 (44%), Gaps = 17/384 (4%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHK----TIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI + G ++QA+E+ R + K T + C ++ G +H +V +G
Sbjct: 119 LISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNG 178
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
L Q +L LI+MY + G LD A +FD ER WN+ VG EE L L
Sbjct: 179 LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLA 238
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+M+ G+ + VLKAC ++ + ++KG IH + G E +I V T LLD+Y
Sbjct: 239 KMHRDGLNLTTYALGSVLKACCINLNEGF-IEKGMAIHCYTAKLGMEFDIVVRTALLDMY 297
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND-----MPVKALELFHQMVLEACDSI 287
AK G + A +F MP+KN V+++AMI + + D +A +LF M +
Sbjct: 298 AKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPS 357
Query: 288 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 347
P++ ++ V +H I + S + +ALI +Y G G +
Sbjct: 358 PSTFSV--VLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 348 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLV 407
F D+ SW S+I + N + A +F + + P + ++ AC+ +
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475
Query: 408 EEGKILFESMLSKYRIHPGMEHYA 431
G+ + Y I G++ +
Sbjct: 476 SSGE-----QIQGYAIKSGIDAFT 494
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 163/332 (49%), Gaps = 10/332 (3%)
Query: 86 EVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRE 145
++L Q+ A+ S G+ H +++ S L+ YL L+NMY + L AR++FD E
Sbjct: 51 KILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPE 110
Query: 146 RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQK 205
R I +N+ +G E+ +EL+ + + + D+FTY L C L
Sbjct: 111 RNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCG----ERCDLDL 166
Query: 206 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 265
G+ +H ++ +G + + ++ L+D+Y+K G + A S+F ++ VSW+++I Y +
Sbjct: 167 GELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVR 226
Query: 266 NDMPVKALELFHQMVLEACDSIPNSV-TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI 324
+ L L +M + + ++ +++ +H + + G++
Sbjct: 227 VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFD 286
Query: 325 MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG-----NNGYGKKAIQIF 379
+ V AL+ MY + G + ++F + + +VV++N++IS + + +A ++F
Sbjct: 287 IVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLF 346
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
+M +G+ PS +F VL ACS A +E G+
Sbjct: 347 MDMQRRGLEPSPSTFSVVLKACSAAKTLEYGR 378
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 8/192 (4%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG 131
++ S P T+ +++ +CA ++ S G + Y + SG+D + T I+MY + G
Sbjct: 449 QLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSG 508
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
++ A +VF E + + ++A +LA G E L ++ M GI ++ + VL
Sbjct: 509 NMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLI 568
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHV--MTTLLDVYAKFGCISYA-NSVFRAM 248
AC L+ + +++ Y N + T L+D+ + G +S A N + +
Sbjct: 569 ACCHGGLVTQGLK-----YFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSG 623
Query: 249 PAKNSVSWSAMI 260
+ V+W A++
Sbjct: 624 FQDHPVTWRALL 635
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 371
HG +++ L+ + ++N L+ MY +C E+ ++FD++ +++S+NSLIS Y G+
Sbjct: 69 AHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGF 128
Query: 372 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
++A+++F + ++ L C ++ G++L ++ + +
Sbjct: 129 YEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELL-HGLVVVNGLSQQVFLIN 187
Query: 432 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
++D+ + +LD+A+ L D E W SL+
Sbjct: 188 VLIDMYSKCGKLDQAMSLF-DRCDERDQVSWNSLI 221
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 250/451 (55%), Gaps = 8/451 (1%)
Query: 102 RDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMV 161
+ +H ++ +G + L T+L+ +G + AR+VFDE + I++WN F+
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRN 87
Query: 162 GRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN 221
E L LY++M G+ D FTY +V+KA +S+ + G +HA+++++G+
Sbjct: 88 QLPFESLLLYKKMRDLGVRPDEFTYPFVVKA--ISQLGDFSC--GFALHAHVVKYGFGCL 143
Query: 222 IHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 281
V T L+ +Y KFG +S A +F +M K+ V+W+A + + ALE F++M
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 282 EACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI 341
+A +S T+VS+ ++ + +D + V NA + M+ +CG
Sbjct: 204 DAVQF--DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNT 261
Query: 342 SIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCAC 401
+F+++K +VVSW+++I Y NG ++A+ +F M ++G+ P+Y++F+ VL AC
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSAC 321
Query: 402 SHAGLVEEGKILFESML--SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 459
SHAGLV EGK F M+ + + P EHYACMVDLLGR+ L+EA + I+ MP EP
Sbjct: 322 SHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT 381
Query: 460 TVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 519
+WG+LLG+C +H + L ++ + +L E P +VLL++IYA A W V VR M
Sbjct: 382 GIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKM 441
Query: 520 GKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
K +KV S +E + KI+ F ++ +P
Sbjct: 442 RKLGTKKVAAYSSVEFEGKIHFFNRGDKSHP 472
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 120/288 (41%), Gaps = 10/288 (3%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T ++++ +Q FS G +H ++V G +AT+L+ MY + G L A +
Sbjct: 107 PDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFL 166
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F+ + + + WNAF G LE + +M + D FT +L AC
Sbjct: 167 FESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACG----Q 222
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
+ L+ G+EI+ + + NI V LD++ K G A +F M +N VSWS M
Sbjct: 223 LGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTM 282
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I YA N +AL LF M E PN VT + V +++
Sbjct: 283 IVGYAMNGDSREALTLFTTMQNEGLR--PNYVTFLGVLSACSHAGLVNEGKRYFSLMVQS 340
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLI 363
++ P M G + E ++ +K PD W +L+
Sbjct: 341 NDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALL 388
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 144/473 (30%), Positives = 254/473 (53%), Gaps = 15/473 (3%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG 131
E+L +P + T ++++C+ G VH ++V +G + + Y++T L++MY G
Sbjct: 97 EMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCG 156
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
++ +VF++ + + W + R + +E +R+M +G+ ++ +L
Sbjct: 157 EVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLV 216
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEE--------NIHVMTTLLDVYAKFGCISYANS 243
AC + + GK H + G++ N+ + T+L+D+YAK G + A
Sbjct: 217 ACGRCK----DIVTGKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARY 272
Query: 244 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 303
+F MP + VSW+++I Y++N +AL +F M+ P+ VT +SV
Sbjct: 273 LFDGMPERTLVSWNSIITGYSQNGDAEEALCMFLDML--DLGIAPDKVTFLSVIRASMIQ 330
Query: 304 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 363
+H ++ + G ++ AL+ MY + G+ ++ F+ ++ D ++W +I
Sbjct: 331 GCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVI 390
Query: 364 SMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 422
++G+G +A+ IF+ M +G +P I+++ VL ACSH GLVEEG+ F M +
Sbjct: 391 IGLASHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHG 450
Query: 423 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 482
+ P +EHY CMVD+L RA R +EA +L++ MP +P +WG+LL C IH N EL +R
Sbjct: 451 LEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIHENLELTDRIR 510
Query: 483 AMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV 535
+M+ E E +G YVLL++IYA+A W+DVK +R+ M + + KV G S +E
Sbjct: 511 SMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVET 563
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 181/383 (47%), Gaps = 21/383 (5%)
Query: 82 HKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYH---ELGSLDCARK 138
+K I +++C S + +H ++ S + ++ ++LI+ E +L AR
Sbjct: 6 YKPILSQLENC---RSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARS 62
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
VF+ ++YIWN+ R + ++ L Y++M G D FT+ YVLKAC
Sbjct: 63 VFESIDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACS---- 118
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
+ +Q G +H +++ G+E N++V T LL +Y G ++Y VF +P N V+W +
Sbjct: 119 GLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGS 178
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
+I + N+ A+E F +M + N MV + HGF+
Sbjct: 179 LISGFVNNNRFSDAIEAFREMQSNGVKA--NETIMVDLLVACGRCKDIVTGKWFHGFLQG 236
Query: 319 RGLDSIMP--------VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 370
G D + +LI MY +CG++ +FD + +VSWNS+I+ Y NG
Sbjct: 237 LGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNG 296
Query: 371 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 430
++A+ +F +M+ G++P ++F++V+ A G + G+ + + +SK
Sbjct: 297 DAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSI-HAYVSKTGFVKDAAIV 355
Query: 431 ACMVDLLGRANRLDEAIKLIEDM 453
+V++ + + A K ED+
Sbjct: 356 CALVNMYAKTGDAESAKKAFEDL 378
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 13/162 (8%)
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGE---ISIGERVFDKVKNPDVVSWNSLISMYGN 368
+HG +++ + + ++ LI C E +S VF+ + P V WNS+I Y N
Sbjct: 25 LHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESIDCPSVYIWNSMIRGYSN 84
Query: 369 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 428
+ KA+ ++ M+ +G SP Y +F VL ACS GL + I F S + + + G E
Sbjct: 85 SPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACS--GLRD---IQFGSCVHGFVVKTGFE 139
Query: 429 ----HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
C++ + ++ +++ ED+P + WGSL+
Sbjct: 140 VNMYVSTCLLHMYMCCGEVNYGLRVFEDIP-QWNVVAWGSLI 180
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 149/485 (30%), Positives = 258/485 (53%), Gaps = 26/485 (5%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I S + G H +A+ +++ P+ T+ ++Q CA ++ G+ +H Y + +
Sbjct: 372 MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD 431
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
++ + AT +I+MY + G A K F+ + +NA + +G + ++Y+
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYK 491
Query: 173 QMNWSGIPSDRFTYTYVLKACVV-SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
M G+ D T +L+ C S+++ +G ++ I++HG++ HV L+++
Sbjct: 492 NMKLHGVCPDSRTMVGMLQTCAFCSDYA-----RGSCVYGQIIKHGFDSECHVAHALINM 546
Query: 232 YAKFGCISYANSVF-RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
+ K ++ A +F + K++VSW+ M+ Y + +A+ F QM +E PN+
Sbjct: 547 FTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQ--PNA 604
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK 350
VT V++ VH +++ G S PV N+L+ MY +CG I E+ F +
Sbjct: 605 VTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIE 664
Query: 351 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
+ N +VSWN+++S Y +G A+ +F +M + P +SF++VL AC HAGLVEEG
Sbjct: 665 ISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEG 724
Query: 411 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCR 470
K +FE M +++I +EHYACMVDLLG+A EA++++ M + VWG+LL S R
Sbjct: 725 KRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSR 784
Query: 471 IHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGC 530
+HCN L+ A L +LEP N + Y++ + +V +V + ++KVP C
Sbjct: 785 MHCNLWLSNAALCQLVKLEPLNPSH-------YSQDRRLGEVNNVSR------IKKVPAC 831
Query: 531 SWIEV 535
SWIEV
Sbjct: 832 SWIEV 836
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 187/411 (45%), Gaps = 22/411 (5%)
Query: 57 LIQSLCRGGNHKQALEVL--WSER---NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
+I+ R G H++AL SE +P + +++CA F G +H + +
Sbjct: 70 MIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEM 129
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
GL+ D Y+ T L+ MY + L AR+VFD+ + + WN LA G L L+
Sbjct: 130 GLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLF 189
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG---KEIHANILRHGYEENIHVMTT- 227
M + D + ++ A V L+K + +H +++ G+ I ++
Sbjct: 190 HDMRSCCVDIDHVSLYNLIPA-------VSKLEKSDVCRCLHGLVIKKGF---IFAFSSG 239
Query: 228 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 287
L+D+Y + A SVF + K+ SW M+ YA N + LELF M D
Sbjct: 240 LIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLM--RNYDVR 297
Query: 288 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 347
N V S +H + +++GL + V +L++MY +CGE+ I E++
Sbjct: 298 MNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQL 357
Query: 348 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLV 407
F +++ DVVSW+++I+ Y G +AI +F +M+ + P+ ++ +VL C+
Sbjct: 358 FINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAAS 417
Query: 408 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPG 458
GK + + K I +E ++ + + R A+K E +P +
Sbjct: 418 RLGKSIHCYAI-KADIESELETATAVISMYAKCGRFSPALKAFERLPIKDA 467
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/434 (26%), Positives = 195/434 (44%), Gaps = 60/434 (13%)
Query: 104 VHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGR 163
VH L+ SGL P+ +LIN Y D +R +FD R+ + +WN+ R G
Sbjct: 24 VHGSLIVSGLK--PH--NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGL 79
Query: 164 GEELLELYRQMN-WSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENI 222
E L + M+ GI D++++T+ LKAC S +KG IH I G E ++
Sbjct: 80 HREALGFFGYMSEEKGIDPDKYSFTFALKACAGS----MDFKKGLRIHDLIAEMGLESDV 135
Query: 223 HVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLE 282
++ T L+++Y K + A VF M K+ V+W+ M+ A+N AL LFH M
Sbjct: 136 YIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDM--R 193
Query: 283 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 342
+C + V++ ++ +HG ++++G I + LI MY C ++
Sbjct: 194 SCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLY 251
Query: 343 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
E VF++V D SW ++++ Y +NG+ ++ +++F+ M + V + ++ + L A +
Sbjct: 252 AAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAA 311
Query: 403 HAG-----------LVEEGKI----LFESMLSKYRIHPGME---------------HYAC 432
+ G V++G I + S++S Y +E ++
Sbjct: 312 YVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSA 371
Query: 433 MVDLLGRANRLDEAIKLIEDM---PFEPGPTVWGSLLGSC----------RIHCNAELAE 479
M+ +A + DEAI L DM +P S+L C IHC A A+
Sbjct: 372 MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD 431
Query: 480 RASAMLFELEPWNA 493
S ELE A
Sbjct: 432 IES----ELETATA 441
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 261 bits (666), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 147/480 (30%), Positives = 246/480 (51%), Gaps = 8/480 (1%)
Query: 71 LEVLWSERNPSHKTI-EVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHE 129
+++L P T+ VL + + S + VH + + D +++T LI+ Y
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSR 464
Query: 130 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 189
+ A +F E + WNA G + L+L+ M+ G SD FT V
Sbjct: 465 NRCMKEAEILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATV 523
Query: 190 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
K C ++ + +GK++HA ++ GY+ ++ V + +LD+Y K G +S A F ++P
Sbjct: 524 FKTCGF----LFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIP 579
Query: 250 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 309
+ V+W+ MI +N +A +F QM L +P+ T+ ++
Sbjct: 580 VPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGV--LPDEFTIATLAKASSCLTALEQG 637
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 369
+H L+ + V +L+ MY +CG I +F +++ ++ +WN+++ +
Sbjct: 638 RQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQH 697
Query: 370 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
G GK+ +Q+F+ M G+ P ++FI VL ACSH+GLV E SM Y I P +EH
Sbjct: 698 GEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEH 757
Query: 430 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
Y+C+ D LGRA + +A LIE M E +++ +LL +CR+ + E +R + L ELE
Sbjct: 758 YSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELE 817
Query: 490 PWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDN 549
P ++ YVLL+++YA A W ++K R +M ++K PG SWIEVK KI+ FV + N
Sbjct: 818 PLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSN 877
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 180/397 (45%), Gaps = 36/397 (9%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T +++ + + S + G+ VH + GLD ++ LINMY +L AR VFD
Sbjct: 317 TFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNM 376
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYP- 202
ER + WN+ +A G E + L+ Q+ G+ D++T T VLKA S P
Sbjct: 377 SERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAA-----SSLPE 431
Query: 203 -LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 261
L K++H + ++ + V T L+D Y++ C+ A +F + V+W+AM+
Sbjct: 432 GLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMA 490
Query: 262 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 321
Y ++ K L+LF M + S + T+ +V VH + ++ G
Sbjct: 491 GYTQSHDGHKTLKLFALMHKQGERS--DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGY 548
Query: 322 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFEN 381
D + V + ++ MY +CG++S + FD + PD V+W ++IS NG ++A +F
Sbjct: 549 DLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQ 608
Query: 382 MIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC--------- 432
M GV P + T+ A S +E+G+ +IH C
Sbjct: 609 MRLMGVLPDEFTIATLAKASSCLTALEQGR----------QIHANALKLNCTNDPFVGTS 658
Query: 433 MVDLLGRANRLDEA---IKLIEDMPFEPGPTVWGSLL 466
+VD+ + +D+A K IE M T W ++L
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNI----TAWNAML 691
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 146/365 (40%), Gaps = 42/365 (11%)
Query: 42 PVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSS 97
P +D+ S S C N +QA + R S T+ +++ C
Sbjct: 101 PDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY 160
Query: 98 FSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRA 157
H Y GLD D ++A L+N+Y + G + + +F+E R + +WN +A
Sbjct: 161 VWASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 158 LAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG 217
+G EE ++L + SG+ + T + + G + A ++
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARI------------SGDDSDAGQVKSF 268
Query: 218 YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFH 277
N + + ++ G Y +S +SA++ C+A DM +E
Sbjct: 269 ANGNDASSVSEI-IFRNKGLSEYLHSG----------QYSALLKCFA--DMVESDVE--- 312
Query: 278 QMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR 337
CD VT + + VH L+ GLD ++ V N+LI MY +
Sbjct: 313 ------CDQ----VTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCK 362
Query: 338 CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
+ VFD + D++SWNS+I+ NG +A+ +F ++ G+ P + +V
Sbjct: 363 LRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSV 422
Query: 398 LCACS 402
L A S
Sbjct: 423 LKAAS 427
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 9/236 (3%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I G ++A V R P TI L ++ + ++ GR +H +
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
DP++ T L++MY + GS+D A +F I WNA LA G G+E L+L++
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
QM GI D+ T+ VL AC S + + +H + +G + I + L D
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGD---YGIKPEIEHYSCLADAL 765
Query: 233 AKFGCISYANSVFRAMPAKNSVSW--SAMIGCYAKNDMPVKALELFHQMVLEACDS 286
+ G + A ++ +M + S S + + C + D + LE DS
Sbjct: 766 GRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDS 821
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 203 LQKGKEIHANILRHGYEENIH--VMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI 260
L GK HA IL +EEN ++ L+ +Y+K G ++YA VF MP ++ VSW++++
Sbjct: 55 LMLGKCTHARILT--FEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 261 GCYAKNDMPV-----KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 315
YA++ V +A LF +L + +T+ + HG+
Sbjct: 113 AAYAQSSECVVENIQQAFLLFR--ILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGY 170
Query: 316 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 375
+ GLD V AL+ +Y + G++ G+ +F+++ DVV WN ++ Y G+ ++A
Sbjct: 171 ACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEA 230
Query: 376 IQIFENMIHQGVSPSYISF 394
I + G++P+ I+
Sbjct: 231 IDLSSAFHSSGLNPNEITL 249
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 17/201 (8%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALA- 159
G+ H ++ + + +L LI+MY + GSL AR+VFD+ +R + WN+ A A
Sbjct: 58 GKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQ 117
Query: 160 ----MVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR 215
+V ++ L+R + + + R T + +LK C+ S + + + H +
Sbjct: 118 SSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGY----VWASESFHGYACK 173
Query: 216 HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALEL 275
G + + V L+++Y KFG + +F MP ++ V W+ M+ Y + +A++L
Sbjct: 174 IGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
Query: 276 ---FHQMVLEACDSIPNSVTM 293
FH L PN +T+
Sbjct: 234 SSAFHSSGLN-----PNEITL 249
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 327 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG-----KKAIQIFEN 381
+IN LI+MY +CG ++ RVFDK+ + D+VSWNS+++ Y + ++A +F
Sbjct: 76 LINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLLFRI 135
Query: 382 MIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRAN 441
+ V S ++ +L C H+G V + F K + +V++ +
Sbjct: 136 LRQDVVYTSRMTLSPMLKLCLHSGYVWASES-FHGYACKIGLDGDEFVAGALVNIYLKFG 194
Query: 442 RLDEAIKLIEDMPFEPGPTVWGSLL 466
++ E L E+MP+ +W +L
Sbjct: 195 KVKEGKVLFEEMPYRD-VVLWNLML 218
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 155/498 (31%), Positives = 259/498 (52%), Gaps = 47/498 (9%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGS-------LDCARKVF 140
L+QSC SSFSD + +H +L+ + L D ++A++L+ + + + L A +F
Sbjct: 18 LLQSC---SSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIF 74
Query: 141 DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSV 200
+ + ++++N R + + Y QM S I D T+ +++KA E +
Sbjct: 75 SQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVL 134
Query: 201 YPLQKGKEIHANILRHGYEENIHVMTTLLDVYA--------------------------- 233
G++ H+ I+R G++ +++V +L+ +YA
Sbjct: 135 V----GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 234 ----KFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPN 289
K G + A +F MP +N +WS MI YAKN+ KA++LF M E + N
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV--VAN 248
Query: 290 SVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFD 349
MVSV + ++++ + + + AL+ M+ RCG+I VF+
Sbjct: 249 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE 308
Query: 350 KVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE 409
+ D +SW+S+I +G+ KA+ F MI G P ++F VL ACSH GLVE+
Sbjct: 309 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEK 368
Query: 410 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
G ++E+M + I P +EHY C+VD+LGRA +L EA I M +P + G+LLG+C
Sbjct: 369 GLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGAC 428
Query: 470 RIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPG 529
+I+ N E+AER ML +++P ++G YVLL++IYA A W ++S+R +M +++++K PG
Sbjct: 429 KIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPG 488
Query: 530 CSWIEVKKKIYSFVSSEE 547
S IE+ KI F ++
Sbjct: 489 WSLIEIDGKINKFTMGDD 506
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/394 (21%), Positives = 153/394 (38%), Gaps = 74/394 (18%)
Query: 15 FQTHLCYTSHVSSRLPVCFVSINPSANPVK----------DIKSXXXXXXXQLIQSLCRG 64
+THL V+SRL V + P I++ LI+ G
Sbjct: 36 LRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLFVFNLLIRCFSTG 95
Query: 65 GNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLA 120
+A ++L S P + T LI++ ++ G H +V G D Y+
Sbjct: 96 AEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQNDVYVE 155
Query: 121 TKLINMYH-------------------------------ELGSLDCARKVFDETRERTIY 149
L++MY + G ++ AR++FDE R ++
Sbjct: 156 NSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLF 215
Query: 150 IWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEI 209
W+ A E+ ++L+ M G+ ++ V+ +C + L+ G+
Sbjct: 216 TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCA----HLGALEFGERA 271
Query: 210 HANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMP 269
+ +++ N+ + T L+D++ + G I A VF +P +S+SWS++I A +
Sbjct: 272 YEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHA 331
Query: 270 VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD------- 322
KA+ F QM+ + IP VT +V HG ++ +GL+
Sbjct: 332 HKAMHYFSQMI--SLGFIPRDVTFTAVLSACS-----------HGGLVEKGLEIYENMKK 378
Query: 323 --SIMPVI---NALITMYGRCGEISIGERVFDKV 351
I P + ++ M GR G+++ E K+
Sbjct: 379 DHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM 412
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/482 (31%), Positives = 246/482 (51%), Gaps = 9/482 (1%)
Query: 65 GNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLA 120
GN + L++L+ R P +T + GR +H +V +G D D +L
Sbjct: 224 GNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLK 283
Query: 121 TKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP 180
T LI MY + G + + +V + + + W L +GR E+ L ++ +M SG
Sbjct: 284 TALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSD 343
Query: 181 SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY 240
V+ +C ++ + L G +H +LRHGY + + +L+ +YAK G +
Sbjct: 344 LSSEAIASVVASC--AQLGSFDL--GASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDK 399
Query: 241 ANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXX 300
+ +F M ++ VSW+A+I YA+N KAL LF +M + + +S T+VS+
Sbjct: 400 SLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQV-DSFTVVSLLQAC 458
Query: 301 XXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWN 360
+H ++R + V AL+ MY +CG + +R FD + DVVSW
Sbjct: 459 SSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWG 518
Query: 361 SLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 420
LI+ YG +G G A++I+ +H G+ P+++ F+ VL +CSH G+V++G +F SM+
Sbjct: 519 ILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRD 578
Query: 421 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 480
+ + P EH AC+VDLL RA R+++A K ++ P V G +L +CR + E+ +
Sbjct: 579 FGVEPNHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDI 638
Query: 481 ASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIY 540
+ EL+P +AG+YV L +A K W DV M L+K+PG S IE+ K
Sbjct: 639 ICEDMIELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTT 698
Query: 541 SF 542
+F
Sbjct: 699 TF 700
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 192/415 (46%), Gaps = 19/415 (4%)
Query: 58 IQSLCRGGNHKQALE----VLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGL 113
I L G+HKQ L +L ++ P T L+++CA S G +H+ ++ +G
Sbjct: 18 INHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGF 77
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQ 173
D Y+++ L+N+Y + G L ARKVF+E RER + W A + G E L +
Sbjct: 78 SSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNE 137
Query: 174 MNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYA 233
M + GI T +L V + + + +H + +G++ +I VM ++L++Y
Sbjct: 138 MRFQGIKPGPVTLLEMLSG-------VLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYC 190
Query: 234 KFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTM 293
K + A +F M ++ VSW+ MI YA + L+L ++M + P+ T
Sbjct: 191 KCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLR--PDQQTF 248
Query: 294 VSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN 353
+ +H I++ G D M + ALITMY +CG+ RV + + N
Sbjct: 249 GASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPN 308
Query: 354 PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKIL 413
DVV W +IS G +KA+ +F M+ G S + +V+ +C+ G + G +
Sbjct: 309 KDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASV 368
Query: 414 FESMLSK-YRIH-PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
+L Y + P + ++ + + LD+++ + E M E W +++
Sbjct: 369 HGYVLRHGYTLDTPALNS---LITMYAKCGHLDKSLVIFERMN-ERDLVSWNAII 419
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 153/304 (50%), Gaps = 10/304 (3%)
Query: 151 WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIH 210
+N+ L+ G +++L + M + + D FT+ +LKAC S+ L G IH
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACA----SLQRLSFGLSIH 69
Query: 211 ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV 270
+L +G+ + ++ ++L+++YAKFG +++A VF M ++ V W+AMIGCY++ +
Sbjct: 70 QQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVG 129
Query: 271 KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINA 330
+A L ++M + P VT++ + +H F + G D + V+N+
Sbjct: 130 EACSLVNEMRFQGIK--PGPVTLLEM---LSGVLEITQLQCLHDFAVIYGFDCDIAVMNS 184
Query: 331 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPS 390
++ +Y +C + + +FD+++ D+VSWN++IS Y + G + +++ M G+ P
Sbjct: 185 MLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPD 244
Query: 391 YISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 450
+F L +E G++L + K M ++ + + + + + +++
Sbjct: 245 QQTFGASLSVSGTMCDLEMGRML-HCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVL 303
Query: 451 EDMP 454
E +P
Sbjct: 304 ETIP 307
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 146/434 (33%), Positives = 226/434 (52%), Gaps = 8/434 (1%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
G+ VH Y + SGL D + + L +Y + GSL+ + K+F + W +
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYP-LQKGKEIHANILRHGYE 219
G E + L+ +M G D T VL C S +P L +GKEIH LR G +
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVC-----SSHPSLPRGKEIHGYTLRAGID 583
Query: 220 ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM 279
+ + + + L+++Y+K G + A V+ +P + VS S++I Y+++ + LF M
Sbjct: 584 KGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDM 643
Query: 280 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 339
V+ +S + S+ VH +I + GL + V ++L+TMY + G
Sbjct: 644 VMSGF--TMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFG 701
Query: 340 EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
I + F ++ PD+++W +LI+ Y +G +A+Q++ M +G P ++F+ VL
Sbjct: 702 SIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLS 761
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 459
ACSH GLVEE SM+ Y I P HY CMVD LGR+ RL EA I +M +P
Sbjct: 762 ACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKPDA 821
Query: 460 TVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 519
VWG+LL +C+IH EL + A+ ELEP +AG Y+ L++I AE W +V+ RKLM
Sbjct: 822 LVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRKLM 881
Query: 520 GKRVLQKVPGCSWI 533
+QK PG S +
Sbjct: 882 KGTGVQKEPGWSSV 895
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 174/349 (49%), Gaps = 19/349 (5%)
Query: 70 ALEVLWSERNP----SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLIN 125
ALE+ R+ ++ T+ +I +C + S + VH ++ SG D +A LI+
Sbjct: 335 ALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALIS 394
Query: 126 MYHELGSLDCARKVFDETRE-RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRF 184
MY + G +D + +VF++ + + I N + + + + + L+ +M G+ +D F
Sbjct: 395 MYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEF 454
Query: 185 TYTYVLKACVVSEFSVYP-LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 243
+ V S SV L GK++H L+ G ++ V ++L +Y+K G + +
Sbjct: 455 S--------VCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYK 506
Query: 244 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 303
+F+ +P K++ W++MI + + +A+ LF +M+ + + P+ T+ +V
Sbjct: 507 LFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDG--TSPDESTLAAVLTVCSSH 564
Query: 304 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 363
+HG+ LR G+D M + +AL+ MY +CG + + +V+D++ D VS +SLI
Sbjct: 565 PSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLI 624
Query: 364 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 412
S Y +G + +F +M+ G + + ++L A A L +E +
Sbjct: 625 SGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKA---AALSDESSL 670
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 175/397 (44%), Gaps = 45/397 (11%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG 131
E+L +P T+ ++ C+ S G+++H Y + +G+D+ L + L+NMY + G
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCG 600
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
SL AR+V+D E ++ + G ++ L+R M SG D F + +LK
Sbjct: 601 SLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILK 660
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 251
A +S+ S G ++HA I + G V ++LL +Y+KFG I F +
Sbjct: 661 AAALSDES----SLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGP 716
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
+ ++W+A+I YA++ +AL++++ M + P+ VT V V
Sbjct: 717 DLIAWTALIASYAQHGKANEALQVYNLMKEKGFK--PDKVTFVGVLSACS---------- 764
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 371
HG ++ +N+++ YG P+ + ++ G +G
Sbjct: 765 -HGGLVEESYFH----LNSMVKDYG---------------IEPENRHYVCMVDALGRSGR 804
Query: 372 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
++A NM + P + + T+L AC G VE GK+ + + G Y
Sbjct: 805 LREAESFINNM---HIKPDALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGA--YI 859
Query: 432 CMVDLL---GRANRLDEAIKLIEDMPFEPGPTVWGSL 465
+ ++L G + ++E KL++ + P W S+
Sbjct: 860 SLSNILAEVGEWDEVEETRKLMKGTGVQKEPG-WSSV 895
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 156/350 (44%), Gaps = 12/350 (3%)
Query: 104 VHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGR 163
+ RYL L D +L L++ Y GS+ A K+FD + + N
Sbjct: 75 LRRYL----LPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRL 130
Query: 164 GEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIH 223
EE L + +M++ G ++ +Y V+ AC + ++ + + + ++ GY
Sbjct: 131 FEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFS----ELVCCHTIKMGYFFYEV 186
Query: 224 VMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
V + L+DV++K A VFR + N W+ +I +N +LFH+M +
Sbjct: 187 VESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGF 246
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
P+S T SV V +++ G + + V A++ +Y +CG ++
Sbjct: 247 --QKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDVF-VCTAIVDLYAKCGHMAE 303
Query: 344 GERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSH 403
VF ++ NP VVSW ++S Y + A++IF+ M H GV + + +V+ AC
Sbjct: 304 AMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGR 363
Query: 404 AGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
+V E + + + K + A ++ + ++ +D + ++ ED+
Sbjct: 364 PSMVCEASQV-HAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDL 412
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 153/483 (31%), Positives = 253/483 (52%), Gaps = 44/483 (9%)
Query: 102 RDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMV 161
+ +H + + +G+D+ L +L+ + +L ARK+FD + +++N +A +
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLL----LIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 162 GRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN 221
+ E + LY +++ G+ T+ ++ A S S PL + +H+ R G+E +
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAA-SASFSSARPL---RLLHSQFFRSGFESD 116
Query: 222 IHVMTTLLDVYAKFGCISYANSVFR-------------------------------AMPA 250
TTL+ YAK G + A VF +MP
Sbjct: 117 SFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPR 176
Query: 251 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXX 309
KN SW+ +I +++N +AL++F + +E S+ PN +T+VSV
Sbjct: 177 KNVTSWTTVISGFSQNGNYSEALKMF--LCMEKDKSVKPNHITVVSVLPACANLGELEIG 234
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNP-DVVSWNSLISMYGN 368
+ G+ G + V NA I MY +CG I + +R+F+++ N ++ SWNS+I
Sbjct: 235 RRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLAT 294
Query: 369 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 428
+G +A+ +F M+ +G P ++F+ +L AC H G+V +G+ LF+SM ++I P +E
Sbjct: 295 HGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLE 354
Query: 429 HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFEL 488
HY CM+DLLGR +L EA LI+ MP +P VWG+LLG+C H N E+AE AS LF+L
Sbjct: 355 HYGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKL 414
Query: 489 EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSW-IEVKKKIYSFVSSEE 547
EP N GN V++++IYA + W V +RKLM K + K G S+ +EV ++ F ++
Sbjct: 415 EPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDK 474
Query: 548 DNP 550
+P
Sbjct: 475 SHP 477
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 162/381 (42%), Gaps = 74/381 (19%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
PSH T + + A SS R +H SG + D + T LI Y +LG+L CAR+V
Sbjct: 80 PSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRV 139
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSGIP---SDRFTYTYVL 190
FDE +R + +WNA G + +EL+ M +W+ + S Y+ L
Sbjct: 140 FDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEAL 199
Query: 191 KA--CVVSEFSVYP-----------------LQKGKEIHANILRHGYEENIHVMTTLLDV 231
K C+ + SV P L+ G+ + +G+ +NI+V +++
Sbjct: 200 KMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEM 259
Query: 232 YAKFGCISYANSVFRAMP-AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
Y+K G I A +F + +N SW++MIG A + +AL LF QM+ E P++
Sbjct: 260 YSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREG--EKPDA 317
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK 350
VT V + VHG G + G+ +F
Sbjct: 318 VTFVGL-----------LLACVHG------------------------GMVVKGQELFKS 342
Query: 351 VK-----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 405
++ +P + + +I + G G ++A + + M + P + + T+L ACS G
Sbjct: 343 MEEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTM---PMKPDAVVWGTLLGACSFHG 399
Query: 406 LVEEGKILFESMLSKYRIHPG 426
VE +I E++ +PG
Sbjct: 400 NVEIAEIASEALFKLEPTNPG 420
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 127/346 (36%), Positives = 216/346 (62%), Gaps = 3/346 (0%)
Query: 206 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 265
G+ IH+ ++R G+ I+V +LL +YA G ++ A VF MP K+ V+W+++I +A+
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 266 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 325
N P +AL L+ +M + P+ T+VS+ VH ++++ GL +
Sbjct: 67 NGKPEEALALYTEMNSKGIK--PDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNL 124
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM-IH 384
N L+ +Y RCG + + +FD++ + + VSW SLI NG+GK+AI++F+ M
Sbjct: 125 HSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMEST 184
Query: 385 QGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLD 444
+G+ P I+F+ +L ACSH G+V+EG F M +Y+I P +EH+ CMVDLL RA ++
Sbjct: 185 EGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 445 EAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYA 504
+A + I+ MP +P +W +LLG+C +H +++LAE A + +LEP ++G+YVLL+++YA
Sbjct: 245 KAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYA 304
Query: 505 EAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
+ WSDV+ +RK M + ++KVPG S +EV +++ F+ ++ +P
Sbjct: 305 SEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHP 350
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 146/301 (48%), Gaps = 41/301 (13%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
G +H ++ SG Y+ L+++Y G + A KVFD+ E+ + WN+ A
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 220
G+ EE L LY +MN GI D FT +L AC + L GK +H +++ G
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACA----KIGALTLGKRVHVYMIKVGLTR 122
Query: 221 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
N+H LLD+YA+ G + A ++F M KNSVSW+++I A N +A+ELF M
Sbjct: 123 NLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM- 181
Query: 281 LEACDS-IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD---------SIMPVI-- 328
E+ + +P +T V + H +++ G + I P I
Sbjct: 182 -ESTEGLLPCEITFVGILYACS-----------HCGMVKEGFEYFRRMREEYKIEPRIEH 229
Query: 329 -NALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLI---SMYGNNGYGKKA-IQIF 379
++ + R G++ ++ ++ +K+ P+VV W +L+ +++G++ + A IQI
Sbjct: 230 FGCMVDLLARAGQV---KKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQIL 286
Query: 380 E 380
+
Sbjct: 287 Q 287
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 112/238 (47%), Gaps = 20/238 (8%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN-----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
+I G ++AL L++E N P TI L+ +CA+ + + G+ VH Y++
Sbjct: 60 VINGFAENGKPEEAL-ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 118
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
GL ++ + + L+++Y G ++ A+ +FDE ++ W + LA+ G G+E +EL+
Sbjct: 119 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 178
Query: 172 RQMNWS-GIPSDRFTYTYVLKAC----VVSEFSVYPLQKGKEIHANILRHGYEENIHVMT 226
+ M + G+ T+ +L AC +V E Y + +E + E I
Sbjct: 179 KYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREE-------YKIEPRIEHFG 231
Query: 227 TLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIG-CYAKNDMPVKALELFHQMVLE 282
++D+ A+ G + A ++MP + N V W ++G C D + + LE
Sbjct: 232 CMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLE 289
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 134/419 (31%), Positives = 233/419 (55%), Gaps = 5/419 (1%)
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
S++ A +F + + +N R V EE L Y +M G D FTY +LK
Sbjct: 81 SMNYAASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 251
AC + +++GK+IH + + G E ++ V +L+++Y + G + +++VF + +K
Sbjct: 141 ACT----RLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESK 196
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
+ SWS+M+ A M + L LF M E S MVS
Sbjct: 197 TAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEES-GMVSALLACANTGALNLGMS 255
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 371
+HGF+LR + + V +L+ MY +CG + +F K++ + ++++++IS +G
Sbjct: 256 IHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGE 315
Query: 372 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
G+ A+++F MI +G+ P ++ +++VL ACSH+GLV+EG+ +F ML + ++ P EHY
Sbjct: 316 GESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYG 375
Query: 432 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPW 491
C+VDLLGRA L+EA++ I+ +P E +W + L CR+ N EL + A+ L +L
Sbjct: 376 CLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSH 435
Query: 492 NAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
N G+Y+L++++Y++ +MW DV R + + L++ PG S +E+K K + FVS + +P
Sbjct: 436 NPGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHP 494
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 140/297 (47%), Gaps = 11/297 (3%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG 131
E++ P + T L+++C + S +G+ +H + GL+ D ++ LINMY G
Sbjct: 122 EMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCG 181
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRFTYTYVL 190
++ + VF++ +T W++ A A +G E L L+R M + + + ++ L
Sbjct: 182 EMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSAL 241
Query: 191 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 250
AC + L G IH +LR+ E NI V T+L+D+Y K GC+ A +F+ M
Sbjct: 242 LACA----NTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEK 297
Query: 251 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 310
+N++++SAMI A + AL +F +M+ E + P+ V VSV
Sbjct: 298 RNNLTYSAMISGLALHGEGESALRMFSKMIKEGLE--PDHVVYVSVLNACSHSGLVKEGR 355
Query: 311 XVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDK--VKNPDVVSWNSLIS 364
V +L+ G ++ L+ + GR G + ++ DV+ W + +S
Sbjct: 356 RVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDVI-WRTFLS 411
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 259 bits (661), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 161/528 (30%), Positives = 261/528 (49%), Gaps = 68/528 (12%)
Query: 85 IEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETR 144
+ +++++C F R H ++ GL ++ ++ +L+ +Y + G + A +F E
Sbjct: 161 LPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMP 220
Query: 145 ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA------------ 192
R WN + + E ++++ M D T+T VL
Sbjct: 221 VRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLK 280
Query: 193 ----------CVVSE-----FSV----YPLQKGKEIHANILRHGYEENIHVMTTLLDVYA 233
V E FSV L +++H +++ G+EE + L+ VY
Sbjct: 281 YFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYG 340
Query: 234 KFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM-------------- 279
K G + A +FR + K SW+++I + +AL LF ++
Sbjct: 341 KQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVV 400
Query: 280 ----VLEACDS-------------------IPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
V++ C+ + NSVT+ + +HG +
Sbjct: 401 TWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHV 460
Query: 317 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 376
+R + + V NAL+ MY +CG +S G VF+ +++ D++SWNS+I YG +G+ +KA+
Sbjct: 461 IRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKAL 520
Query: 377 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 436
+F+ MI G P I+ + VL ACSHAGLVE+G+ +F SM ++ + P EHYAC+VDL
Sbjct: 521 SMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDL 580
Query: 437 LGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNY 496
LGR L EA +++++MP EP V G+LL SCR+H N ++AE ++ L LEP G+Y
Sbjct: 581 LGRVGFLKEASEIVKNMPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSY 640
Query: 497 VLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVS 544
+LL++IY+ W + +VR L K+ L+KV G SWIEVKKK Y F S
Sbjct: 641 MLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSS 688
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 164/360 (45%), Gaps = 51/360 (14%)
Query: 102 RDVH-RYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRE---RTIYIWNAFFRA 157
R VH + L+ + + LA LI++Y LG L AR VF+ + +WN+ +A
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLSDLRLWNSILKA 132
Query: 158 LAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC-VVSEFSVYPLQKGKEIHANILRH 216
G E LELYR M G+ D + +L+AC + F + + H +++
Sbjct: 133 NVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLC-----RAFHTQVIQI 187
Query: 217 GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELF 276
G +EN+HV+ LL +Y K G + A ++F MP +N +SW+ MI +++ A+++F
Sbjct: 188 GLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIF 247
Query: 277 HQMVLEACDSIPNSVTMVSVX-----------------------------------XXXX 301
M E + P+ VT SV
Sbjct: 248 EWMQRE--EFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCA 305
Query: 302 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 361
VHG++++ G + +P NALI +YG+ G++ E +F +++N + SWNS
Sbjct: 306 ELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIESWNS 365
Query: 362 LISMYGNNGYGKKAIQIF---ENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESM 417
LI+ + + G +A+ +F E M H V + +++ +V+ C+ G ++ F M
Sbjct: 366 LITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEYFRQM 425
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 119/257 (46%), Gaps = 49/257 (19%)
Query: 81 SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATK--LINMYHELGSLDCARK 138
S + + V CA+ + S VH Y++ G ++ YL ++ LI++Y + G + A
Sbjct: 293 SGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEE--YLPSRNALIHVYGKQGKVKDAEH 350
Query: 139 VFDETRERTIYIWNAFF----------RALAMV--------------------------- 161
+F + R + I WN+ AL++
Sbjct: 351 LFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCN 410
Query: 162 --GRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE 219
GRG++ LE +RQM +S + ++ T +L C + L G+EIH +++R
Sbjct: 411 VQGRGDDSLEYFRQMQFSKVLANSVTICCILSICA----ELPALNLGREIHGHVIRTSMS 466
Query: 220 ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM 279
ENI V L+++YAK G +S + VF A+ K+ +SW+++I Y + KAL +F +M
Sbjct: 467 ENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRM 526
Query: 280 VLEACDSIPNSVTMVSV 296
+ P+ + +V+V
Sbjct: 527 ISSGFH--PDGIALVAV 541
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 85/172 (49%), Gaps = 5/172 (2%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
TI ++ CA+ + + GR++H +++ + + ++ + L+NMY + G L VF+
Sbjct: 436 TICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI 495
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
R++ + WN+ + M G E+ L ++ +M SG D VL AC + +
Sbjct: 496 RDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGL----V 551
Query: 204 QKGKEIHANI-LRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 254
+KG+EI ++ R G E ++D+ + G + A+ + + MP + V
Sbjct: 552 EKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEPKV 603
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 245/464 (52%), Gaps = 32/464 (6%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
G+ +H ++ +G D ++ KL+ ++ + G L AR+VFDE + T+ +N
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS-VYPLQKGKEIHANILRHGYE 219
G +ELL L ++M++SG +D +T + VLKA + + P + +HA I++ E
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVE 172
Query: 220 ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK-----------NDM 268
+ ++T L+D Y K G + A +VF M +N V ++MI Y N
Sbjct: 173 LDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTT 232
Query: 269 PVKALELFHQMV-------------------LEACDSIPNSVTMVSVXXXXXXXXXXXXX 309
VK + +++ MV ++ PN T SV
Sbjct: 233 KVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVG 292
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 369
VH I++ G+ + + + ++L+ MY +CG I+ RVFD+++ +V SW S+I YG N
Sbjct: 293 QQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKN 352
Query: 370 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
G ++A+++F M + P+Y++F+ L ACSH+GLV++G +FESM Y + P MEH
Sbjct: 353 GNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEH 412
Query: 430 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
YAC+VDL+GRA L++A + MP P +W +LL SC +H N ELA A++ LF+L
Sbjct: 413 YACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLN 472
Query: 490 P-WNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSW 532
G Y+ L+++YA W +V +R++M +R + K G SW
Sbjct: 473 ADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 121/252 (48%), Gaps = 19/252 (7%)
Query: 19 LCYTSHVSSRLPVCFVSINP---SANPVKDIKSXXXXXXXQLIQSLCRGG-NHKQALEVL 74
+C TS +S + FV + VKDI +++ R G K+++++
Sbjct: 207 VCCTSMISGYMNQGFVEDAEEIFNTTKVKDI-----VVYNAMVEGFSRSGETAKRSVDMY 261
Query: 75 WSER----NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL 130
S + +P+ T +I +C+ +S G+ VH ++ SG+ + + L++MY +
Sbjct: 262 ISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKC 321
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
G ++ AR+VFD+ +E+ ++ W + G EE LEL+ +M I + T+ L
Sbjct: 322 GGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGAL 381
Query: 191 KACVVSEFSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
AC S + KG EI ++ R + + + ++D+ + G ++ A RAMP
Sbjct: 382 SACSHSGL----VDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMP 437
Query: 250 AK-NSVSWSAMI 260
+ +S W+A++
Sbjct: 438 ERPDSDIWAALL 449
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 258 bits (659), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 153/514 (29%), Positives = 251/514 (48%), Gaps = 30/514 (5%)
Query: 62 CRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKS-SFSDGRDVHRYLVDSGLDQDPYLA 120
C G + L +L P T L+ + + + G+ +H ++V GL + Y+
Sbjct: 114 CDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKFGLGSNLYVQ 173
Query: 121 TKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP 180
L+ MY G +D AR VFD + ++ WN + EE +EL +M + +
Sbjct: 174 NALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVS 233
Query: 181 SDRFTYTYVLKAC--------------VVSEFSVYPLQKGK-------------EIHANI 213
T VL AC VSE P + + +I I
Sbjct: 234 PTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRI 293
Query: 214 LRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKAL 273
R ++ T+++ Y + G + A + F MP ++ +SW+ MI Y + ++L
Sbjct: 294 FRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLRAGCFNESL 353
Query: 274 ELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 333
E+F +M ++ IP+ TMVSV + +I + + + + V NALI
Sbjct: 354 EIFREM--QSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALID 411
Query: 334 MYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYIS 393
MY +CG ++VF + D +W +++ NNG G++AI++F M + P I+
Sbjct: 412 MYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDIT 471
Query: 394 FITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
++ VL AC+H+G+V++ + F M S +RI P + HY CMVD+LGRA + EA +++ M
Sbjct: 472 YLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM 531
Query: 454 PFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVK 513
P P VWG+LLG+ R+H + +AE A+ + ELEP N Y LL +IYA K W D++
Sbjct: 532 PMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLR 591
Query: 514 SVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEE 547
VR+ + ++K PG S IEV + FV+ ++
Sbjct: 592 EVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDK 625
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 170/385 (44%), Gaps = 39/385 (10%)
Query: 102 RDVHRYLVDSGLDQDPYLATKLINMYHEL--GSLDCARKVFDETRERTIYIWNAFFRALA 159
+ +H + G+ +P KL + G + A K+F + E + +WN + +
Sbjct: 51 KQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWS 110
Query: 160 MVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE 219
V E + LY M G+ D T+ ++L + L GK++H ++++ G
Sbjct: 111 KVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGL---KRDGGALACGKKLHCHVVKFGLG 167
Query: 220 ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM 279
N++V L+ +Y+ G + A VF ++ SW+ MI Y + +++EL +M
Sbjct: 168 SNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEM 227
Query: 280 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 339
E P SVT++ V VH ++ + + + NAL+ Y CG
Sbjct: 228 --ERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACG 285
Query: 340 EISIGERVFDKVKNPDVVSWNSLISMY---GN-----------------------NGYGK 373
E+ I R+F +K DV+SW S++ Y GN +GY +
Sbjct: 286 EMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTIMIDGYLR 345
Query: 374 -----KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 428
++++IF M G+ P + ++VL AC+H G +E G+ + ++ + K +I +
Sbjct: 346 AGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWI-KTYIDKNKIKNDVV 404
Query: 429 HYACMVDLLGRANRLDEAIKLIEDM 453
++D+ + ++A K+ DM
Sbjct: 405 VGNALIDMYFKCGCSEKAQKVFHDM 429
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/469 (32%), Positives = 257/469 (54%), Gaps = 9/469 (1%)
Query: 80 PSHKTIEV--LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCAR 137
P H ++ L+ S A+ S G +H Y+V SGL P +A LIN Y + +R
Sbjct: 11 PCHNYNQICDLLLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSR 70
Query: 138 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
+ F+++ +++ W++ A LE ++M + D K+C +
Sbjct: 71 RAFEDSPQKSSTTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAI-- 128
Query: 198 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
+ G+ +H ++ GY+ ++ V ++L+D+YAK G I YA +F MP +N V+WS
Sbjct: 129 --LSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWS 186
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
M+ YA+ +AL LF + + E + N + SV +HG +
Sbjct: 187 GMMYGYAQMGENEEALWLFKEALFE--NLAVNDYSFSSVISVCANSTLLELGRQIHGLSI 244
Query: 318 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
+ DS V ++L+++Y +CG +VF++V ++ WN+++ Y + + +K I+
Sbjct: 245 KSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIE 304
Query: 378 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 437
+F+ M G+ P++I+F+ VL ACSHAGLV+EG+ F+ M + RI P +HYA +VD+L
Sbjct: 305 LFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDML 363
Query: 438 GRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYV 497
GRA RL EA+++I +MP +P +VWG+LL SC +H N ELA A+ +FEL P ++G ++
Sbjct: 364 GRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHI 423
Query: 498 LLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 546
L++ YA + D RKL+ R +K G SW+E + K+++F + E
Sbjct: 424 SLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGE 472
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 94/201 (46%), Gaps = 9/201 (4%)
Query: 65 GNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLA 120
G +++AL E L+ + + +I CA + GR +H + S D ++
Sbjct: 196 GENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVG 255
Query: 121 TKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIP 180
+ L+++Y + G + A +VF+E + + IWNA +A A ++++EL+++M SG+
Sbjct: 256 SSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMK 315
Query: 181 SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISY 240
+ T+ VL AC + + +G+ + E +L+D+ + G +
Sbjct: 316 PNFITFLNVLNACSHAGL----VDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQE 371
Query: 241 ANSVFRAMPAKNSVS-WSAMI 260
A V MP + S W A++
Sbjct: 372 ALEVITNMPIDPTESVWGALL 392
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 256 bits (653), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 139/453 (30%), Positives = 241/453 (53%), Gaps = 10/453 (2%)
Query: 102 RDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETR-ERTIYIWNAFFRALAM 160
+ VH ++ GL + + +I+ Y + GS+ A++VFD + + WN+ +
Sbjct: 223 KQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSK 282
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 220
E EL+ QM + +D +TYT +L AC E ++ GK +H +++ G E+
Sbjct: 283 HELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIF----GKSLHGMVIKKGLEQ 338
Query: 221 NIHVMTTLLDVYAKF--GCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 278
L+ +Y +F G + A S+F ++ +K+ +SW+++I +A+ + A++ F
Sbjct: 339 VTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS- 397
Query: 279 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 338
L + + + ++ +H + G S VI++LI MY +C
Sbjct: 398 -YLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKC 456
Query: 339 GEISIGERVFDKVKNP-DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
G I + F ++ + V+WN++I Y +G G+ ++ +F M +Q V +++F +
Sbjct: 457 GIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAI 516
Query: 398 LCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEP 457
L ACSH GL++EG L M Y+I P MEHYA VDLLGRA +++A +LIE MP P
Sbjct: 517 LTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNP 576
Query: 458 GPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRK 517
P V + LG CR E+A + + L E+EP + YV L+ +Y++ K W + SV+K
Sbjct: 577 DPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKK 636
Query: 518 LMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
+M +R ++KVPG SWIE++ ++ +F + + NP
Sbjct: 637 MMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNP 669
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 91/335 (27%), Positives = 160/335 (47%), Gaps = 11/335 (3%)
Query: 104 VHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGR 163
H Y + G D Y++ ++++ Y + G L A +FDE +R WN G+
Sbjct: 22 THCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGK 81
Query: 164 GEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIH 223
E+ L+ M SG D ++++ +LK SV G+++H +++ GYE N++
Sbjct: 82 LEDAWCLFTCMKRSGSDVDGYSFSRLLKGIA----SVKRFDLGEQVHGLVIKGGYECNVY 137
Query: 224 VMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
V ++L+D+YAK + A F+ + NSVSW+A+I + + A L M ++A
Sbjct: 138 VGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKA 197
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
++ ++ T + VH +L+ GL + + NA+I+ Y CG +S
Sbjct: 198 AVTM-DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSD 256
Query: 344 GERVFDKV-KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
+RVFD + + D++SWNS+I+ + + + A ++F M V ++ +L ACS
Sbjct: 257 AKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACS 316
Query: 403 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 437
EE +I F L I G+E + L
Sbjct: 317 G----EEHQI-FGKSLHGMVIKKGLEQVTSATNAL 346
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 107/195 (54%), Gaps = 7/195 (3%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL--GSLDCARKVFDETRE 145
L+ +C+ + G+ +H ++ GL+Q LI+MY + G+++ A +F+ +
Sbjct: 311 LLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKS 370
Query: 146 RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQK 205
+ + WN+ A G E+ ++ + + S I D + ++ +L++C + LQ
Sbjct: 371 KDLISWNSIITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCS----DLATLQL 426
Query: 206 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS-VSWSAMIGCYA 264
G++IHA + G+ N V+++L+ +Y+K G I A F+ + +K+S V+W+AMI YA
Sbjct: 427 GQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYA 486
Query: 265 KNDMPVKALELFHQM 279
++ + +L+LF QM
Sbjct: 487 QHGLGQVSLDLFSQM 501
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 203 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 262
QK H ++ G +I+V +LD Y KFG + YAN +F MP ++SVSW+ MI
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISG 75
Query: 263 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 322
Y A LF M D + + + VHG +++ G +
Sbjct: 76 YTSCGKLEDAWCLFTCMKRSGSD--VDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYE 133
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 366
+ V ++L+ MY +C + F ++ P+ VSWN+LI+ +
Sbjct: 134 CNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGF 177
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 76 SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDC 135
SE L++SC+ ++ G+ +H SG + ++ + LI MY + G ++
Sbjct: 402 SEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIES 461
Query: 136 ARKVFDE-TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACV 194
ARK F + + + + WNA A G G+ L+L+ QM + D T+T +L AC
Sbjct: 462 ARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACS 521
Query: 195 VSEFSVYPLQKGKEIHANILRHGY--EENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
+ +Q+G E+ N++ Y + + +D+ + G ++ A + +MP
Sbjct: 522 HTGL----IQEGLEL-LNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMP 573
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 157/469 (33%), Positives = 229/469 (48%), Gaps = 46/469 (9%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P + +I++ S G +H + GL+ ++ T LI MY G ++ ARKV
Sbjct: 104 PDSFSFAFVIKAVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKV 163
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FDE + + WNA V+ AC F
Sbjct: 164 FDEMHQPNLVAWNA-----------------------------------VITAC----FR 184
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
+ +EI +L + +L Y K G + A +F MP ++ VSWS M
Sbjct: 185 GNDVAGAREIFDKMLVRNHTS----WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTM 240
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I A N ++ F + L+ PN V++ V +HGF+ +
Sbjct: 241 IVGIAHNGSFNESFLYFRE--LQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKA 298
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD-VVSWNSLISMYGNNGYGKKAIQI 378
G I+ V NALI MY RCG + + VF+ ++ +VSW S+I+ +G G++A+++
Sbjct: 299 GYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRL 358
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
F M GV+P ISFI++L ACSHAGL+EEG+ F M Y I P +EHY CMVDL G
Sbjct: 359 FNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYG 418
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVL 498
R+ +L +A I MP P VW +LLG+C H N ELAE+ L EL+P N+G+ VL
Sbjct: 419 RSGKLQKAYDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVL 478
Query: 499 LADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEE 547
L++ YA A W DV S+RK M + ++K S +EV K +Y F + E+
Sbjct: 479 LSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEK 527
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 172/398 (43%), Gaps = 56/398 (14%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDC---ARKVFDETR 144
L+ SC + + +H + G+D D Y KLI ++ + D AR++
Sbjct: 11 LLNSCKNLRALTQ---IHGLFIKYGVDTDSYFTGKLI-LHCAISISDALPYARRLLLCFP 66
Query: 145 ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG-IPSDRFTYTYVLKACVVSEFSVYPL 203
E +++N R + + ++ +M G + D F++ +V+KA V F L
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKA--VENFR--SL 122
Query: 204 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI-GC 262
+ G ++H L+HG E ++ V TTL+ +Y GC+ +A VF M N V+W+A+I C
Sbjct: 123 RTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITAC 182
Query: 263 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 322
+ ND+ A E+F +M++ S
Sbjct: 183 FRGNDV-AGAREIFDKMLVRNHTS------------------------------------ 205
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
N ++ Y + GE+ +R+F ++ + D VSW+++I +NG ++ F +
Sbjct: 206 -----WNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFREL 260
Query: 383 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANR 442
G+SP+ +S VL ACS +G E GKIL + K + ++D+ R
Sbjct: 261 QRAGMSPNEVSLTGVLSACSQSGSFEFGKIL-HGFVEKAGYSWIVSVNNALIDMYSRCGN 319
Query: 443 LDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 480
+ A + E M + W S++ +H E A R
Sbjct: 320 VPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVR 357
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 93/186 (50%), Gaps = 7/186 (3%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
+P+ ++ ++ +C+Q SF G+ +H ++ +G + LI+MY G++ AR
Sbjct: 266 SPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARL 325
Query: 139 VFDETRE-RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
VF+ +E R I W + LAM G+GEE + L+ +M G+ D ++ +L AC +
Sbjct: 326 VFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAG 385
Query: 198 FSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP-AKNSVS 255
+++G++ + + R + E I ++D+Y + G + A MP ++
Sbjct: 386 L----IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIV 441
Query: 256 WSAMIG 261
W ++G
Sbjct: 442 WRTLLG 447
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 112/241 (46%), Gaps = 23/241 (9%)
Query: 187 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN--------IHVMTTLLDVYAKFGCI 238
T + C+ S L+ +IH +++G + + +H ++ D +
Sbjct: 2 TIAIHHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDA------L 55
Query: 239 SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXX 298
YA + P ++ ++ ++ Y+++D P ++ +F +M+ + P+S + V
Sbjct: 56 PYARRLLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGF-VFPDSFSFAFVIK 114
Query: 299 XXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVS 358
+H L+ GL+S + V LI MYG CG + +VFD++ P++V+
Sbjct: 115 AVENFRSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA 174
Query: 359 WNSLIS--MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFES 416
WN++I+ GN+ G + +IF+ M+ + ++ S+ +L AG +E K +F
Sbjct: 175 WNAVITACFRGNDVAGAR--EIFDKMLVR----NHTSWNVMLAGYIKAGELESAKRIFSE 228
Query: 417 M 417
M
Sbjct: 229 M 229
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 153/508 (30%), Positives = 256/508 (50%), Gaps = 62/508 (12%)
Query: 97 SFSDGRDVHRYLVDSGLDQDPYLATKLI------NMYHELGSLDCARKVFDETRERTIYI 150
+ D +H + SG +D A +++ +++H LD A K+F++ +R +
Sbjct: 35 TIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHR--DLDYAHKIFNQMPQRNCFS 92
Query: 151 WNAFFRALAMVGRGEELLEL---YRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
WN R + + L+ + Y M+ + +RFT+ VLKAC +Q+GK
Sbjct: 93 WNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACA----KTGKIQEGK 148
Query: 208 EIHANILRHGY--------------------------------EENIHVMT--------- 226
+IH L++G+ E+++ VMT
Sbjct: 149 QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEI 208
Query: 227 ----TLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLE 282
++D Y + G A +F M ++ VSW+ MI Y+ N A+E+F +M +
Sbjct: 209 VLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREM--K 266
Query: 283 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 342
D PN VT+VSV +H + G+ + +ALI MY +CG I
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 343 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
VF+++ +V++W+++I+ + +G AI F M GV PS +++I +L ACS
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS 386
Query: 403 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVW 462
H GLVEEG+ F M+S + P +EHY CMVDLLGR+ LDEA + I +MP +P +W
Sbjct: 387 HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIW 446
Query: 463 GSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKR 522
+LLG+CR+ N E+ +R + +L ++ P ++G YV L+++YA WS+V +R M ++
Sbjct: 447 KALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 506
Query: 523 VLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
++K PGCS I++ ++ FV ++ +P
Sbjct: 507 DIRKDPGCSLIDIDGVLHEFVVEDDSHP 534
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 145/365 (39%), Gaps = 78/365 (21%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINM------------- 126
P+ T ++++CA+ +G+ +H + G D ++ + L+ M
Sbjct: 126 PNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVL 185
Query: 127 --------------------------------YHELGSLDCARKVFDETRERTIYIWNAF 154
Y LG AR +FD+ R+R++ WN
Sbjct: 186 FYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTM 245
Query: 155 FRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL 214
++ G ++ +E++R+M I + T VL A +S L+ G+ +H
Sbjct: 246 ISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPA--ISRLG--SLELGEWLHLYAE 301
Query: 215 RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALE 274
G + + + L+D+Y+K G I A VF +P +N ++WSAMI +A + A++
Sbjct: 302 DSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAID 361
Query: 275 LFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG---------LDSIM 325
F +M P+ V +++ HG ++ G +D +
Sbjct: 362 CFCKM--RQAGVRPSDVAYINLLTACS-----------HGGLVEEGRRYFSQMVSVDGLE 408
Query: 326 PVI---NALITMYGRCGEISIGER-VFDKVKNPDVVSWNSLIS---MYGNNGYGKKAIQI 378
P I ++ + GR G + E + + PD V W +L+ M GN GK+ I
Sbjct: 409 PRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANI 468
Query: 379 FENMI 383
+M+
Sbjct: 469 LMDMV 473
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 10/211 (4%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I G K A+EV + P++ T+ ++ + ++ S G +H Y DSG
Sbjct: 245 MISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSG 304
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ D L + LI+MY + G ++ A VF+ + W+A A+ G+ + ++ +
Sbjct: 305 IRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDV 231
+M +G+ Y +L AC +++G+ + ++ G E I ++D+
Sbjct: 365 KMRQAGVRPSDVAYINLLTACSHGGL----VEEGRRYFSQMVSVDGLEPRIEHYGCMVDL 420
Query: 232 YAKFGCISYANSVFRAMPAK-NSVSWSAMIG 261
+ G + A MP K + V W A++G
Sbjct: 421 LGRSGLLDEAEEFILNMPIKPDDVIWKALLG 451
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 255 bits (651), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 171/560 (30%), Positives = 268/560 (47%), Gaps = 77/560 (13%)
Query: 39 SANPVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWSERNPSHK--TIEVLIQSCAQKS 96
+A P KD+ + L+ G ++AL L+ E N S T+ ++++CA+
Sbjct: 148 NAMPEKDVVTLN-----SLLHGYILNGYAEEALR-LFKELNFSADAITLTTVLKACAELE 201
Query: 97 SFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCA-------------------- 136
+ G+ +H ++ G++ D + + L+N+Y + G L A
Sbjct: 202 ALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALIS 261
Query: 137 -----------RKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFT 185
R +FD R + +WN+ E L L+ +M + D T
Sbjct: 262 GYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETREDSRT 320
Query: 186 YTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK----------- 234
V+ AC+ F L+ GK++H + + G ++I V +TLLD+Y+K
Sbjct: 321 LAAVINACIGLGF----LETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 235 ------------------FGC--ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALE 274
F C I A VF + K+ +SW++M +++N V+ LE
Sbjct: 377 SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLE 436
Query: 275 LFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITM 334
FHQM D + V++ SV V GLDS V ++LI +
Sbjct: 437 YFHQM--HKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDL 494
Query: 335 YGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISF 394
Y +CG + G RVFD + D V WNS+IS Y NG G +AI +F+ M G+ P+ I+F
Sbjct: 495 YCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITF 554
Query: 395 ITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 454
+ VL AC++ GLVEEG+ LFESM + P EH++CMVDLL RA ++EAI L+E+MP
Sbjct: 555 MVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMP 614
Query: 455 FEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKS 514
F+ ++W S+L C + + ++A+ + ELEP N+ YV L+ I+A + W
Sbjct: 615 FDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDWESSAL 674
Query: 515 VRKLMGKRVLQKVPGCSWIE 534
VRKLM + + K PG SW +
Sbjct: 675 VRKLMRENNVTKNPGSSWTD 694
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 145/356 (40%), Gaps = 81/356 (22%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSG-LDQDPYLATKLINMYHELGSLDCARKVFDETRER 146
L+QSC+ ++ + R + L+ G L +A L+ MY G + AR +FDE +R
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 147 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG 206
+ WN ++E Y G S RF F + P
Sbjct: 92 NYFSWNT-------------MIEGYMNSGEKG-TSLRF-------------FDMMPE--- 121
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 266
R GY N+ ++ +AK G +S A +F AMP K+ V+ ++++ Y N
Sbjct: 122 --------RDGYSWNV-----VVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILN 168
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 326
+AL LF ++ A +++T+ +V +H IL G++
Sbjct: 169 GYAEEALRLFKELNFSA-----DAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSK 223
Query: 327 VINALITMYGRCGEISIGERVFDKVKNPD------------------------------- 355
+ ++L+ +Y +CG++ + + ++++ PD
Sbjct: 224 MNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRC 283
Query: 356 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
V+ WNS+IS Y N +A+ +F M ++ S + V+ AC G +E GK
Sbjct: 284 VILWNSMISGYIANNMKMEALVLFNEMRNETREDSR-TLAAVINACIGLGFLETGK 338
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 312 VHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 370
+G +L++G L SI+ V N L+ MY R G++ I +FD++ + + SWN++I Y N+G
Sbjct: 48 TNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSG 107
Query: 371 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 430
+++ F+ M + Y S+ V+ + AG + + LF +M K + +
Sbjct: 108 EKGTSLRFFDMMPER---DGY-SWNVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLH 163
Query: 431 ACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
+++ G A +EA++L +++ F ++L +C
Sbjct: 164 GYILN--GYA---EEALRLFKELNFSADAITLTTVLKAC 197
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 165/503 (32%), Positives = 262/503 (52%), Gaps = 15/503 (2%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I L + G +A+E S R P T+ + SCA G+ +H + G
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRG-EELLELY 171
+D + ++ L+ +Y E G L+ RK+F E WN+ ALA R E + +
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
+G +R T++ VL A F + GK+IH L++ + L+
Sbjct: 506 LNAQRAGQKLNRITFSSVLSAVSSLSFG----ELGKQIHGLALKNNIADEATTENALIAC 561
Query: 232 YAKFGCISYANSVFRAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
Y K G + +F M + ++V+W++MI Y N++ KAL+L M L+ + +S
Sbjct: 562 YGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFM-LQTGQRL-DS 619
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK 350
+V VH +R L+S + V +AL+ MY +CG + R F+
Sbjct: 620 FMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNT 679
Query: 351 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP-SYISFITVLCACSHAGLVEE 409
+ + SWNS+IS Y +G G++A+++FE M G +P +++F+ VL ACSHAGL+EE
Sbjct: 680 MPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEE 739
Query: 410 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS- 468
G FESM Y + P +EH++CM D+LGRA LD+ IE MP +P +W ++LG+
Sbjct: 740 GFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGAC 799
Query: 469 CRIHC-NAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKV 527
CR + AEL ++A+ MLF+LEP NA NYVLL ++YA W D+ RK M ++K
Sbjct: 800 CRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKE 859
Query: 528 PGCSWIEVKKKIYSFVSSEEDNP 550
G SW+ +K ++ FV+ ++ +P
Sbjct: 860 AGYSWVTMKDGVHMFVAGDKSHP 882
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 190/424 (44%), Gaps = 18/424 (4%)
Query: 57 LIQSLCRGGNHKQALEVLWS---ERNPSHKTIEV-LIQSCAQKSSFSD--GRDVHRYLVD 110
++ R G HK+AL L E S++ V ++++C + S GR +H +
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 111 SGLDQDPYLATKLINMYHE-LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLE 169
D ++ LI+MY + +GS+ A F + + WN+ + G
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 170 LYRQMNWSGIPSDRFTY-TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
++ M + G +T+ + V AC ++E V L+ +I I + G ++ V + L
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLE---QIMCTIQKSGLLTDLFVGSGL 249
Query: 229 LDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 288
+ +AK G +SYA VF M +N+V+ + ++ + +A +LF M D P
Sbjct: 250 VSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMN-SMIDVSP 308
Query: 289 NS-VTMVSV--XXXXXXXXXXXXXXXVHGFILRRGL-DSIMPVINALITMYGRCGEISIG 344
S V ++S VHG ++ GL D ++ + N L+ MY +CG I+
Sbjct: 309 ESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADA 368
Query: 345 ERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA 404
RVF + + D VSWNS+I+ NG +A++ +++M + P + I+ L +C+
Sbjct: 369 RRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASL 428
Query: 405 GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGS 464
+ G+ + L K I + ++ L L+E K+ MP E W S
Sbjct: 429 KWAKLGQQIHGESL-KLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP-EHDQVSWNS 486
Query: 465 LLGS 468
++G+
Sbjct: 487 IIGA 490
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 178/407 (43%), Gaps = 19/407 (4%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
+QSC + R H L + LD+D YL LIN Y E G ARKVFDE R
Sbjct: 9 FVQSCVGHRGAA--RFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
W + G +E L R M GI S+++ + VL+AC E + G+
Sbjct: 67 CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRAC--QEIGSVGILFGR 124
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAK-FGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 266
+IH + + Y + V L+ +Y K G + YA F + KNSVSW+++I Y++
Sbjct: 125 QIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX--XXXXXXVHGFILRRGLDSI 324
A +F M + S P T S+ + I + GL +
Sbjct: 185 GDQRSAFRIFSSMQYDG--SRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTD 242
Query: 325 MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH 384
+ V + L++ + + G +S +VF++++ + V+ N L+ +G++A ++F +M
Sbjct: 243 LFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNS 302
Query: 385 Q-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC-----MVDLLG 438
VSP S++ +L + L EE + + + I G+ + +V++
Sbjct: 303 MIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYA 360
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLL-GSCRIHCNAELAERASAM 484
+ + +A ++ M + W S++ G + C E ER +M
Sbjct: 361 KCGSIADARRVFYFMT-DKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 253 bits (647), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 161/497 (32%), Positives = 260/497 (52%), Gaps = 14/497 (2%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I S RG ++AL E++ S P+ T+ ++ SC +G+ VH + V
Sbjct: 274 MISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE 333
Query: 113 LDQD-PYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
LD + L+ L+ +Y E G L V +R I WN+ A G + L L+
Sbjct: 334 LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLF 393
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
RQM I D FT + AC + PL GK+IH +++R + V +L+D+
Sbjct: 394 RQMVTQRIKPDAFTLASSISAC--ENAGLVPL--GKQIHGHVIRTDVSDEF-VQNSLIDM 448
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSV 291
Y+K G + A++VF + ++ V+W++M+ +++N V+A+ LF M + N V
Sbjct: 449 YSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFDYMYHSYLE--MNEV 506
Query: 292 TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV 351
T ++V VH ++ GL + ALI MY +CG+++ E VF +
Sbjct: 507 TFLAVIQACSSIGSLEKGKWVHHKLIISGLKDLF-TDTALIDMYAKCGDLNAAETVFRAM 565
Query: 352 KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
+ +VSW+S+I+ YG +G AI F M+ G P+ + F+ VL AC H+G VEEGK
Sbjct: 566 SSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGK 625
Query: 412 ILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRI 471
F +++ + + P EH+AC +DLL R+ L EA + I++MPF +VWGSL+ CRI
Sbjct: 626 YYF-NLMKSFGVSPNSEHFACFIDLLSRSGDLKEAYRTIKEMPFLADASVWGSLVNGCRI 684
Query: 472 HCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCS 531
H ++ + L ++ + G Y LL++IYAE W + + +R M L+KVPG S
Sbjct: 685 HQKMDIIKAIKNDLSDIVTDDTGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYS 744
Query: 532 WIEVKKKIYSFVSSEED 548
IE+ +K++ F + EE+
Sbjct: 745 AIEIDQKVFRFGAGEEN 761
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 170/325 (52%), Gaps = 9/325 (2%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSG-LDQDPYLATKLINMYHELGSLDCARKVFDETRER 146
L +SC SS +H +L+ +G L +DP TKLI Y +GS D +R VF+
Sbjct: 7 LFRSC---SSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 147 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG 206
+++ + + ++LY ++ +F + VL+AC S L G
Sbjct: 64 DSFMYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSR---EHLSVG 120
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 266
++H I++ G +++ + T+LL +Y + G +S A VF MP ++ V+WS ++ +N
Sbjct: 121 GKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLEN 180
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 326
VKAL +F MV + + P++VTM+SV VHG I R+ D
Sbjct: 181 GEVVKALRMFKCMVDDGVE--PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDET 238
Query: 327 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 386
+ N+L+TMY +CG++ ER+F+K+ + VSW ++IS Y + +KA++ F MI G
Sbjct: 239 LCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSG 298
Query: 387 VSPSYISFITVLCACSHAGLVEEGK 411
+ P+ ++ +VL +C GL+ EGK
Sbjct: 299 IEPNLVTLYSVLSSCGLIGLIREGK 323
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 188/381 (49%), Gaps = 11/381 (2%)
Query: 88 LIQSCA-QKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRER 146
++++CA + S G VH ++ G+D D + T L+ MY + G+L A KVFD R
Sbjct: 106 VLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVR 165
Query: 147 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG 206
+ W+ + G + L +++ M G+ D T V++ C + L+
Sbjct: 166 DLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCA----ELGCLRIA 221
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 266
+ +H I R ++ + + +LL +Y+K G + + +F + KN+VSW+AMI Y +
Sbjct: 222 RSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRG 281
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 326
+ KAL F +M+ + PN VT+ SV VHGF +RR LD
Sbjct: 282 EFSEKALRSFSEMIKSGIE--PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYE 339
Query: 327 VIN-ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
++ AL+ +Y CG++S E V V + ++V+WNSLIS+Y + G +A+ +F M+ Q
Sbjct: 340 SLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQ 399
Query: 386 GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDE 445
+ P + + + AC +AGLV GK + ++ +++ ++D+ ++ +D
Sbjct: 400 RIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSKSGSVDS 457
Query: 446 AIKLIEDMPFEPGPTVWGSLL 466
A + + T W S+L
Sbjct: 458 ASTVFNQIKHRSVVT-WNSML 477
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 166/333 (49%), Gaps = 8/333 (2%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T+ +++ CA+ R VH + D D L L+ MY + G L + ++
Sbjct: 200 PDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMYSKCGDLLSSERI 259
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F++ ++ W A + E+ L + +M SGI + T VL +C +
Sbjct: 260 FEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGL---- 315
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMT-TLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
+ +++GK +H +R + N ++ L+++YA+ G +S +V R + +N V+W++
Sbjct: 316 IGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNS 375
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
+I YA M ++AL LF QMV + P++ T+ S +HG ++R
Sbjct: 376 LISLYAHRGMVIQALGLFRQMVTQRIK--PDAFTLASSISACENAGLVPLGKQIHGHVIR 433
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
+ V N+LI MY + G + VF+++K+ VV+WNS++ + NG +AI +
Sbjct: 434 TDVSDEF-VQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISL 492
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
F+ M H + + ++F+ V+ ACS G +E+GK
Sbjct: 493 FDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGK 525
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 148/428 (34%), Positives = 230/428 (53%), Gaps = 19/428 (4%)
Query: 114 DQDPYLATKLINMYHELGSLDCARKVF-DETRERTI------YIWNAFFRALAMVGRGEE 166
D++ LAT L N SL R++ D R R + ++WN R+ +
Sbjct: 45 DRNKLLATLLSN----CTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLD 100
Query: 167 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMT 226
+++Y M S + DR++ V+KA V ++ GKE+H+ +R G+ + +
Sbjct: 101 AIQVYLGMVRSTVLPDRYSLPIVIKAAV----QIHDFTLGKELHSVAVRLGFVGDEFCES 156
Query: 227 TLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS 286
+ +Y K G A VF P + SW+A+IG +A+E+F M +
Sbjct: 157 GFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLE- 215
Query: 287 IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD--SIMPVINALITMYGRCGEISIG 344
P+ TMVSV +H +L+ + S + ++N+LI MYG+CG + +
Sbjct: 216 -PDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLA 274
Query: 345 ERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA 404
+F++++ +VVSW+S+I Y NG +A++ F M GV P+ I+F+ VL AC H
Sbjct: 275 SHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKITFVGVLSACVHG 334
Query: 405 GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGS 464
GLVEEGK F M S++ + PG+ HY C+VDLL R +L EA K++E+MP +P VWG
Sbjct: 335 GLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGC 394
Query: 465 LLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVL 524
L+G C + E+AE + + ELEPWN G YV+LA++YA MW DV+ VRKLM + +
Sbjct: 395 LMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVERVRKLMKTKKV 454
Query: 525 QKVPGCSW 532
K+P S+
Sbjct: 455 AKIPAYSY 462
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 32/300 (10%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P ++ ++I++ Q F+ G+++H V G D + + I +Y + G + ARKV
Sbjct: 115 PDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKV 174
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FDE ER + WNA L GR E +E++ M SG+ D FT V +C
Sbjct: 175 FDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCG----G 230
Query: 200 VYPLQKGKEIHANILRHGYEE--NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
+ L ++H +L+ EE +I ++ +L+D+Y K G + A+ +F M +N VSWS
Sbjct: 231 LGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWS 290
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
+MI YA N ++ALE F QM PN +T V V VHG ++
Sbjct: 291 SMIVGYAANGNTLEALECFRQM--REFGVRPNKITFVGV-----------LSACVHGGLV 337
Query: 318 RRG------------LDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLIS 364
G L+ + ++ + R G++ ++V +++ P+V+ W L+
Sbjct: 338 EEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEMPMKPNVMVWGCLMG 397
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 159/531 (29%), Positives = 265/531 (49%), Gaps = 46/531 (8%)
Query: 56 QLIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
++++SL G + + L + R P + T+ V+++S + +G VH Y V +
Sbjct: 16 KMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKA 75
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
GL+ D Y++ L+ MY LG ++ KVFDE +R + WN + GR E+ + ++
Sbjct: 76 GLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVF 135
Query: 172 RQMNW-SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLD 230
++M+ S + D T L AC ++ L+ G+ I+ ++ +E ++ + L+D
Sbjct: 136 KRMSQESNLKFDEGTIVSTLSACS----ALKNLEIGERIYRFVVTE-FEMSVRIGNALVD 190
Query: 231 VYAKFGCISYANSVFRAM-------------------------------PAKNSVSWSAM 259
++ K GC+ A +VF +M P K+ V W+AM
Sbjct: 191 MFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAM 250
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
+ Y + + +ALELF M + P++ +VS+ +HG+I
Sbjct: 251 MNGYVQFNRFDEALELFRCM--QTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINEN 308
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
+ V AL+ MY +CG I VF ++K D SW SLI NG +A+ ++
Sbjct: 309 RVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLY 368
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 439
M + GV I+F+ VL AC+H G V EG+ +F SM ++ + P EH +C++DLL R
Sbjct: 369 YEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCR 428
Query: 440 ANRLDEAIKLIEDMPFEPGPT---VWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNY 496
A LDEA +LI+ M E T V+ SLL + R + N ++AER + L ++E ++ +
Sbjct: 429 AGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAH 488
Query: 497 VLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEE 547
LLA +YA A W DV +VR+ M ++K PGCS IE+ + F+ ++
Sbjct: 489 TLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDD 539
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 169/377 (44%), Gaps = 48/377 (12%)
Query: 147 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQK- 205
++ ++N ++LA ++L L+ ++ G+ D FT VLK S+ L+K
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLK-------SIGRLRKV 62
Query: 206 --GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 263
G+++H ++ G E + +V +L+ +YA G I + VF MP ++ VSW+ +I Y
Sbjct: 63 IEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSY 122
Query: 264 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 323
N A+ +F +M E+ T+VS ++ F++ +
Sbjct: 123 VGNGRFEDAIGVFKRMSQESNLKFDEG-TIVSTLSACSALKNLEIGERIYRFVVTE-FEM 180
Query: 324 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGN--------------- 368
+ + NAL+ M+ +CG + VFD +++ +V W S++ Y +
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP 240
Query: 369 -----------NGYGK-----KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 412
NGY + +A+++F M G+ P +++L C+ G +E+GK
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKW 300
Query: 413 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
+ +++ R+ +VD+ + ++ A+++ ++ E W SL+ ++
Sbjct: 301 I-HGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIK-ERDTASWTSLIYGLAMN 358
Query: 473 CNAELAERASAMLFELE 489
++ RA + +E+E
Sbjct: 359 ---GMSGRALDLYYEME 372
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 154/566 (27%), Positives = 259/566 (45%), Gaps = 77/566 (13%)
Query: 57 LIQSLCRGGNHKQALEVL----WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
++ S R G H++A+ + +S+ P + ++ +CA + GR + ++ SG
Sbjct: 41 MLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSG 100
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFD------------------------------- 141
+ LI+MY + A KVF
Sbjct: 101 FCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDV 160
Query: 142 --ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
E +R + WN A G+ E L L+++M S D +T++ ++ AC +
Sbjct: 161 FVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSN 220
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG----------------------- 236
V G+ +HA +L++G+ + ++L Y K G
Sbjct: 221 VV---YGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSI 277
Query: 237 ---CISYANS-----VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 288
C+ + VF P KN V+W+ MI Y +N +AL F +M+ DS
Sbjct: 278 IDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDS-- 335
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
+ +V +HG ++ G V NAL+ +Y +CG+I +R F
Sbjct: 336 DHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAF 395
Query: 349 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
+ N D+VSWN+++ +G +G +A+++++NMI G+ P ++FI +L CSH+GLVE
Sbjct: 396 GDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVE 455
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIED----MPFEPGPTVWGS 464
EG ++FESM+ YRI ++H CM+D+ GR L EA L + + W +
Sbjct: 456 EGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWET 515
Query: 465 LLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVL 524
LLG+C H + EL S +L EP ++VLL+++Y W + + VR+ M +R +
Sbjct: 516 LLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGM 575
Query: 525 QKVPGCSWIEVKKKIYSFVSSEEDNP 550
+K PGCSWIEV ++ +FV + +P
Sbjct: 576 KKTPGCSWIEVGNQVSTFVVGDSSHP 601
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 179/415 (43%), Gaps = 77/415 (18%)
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
G + AR+VFD E WN + + +G +E + L+ Q+ +S D +++T +L
Sbjct: 18 GRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAIL 77
Query: 191 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM-- 248
C S+ ++ G++I + ++R G+ ++ V +L+D+Y K AN VFR M
Sbjct: 78 STCA----SLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCC 133
Query: 249 PAKNSVSWSAMIGCYAKNDMPVKALELFHQM-------------------VLEACDSI-- 287
++N V+W +++ Y + AL++F +M LE+C S+
Sbjct: 134 DSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFK 193
Query: 288 --------PNSVTMVSVXXX-XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 338
P+ T S+ VH +L+ G S + N++++ Y +
Sbjct: 194 EMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKL 253
Query: 339 GE--------------------------ISIGE-----RVFDKVKNPDVVSWNSLISMYG 367
G + IGE VF ++V+W ++I+ YG
Sbjct: 254 GSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYG 313
Query: 368 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGM 427
NG G++A++ F M+ GV + ++ VL ACS L+ GK++ + IH G
Sbjct: 314 RNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCL-----IHCGF 368
Query: 428 EHYA----CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
+ YA +V+L + + EA + D+ W ++L + +H A+ A
Sbjct: 369 QGYAYVGNALVNLYAKCGDIKEADRAFGDIA-NKDLVSWNTMLFAFGVHGLADQA 422
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 12/198 (6%)
Query: 225 MTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
+T+ + AK G I+ A VF MP ++V+W+ M+ Y++ + +A+ LF Q L
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQ--LRFS 64
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 344
D+ P+ + ++ + ++R G + +PV N+LI MYG+C +
Sbjct: 65 DAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSA 124
Query: 345 ERVFDKV--KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI--TVLCA 400
+VF + + + V+W SL+ Y N + A+ +F M P ++F ++
Sbjct: 125 NKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEM------PKRVAFAWNIMISG 178
Query: 401 CSHAGLVEEGKILFESML 418
+H G +E LF+ ML
Sbjct: 179 HAHCGKLESCLSLFKEML 196
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
S++ + + I + G I+ +VFD + D V+WN++++ Y G ++AI +F +
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 383 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANR 442
P SF +L C+ G V+ G+ + +S++ + + ++D+ G+ +
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKI-QSLVIRSGFCASLPVNNSLIDMYGKCSD 120
Query: 443 LDEAIKLIEDMPFEP-GPTVWGSLLGSCRIHCNAELAERASAMLFEL 488
A K+ DM + W SLL + + NAE E A + E+
Sbjct: 121 TLSANKVFRDMCCDSRNEVTWCSLLFA---YMNAEQFEAALDVFVEM 164
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 136/424 (32%), Positives = 219/424 (51%), Gaps = 6/424 (1%)
Query: 110 DSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLE 169
DSG + ++ G ++ R++F + ++ WNA + EE +
Sbjct: 343 DSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAIS 402
Query: 170 LYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLL 229
+RQM + + D+ T + +L +C F L+ GK+IH ++R +N H+++ L+
Sbjct: 403 NFRQMQFQNLKPDKTTLSVILSSCARLRF----LEGGKQIHGVVIRTEISKNSHIVSGLI 458
Query: 230 DVYAKFGCISYANSVFRAMPAKNSVS-WSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 288
VY++ + + +F + ++ W++MI + N + KAL LF +M A P
Sbjct: 459 AVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAV-LCP 517
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
N + +V HG +++ G S V AL MY +CGEI + F
Sbjct: 518 NETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFF 577
Query: 349 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
D V + V WN +I YG+NG G +A+ ++ MI G P I+F++VL ACSH+GLVE
Sbjct: 578 DAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVE 637
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
G + SM + I P ++HY C+VD LGRA RL++A KL E P++ +W LL S
Sbjct: 638 TGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSS 697
Query: 469 CRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 528
CR+H + LA R + L L+P ++ YVLL++ Y+ + W D +++ LM K + K P
Sbjct: 698 CRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTP 757
Query: 529 GCSW 532
G SW
Sbjct: 758 GQSW 761
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 193/436 (44%), Gaps = 55/436 (12%)
Query: 78 RNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCAR 137
R+ +K + L++ + G+ +H ++V G+ D YL +L+++Y E G D AR
Sbjct: 2 RSGGNKYLASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYAR 61
Query: 138 KVFDETRERTIYIWNAF--FR-----------------------------ALAMVGRGEE 166
KVFDE R +Y WNAF FR L G E+
Sbjct: 62 KVFDEMSVRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEK 121
Query: 167 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMT 226
L +Y++M G RFT VL AC V+ G H ++ G ++NI V
Sbjct: 122 ALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVF----GMRCHGVAVKTGLDKNIFVGN 177
Query: 227 TLLDVYAKFGCI-SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 285
LL +YAK G I Y VF ++ N VS++A+IG A+ + ++A+++F M +
Sbjct: 178 ALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQ 237
Query: 286 SIPNSVTMVSVXXXXXXXXXXXXXXXVHG---------FILRRGLDSIMPVINALITMYG 336
+SV + ++ ++G LR G + + N+L+ +Y
Sbjct: 238 --VDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYA 295
Query: 337 RCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFIT 396
+ +++ E +F ++ +VVSWN +I +G K+++ M G P+ ++ I+
Sbjct: 296 KNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCIS 355
Query: 397 VLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE 456
VL AC +G VE G+ +F S+ P + + M+ +EAI M F+
Sbjct: 356 VLGACFRSGDVETGRRIFSSI-----PQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQ 410
Query: 457 ---PGPTVWGSLLGSC 469
P T +L SC
Sbjct: 411 NLKPDKTTLSVILSSC 426
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 93/194 (47%), Gaps = 7/194 (3%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ + ++ SC++ S GR H +V SG D ++ T L +MY + G +D AR+
Sbjct: 517 PNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQF 576
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FD + IWN GRG+E + LYR+M SG D T+ VL AC S
Sbjct: 577 FDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGL- 635
Query: 200 VYPLQKGKEIHANILR-HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWS 257
++ G EI +++ R HG E + ++D + G + A + A P K +SV W
Sbjct: 636 ---VETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWE 692
Query: 258 AMI-GCYAKNDMPV 270
++ C D+ +
Sbjct: 693 ILLSSCRVHGDVSL 706
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 162/355 (45%), Gaps = 18/355 (5%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T+ V++ SCA+ G+ +H ++ + + ++ ++ + LI +Y E ++ + +
Sbjct: 414 PDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECI 473
Query: 140 FDE-TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGI--PSDRFTYTYVLKACVVS 196
FD+ E I WN+ + L L+R+M+ + + P++ ++ VL +C
Sbjct: 474 FDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNET-SFATVLSSCS-- 530
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 256
+ L G++ H +++ GY + V T L D+Y K G I A F A+ KN+V W
Sbjct: 531 --RLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIW 588
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
+ MI Y N +A+ L+ +M+ + P+ +T VSV + +
Sbjct: 589 NEMIHGYGHNGRGDEAVGLYRKMI--SSGEKPDGITFVSVLTACSHSGLVETGLEILSSM 646
Query: 317 LR-RGLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLISMYGNNGYGKK 374
R G++ + ++ GR G + E++ + V W L+S +G
Sbjct: 647 QRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSCRVHGDVSL 706
Query: 375 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVE-EGKILFESMLSKYRIH--PG 426
A ++ E ++ + P S VL + +++ L + + + +++K R+H PG
Sbjct: 707 ARRVAEKLMR--LDPQS-SAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPG 758
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 252 bits (643), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 241/463 (52%), Gaps = 15/463 (3%)
Query: 76 SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLD-QDPYLATKLINMYHELGSLD 134
++ P T+ ++++C GR VH + + G D D ++ LI+MY + +D
Sbjct: 220 AKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVD 279
Query: 135 CARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACV 194
A +VFDET R I WN+ R +E LE++ M + D T +L+ C
Sbjct: 280 SAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVC- 338
Query: 195 VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 254
+F PL K IH I+R GYE N +++L+D Y + A +V +M K+ V
Sbjct: 339 --KFFEQPL-PCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVV 395
Query: 255 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 314
S S MI A +A+ +F M PN++T++S+ HG
Sbjct: 396 SCSTMISGLAHAGRSDEAISIFCHM-----RDTPNAITVISLLNACSVSADLRTSKWAHG 450
Query: 315 FILRRGLD-SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 373
+RR L + + V +++ Y +CG I + R FD++ +++SW +IS Y NG
Sbjct: 451 IAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPD 510
Query: 374 KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACM 433
KA+ +F+ M +G +P+ ++++ L AC+H GLV++G ++F+SM+ + P ++HY+C+
Sbjct: 511 KALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEEDH-KPSLQHYSCI 569
Query: 434 VDLLGRANRLDEAIKLIEDMP--FEPGPTVWGSLLGSCRIHCNAE-LAERASAMLFELEP 490
VD+L RA +D A++LI+++P + G + WG++L CR + A + ELEP
Sbjct: 570 VDMLSRAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEP 629
Query: 491 WNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 533
+ Y+L + +A K W DV +R+L+ +R ++ V G S +
Sbjct: 630 LCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMV 672
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/325 (30%), Positives = 167/325 (51%), Gaps = 14/325 (4%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T+ ++I +C +S + DG +H Y++ SG + ++ MY + SL ARK+
Sbjct: 125 PNTSTLVLVIHAC--RSLWFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKL 181
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRFTYTYVLKACVVSEF 198
FDE ER + W+ R+ L+L+++M + + D T T VLKAC V E
Sbjct: 182 FDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVME- 240
Query: 199 SVYPLQKGKEIHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
+ G+ +H +R G++ ++ V +L+D+Y+K + A VF +N VSW+
Sbjct: 241 ---DIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSWN 297
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
+++ + N +ALE+FH MV EA + + VT+VS+ +HG I+
Sbjct: 298 SILAGFVHNQRYDEALEMFHLMVQEAVE--VDEVTVVSLLRVCKFFEQPLPCKSIHGVII 355
Query: 318 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
RRG +S +++LI Y C + V D + DVVS +++IS + G +AI
Sbjct: 356 RRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAIS 415
Query: 378 IFENMIHQGVSPSYISFITVLCACS 402
IF H +P+ I+ I++L ACS
Sbjct: 416 IF---CHMRDTPNAITVISLLNACS 437
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 173/395 (43%), Gaps = 39/395 (9%)
Query: 118 YLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS 177
+ + + Y + G L + FD R WN L G EE L + ++
Sbjct: 62 FQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVW 121
Query: 178 GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC 237
G + T V+ AC F G++IH ++R G+ V ++L +YA
Sbjct: 122 GFEPNTSTLVLVIHACRSLWFD------GEKIHGYVIRSGFCGISSVQNSILCMYADSDS 175
Query: 238 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 297
+S A +F M ++ +SWS +I Y ++ PV L+LF +MV EA + P+ VT+ SV
Sbjct: 176 LS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEA-KTEPDCVTVTSVL 233
Query: 298 XXXXXXXXXXXXXXVHGFILRRGLD-SIMPVINALITMYGRCGEISIGERVFDKVKNPDV 356
VHGF +RRG D + + V N+LI MY + ++ RVFD+ ++
Sbjct: 234 KACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNI 293
Query: 357 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS-----------HAG 405
VSWNS+++ + +N +A+++F M+ + V ++ +++L C H
Sbjct: 294 VSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGV 353
Query: 406 LVEEG----KILFESMLSKYR---------------IHPGMEHYACMVDLLGRANRLDEA 446
++ G ++ S++ Y + + + M+ L A R DEA
Sbjct: 354 IIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEA 413
Query: 447 IKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA 481
I + M P SLL +C + + ++ A
Sbjct: 414 ISIFCHMRDTPNAITVISLLNACSVSADLRTSKWA 448
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 251 bits (640), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 243/456 (53%), Gaps = 14/456 (3%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
GR H ++ + + + L+ MY GS+ + VF RER + WN A
Sbjct: 337 GRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQ 396
Query: 161 VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE- 219
G +E L L +M G D T T +L A ++ + GK+ HA ++R G +
Sbjct: 397 NGLDDEGLMLVYEMQKQGFKIDYITVTALLSAAS----NLRNKEIGKQTHAFLIRQGIQF 452
Query: 220 ENIHVMTTLLDVYAKFGCISYANSVFRA--MPAKNSVSWSAMIGCYAKNDMPVKALELFH 277
E ++ + L+D+Y+K G I + +F ++ +W++MI Y +N K +F
Sbjct: 453 EGMN--SYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFR 510
Query: 278 QMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR 337
+M+ + PN+VT+ S+ +HGF +R+ LD + V +AL+ MY +
Sbjct: 511 KMLEQNIR--PNAVTVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSK 568
Query: 338 CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
G I E +F + K + V++ ++I YG +G G++AI +F +M G+ P I+F+ V
Sbjct: 569 AGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAV 628
Query: 398 LCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEP 457
L ACS++GL++EG +FE M Y I P EHY C+ D+LGR R++EA + ++ + E
Sbjct: 629 LSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEG 688
Query: 458 G-PTVWGSLLGSCRIHCNAELAERASAMLFELEPWN--AGNYVLLADIYAEAKMWSDVKS 514
+WGSLLGSC++H ELAE S L + + +G VLL+++YAE + W V
Sbjct: 689 NIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDK 748
Query: 515 VRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
VR+ M ++ L+K G S IE+ + FVS ++++P
Sbjct: 749 VRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHP 784
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 178/395 (45%), Gaps = 22/395 (5%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHE-LGSLDC-----AR 137
T +++CA+ + G+ VH +L+ + + L+NMY L + DC R
Sbjct: 109 TYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 138 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
KVFD R + + WN GR E + M + ++ V A +S
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 198 FSVYPLQKGKEIHANILRHG--YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 255
++K + +L+ G Y +++ V+++ + +YA+ G I + VF + +N
Sbjct: 229 ----SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEV 284
Query: 256 WSAMIGCYAKNDMPVKALELFHQMVLEACDS---IPNSVTMVSVXXXXXXXXXXXXXXXV 312
W+ MIG Y +ND V+++ELF LEA S + + VT +
Sbjct: 285 WNTMIGVYVQNDCLVESIELF----LEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQF 340
Query: 313 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 372
HGF+ + + + ++N+L+ MY RCG + VF ++ DVVSWN++IS + NG
Sbjct: 341 HGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLD 400
Query: 373 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 432
+ + + M QG YI+ +L A S+ E GK ++ + GM Y
Sbjct: 401 DEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGMNSY-- 458
Query: 433 MVDLLGRANRLDEAIKLIEDMPF-EPGPTVWGSLL 466
++D+ ++ + + KL E + E W S++
Sbjct: 459 LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMI 493
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 142/317 (44%), Gaps = 19/317 (5%)
Query: 115 QDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM 174
Q P + ++L + + G+ AR++FD + T +WN E L Y +M
Sbjct: 38 QTPSIRSRLSKICQD-GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRM 96
Query: 175 NWSG--IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+ D +TY+ LKAC ++ L+ GK +H +++R + V +L+++Y
Sbjct: 97 KKTAPFTNCDAYTYSSTLKACAETK----NLKAGKAVHCHLIRCLQNSSRVVHNSLMNMY 152
Query: 233 AKF----GCISY--ANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS 286
C Y VF M KN V+W+ +I Y K +A F M+ +
Sbjct: 153 VSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMM--RMEV 210
Query: 287 IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI--MPVINALITMYGRCGEISIG 344
P+ V+ V+V +G +L+ G + + + V+++ I+MY G+I
Sbjct: 211 KPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESS 270
Query: 345 ERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF-ENMIHQGVSPSYISFITVLCACSH 403
RVFD ++ WN++I +Y N ++I++F E + + + ++++ A S
Sbjct: 271 RRVFDSCVERNIEVWNTMIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSA 330
Query: 404 AGLVEEGKILFESMLSK 420
VE G+ F +SK
Sbjct: 331 LQQVELGR-QFHGFVSK 346
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 22/241 (9%)
Query: 241 ANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXX 300
A +F A+P +V W+ +I + N++P +AL + +M A + ++ T S
Sbjct: 58 ARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKAC 117
Query: 301 XXXXXXXXXXXVHGFILRRGLDSIMPVINALITMY------GRCGEISIGERVFDKVKNP 354
VH ++R +S V N+L+ MY C E + +VFD ++
Sbjct: 118 AETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRK 177
Query: 355 DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILF 414
+VV+WN+LIS Y G +A + F M+ V PS +SF+ V A S + +++ + +
Sbjct: 178 NVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFY 237
Query: 415 ESML--------SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
ML + + + YA + D+ E+ + + D E VW +++
Sbjct: 238 GLMLKLGDEYVKDLFVVSSAISMYAELGDI--------ESSRRVFDSCVERNIEVWNTMI 289
Query: 467 G 467
G
Sbjct: 290 G 290
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/373 (35%), Positives = 211/373 (56%), Gaps = 8/373 (2%)
Query: 178 GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC 237
G D + + +++C ++ + G H L+ G+ ++++ ++L+ +Y G
Sbjct: 115 GWSFDAYGLSSAVRSCGLNR----DFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 238 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 297
+ A VF MP +N VSW+AMI +A+ L+L+ +M D PN T ++
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSD--PNDYTFTALL 228
Query: 298 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 357
VH L GL S + + N+LI+MY +CG++ R+FD+ N DVV
Sbjct: 229 SACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVV 288
Query: 358 SWNSLISMYGNNGYGKKAIQIFENMI-HQGVSPSYISFITVLCACSHAGLVEEGKILFES 416
SWNS+I+ Y +G +AI++FE M+ G P I+++ VL +C HAGLV+EG+ F +
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFF-N 347
Query: 417 MLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAE 476
+++++ + P + HY+C+VDLLGR L EA++LIE+MP +P +WGSLL SCR+H +
Sbjct: 348 LMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVW 407
Query: 477 LAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVK 536
RA+ LEP A +V LA++YA W + +VRKLM + L+ PGCSWIE+
Sbjct: 408 TGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEIN 467
Query: 537 KKIYSFVSSEEDN 549
++ F + + N
Sbjct: 468 NYVFMFKAEDGSN 480
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 130/276 (47%), Gaps = 6/276 (2%)
Query: 89 IQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTI 148
++SC F G H + G D YL + L+ +Y + G ++ A KVF+E ER +
Sbjct: 127 VRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNV 186
Query: 149 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 208
W A A R + L+LY +M S + +T+T +L AC S L +G+
Sbjct: 187 VSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSG----ALGQGRS 242
Query: 209 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 268
+H L G + +H+ +L+ +Y K G + A +F K+ VSW++MI YA++ +
Sbjct: 243 VHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGL 302
Query: 269 PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI 328
++A+ELF ++++ + P+++T + V + GL +
Sbjct: 303 AMQAIELF-ELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHY 361
Query: 329 NALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLI 363
+ L+ + GR G + + + + P+ V W SL+
Sbjct: 362 SCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLL 397
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 76 SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDC 135
S +P+ T L+ +C + GR VH + GL +++ LI+MY + G L
Sbjct: 215 STSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKD 274
Query: 136 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR-QMNWSGIPSDRFTYTYVLKACV 194
A ++FD+ + + WN+ A G + +EL+ M SG D TY VL +C
Sbjct: 275 AFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCR 334
Query: 195 VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NS 253
+ +++G++ + HG + ++ + L+D+ +FG + A + MP K NS
Sbjct: 335 HAGL----VKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNS 390
Query: 254 VSWSAMI 260
V W +++
Sbjct: 391 VIWGSLL 397
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 150/496 (30%), Positives = 263/496 (53%), Gaps = 15/496 (3%)
Query: 57 LIQSLCRGGNHKQALEV--LWSERN--PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI L + K+A+E+ L N P T+ + ++ + S + + H V G
Sbjct: 136 LIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILG 195
Query: 113 LD-QDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
L+ + ++ + L++MY + G A+ V D E+ + + A + G E ++ +
Sbjct: 196 LEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAF 255
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
+ M + + +TY VL +C ++ + GK IH +++ G+E + T+LL +
Sbjct: 256 QSMLVEKVQPNEYTYASVLISC----GNLKDIGNGKLIHGLMVKSGFESALASQTSLLTM 311
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNS 290
Y + + + VF+ + N VSW+++I +N AL F +M+ DSI PNS
Sbjct: 312 YLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMR---DSIKPNS 368
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK 350
T+ S +HG + + G D + LI +YG+CG + VFD
Sbjct: 369 FTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDT 428
Query: 351 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
+ DV+S N++I Y NG+G++A+ +FE MI+ G+ P+ ++ ++VL AC+++ LVEEG
Sbjct: 429 LSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEG 488
Query: 411 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCR 470
LF+S K +I +HYACMVDLLGRA RL+EA L ++ P +W +LL +C+
Sbjct: 489 CELFDS-FRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEV-INPDLVLWRTLLSACK 546
Query: 471 IHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGC 530
+H E+AER + + E+EP + G +L++++YA W+ V ++ M L+K P
Sbjct: 547 VHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAM 606
Query: 531 SWIEVKKKIYSFVSSE 546
SW+E+ K+ ++F++ +
Sbjct: 607 SWVEINKETHTFMAGD 622
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 174/361 (48%), Gaps = 11/361 (3%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
L++ C + S S + + +++ SG + +KL++ + G +D AR+VFD ER
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPAEIS-GSKLVDASLKCGDIDYARQVFDGMSERH 129
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQK-G 206
I WN+ L R +E +E+YR M + + D +T + V KA FS L+K
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKA-----FSDLSLEKEA 184
Query: 207 KEIHANILRHGYE-ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 265
+ H + G E N+ V + L+D+Y KFG A V + K+ V +A+I Y++
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 266 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 325
+A++ F M++E PN T SV +HG +++ G +S +
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQ--PNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESAL 302
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
+L+TMY RC + RVF ++ P+ VSW SLIS NG + A+ F M+
Sbjct: 303 ASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD 362
Query: 386 GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDE 445
+ P+ + + L CS+ + EEG+ + +++KY + ++DL G+ D
Sbjct: 363 SIKPNSFTLSSALRGCSNLAMFEEGRQI-HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDM 421
Query: 446 A 446
A
Sbjct: 422 A 422
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 250 bits (639), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/464 (30%), Positives = 248/464 (53%), Gaps = 8/464 (1%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T + L+++C + S + V+ +++ +G + + Y+ +++ M+ + G + AR++FDE
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTY-VLKACVVSEFSVYP 202
ER +Y + + G E EL++ M W + SD T+T+ V+ S+Y
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMM-WEEL-SDCETHTFAVMLRASAGLGSIYV 242
Query: 203 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 262
GK++H L+ G +N V L+D+Y+K G I A F MP K +V+W+ +I
Sbjct: 243 ---GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAG 299
Query: 263 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 322
YA + +AL L + M ++ SI + T+ + H ++R G +
Sbjct: 300 YALHGYSEEALCLLYDM-RDSGVSI-DQFTLSIMIRISTKLAKLELTKQAHASLIRNGFE 357
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
S + AL+ Y + G + VFDK+ +++SWN+L+ Y N+G G A+++FE M
Sbjct: 358 SEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKM 417
Query: 383 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANR 442
I V+P++++F+ VL AC+++GL E+G +F SM + I P HYACM++LLGR
Sbjct: 418 IAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGL 477
Query: 443 LDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADI 502
LDEAI I P + +W +LL +CR+ N EL + L+ + P GNYV++ ++
Sbjct: 478 LDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNM 537
Query: 503 YAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 546
Y ++ V + + + L +P C+W+EV + +SF+S +
Sbjct: 538 YNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGD 581
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/476 (28%), Positives = 248/476 (52%), Gaps = 19/476 (3%)
Query: 82 HKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFD 141
H + +I +C ++ R +H + G + + L++ Y + G L+ + VF
Sbjct: 276 HVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFH 335
Query: 142 ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVY 201
+ ER + W + ++ + ++ M + G+ + T+ ++ A +E
Sbjct: 336 QMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNE---- 386
Query: 202 PLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 261
+++G +IH ++ G+ V + + +YAKF + A F + + +SW+AMI
Sbjct: 387 QIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMIS 446
Query: 262 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXX--XXXXXXXVHGFILRR 319
+A+N +AL++F + A +++PN T SV H +L+
Sbjct: 447 GFAQNGFSHEALKMF---LSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL 503
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
GL+S V +AL+ MY + G I E+VF+++ + W S+IS Y ++G + + +F
Sbjct: 504 GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLF 563
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 439
MI + V+P ++F++VL AC+ G+V++G +F M+ Y + P EHY+CMVD+LGR
Sbjct: 564 HKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGR 623
Query: 440 ANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLL 499
A RL EA +L+ ++P PG ++ S+LGSCR+H N ++ + + + E++P +G+YV +
Sbjct: 624 AGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQM 683
Query: 500 ADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKK-----KIYSFVSSEEDNP 550
+IYAE + W +RK M K+ + K G SWI+V + F S ++ +P
Sbjct: 684 YNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHP 739
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 185/396 (46%), Gaps = 17/396 (4%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T + C F G + +V +GL+ D + I MY GS AR+VFDE
Sbjct: 176 TYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEM 235
Query: 144 RERTIYIWNAFFRALAMVGR-GEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYP 202
+ + WN+ L+ G G E + ++R M G+ D ++T V+ C
Sbjct: 236 SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHET----D 291
Query: 203 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGC 262
L+ ++IH ++ GYE + V L+ Y+K G + SVF M +N VSW+ MI
Sbjct: 292 LKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS 351
Query: 263 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 322
K+D A+ +F M + PN VT V + +HG ++ G
Sbjct: 352 -NKDD----AVSIFLNMRFDGV--YPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFV 404
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
S V N+ IT+Y + + ++ F+ + +++SWN++IS + NG+ +A+++F +
Sbjct: 405 SEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSA 464
Query: 383 IHQGVSPSYISFITVLCACSHAG--LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRA 440
+ + P+ +F +VL A + A V++G+ +L K ++ + ++D+ +
Sbjct: 465 AAETM-PNEYTFGSVLNAIAFAEDISVKQGQRCHAHLL-KLGLNSCPVVSSALLDMYAKR 522
Query: 441 NRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAE 476
+DE+ K+ +M + VW S++ + H + E
Sbjct: 523 GNIDESEKVFNEMS-QKNQFVWTSIISAYSSHGDFE 557
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 185/390 (47%), Gaps = 20/390 (5%)
Query: 68 KQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMY 127
K+ L++ + R+ T+ + +++C + G +H + SG ++ ++ MY
Sbjct: 64 KENLQLGYFGRHMDEVTLCLALKAC--RGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMY 121
Query: 128 HELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYT 187
+ G D A +F+ + + WN L+ + L +M +G+ D FTY+
Sbjct: 122 RKAGRFDNALCIFENLVDPDVVSWNTI---LSGFDDNQIALNFVVRMKSAGVVFDAFTYS 178
Query: 188 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 247
L CV SE + LQ + + +++ G E ++ V + + +Y++ G A VF
Sbjct: 179 TALSFCVGSEGFLLGLQ----LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDE 234
Query: 248 MPAKNSVSWSAMI-GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 306
M K+ +SW++++ G + +A+ +F M+ E + + V+ SV
Sbjct: 235 MSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVE--LDHVSFTSVITTCCHETDL 292
Query: 307 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMY 366
+HG ++RG +S++ V N L++ Y +CG + + VF ++ +VVSW ++IS
Sbjct: 293 KLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSN 352
Query: 367 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG-KILFESMLSKYRIHP 425
++ A+ IF NM GV P+ ++F+ ++ A ++EG KI + + + P
Sbjct: 353 KDD-----AVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEP 407
Query: 426 GMEHYACMVDLLGRANRLDEAIKLIEDMPF 455
+ + + L + L++A K ED+ F
Sbjct: 408 SVGN--SFITLYAKFEALEDAKKAFEDITF 435
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 143/323 (44%), Gaps = 11/323 (3%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T LI + +G +H + +G +P + I +Y + +L+ A+K
Sbjct: 370 PNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKA 429
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F++ R I WNA A G E L+++ +P++ +T+ VL A +E
Sbjct: 430 FEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETMPNE-YTFGSVLNAIAFAE-- 486
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
+++G+ HA++L+ G V + LLD+YAK G I + VF M KN W+++
Sbjct: 487 DISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSI 546
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR- 318
I Y+ + + LFH+M+ E + P+ VT +SV + ++
Sbjct: 547 ISAYSSHGDFETVMNLFHKMIKE--NVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEV 604
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKV-KNPDVVSWNSLIS---MYGNNGYGKK 374
L+ + ++ M GR G + E + +V P S++ ++GN G K
Sbjct: 605 YNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAK 664
Query: 375 AIQIFENMIHQGVSPSYISFITV 397
++ M + +S SY+ +
Sbjct: 665 VAELAMEMKPE-LSGSYVQMYNI 686
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 16/273 (5%)
Query: 136 ARKVFDETRER--TIYIWNAFFRALAMV--GRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
A K+FD + +R T I ++ +L R + + Q+ + G D T LK
Sbjct: 27 AHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLALK 86
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 251
AC L++G +IH G+ + V ++ +Y K G A +F +
Sbjct: 87 ACR------GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDP 140
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
+ VSW+ ++ + N + AL +M ++ + ++ T +
Sbjct: 141 DVVSWNTILSGFDDNQI---ALNFVVRM--KSAGVVFDAFTYSTALSFCVGSEGFLLGLQ 195
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG- 370
+ +++ GL+S + V N+ ITMY R G RVFD++ D++SWNSL+S G
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 371 YGKKAIQIFENMIHQGVSPSYISFITVLCACSH 403
+G +A+ IF +M+ +GV ++SF +V+ C H
Sbjct: 256 FGFEAVVIFRDMMREGVELDHVSFTSVITTCCH 288
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 142/465 (30%), Positives = 237/465 (50%), Gaps = 9/465 (1%)
Query: 83 KTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDE 142
KT L+ ++ ++ + +H + G D + L+ Y +L ++ ARK+FDE
Sbjct: 30 KTKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDE 89
Query: 143 TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG-IPSDRFTYTYVLKACVVSEFSVY 201
E + W + +G+ + L ++++M+ +P + +T+ V KAC ++
Sbjct: 90 MCEPNVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACS----ALA 145
Query: 202 PLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA--KNSVSWSAM 259
+ GK IHA + G NI V ++L+D+Y K + A VF +M +N VSW++M
Sbjct: 146 ESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSM 205
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I YA+N +A+ELF N + SV HG + R
Sbjct: 206 ITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRG 265
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
G +S V +L+ MY +CG +S E++F +++ V+S+ S+I +G G+ A+++F
Sbjct: 266 GYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLF 325
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 439
+ M+ ++P+Y++ + VL ACSH+GLV EG M KY + P HY C+VD+LGR
Sbjct: 326 DEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGR 385
Query: 440 ANRLDEAIKLIE--DMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYV 497
R+DEA +L + ++ E G +WG+LL + R+H E+ AS L + Y+
Sbjct: 386 FGRVDEAYELAKTIEVGAEQGALLWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYI 445
Query: 498 LLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSF 542
L++ YA + W D +S+R M + K CSWIE K +Y F
Sbjct: 446 ALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVF 490
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 157/493 (31%), Positives = 255/493 (51%), Gaps = 13/493 (2%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSD-GRDVHRY-LVD 110
+I S C+ G +A+ E+ + P + + L+ C + S S R H LVD
Sbjct: 119 IINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVD 178
Query: 111 SGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLEL 170
+ + L+T L++MY + A VFD+ + W A E ++L
Sbjct: 179 ERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDL 238
Query: 171 YRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLD 230
+R M + +R T VL ACV E + Y KEIH RHG + + +
Sbjct: 239 FRAMQRENLRPNRVTLLSVLPACV--ELN-YGSSLVKEIHGFSFRHGCHADERLTAAFMT 295
Query: 231 VYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
+Y + G +S + +F ++ V WS+MI YA+ + + L +QM E ++ NS
Sbjct: 296 MYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEA--NS 353
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK 350
VT++++ VH IL+ G S + + NALI MY +CG +S VF +
Sbjct: 354 VTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYE 413
Query: 351 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
+ D+VSW+S+I+ YG +G+G +A++IF+ MI G ++F+ +L AC+HAGLVEE
Sbjct: 414 LTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEA 473
Query: 411 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCR 470
+ +F + KY + +EHYAC ++LLGR ++D+A ++ +MP +P +W SLL +C
Sbjct: 474 QTIF-TQAGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACE 532
Query: 471 IHCNAELAERASA-MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPG 529
H ++A + A L + EP N NYVLL+ I+ E+ + + VR++M +R L K G
Sbjct: 533 THGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYG 592
Query: 530 CSWIEVKKKIYSF 542
S IE + +I +
Sbjct: 593 FSKIEPELQIEDY 605
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 185/394 (46%), Gaps = 22/394 (5%)
Query: 88 LIQSCA-QKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRER 146
+I++CA Q+ F G +H + +G D D ++ LI+MY + RKVFDE R
Sbjct: 52 VIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHR 111
Query: 147 TIYIWNAFFRALAMVGRGEELLELYRQMNWSG-IPSDRFTYTYVLKACVVSEFSVYPLQK 205
+ + + G E ++L ++M + G IP + +L C S +
Sbjct: 112 DTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVAS-LLALCTRMGSSS---KV 167
Query: 206 GKEIHANIL-RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI-GCY 263
+ HA +L +E++ + T L+D+Y KF + A VF M KN VSW+AMI GC
Sbjct: 168 ARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCV 227
Query: 264 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX-XXXXXXXXXXXXXXVHGFILRRGLD 322
A + + ++LF M E + PN VT++SV +HGF R G
Sbjct: 228 ANQNYEM-GVDLFRAMQRE--NLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCH 284
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
+ + A +TMY RCG +S+ +F+ K DVV W+S+IS Y G + + + M
Sbjct: 285 ADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQM 344
Query: 383 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG-MEHYA---CMVDLLG 438
+G+ + ++ + ++ AC+++ L+ F S + + G M H ++D+
Sbjct: 345 RKEGIEANSVTLLAIVSACTNSTLLS-----FASTVHSQILKCGFMSHILLGNALIDMYA 399
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
+ L A ++ ++ E W S++ + +H
Sbjct: 400 KCGSLSAAREVFYELT-EKDLVSWSSMINAYGLH 432
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 247 bits (631), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 143/465 (30%), Positives = 239/465 (51%), Gaps = 47/465 (10%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T+ V+ ++C + +G +H + L+ D +L L++MY +LG + A+ VF
Sbjct: 277 TLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVM 336
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
+ + WN+ L + E EL+ +M
Sbjct: 337 KNKDSVSWNSLITGLVQRKQISEAYELFEKM----------------------------- 367
Query: 204 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 263
GK++ + T ++ ++ G IS +F MP K++++W+AMI +
Sbjct: 368 -PGKDMVS-------------WTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAF 413
Query: 264 AKNDMPVKALELFHQMVL-EACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 322
N +AL FH+M+ E C PNS T SV +HG +++ +
Sbjct: 414 VSNGYYEEALCWFHKMLQKEVC---PNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIV 470
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
+ + V N+L++MY +CG + ++F + P++VS+N++IS Y NG+GKKA+++F +
Sbjct: 471 NDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSML 530
Query: 383 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANR 442
G P+ ++F+ +L AC H G V+ G F+SM S Y I PG +HYACMVDLLGR+
Sbjct: 531 ESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGL 590
Query: 443 LDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADI 502
LD+A LI MP +P VWGSLL + + H +LAE A+ L ELEP +A YV+L+ +
Sbjct: 591 LDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQL 650
Query: 503 YAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEE 547
Y+ D + + + ++K PG SWI +K ++++F++ +E
Sbjct: 651 YSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDE 695
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 129/290 (44%), Gaps = 47/290 (16%)
Query: 121 TKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG-I 179
+ +++ Y ++G + AR +FD ER + W A G E+ L+ +M G +
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 180 PSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS 239
+ T + KAC +F Y ++G +IH + R E ++ + +L+ +Y+K G +
Sbjct: 272 KVNSNTLAVMFKAC--RDFVRY--REGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMG 327
Query: 240 YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX 299
A +VF M K+SVSW+++I + +A ELF +M
Sbjct: 328 EAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM-------------------- 367
Query: 300 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 359
G D M +I + GEIS +F + D ++W
Sbjct: 368 -------------------PGKD--MVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITW 406
Query: 360 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA-CSHAGLVE 408
++IS + +NGY ++A+ F M+ + V P+ +F +VL A S A L+E
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIE 456
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 122/289 (42%), Gaps = 37/289 (12%)
Query: 123 LINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM----VGRGEELL--------EL 170
+I+ Y E G + A +VFDE R +NA A+ +G+ EL
Sbjct: 87 MISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEKNAVS 146
Query: 171 YRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY------EENIHV 224
Y M + + RF L ++ P++ + +N+L GY E + V
Sbjct: 147 YATMITGFVRAGRFDEAEFL-------YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRV 199
Query: 225 M-----------TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKAL 273
++++ Y K G I A S+F M +N ++W+AMI Y K
Sbjct: 200 FQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGF 259
Query: 274 ELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 333
LF +M E D NS T+ + +HG + R L+ + + N+L++
Sbjct: 260 GLFLRMRQEG-DVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMS 318
Query: 334 MYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
MY + G + + VF +KN D VSWNSLI+ +A ++FE M
Sbjct: 319 MYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKM 367
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 105/231 (45%), Gaps = 9/231 (3%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + G +++AL ++L E P+ T ++ + A + +G +H +V
Sbjct: 409 MISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMN 468
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ D + L++MY + G+ + A K+F E I +N + G G++ L+L+
Sbjct: 469 IVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFS 528
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+ SG + T+ +L ACV + + K + ++ + E ++D+
Sbjct: 529 MLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSS---YNIEPGPDHYACMVDLL 585
Query: 233 AKFGCISYANSVFRAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLE 282
+ G + A+++ MP K +S W +++ +K + V EL + ++E
Sbjct: 586 GRSGLLDDASNLISTMPCKPHSGVWGSLLSA-SKTHLRVDLAELAAKKLIE 635
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 67/140 (47%), Gaps = 12/140 (8%)
Query: 329 NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 388
N+ I+ + R G + E +F ++ N +VSW ++IS Y NG KA Q+F+ M + V+
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVR-VT 112
Query: 389 PSYISFITVLC--ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 446
SY + IT + C E LF + K + YA M+ RA R DEA
Sbjct: 113 TSYNAMITAMIKNKCDLGKAYE----LFCDIPEKNAV-----SYATMITGFVRAGRFDEA 163
Query: 447 IKLIEDMPFEPGPTVWGSLL 466
L + P + +V ++L
Sbjct: 164 EFLYAETPVKFRDSVASNVL 183
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 104/250 (41%), Gaps = 20/250 (8%)
Query: 213 ILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV-K 271
I R +I ++ YA+ G +S A VF MP + + S++AMI KN + K
Sbjct: 72 IFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTTSYNAMITAMIKNKCDLGK 131
Query: 272 ALELFHQMVLEACDSIP--NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 329
A ELF CD IP N+V+ ++ ++ + DS+ N
Sbjct: 132 AYELF-------CD-IPEKNAVSYATMITGFVRAGRFDEAEFLYAETPVKFRDSVAS--N 181
Query: 330 ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 389
L++ Y R G+ + RVF + +VVS +S++ Y G A +F+ M + V
Sbjct: 182 VLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTERNV-- 239
Query: 390 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK- 448
I++ ++ AG E+G LF M + + A M R E +
Sbjct: 240 --ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQI 297
Query: 449 --LIEDMPFE 456
L+ MP E
Sbjct: 298 HGLVSRMPLE 307
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 247 bits (630), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 149/464 (32%), Positives = 237/464 (51%), Gaps = 39/464 (8%)
Query: 103 DVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVG 162
++H +L+ L L I++ L + D A +VF + + ++NA + ++VG
Sbjct: 22 EIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFNAMIKCYSLVG 81
Query: 163 RGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENI 222
E L + M GI +D +TY +LK+C S+ L+ GK +H ++R G+
Sbjct: 82 PPLESLSFFSSMKSRGIWADEYTYAPLLKSCS----SLSDLRFGKCVHGELIRTGFHRLG 137
Query: 223 HVMTTLLDVYAKFGCISYANSVFRAMPAKNSV---------------------------- 254
+ ++++Y G + A VF M +N V
Sbjct: 138 KIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSER 197
Query: 255 ---SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
SW++MI +K +ALELF +M+ + D P+ T+V+V
Sbjct: 198 SIVSWNSMISSLSKCGRDREALELFCEMIDQGFD--PDEATVVTVLPISASLGVLDTGKW 255
Query: 312 VHGFILRRGL-DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNG 370
+H GL + V NAL+ Y + G++ +F K++ +VVSWN+LIS NG
Sbjct: 256 IHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNG 315
Query: 371 YGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
G+ I +F+ MI +G V+P+ +F+ VL CS+ G VE G+ LF M+ ++++ EH
Sbjct: 316 KGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEH 375
Query: 430 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
Y MVDL+ R+ R+ EA K +++MP +WGSLL +CR H + +LAE A+ L ++E
Sbjct: 376 YGAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIE 435
Query: 490 PWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 533
P N+GNYVLL+++YAE W DV+ VR LM K L+K G S I
Sbjct: 436 PGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 133/322 (41%), Gaps = 39/322 (12%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
L++SC+ S G+ VH L+ +G + + ++ +Y G + A+KVFDE ER
Sbjct: 108 LLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERN 167
Query: 148 IYIWNAFFR-------------------------------ALAMVGRGEELLELYRQMNW 176
+ +WN R +L+ GR E LEL+ +M
Sbjct: 168 VVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMID 227
Query: 177 SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKF 235
G D T VL S+ L GK IH+ G +++ I V L+D Y K
Sbjct: 228 QGFDPDEATVVTVLPISA----SLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKS 283
Query: 236 GCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVS 295
G + A ++FR M +N VSW+ +I A N ++LF M+ E PN T +
Sbjct: 284 GDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEG-KVAPNEATFLG 342
Query: 296 VXXXXXXXXXXXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIGERVFDKVK-N 353
V + G ++ R L++ A++ + R G I+ + + N
Sbjct: 343 VLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPVN 402
Query: 354 PDVVSWNSLISMYGNNGYGKKA 375
+ W SL+S ++G K A
Sbjct: 403 ANAAMWGSLLSACRSHGDVKLA 424
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 238/465 (51%), Gaps = 41/465 (8%)
Query: 117 PYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW 176
P L KL Y G + + +F +T + ++++ A ++ G ++ LY Q+
Sbjct: 64 PVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLS 123
Query: 177 SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG 236
S I + FT++ +LK+C + GK IH ++L+ G + +V T L+DVYAK G
Sbjct: 124 SEINPNEFTFSSLLKSCST--------KSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGG 175
Query: 237 CISYANSVFRAMPAKNSVSWSAMIGCYAK------------------------------- 265
+ A VF MP ++ VS +AMI CYAK
Sbjct: 176 DVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQ 235
Query: 266 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 325
+ P AL LF +++ E P+ +T+V+ +H F+ + +
Sbjct: 236 HGFPNDALMLFQKLLAEG-KPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNV 294
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH- 384
V LI MY +CG + VF+ D+V+WN++I+ Y +GY + A+++F M
Sbjct: 295 KVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGI 354
Query: 385 QGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLD 444
G+ P+ I+FI L AC+HAGLV EG +FESM +Y I P +EHY C+V LLGRA +L
Sbjct: 355 TGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLK 414
Query: 445 EAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYA 504
A + I++M + +W S+LGSC++H + L + + L L N+G YVLL++IYA
Sbjct: 415 RAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYA 474
Query: 505 EAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDN 549
+ V VR LM ++ + K PG S IE++ K++ F + + ++
Sbjct: 475 SVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREH 519
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 155/345 (44%), Gaps = 54/345 (15%)
Query: 71 LEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL 130
+++L SE NP+ T L++SC+ KS G+ +H +++ GL DPY+AT L+++Y +
Sbjct: 119 VQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYVATGLVDVYAKG 174
Query: 131 GSLDCARKVFDETRERT-------------------------------IYIWNAFFRALA 159
G + A+KVFD ER+ I WN A
Sbjct: 175 GDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYA 234
Query: 160 MVGRGEELLELYRQMNWSGIPS-DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY 218
G + L L++++ G P D T L AC + L+ G+ IH +
Sbjct: 235 QHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACS----QIGALETGRWIHVFVKSSRI 290
Query: 219 EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 278
N+ V T L+D+Y+K G + A VF P K+ V+W+AMI YA + AL LF++
Sbjct: 291 RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNE 350
Query: 279 MVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR-GLDSIMPVINALITMYG 336
M + + P +T + + + + G+ + L+++ G
Sbjct: 351 M--QGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLG 408
Query: 337 RCGEISIGERVFDKVKN----PDVVSWNSLIS---MYGNNGYGKK 374
R G++ +R ++ +KN D V W+S++ ++G+ GK+
Sbjct: 409 RAGQL---KRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKE 450
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 246 bits (627), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 144/498 (28%), Positives = 246/498 (49%), Gaps = 10/498 (2%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I L G +K+ L E+ SE T + +++CA G+ +H +++ G
Sbjct: 180 IITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG 239
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+A L MY E G + +F+ ER + W + A +G+ + +E +
Sbjct: 240 FVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFI 299
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+M S +P + T+ + AC S+ L G+++H N+L G +++ V +++ +Y
Sbjct: 300 KMRNSQVPPNEQTFASMFSACA----SLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMY 355
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
+ G + A+ +F+ M ++ +SWS +IG Y + + + F M + P
Sbjct: 356 STCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWM--RQSGTKPTDFA 413
Query: 293 MVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK 352
+ S+ VH L GL+ V ++LI MY +CG I +F +
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 353 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 412
D+VS ++I+ Y +G K+AI +FE + G P ++FI+VL AC+H+G ++ G
Sbjct: 474 RDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLGFH 533
Query: 413 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
F M Y + P EHY CMVDLL RA RL +A K+I +M ++ VW +LL +C+
Sbjct: 534 YFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLLIACKAK 593
Query: 473 CNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSW 532
+ E RA+ + EL+P A V LA+IY+ + +VRK M + + K PG S
Sbjct: 594 GDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSS 653
Query: 533 IEVKKKIYSFVSSEEDNP 550
I++K + +FVS + +P
Sbjct: 654 IKIKDCVSAFVSGDRFHP 671
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 165/342 (48%), Gaps = 6/342 (1%)
Query: 70 ALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHE 129
A+ V+ +P + V++++C Q S+ + G +H Y V + L Y+ + L++MY
Sbjct: 96 AMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKR 155
Query: 130 LGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV 189
+G +D + +VF E R W A L GR +E L + +M+ S SD +T+
Sbjct: 156 VGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIA 215
Query: 190 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
LKAC + ++ GK IH +++ G+ + V +L +Y + G + +F M
Sbjct: 216 LKACA----GLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS 271
Query: 250 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 309
++ VSW+++I Y + VKA+E F +M PN T S+
Sbjct: 272 ERDVVSWTSLIVAYKRIGQEVKAVETFIKM--RNSQVPPNEQTFASMFSACASLSRLVWG 329
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 369
+H +L GL+ + V N+++ MY CG + +F ++ D++SW+++I Y
Sbjct: 330 EQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQA 389
Query: 370 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
G+G++ + F M G P+ + ++L + ++E G+
Sbjct: 390 GFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGR 431
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 177/413 (42%), Gaps = 18/413 (4%)
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW--SGIPSDRFTYTY 188
G+L AR+VFD+ I W + + +E L L+ M + D +
Sbjct: 54 GNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSV 113
Query: 189 VLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM 248
VLKAC S Y G+ +HA ++ +++V ++LLD+Y + G I + VF M
Sbjct: 114 VLKACGQSSNIAY----GESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEM 169
Query: 249 PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 308
P +N+V+W+A+I + L F +M + + ++ T
Sbjct: 170 PFRNAVTWTAIITGLVHAGRYKEGLTYFSEM--SRSEELSDTYTFAIALKACAGLRQVKY 227
Query: 309 XXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGN 368
+H ++ RG + + V N+L TMY CGE+ G +F+ + DVVSW SLI Y
Sbjct: 228 GKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKR 287
Query: 369 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 428
G KA++ F M + V P+ +F ++ AC+ + G+ L ++LS ++ +
Sbjct: 288 IGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLS-LGLNDSLS 346
Query: 429 HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFEL 488
M+ + L A L + M W +++G +C A E F+
Sbjct: 347 VSNSMMKMYSTCGNLVSASVLFQGMRCRD-IISWSTIIGG---YCQAGFGEEG----FKY 398
Query: 489 EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYS 541
W + D +A A + S ++ + G R + + C +E + S
Sbjct: 399 FSWMRQSGTKPTD-FALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRS 450
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/453 (31%), Positives = 232/453 (51%), Gaps = 9/453 (1%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T LI +C + S+ G+ H LV SG++ L T L++MY + G + AR+VF+E
Sbjct: 244 TYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEH 303
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
+ +W A G E L L+++M I + T VL C + E L
Sbjct: 304 SHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIE----NL 359
Query: 204 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 263
+ G+ +H ++ G + +V L+ +YAK A VF K+ V+W+++I +
Sbjct: 360 ELGRSVHGLSIKVGIWDT-NVANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGF 418
Query: 264 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL-- 321
++N +AL LFH+M E+ PN VT+ S+ +H + ++ G
Sbjct: 419 SQNGSIHEALFLFHRMNSESV--TPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLA 476
Query: 322 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFEN 381
S + V AL+ Y +CG+ +FD ++ + ++W+++I YG G ++++FE
Sbjct: 477 SSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEE 536
Query: 382 MIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRAN 441
M+ + P+ +F ++L AC H G+V EGK F SM Y P +HY CMVD+L RA
Sbjct: 537 MLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAG 596
Query: 442 RLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLAD 501
L++A+ +IE MP +P +G+ L C +H +L E + +L P +A YVL+++
Sbjct: 597 ELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSN 656
Query: 502 IYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIE 534
+YA W+ K VR LM +R L K+ G S +E
Sbjct: 657 LYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 163/322 (50%), Gaps = 13/322 (4%)
Query: 87 VLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRER 146
+L+ C S R H L +GL D +ATKL+++Y G AR VFD+ E
Sbjct: 49 LLLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEP 105
Query: 147 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG 206
Y+W R + E+++LY + G D ++ LKAC + L G
Sbjct: 106 DFYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACT----ELQDLDNG 161
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 266
K+IH +++ +N+ V+T LLD+YAK G I A+ VF + +N V W++MI Y KN
Sbjct: 162 KKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKN 220
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 326
D+ + L LF++M + + N T ++ HG +++ G++
Sbjct: 221 DLCEEGLVLFNRM--RENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSC 278
Query: 327 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 386
++ +L+ MY +CG+IS RVF++ + D+V W ++I Y +NG +A+ +F+ M
Sbjct: 279 LVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVE 338
Query: 387 VSPSYISFITVLCACSHAGLVE 408
+ P+ ++ +VL C GL+E
Sbjct: 339 IKPNCVTIASVLSGC---GLIE 357
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 139/350 (39%), Gaps = 38/350 (10%)
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 266
++ H + +G +I + T L+ +Y FG A VF +P + W M+ CY N
Sbjct: 61 RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWKVMLRCYCLN 120
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR-GLDSIM 325
V+ ++L+ ++ + + +H +++ D++
Sbjct: 121 KESVEVVKLYDLLMKHGFRY--DDIVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNV- 177
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
V+ L+ MY +CGEI +VF+ + +VV W S+I+ Y N ++ + +F M
Sbjct: 178 -VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMREN 236
Query: 386 GVSPSYISFITVLCACSHAGLVEEGK---------------ILFESMLSKY--------- 421
V + ++ T++ AC+ + +GK L S+L Y
Sbjct: 237 NVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNA 296
Query: 422 -RI-----HPGMEHYACMVDLLGRANRLDEAIKLIEDMP---FEPGPTVWGSLLGSCRIH 472
R+ H + + M+ ++EA+ L + M +P S+L C +
Sbjct: 297 RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLI 356
Query: 473 CNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKR 522
N EL + ++ W+ L +YA+ D K V ++ ++
Sbjct: 357 ENLELGRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAKYVFEMESEK 406
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 7/179 (3%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGL--DQDPYLATKLINMYHELGSLDCA 136
P+ T+ L +CA S + G +H Y V G ++ T L++ Y + G A
Sbjct: 440 TPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSA 499
Query: 137 RKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVS 196
R +FD E+ W+A G LEL+ +M + T+T +L AC +
Sbjct: 500 RLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHT 559
Query: 197 EFSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 254
+ +GK+ +++ + + + + T ++D+ A+ G + A + MP + V
Sbjct: 560 GM----VNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKMPIQPDV 614
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/478 (29%), Positives = 241/478 (50%), Gaps = 13/478 (2%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I SL R G+ +++ ++ W +N P I LI + G+ H +++
Sbjct: 302 IIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHC 361
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDE-TRERTIYIWNAFFRALAMVGRGEELLELY 171
D + L++MY + L A K+F + E WN + + + +EL+
Sbjct: 362 FSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELF 421
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
R++ GI D + T V+ +C + + GK +H +++ + I V+ +L+D+
Sbjct: 422 RKIQNLGIEIDSASATSVISSCS----HIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDL 477
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSV 291
Y K G ++ A +F N ++W+AMI Y + KA+ LF +MV E + P+S+
Sbjct: 478 YGKMGDLTVAWRMF-CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSE--NFKPSSI 534
Query: 292 TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV 351
T+V++ +H +I + + + ALI MY +CG + +FD
Sbjct: 535 TLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAG 594
Query: 352 KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
D V WN +IS YG +G + AI +F+ M V P+ +F+ +L AC+HAGLVE+GK
Sbjct: 595 NQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGK 654
Query: 412 ILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRI 471
LF M +Y + P ++HY+C+VDLL R+ L+EA + MPF P +WG+LL SC
Sbjct: 655 KLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMT 713
Query: 472 HCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPG 529
H E+ R + +P N G Y++LA++Y+ A W + + R++M + + K G
Sbjct: 714 HGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAG 771
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 203/438 (46%), Gaps = 21/438 (4%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVD-S 111
+I++ G++ ++L +L S ++P H T +++ +CA+ F G VH ++
Sbjct: 96 IIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG 155
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
G D++ + + Y + G L A VFDE +R + W A G E L
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYL 215
Query: 172 RQMNWSGIPSDR---FTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
+M+ +G D+ T +AC ++ L++G+ +H +++G + V +++
Sbjct: 216 CKMHSAGSDVDKPNPRTLECGFQACS----NLGALKEGRCLHGFAVKNGLASSKFVQSSM 271
Query: 229 LDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 288
Y+K G S A FR + ++ SW+++I A++ ++ ++F +M + P
Sbjct: 272 FSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMH--P 329
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
+ V + + HGF++R V N+L++MY + +S+ E++F
Sbjct: 330 DGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLF 389
Query: 349 DKV-KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLV 407
++ + + +WN+++ YG K I++F + + G+ S +V+ +CSH G V
Sbjct: 390 CRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAV 449
Query: 408 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
GK L + K + + ++DL G+ L A ++ + + W +++
Sbjct: 450 LLGKSL-HCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEA--DTNVITWNAMIA 506
Query: 468 SCRIHCNAELAERASAML 485
S +HC E +E+A A+
Sbjct: 507 S-YVHC--EQSEKAIALF 521
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 169/391 (43%), Gaps = 8/391 (2%)
Query: 92 CAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIW 151
C Q S R + ++ GL ++ ++A+KLI+ Y G + + +VF R I++W
Sbjct: 34 CDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLW 93
Query: 152 NAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHA 211
N+ +A G L + M SG D FT V+ AC + G +H
Sbjct: 94 NSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACA----ELLWFHVGTFVHG 149
Query: 212 NILRH-GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPV 270
+L+H G++ N V + + Y+K G + A VF MP ++ V+W+A+I + +N
Sbjct: 150 LVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESE 209
Query: 271 KALELFHQMVLEACD-SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 329
L +M D PN T+ +HGF ++ GL S V +
Sbjct: 210 GGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQS 269
Query: 330 ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 389
++ + Y + G S F ++ + D+ SW S+I+ +G +++ +F M ++G+ P
Sbjct: 270 SMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGMHP 329
Query: 390 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 449
+ ++ LV +GK F + ++ ++ + + L A KL
Sbjct: 330 DGVVISCLINELGKMMLVPQGKA-FHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKL 388
Query: 450 IEDMPFEPGPTVWGSLL-GSCRIHCNAELAE 479
+ E W ++L G ++ C+ + E
Sbjct: 389 FCRISEEGNKEAWNTMLKGYGKMKCHVKCIE 419
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 141/448 (31%), Positives = 236/448 (52%), Gaps = 10/448 (2%)
Query: 89 IQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETR---E 145
+++C+ + G+ +H +V SGL+ P+ + LI+MY GSL A VF + +
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVN 304
Query: 146 RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQK 205
++ +WN+ + E L L Q+ S + D +T + LK C+ + L+
Sbjct: 305 SSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICI----NYVNLRL 360
Query: 206 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 265
G ++H+ ++ GYE + V + L+D++A G I A+ +F +P K+ +++S +I K
Sbjct: 361 GLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK 420
Query: 266 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 325
+ A LF +++ D+ + + ++ +HG +++G +S
Sbjct: 421 SGFNSLAFYLFRELIKLGLDA--DQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEP 478
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
AL+ MY +CGEI G +FD + DVVSW +I +G NG ++A + F MI+
Sbjct: 479 VTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINI 538
Query: 386 GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDE 445
G+ P+ ++F+ +L AC H+GL+EE + E+M S+Y + P +EHY C+VDLLG+A E
Sbjct: 539 GIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQE 598
Query: 446 AIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAE 505
A +LI MP EP T+W SLL +C H NA L + L + P + Y L++ YA
Sbjct: 599 ANELINKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYAT 658
Query: 506 AKMWSDVKSVRKLMGKRVLQKVPGCSWI 533
MW + VR+ K++ K G SWI
Sbjct: 659 LGMWDQLSKVRE-AAKKLGAKESGMSWI 685
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 142/316 (44%), Gaps = 36/316 (11%)
Query: 83 KTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDE 142
K I ++ C + +F G + +++ G+ Q+ ++A +I+MY + L A KVFDE
Sbjct: 6 KLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDE 65
Query: 143 TRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSDRFTYTYVLKACVVSEFSVY 201
ER I W G+ + +ELYR+M + ++ F Y+ VLKAC + V
Sbjct: 66 MSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGL----VG 121
Query: 202 PLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 261
+Q G ++ I + ++ +M +++D+Y K G + ANS F+ + +S SW+ +I
Sbjct: 122 DIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLIS 181
Query: 262 CYAKNDMPVKALELFHQM----VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF-- 315
Y K + +A+ LFH+M V+ I V S + GF
Sbjct: 182 GYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFAL 241
Query: 316 ----------------------ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK- 352
+++ GL+S I+ALI MY CG + VF + K
Sbjct: 242 PCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKL 301
Query: 353 --NPDVVSWNSLISMY 366
N V WNS++S +
Sbjct: 302 AVNSSVAVWNSMLSGF 317
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 131/301 (43%), Gaps = 8/301 (2%)
Query: 71 LEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHEL 130
L++ S+ T+ ++ C + G VH +V SG + D + + L++++ +
Sbjct: 331 LQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYELDYIVGSILVDLHANV 390
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
G++ A K+F + I ++ R G L+R++ G+ +D+F + +L
Sbjct: 391 GNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNIL 450
Query: 191 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 250
K C S+ L GK+IH ++ GYE T L+D+Y K G I +F M
Sbjct: 451 KVCS----SLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGEIDNGVVLFDGMLE 506
Query: 251 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX-XXXXXXXXXX 309
++ VSW+ +I + +N +A FH+M+ + PN VT + +
Sbjct: 507 RDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIE--PNKVTFLGLLSACRHSGLLEEAR 564
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLISMYGN 368
+ GL+ + ++ + G+ G + +K+ PD W SL++ G
Sbjct: 565 STLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKTIWTSLLTACGT 624
Query: 369 N 369
+
Sbjct: 625 H 625
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 103/211 (48%), Gaps = 10/211 (4%)
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
V ++G+ I A++++ G +N+ + ++ +Y F +S A+ VF M +N V+W+ M
Sbjct: 18 VQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNIVTWTTM 77
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
+ Y + P KA+EL+ +M L++ + N +V V+ I +
Sbjct: 78 VSGYTSDGKPNKAIELYRRM-LDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKE 136
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
L + ++N+++ MY + G + F ++ P SWN+LIS Y G +A+ +F
Sbjct: 137 NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLF 196
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
H+ P+ +S+ C +G V++G
Sbjct: 197 ----HRMPQPNVVSW-----NCLISGFVDKG 218
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/503 (28%), Positives = 242/503 (48%), Gaps = 71/503 (14%)
Query: 108 LVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEEL 167
++ + L+QD L + I LD A + +E ++++NA F+
Sbjct: 796 MIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRS 855
Query: 168 LELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
LELY +M + +TY+ ++KA S + + G+ + A+I + G+ ++ + TT
Sbjct: 856 LELYVRMLRDSVSPSSYTYSSLVKA------SSFASRFGESLQAHIWKFGFGFHVKIQTT 909
Query: 228 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK---------------------- 265
L+D Y+ G I A VF MP ++ ++W+ M+ Y +
Sbjct: 910 LIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATS 969
Query: 266 --------------------NDMPVK--------------------ALELFHQMVLEACD 285
N MPVK A+ +F++M+ E
Sbjct: 970 NCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI- 1028
Query: 286 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGE 345
IP+ VTM +V VH + L+ G + + +AL+ MY +CG +
Sbjct: 1029 -IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERAL 1087
Query: 346 RVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 405
VF + ++ WNS+I +G+ ++A+++F M + V P+ ++F++V AC+HAG
Sbjct: 1088 LVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAG 1147
Query: 406 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSL 465
LV+EG+ ++ SM+ Y I +EHY MV L +A + EA++LI +M FEP +WG+L
Sbjct: 1148 LVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGAL 1207
Query: 466 LGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQ 525
L CRIH N +AE A L LEP N+G Y LL +YAE W DV +R M + ++
Sbjct: 1208 LDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIE 1267
Query: 526 KV-PGCSWIEVKKKIYSFVSSEE 547
K+ PG S I + K+ + F ++++
Sbjct: 1268 KICPGTSSIRIDKRDHLFAAADK 1290
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 120/252 (47%), Gaps = 16/252 (6%)
Query: 42 PVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSS 97
PVKDI S +I+ + +++A+ V + P T+ +I +CA
Sbjct: 993 PVKDIISWTT-----MIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGV 1047
Query: 98 FSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRA 157
G++VH Y + +G D Y+ + L++MY + GSL+ A VF ++ ++ WN+
Sbjct: 1048 LEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEG 1107
Query: 158 LAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL-RH 216
LA G +E L+++ +M + + T+ V AC + + +G+ I+ +++ +
Sbjct: 1108 LAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL----VDEGRRIYRSMIDDY 1163
Query: 217 GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMI-GCYAKNDMPVKALE 274
N+ ++ +++K G I A + M + N+V W A++ GC ++ + +
Sbjct: 1164 SIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKNLVIAEIA 1223
Query: 275 LFHQMVLEACDS 286
MVLE +S
Sbjct: 1224 FNKLMVLEPMNS 1235
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 136/469 (28%), Positives = 241/469 (51%), Gaps = 6/469 (1%)
Query: 82 HKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFD 141
H T+ +++ C + +H + SG D++ + KLI Y + G R VFD
Sbjct: 155 HATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFD 214
Query: 142 ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVY 201
R + A L E+ L L+ M + + TY L AC S+ V
Sbjct: 215 GMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIV- 273
Query: 202 PLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 261
+G++IHA + ++G E + + + L+D+Y+K G I A ++F + + VS + ++
Sbjct: 274 ---EGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILV 330
Query: 262 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 321
A+N +A++ F +M+ + N V+ +V +H +++R
Sbjct: 331 GLAQNGSEEEAIQFFIRMLQAGVEIDANVVS--AVLGVSFIDNSLGLGKQLHSLVIKRKF 388
Query: 322 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFEN 381
V N LI MY +CG+++ + VF ++ + VSWNS+I+ + +G+G A++++E
Sbjct: 389 SGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEE 448
Query: 382 MIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRAN 441
M V P+ ++F+++L ACSH GL+++G+ L M + I P EHY C++D+LGRA
Sbjct: 449 MTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRAG 508
Query: 442 RLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLAD 501
L EA I+ +P +P +W +LLG+C H + E+ E A+ LF+ P ++ ++L+A+
Sbjct: 509 LLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIAN 568
Query: 502 IYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
IY+ W + K M + K G S IE++ K +SFV ++ +P
Sbjct: 569 IYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHP 617
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 143/315 (45%), Gaps = 24/315 (7%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
+P+ T + +C+ +G+ +H L G++ + + + L++MY + GS++ A
Sbjct: 253 HPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWT 312
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
+F+ T E LA G EE ++ + +M +G+ D + VL +
Sbjct: 313 IFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDN- 371
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
L GK++H+ +++ + N V L+++Y+K G ++ + +VFR MP +N VSW++
Sbjct: 372 ---SLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNS 428
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVS-------VXXXXXXXXXXXXXXX 311
MI +A++ + AL+L+ +M + P VT +S V
Sbjct: 429 MIAAFARHGHGLAALKLYEEMT--TLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKE 486
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLI---SMYG 367
VHG R +I M GR G + + D + PD W +L+ S +G
Sbjct: 487 VHGIEPR------TEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHG 540
Query: 368 NNGYGKKAI-QIFEN 381
+ G+ A Q+F+
Sbjct: 541 DTEVGEYAAEQLFQT 555
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 118/256 (46%), Gaps = 14/256 (5%)
Query: 206 GKEIHANILRHG-----YEENIH-----VMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 255
G +HA+I+++ + +IH V +LL +YAK G + A +F MP ++ +S
Sbjct: 64 GPCLHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVIS 123
Query: 256 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 315
+ + + +N L +M+ + T+ V +H
Sbjct: 124 QNIVFYGFLRNRETESGFVLLKRMLGSGG---FDHATLTIVLSVCDTPEFCLVTKMIHAL 180
Query: 316 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 375
+ G D + V N LIT Y +CG G VFD + + +V++ ++IS N +
Sbjct: 181 AILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDG 240
Query: 376 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 435
+++F M V P+ +++++ L ACS + + EG+ + ++L KY I + + ++D
Sbjct: 241 LRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQI-HALLWKYGIESELCIESALMD 299
Query: 436 LLGRANRLDEAIKLIE 451
+ + +++A + E
Sbjct: 300 MYSKCGSIEDAWTIFE 315
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 241 bits (616), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 148/508 (29%), Positives = 250/508 (49%), Gaps = 43/508 (8%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLV-DSGLDQDPYLATKLINMYHELGSLDCAR 137
+P TI ++ CAQ + + G+++H Y++ S L +D + LI+ Y G A
Sbjct: 327 SPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAY 386
Query: 138 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
F + I WNA A A + + L L + I D T +LK C+
Sbjct: 387 WAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCI--- 443
Query: 198 FSVYPLQKGKEIHANILRHGY---EENIHVMTTLLDVYAKFGCISYANSVF------RAM 248
+V + K KE+H ++ G EE + LLD YAK G + YA+ +F R +
Sbjct: 444 -NVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTL 502
Query: 249 PAKNSV--------------------------SWSAMIGCYAKNDMPVKALELFHQMVLE 282
+ NS+ +WS M+ YA++ P +A+ +F + ++
Sbjct: 503 VSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFRE--IQ 560
Query: 283 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 342
A PN+VT++++ HG+I+R GL I + L+ +Y +CG +
Sbjct: 561 ARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDI-RLKGTLLDVYAKCGSLK 619
Query: 343 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
VF D+V + ++++ Y +G GK+A+ I+ +M + P ++ T+L AC
Sbjct: 620 HAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACC 679
Query: 403 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVW 462
HAGL+++G +++S+ + + + P ME YAC VDL+ R RLD+A + MP EP +W
Sbjct: 680 HAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNANIW 739
Query: 463 GSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKR 522
G+LL +C + +L + L + E + GN+VL++++YA W V +R LM K+
Sbjct: 740 GTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMKKK 799
Query: 523 VLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
++K GCSW+EV + FVS + +P
Sbjct: 800 EMKKPAGCSWLEVDGQRNVFVSGDCSHP 827
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 171/345 (49%), Gaps = 14/345 (4%)
Query: 74 LWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSL 133
L S H+ ++++CA S + GR +H + G ++ ++NMY + +
Sbjct: 13 LLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRM 72
Query: 134 DCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS-DRFTYTYVLKA 192
D +K+F + +WN L+ V G E + ++ M+++ P T+ VL
Sbjct: 73 DDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKPSSVTFAIVLPL 131
Query: 193 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCI-SYANSVFRAMPAK 251
CV + GK +H+ I++ G E++ V L+ +YAKFG I A + F + K
Sbjct: 132 CV----RLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADK 187
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX---XXXXXXXXXXX 308
+ VSW+A+I +++N+M A F M+ E + PN T+ +V
Sbjct: 188 DVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTE--PNYATIANVLPVCASMDKNIACRS 245
Query: 309 XXXVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 367
+H ++++R L + + V N+L++ Y R G I +F ++ + D+VSWN +I+ Y
Sbjct: 246 GRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYA 305
Query: 368 NNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGK 411
+N KA Q+F N++H+G VSP ++ I++L C+ + GK
Sbjct: 306 SNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGK 350
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 202/440 (45%), Gaps = 20/440 (4%)
Query: 77 ERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSL-DC 135
E PS T +++ C + +G+ +H Y++ +GL++D + L++MY + G +
Sbjct: 117 EPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPD 176
Query: 136 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 195
A FD ++ + WNA + + + M + T VL C
Sbjct: 177 AYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCAS 236
Query: 196 SEFSVYPLQKGKEIHANILRHGY-EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 254
+ ++ + G++IH+ +++ + + ++ V +L+ Y + G I A S+F M +K+ V
Sbjct: 237 MDKNI-ACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLV 295
Query: 255 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 314
SW+ +I YA N KA +LFH +V + D P+SVT++S+ +H
Sbjct: 296 SWNVVIAGYASNCEWFKAFQLFHNLVHKG-DVSPDSVTIISILPVCAQLTDLASGKEIHS 354
Query: 315 FILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGK 373
+ILR L V NALI+ Y R G+ S F + D++SWN+++ + ++
Sbjct: 355 YILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQF 414
Query: 374 KAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA-- 431
+ + + +++++ ++ ++ +++L C + + GK+ + Y + G+ H
Sbjct: 415 QFLNLLHHLLNEAITLDSVTILSLLKFCINVQGI--GKV---KEVHGYSVKAGLLHDEEE 469
Query: 432 -----CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLF 486
++D + ++ A K+ + + SLL + N+ + A +
Sbjct: 470 PKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYNSLLSG---YVNSGSHDDAQMLFT 526
Query: 487 ELEPWNAGNYVLLADIYAEA 506
E+ + + L+ IYAE+
Sbjct: 527 EMSTTDLTTWSLMVRIYAES 546
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 138/447 (30%), Positives = 236/447 (52%), Gaps = 14/447 (3%)
Query: 104 VHRYLVDSGLDQDPYLATKLINM--YHELGSLDCARKVFDETRERTIYIWNAFFRALAMV 161
+H + S L D ++ ++L+ + L AR + + + T WN R +
Sbjct: 32 IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSS 91
Query: 162 GRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN 221
E + +Y +M GI ++ T+ ++LKAC S L G++I +L+HG++ +
Sbjct: 92 DSPVESIWVYSEMKRRGIKPNKLTFPFLLKACA----SFLGLTAGRQIQVEVLKHGFDFD 147
Query: 222 IHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 281
++V L+ +Y S A VF M +N VSW++++ +N E F +M+
Sbjct: 148 VYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI- 206
Query: 282 EACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI 341
P+ TMV + VH ++ R L+ + AL+ MY + G +
Sbjct: 207 -GKRFCPDETTMVVLLSACGGNLSLGKL--VHSQVMVRELELNCRLGTALVDMYAKSGGL 263
Query: 342 SIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCA 400
VF+++ + +V +W+++I G+ ++A+Q+F M+ + V P+Y++F+ VLCA
Sbjct: 264 EYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCA 323
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT 460
CSH GLV++G F M ++I P M HY MVD+LGRA RL+EA I+ MPFEP
Sbjct: 324 CSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAV 383
Query: 461 VWGSLLGSCRIHCNAE---LAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRK 517
VW +LL +C IH + + + E+ L ELEP +GN V++A+ +AEA+MW++ VR+
Sbjct: 384 VWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRR 443
Query: 518 LMGKRVLQKVPGCSWIEVKKKIYSFVS 544
+M + ++K+ G S +E+ + F S
Sbjct: 444 VMKETKMKKIAGESCLELGGSFHRFFS 470
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 150/490 (30%), Positives = 244/490 (49%), Gaps = 48/490 (9%)
Query: 102 RDVHRYLVDSGLDQDPYLATKLINM-YHELGSLDCARKVFDETRERTIYIWNAFFRALA- 159
+ V +++ SGL +L KL+ L +L AR +FD +++ A A +
Sbjct: 41 KQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFSFPNTHLYAAVLTAYSS 100
Query: 160 -MVGRGEELLELYRQMNWSGIPS-DRFTYTYVLKAC--VVSEFSVYPLQKGKEIHANILR 215
+ +R M +P + F Y VLK+ + S FS PL +H ++ +
Sbjct: 101 SLPLHASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFST-PL-----VHTHLFK 154
Query: 216 HGYEENIHVMTTLLDVYAK-FGCISYANSVFRAMPAKNSVSWSAMIGCYAKN-------- 266
G+ + V T LL YA I+ A +F M +N VSW+AM+ YA++
Sbjct: 155 SGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVA 214
Query: 267 ---DMP--------------------VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 303
DMP ++A+ LF +M+ E PN VT+V V
Sbjct: 215 LFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIR-PNEVTVVCVLSACAQT 273
Query: 304 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 363
+H F RR L S + V N+L+ +YG+CG + VF + +WNS+I
Sbjct: 274 GTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMI 333
Query: 364 SMYGNNGYGKKAIQIFENMIH---QGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK 420
+ + +G ++AI +FE M+ + P +I+FI +L AC+H GLV +G+ F+ M ++
Sbjct: 334 NCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNR 393
Query: 421 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 480
+ I P +EHY C++DLLGRA R DEA++++ M + +WGSLL +C+IH + +LAE
Sbjct: 394 FGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEV 453
Query: 481 ASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIY 540
A L L P N G ++A++Y E W + + RK++ + K PG S IE+ +++
Sbjct: 454 AVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVH 513
Query: 541 SFVSSEEDNP 550
F S ++ +P
Sbjct: 514 QFYSLDKSHP 523
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 40/340 (11%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMY-HELGSLDCARK 138
P+H ++++S SS VH +L SG + T L++ Y + + AR+
Sbjct: 124 PNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQ 183
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC----- 193
+FDE ER + W A A G + L+ M +PS + +L AC
Sbjct: 184 LFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPS----WNAILAACTQNGL 239
Query: 194 ----------VVSEFSVYP-----------------LQKGKEIHANILRHGYEENIHVMT 226
+++E S+ P LQ K IHA R ++ V
Sbjct: 240 FLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSN 299
Query: 227 TLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV-LEACD 285
+L+D+Y K G + A+SVF+ K+ +W++MI C+A + +A+ +F +M+ L D
Sbjct: 300 SLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNIND 359
Query: 286 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIG 344
P+ +T + + + R G++ + LI + GR G
Sbjct: 360 IKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEA 419
Query: 345 ERVFDKVK-NPDVVSWNSLISMYGNNGYGKKAIQIFENMI 383
V +K D W SL++ +G+ A +N++
Sbjct: 420 LEVMSTMKMKADEAIWGSLLNACKIHGHLDLAEVAVKNLV 459
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 138/408 (33%), Positives = 216/408 (52%), Gaps = 11/408 (2%)
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS-GIPSDRFTYTYVLKACVVSEF 198
F +R + + L + GR +E + L WS G+ + TY +L+ C +
Sbjct: 68 FQVENQRKTEKLDKTLKGLCVTGRLKEAVGLL----WSSGLQVEPETYAVLLQECKQRK- 122
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
KGK IHA + G+ N ++ LL +YA G + A +FR++ ++ + W+A
Sbjct: 123 ---EYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNA 179
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
MI Y + + + L +++ M +P+ T SV H +++
Sbjct: 180 MISGYVQKGLEQEGLFIYYDMRQNRI--VPDQYTFASVFRACSALDRLEHGKRAHAVMIK 237
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
R + S + V +AL+ MY +C S G RVFD++ +V++W SLIS YG +G + ++
Sbjct: 238 RCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKC 297
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
FE M +G P+ ++F+ VL AC+H GLV++G F SM Y I P +HYA MVD LG
Sbjct: 298 FEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLG 357
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVL 498
RA RL EA + + P + P VWGSLLG+CRIH N +L E A+ EL+P N GNYV+
Sbjct: 358 RAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVV 417
Query: 499 LADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 546
A+ YA + VR+ M ++K PG S IE++ +++ F+ +
Sbjct: 418 FANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDD 465
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 119/242 (49%), Gaps = 7/242 (2%)
Query: 56 QLIQSLCRGGNHKQALEVLWSER-NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLD 114
+ ++ LC G K+A+ +LWS +T VL+Q C Q+ ++ G+ +H + G
Sbjct: 81 KTLKGLCVTGRLKEAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFA 140
Query: 115 QDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM 174
+ YL KL+ +Y G L A +F + R + WNA G +E L +Y M
Sbjct: 141 LNEYLKVKLLILYALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDM 200
Query: 175 NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK 234
+ I D++T+ V +AC + L+ GK HA +++ + NI V + L+D+Y K
Sbjct: 201 RQNRIVPDQYTFASVFRACSALD----RLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFK 256
Query: 235 FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMV 294
S + VF + +N ++W+++I Y + + L+ F +M E C PN VT +
Sbjct: 257 CSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCR--PNPVTFL 314
Query: 295 SV 296
V
Sbjct: 315 VV 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/233 (21%), Positives = 92/233 (39%), Gaps = 13/233 (5%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + G ++ L + + R P T + ++C+ G+ H ++
Sbjct: 180 MISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRC 239
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ + + + L++MY + S +VFD+ R + W + G+ E+L+ +
Sbjct: 240 IKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFE 299
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR-HGYEENIHVMTTLLDV 231
+M G + T+ VL AC + KG E ++ R +G E ++D
Sbjct: 300 KMKEEGCRPNPVTFLVVLTACNHGGL----VDKGWEHFYSMKRDYGIEPEGQHYAAMVDT 355
Query: 232 YAKFGCISYANSVFRAMPAKNSVS-WSAMIG-CYAKNDMPVKALELFHQMVLE 282
+ G + A P K W +++G C + VK LEL LE
Sbjct: 356 LGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGN--VKLLELAATKFLE 406
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 139/484 (28%), Positives = 244/484 (50%), Gaps = 29/484 (5%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
++ +++++C++ G +H +L +GL D +L LI +Y + G L +R++FD
Sbjct: 123 SLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRM 182
Query: 144 RERTIYIWNAFFRALAMVG---RGEEL-----LELYRQMNWSGIPSDRFTYTYVLKACVV 195
+R +N+ G EL +E+ ++W+ + S Y +
Sbjct: 183 PKRDSVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMIS---GYAQTSDGVDI 239
Query: 196 SEFSVYPLQKGKEIHANILRHGY-----------------EENIHVMTTLLDVYAKFGCI 238
+ + + I N + GY ++ T++D YAK G +
Sbjct: 240 ASKLFADMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFV 299
Query: 239 SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXX 298
+A ++F MP ++ V++++M+ Y +N ++ALE+F M E+ +P+ T+V V
Sbjct: 300 HHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKES-HLLPDDTTLVIVLP 358
Query: 299 XXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVS 358
+H +I+ + + ALI MY +CG I VF+ ++N +
Sbjct: 359 AIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDH 418
Query: 359 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 418
WN++I +G G+ A + + + P I+F+ VL ACSH+GLV+EG + FE M
Sbjct: 419 WNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMR 478
Query: 419 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
K++I P ++HY CMVD+L R+ ++ A LIE+MP EP +W + L +C H E
Sbjct: 479 RKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHKEFETG 538
Query: 479 ERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKK 538
E + L +N +YVLL+++YA MW DV+ VR +M +R ++K+PGCSWIE+ +
Sbjct: 539 ELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGR 598
Query: 539 IYSF 542
++ F
Sbjct: 599 VHEF 602
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 202/442 (45%), Gaps = 49/442 (11%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGS---LDCARKVF 140
TI VL SC K+S D +H L+ +G+ ++ L T+++ + D AR VF
Sbjct: 15 TIHVL-GSC--KTS-DDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVF 70
Query: 141 DETRERTI--------YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 192
E + ++WNA ++ + + L L M +G+ D+F+ + VLKA
Sbjct: 71 HEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKA 130
Query: 193 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN 252
C F ++ G +IH + + G ++ + L+ +Y K GC+ + +F MP ++
Sbjct: 131 CSRLGF----VKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 253 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI------------PNSVTMVS-VXXX 299
SVS+++MI Y K + V A ELF M +E + I + V + S +
Sbjct: 187 SVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFAD 246
Query: 300 XXXXXXXXXXXXVHGFILR------RGLDSIMPVIN-----ALITMYGRCGEISIGERVF 348
+ G++ +GL +MP + +I Y + G + + +F
Sbjct: 247 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 349 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLV 407
D++ + DVV++NS+++ Y N Y +A++IF +M + + P + + VL A + G +
Sbjct: 307 DQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 366
Query: 408 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
+ + ++ K + + G + ++D+ + + A+ + E + W +++G
Sbjct: 367 SKAIDMHLYIVEK-QFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIE-NKSIDHWNAMIG 424
Query: 468 SCRIHCNAELAERASAMLFELE 489
IH L E A ML ++E
Sbjct: 425 GLAIH---GLGESAFDMLLQIE 443
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 13/202 (6%)
Query: 67 HKQALEVLWSERNPSH-----KTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLAT 121
H +ALE+ SH T+ +++ + AQ S D+H Y+V+ L
Sbjct: 330 HMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGV 389
Query: 122 KLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS 181
LI+MY + GS+ A VF+ ++I WNA LA+ G GE ++ Q+ +
Sbjct: 390 ALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKP 449
Query: 182 DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR--HGYEENIHVMTTLLDVYAKFGCIS 239
D T+ VL AC S L K + ++R H E + ++D+ ++ G I
Sbjct: 450 DDITFVGVLNAC-----SHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIE 504
Query: 240 YANSVFRAMPAK-NSVSWSAMI 260
A ++ MP + N V W +
Sbjct: 505 LAKNLIEEMPVEPNDVIWRTFL 526
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/508 (31%), Positives = 250/508 (49%), Gaps = 46/508 (9%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG-LDQDPYLATKLINMYHELGSLDCAR 137
+P +T L+++ S S+ + +H +++ SG L YL L+ Y ELG+ A
Sbjct: 130 SPDRQTFLYLMKA---SSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAE 186
Query: 138 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
KVF + +N A G E L+LY +M GI D +T +L C
Sbjct: 187 KVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCG--- 243
Query: 198 FSVYPLQKGKEIHANILRHG--YEENIHVMTTLLDVYAK--------------------- 234
+ ++ GK +H I R G Y N+ + LLD+Y K
Sbjct: 244 -HLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRS 302
Query: 235 ----------FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKAL-ELFHQM-VLE 282
G + A +VF MP ++ VSW++++ Y+K + + ELF++M ++E
Sbjct: 303 WNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVE 362
Query: 283 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 342
P+ VTMVS+ VHG ++R L + +ALI MY +CG I
Sbjct: 363 KVK--PDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIE 420
Query: 343 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
VF DV W S+I+ +G G++A+Q+F M +GV+P+ ++ + VL ACS
Sbjct: 421 RAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACS 480
Query: 403 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIE-DMPFEPGPTV 461
H+GLVEEG +F M K+ P EHY +VDLL RA R++EA +++ MP P ++
Sbjct: 481 HSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPMRPSQSM 540
Query: 462 WGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGK 521
WGS+L +CR + E AE A L +LEP G YVLL++IYA W R+ M
Sbjct: 541 WGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMEN 600
Query: 522 RVLQKVPGCSWIEVKKKIYSFVSSEEDN 549
R ++K G S + + ++ FV++E+ N
Sbjct: 601 RGVKKTAGYSSVVGVEGLHRFVAAEKQN 628
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 208/465 (44%), Gaps = 61/465 (13%)
Query: 81 SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINM----YHELGSLDCA 136
+H+++ VL+++C ++ F + V ++ L D + ++LI Y E +LD A
Sbjct: 34 NHQSL-VLLENCNSRNQF---KQVLAQIMRFNLICDTFPMSRLIFFSAITYPE--NLDLA 87
Query: 137 RKVF-DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 195
+ +F + T ++++N A++ E LY M + DR T+ Y++KA
Sbjct: 88 KLLFLNFTPNPNVFVYNTMISAVS--SSKNECFGLYSSMIRHRVSPDRQTFLYLMKA--- 142
Query: 196 SEFSVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 254
S F L + K+IH +I+ G ++ +L+ Y + G A VF MP +
Sbjct: 143 SSF----LSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVS 198
Query: 255 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 314
S++ MI YAK ++AL+L+ +MV + + P+ T++S+ VHG
Sbjct: 199 SFNVMIVGYAKQGFSLEALKLYFKMVSDGIE--PDEYTVLSLLVCCGHLSDIRLGKGVHG 256
Query: 315 FILRRG--LDSIMPVINALITMYGRCGEISIGERVFDKVKNP------------------ 354
+I RRG S + + NAL+ MY +C E + +R FD +K
Sbjct: 257 WIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDM 316
Query: 355 -------------DVVSWNSLISMYGNNGYGKKAIQ--IFENMIHQGVSPSYISFITVLC 399
D+VSWNSL+ Y G ++ ++ +E I + V P ++ ++++
Sbjct: 317 EAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLIS 376
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 459
++ G + G+ + ++ + ++ + ++D+ + ++ A + + E
Sbjct: 377 GAANNGELSHGRWV-HGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTAT-EKDV 434
Query: 460 TVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYA 504
+W S++ H N + A + + E E N LLA + A
Sbjct: 435 ALWTSMITGLAFHGNGQQALQLFGRMQE-EGVTPNNVTLLAVLTA 478
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 235/460 (51%), Gaps = 10/460 (2%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
+P+ TI + + + + +G+ VH Y G D + T ++++Y + + AR+
Sbjct: 202 SPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARR 261
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM--NWSGIPSDRFTYTYVLKACVVS 196
VFD ++ W+A +E E++ QM N + +L C +
Sbjct: 262 VFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGC--A 319
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 256
F L G+ +H ++ G+ ++ V T++ YAK+G + A F + K+ +S+
Sbjct: 320 RFG--DLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISY 377
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
+++I N P ++ LFH+M P+ T++ V HG+
Sbjct: 378 NSLITGCVVNCRPEESFRLFHEMRTSGIR--PDITTLLGVLTACSHLAALGHGSSCHGYC 435
Query: 317 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 376
+ G + NAL+ MY +CG++ + +RVFD + D+VSWN+++ +G +G GK+A+
Sbjct: 436 VVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEAL 495
Query: 377 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM-LSKYRIHPGMEHYACMVD 435
+F +M GV+P ++ + +L ACSH+GLV+EGK LF SM + + P ++HY CM D
Sbjct: 496 SLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTD 555
Query: 436 LLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGN 495
LL RA LDEA + MPFEP V G+LL +C + NAEL S + L +
Sbjct: 556 LLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLGE-TTES 614
Query: 496 YVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV 535
VLL++ Y+ A+ W D +R + KR L K PG SW++V
Sbjct: 615 LVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 199/411 (48%), Gaps = 13/411 (3%)
Query: 68 KQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKL 123
++AL++ + N P+ T ++++CA + DG+ +H ++ S D Y+ T L
Sbjct: 85 EKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTAL 144
Query: 124 INMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPSD 182
++ Y + G L+ A KVFDE +R + WNA ++ +++ L+ M G+ +
Sbjct: 145 VDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPN 204
Query: 183 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 242
T + A + L++GK +H R G+ ++ V T +LDVYAK CI YA
Sbjct: 205 LSTIVGMFPALGRAG----ALREGKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYAR 260
Query: 243 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 302
VF KN V+WSAMIG Y +N+M +A E+F QM++ ++ V + +
Sbjct: 261 RVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGLILMGCAR 320
Query: 303 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 362
VH + ++ G + V N +I+ Y + G + R F ++ DV+S+NSL
Sbjct: 321 FGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSL 380
Query: 363 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE-SMLSKY 421
I+ N +++ ++F M G+ P + + VL ACSH + G ++ Y
Sbjct: 381 ITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGY 440
Query: 422 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
++ + + ++D+ + +LD A ++ + M + W ++L IH
Sbjct: 441 AVNTSICN--ALMDMYTKCGKLDVAKRVFDTM-HKRDIVSWNTMLFGFGIH 488
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 159/343 (46%), Gaps = 23/343 (6%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLD-QDPYLATKLINMYHELGSLDCARKVFDETRER 146
L+++C + + G+ +H++L+ L + L +Y ++ AR VFDE
Sbjct: 5 LLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHP 64
Query: 147 TI--YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQ 204
I W+ RA A E+ L+LY +M SG+ ++TY +VLKAC + +
Sbjct: 65 RINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACA----GLRAID 120
Query: 205 KGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYA 264
GK IH+++ + +++V T L+D YAK G + A VF MP ++ V+W+AMI ++
Sbjct: 121 DGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFS 180
Query: 265 KNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 323
+ + LF M D + PN T+V + VHG+ R G +
Sbjct: 181 LHCCLTDVIGLFLDM--RRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSN 238
Query: 324 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI 383
+ V ++ +Y + I RVFD + V+W+++I Y N K+A ++F M+
Sbjct: 239 DLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
Query: 384 HQG----VSPSYISFITVLCA---------CSHAGLVEEGKIL 413
V+P I I + CA C H V+ G IL
Sbjct: 299 VNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFIL 341
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 87/165 (52%), Gaps = 5/165 (3%)
Query: 312 VHGFILRRGLD-SIMPVINALITMYGRCGEISIGERVFDKVKNPDV--VSWNSLISMYGN 368
+H +L+R L S V+ L +Y C E+ + VFD++ +P + ++W+ +I Y +
Sbjct: 21 IHQHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFDEIPHPRINPIAWDLMIRAYAS 80
Query: 369 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 428
N + +KA+ ++ M++ GV P+ ++ VL AC+ +++GK L S ++ M
Sbjct: 81 NDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGK-LIHSHVNCSDFATDMY 139
Query: 429 HYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHC 473
+VD + L+ AIK+ ++MP + W +++ +HC
Sbjct: 140 VCTALVDFYAKCGELEMAIKVFDEMP-KRDMVAWNAMISGFSLHC 183
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 6/180 (3%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG 131
E+ S P T+ ++ +C+ ++ G H Y V G + + L++MY + G
Sbjct: 399 EMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCG 458
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
LD A++VFD +R I WN + G G+E L L+ M +G+ D T +L
Sbjct: 459 KLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILS 518
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYE--ENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
AC S + +GK++ ++ R + I + D+ A+ G + A MP
Sbjct: 519 ACSHSGL----VDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMP 574
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 240 bits (613), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 152/529 (28%), Positives = 245/529 (46%), Gaps = 56/529 (10%)
Query: 2 RVLQSPQHVRQAPFQTHLCYTSHVSSRLPVCFVSINPSANPV-------KDIKSXXXXXX 54
+ L Q +T L + + +S+L V F + NP V I S
Sbjct: 50 KSLTEIQQAHAFMLKTGLFHDTFSASKL-VAFAATNPEPKTVSYAHSILNRIGSPNGFTH 108
Query: 55 XQLIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVD 110
+I++ + AL E+L P + ++++CA F +GR +H +
Sbjct: 109 NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIK 168
Query: 111 SGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLEL 170
SGL D ++ L+N+Y G + ARKV D R WN+ A G +E L
Sbjct: 169 SGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL 228
Query: 171 YRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLD 230
+ +M E N+ ++
Sbjct: 229 FDEME-------------------------------------------ERNVESWNFMIS 245
Query: 231 VYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
YA G + A VF +MP ++ VSW+AM+ YA + LE+F++M+ ++ + P+
Sbjct: 246 GYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEK-PDG 304
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK 350
T+VSV VH +I + G++ + AL+ MY +CG+I VF
Sbjct: 305 FTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRA 364
Query: 351 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
DV +WNS+IS +G GK A++IF M+++G P+ I+FI VL AC+H G++++
Sbjct: 365 TSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQA 424
Query: 411 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCR 470
+ LFE M S YR+ P +EHY CMVDLLGR +++EA +L+ ++P + + SLLG+C+
Sbjct: 425 RKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACK 484
Query: 471 IHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 519
E AER + L EL ++ Y ++++YA W V R+ M
Sbjct: 485 RFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNM 533
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 141/467 (30%), Positives = 232/467 (49%), Gaps = 13/467 (2%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG 131
++L + P+ T ++ SC S + G VH + +G ++ ++ + MY
Sbjct: 281 KMLEASLRPTDLTFVSVMGSC---SCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFE 337
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
A KVF+ E+ + WN + G+ + +Y++M+ G+ D FT+ +L
Sbjct: 338 DFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLA 397
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 251
+ L + + A I++ G I + L+ Y+K G I A+ +F K
Sbjct: 398 TSL-------DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRK 450
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
N +SW+A+I + N P + LE F ++ +P++ T+ ++
Sbjct: 451 NLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQ 510
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 371
H ++LR G + NALI MY +CG I VF+++ DVVSWNSLIS Y +G
Sbjct: 511 THAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGE 570
Query: 372 GKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 430
G+ A+ ++ M +G V P +F VL ACSHAGLVEEG +F SM+ + + ++H+
Sbjct: 571 GENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHF 630
Query: 431 ACMVDLLGRANRLDEAIKLIEDMPFEPGP--TVWGSLLGSCRIHCNAELAERASAMLFEL 488
+C+VDLLGRA LDEA L++ G VW +L +C H + +L + + +L E
Sbjct: 631 SCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLLMEK 690
Query: 489 EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV 535
E + YV L++IYA A MW + + R+ + K GCSW+ +
Sbjct: 691 EKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 188/435 (43%), Gaps = 58/435 (13%)
Query: 58 IQSLCRGGNHKQALEVLW-----SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+ L R G ++ AL++ + P ++ + I + G VH Y + SG
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIY----------------------- 149
L +++ L+++Y LG+L +K FDE E +Y
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 150 ---------IWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSV 200
IWNA G E +EL+R+M+ G+ D+F + +L C
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSMC-----DY 202
Query: 201 YPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA--MPAKNSVSWSA 258
L GK++H+ +++ G+ V+ L+ +Y + A VF + ++ V+++
Sbjct: 203 GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNV 262
Query: 259 MIGCYA--KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
+I A K D ++L +F +M LEA P +T VSV VHG
Sbjct: 263 VIDGLAGFKRD---ESLLVFRKM-LEASLR-PTDLTFVSV---MGSCSCAAMGHQVHGLA 314
Query: 317 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 376
++ G + V NA +TMY + +VF+ ++ D+V+WN++IS Y GK A+
Sbjct: 315 IKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAM 374
Query: 377 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 436
+++ M GV P +F ++L ++E + ++ + K+ + +E ++
Sbjct: 375 SVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE----MVQACIIKFGLSSKIEISNALISA 430
Query: 437 LGRANRLDEAIKLIE 451
+ ++++A L E
Sbjct: 431 YSKNGQIEKADLLFE 445
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 169/398 (42%), Gaps = 27/398 (6%)
Query: 89 IQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET--RER 146
I S S G+ VH ++ +G + LI MY + A VF+ET R
Sbjct: 196 ILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVR 255
Query: 147 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG 206
+N LA R E LL + + S P+D T+ V+ +C + G
Sbjct: 256 DQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTD-LTFVSVMGSCSCAAM-------G 307
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 266
++H ++ GYE+ V + +Y+ F A+ VF ++ K+ V+W+ MI Y +
Sbjct: 308 HQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQA 367
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 326
+ A+ ++ +M + P+ T S+ V I++ GL S +
Sbjct: 368 KLGKSAMSVYKRMHIIGVK--PDEFTFGSL---LATSLDLDVLEMVQACIIKFGLSSKIE 422
Query: 327 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 386
+ NALI+ Y + G+I + +F++ +++SWN++IS + +NG+ + ++ F ++
Sbjct: 423 ISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESE 482
Query: 387 VS--PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA----CMVDLLGRA 440
V P + T+L C V ++ S Y + G ++++ +
Sbjct: 483 VRILPDAYTLSTLLSIC-----VSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQC 537
Query: 441 NRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
+ ++++ M E W SL+ + H E A
Sbjct: 538 GTIQNSLEVFNQMS-EKDVVSWNSLISAYSRHGEGENA 574
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 144/483 (29%), Positives = 242/483 (50%), Gaps = 14/483 (2%)
Query: 73 VLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGS 132
+L S +P+ T +++ C++ S+S G+ +H ++ S D L L++MY G
Sbjct: 291 MLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGD 350
Query: 133 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS-DRFTYTYVLK 191
+ A VF + WN+ + G GE+ + +YR++ P D +T++ +
Sbjct: 351 MREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAIS 410
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 251
A E V+ GK +H + + GYE ++ V TTLL +Y K A VF M +
Sbjct: 411 ATAEPERFVH----GKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKER 466
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
+ V W+ MI +++ A++ F +M E S + ++ SV
Sbjct: 467 DVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRS--DGFSLSSVIGACSDMAMLRQGEV 524
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 371
H +R G D +M V AL+ MYG+ G+ E +F NPD+ WNS++ Y +G
Sbjct: 525 FHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGM 584
Query: 372 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
+KA+ FE ++ G P ++++++L ACSH G +GK L+ M + I G +HY+
Sbjct: 585 VEKALSFFEQILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYS 643
Query: 432 CMVDLLGRANRLDEAIKLIEDMPFEPG---PTVWGSLLGSCRIHCNAELAERASAMLFEL 488
CMV+L+ +A +DEA++LIE P PG +W +LL +C N ++ A+ + +L
Sbjct: 644 CMVNLVSKAGLVDEALELIEQSP--PGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKL 701
Query: 489 EPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV-KKKIYSFVSSEE 547
+P + ++LL+++YA W DV +R+ + K PG SWIEV F S ++
Sbjct: 702 DPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQ 761
Query: 548 DNP 550
NP
Sbjct: 762 SNP 764
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 187/400 (46%), Gaps = 21/400 (5%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGL---DQDPYLATKLINMYHELGSLDCARKVFDETR 144
L + C + R +H ++ +G + PY LI+MY GSL+ ARKVFD+
Sbjct: 100 LTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMP 159
Query: 145 ERTIYIWNAFFRALAMVGRGEEL----LELYRQMNWSGIPSDRFTYTYVLKACVVSEFSV 200
R + +NA + A + R + L M + + + T+T +++ C V E
Sbjct: 160 HRNVVSYNALYSAYS---RNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLE--- 213
Query: 201 YPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI 260
+ G +++ I++ GY +N+ V T++L +Y+ G + A +F + +++V+W+ MI
Sbjct: 214 -DVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMI 272
Query: 261 GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG 320
KND L F M++ D P T V +H I+
Sbjct: 273 VGSLKNDKIEDGLMFFRNMLMSGVD--PTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSD 330
Query: 321 LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFE 380
+ +P+ NAL+ MY CG++ VF ++ NP++VSWNS+IS NG+G++A+ ++
Sbjct: 331 SLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYR 390
Query: 381 NMIHQGV-SPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 439
++ P +F + A + GK+L ++K + ++ + +
Sbjct: 391 RLLRMSTPRPDEYTFSAAISATAEPERFVHGKLL-HGQVTKLGYERSVFVGTTLLSMYFK 449
Query: 440 ANRLDEAIKLIEDMPFEPGPTVWGSLL-GSCRIHCNAELA 478
NR E+ + + D+ E +W ++ G R+ N+ELA
Sbjct: 450 -NREAESAQKVFDVMKERDVVLWTEMIVGHSRLG-NSELA 487
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 176/399 (44%), Gaps = 7/399 (1%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T L+Q CA G ++ ++ G + + T ++ MY G L+ AR++
Sbjct: 197 PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRI 256
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FD R WN + E+ L +R M SG+ +FTY+ VL C S+
Sbjct: 257 FDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGC--SKLG 314
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
Y L GK IHA I+ ++ + LLD+Y G + A VF + N VSW+++
Sbjct: 315 SYSL--GKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSI 372
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I ++N +A+ L ++ +L P+ T + +HG + +
Sbjct: 373 ISGCSENGFGEQAM-LMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKL 431
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
G + + V L++MY + E ++VFD +K DVV W +I + G + A+Q F
Sbjct: 432 GYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFF 491
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 439
M + S +V+ ACS ++ +G++ F + + M +VD+ G+
Sbjct: 492 IEMYREKNRSDGFSLSSVIGACSDMAMLRQGEV-FHCLAIRTGFDCVMSVCGALVDMYGK 550
Query: 440 ANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
+ + A + I + P W S+LG+ H E A
Sbjct: 551 NGKYETA-ETIFSLASNPDLKCWNSMLGAYSQHGMVEKA 588
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 168/401 (41%), Gaps = 18/401 (4%)
Query: 117 PYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEEL------LEL 170
PY LI+MY SL+ ARKVFD+ +R I V G L L
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 171 YRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY---EENIHVMTT 227
++ + + + + + + CV S+ L++ ++IHA +L G E+ +
Sbjct: 82 FQMIFFMPLNEIASSVVELTRKCV----SITVLKRARQIHALVLTAGAGAATESPYANNN 137
Query: 228 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN-DMPVKALELFHQMVLEACDS 286
L+ +Y + G + A VF MP +N VS++A+ Y++N D A L M E
Sbjct: 138 LISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK- 196
Query: 287 IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGER 346
PNS T S+ ++ I++ G + V +++ MY CG++ R
Sbjct: 197 -PNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 347 VFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGL 406
+FD V N D V+WN++I N + + F NM+ GV P+ ++ VL CS G
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 407 VEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
GK++ ++ + + ++D+ + EA + + P W S++
Sbjct: 316 YSLGKLIHARIIVSDSL-ADLPLDNALLDMYCSCGDMREAFYVFGRI-HNPNLVSWNSII 373
Query: 467 GSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAK 507
C + E A L + Y A I A A+
Sbjct: 374 SGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 238 bits (608), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 146/442 (33%), Positives = 234/442 (52%), Gaps = 35/442 (7%)
Query: 111 SGLDQDPYLATKLINMYHELGSLDCARKVFD------------ETRER---TIYIWNAFF 155
SG + Y LI Y + G ++ AR +FD E RER + WN+
Sbjct: 229 SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMI 288
Query: 156 RALAMVGRGEELLELYRQM-NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHA-NI 213
+A VG L+ QM + I + YV + + F+++ ++ H+ N+
Sbjct: 289 KAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNM 348
Query: 214 LRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKAL 273
+ GY A G + A F P K++VSW+++I Y KN +A+
Sbjct: 349 MVSGY--------------ASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAV 394
Query: 274 ELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALIT 333
+LF +M +E P+ T+ S+ +H +++ + + PV NALIT
Sbjct: 395 DLFIRMNIEG--EKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDV-PVHNALIT 451
Query: 334 MYGRCGEISIGERVFDKVK-NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYI 392
MY RCGEI R+FD++K +V++WN++I Y +G +A+ +F +M G+ PS+I
Sbjct: 452 MYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHI 511
Query: 393 SFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIED 452
+F++VL AC+HAGLV+E K F SM+S Y+I P MEHY+ +V++ + +EA+ +I
Sbjct: 512 TFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITS 571
Query: 453 MPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDV 512
MPFEP TVWG+LL +CRI+ N LA A+ + LEP ++ YVLL ++YA+ +W +
Sbjct: 572 MPFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEA 631
Query: 513 KSVRKLMGKRVLQKVPGCSWIE 534
VR M + ++K G SW++
Sbjct: 632 SQVRMNMESKRIKKERGSSWVD 653
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 126/311 (40%), Gaps = 65/311 (20%)
Query: 123 LINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS- 181
+I+ Y + ++ ARK+FD +R + WN G G LE R++ + +PS
Sbjct: 77 MISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCG-GIRFLEEARKL-FDEMPSR 134
Query: 182 DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 241
D F++ N + GY +N + LL
Sbjct: 135 DSFSW-------------------------NTMISGYAKNRRIGEALL------------ 157
Query: 242 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 301
+F MP +N+VSWSAMI + +N A+ LF +M ++ DS P +V+
Sbjct: 158 --LFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVK--DSSP-LCALVAGLIKNE 212
Query: 302 XXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN-------- 353
+G ++ G + ++ N LI YG+ G++ +FD++ +
Sbjct: 213 RLSEAAWVLGQYGSLV-SGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGG 271
Query: 354 -------PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGL 406
+VVSWNS+I Y G A +F+ M + IS+ T++ H
Sbjct: 272 EFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDT----ISWNTMIDGYVHVSR 327
Query: 407 VEEGKILFESM 417
+E+ LF M
Sbjct: 328 MEDAFALFSEM 338
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 147/455 (32%), Positives = 232/455 (50%), Gaps = 15/455 (3%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T ++++ C+ G VH ++ G D+D + T ++ Y + L ARKV
Sbjct: 108 PDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKV 167
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F E ER W A A G EE ++ M + S + ++ V S
Sbjct: 168 FGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERNLGS----WNALVDGLVKSG-- 221
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
L K++ + + +I T+++D YAK G + A +F + +WSA+
Sbjct: 222 --DLVNAKKLFDEMPKR----DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSAL 275
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I YA+N P +A ++F +M A + P+ MV + V ++ +R
Sbjct: 276 ILGYAQNGQPNEAFKVFSEMC--AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQR 333
Query: 320 -GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
S V+ ALI M +CG + ++F+++ D+VS+ S++ +G G +AI++
Sbjct: 334 MNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRL 393
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
FE M+ +G+ P ++F +L C + LVEEG FE M KY I +HY+C+V+LL
Sbjct: 394 FEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLS 453
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVL 498
R +L EA +LI+ MPFE + WGSLLG C +H N E+AE + LFELEP +AG+YVL
Sbjct: 454 RTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVL 513
Query: 499 LADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 533
L++IYA W+DV +R M + + K+ G SWI
Sbjct: 514 LSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 109/246 (44%), Gaps = 11/246 (4%)
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS-VFRAMPAKNSVSWSAMIGCYAKN 266
+IHA I+R G E++ ++++ + + +S VF +P+ + W+ +I Y+
Sbjct: 28 QIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERVPSPGTYLWNHLIKGYSNK 87
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 326
+ + + + +M+ + P+ T V VHG +LR G D +
Sbjct: 88 FLFFETVSILMRMMRTGL-ARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRIGFDKDVV 146
Query: 327 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 386
V + + YG+C ++ +VF ++ + VSW +L+ Y +G ++A +F+ M +
Sbjct: 147 VGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMFDLMPERN 206
Query: 387 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 446
+ S+ ++ +G + K LF+ M + I Y M+D + + A
Sbjct: 207 LG----SWNALVDGLVKSGDLVNAKKLFDEMPKRDII-----SYTSMIDGYAKGGDMVSA 257
Query: 447 IKLIED 452
L E+
Sbjct: 258 RDLFEE 263
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 238 bits (606), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 155/484 (32%), Positives = 245/484 (50%), Gaps = 43/484 (8%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKS-SFSD---GRDVHRYLVDSG 112
+I + R G ++++L+ K ++ S + S + D G+ +H ++
Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFS 147
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ D ++ + LI+MY + G + ARKVF + E+ + ++NA A + +E L L +
Sbjct: 148 YESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVK 207
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFS-VYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
M GI D T+ ++S FS + +K EI + GY+ ++
Sbjct: 208 DMKLLGIKPDVITWN-----ALISGFSHMRNEEKVSEILELMCLDGYKPDV--------- 253
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSV 291
VSW+++I N KA + F QM+ PNS
Sbjct: 254 ----------------------VSWTSIISGLVHNFQNEKAFDAFKQMLTHGL--YPNSA 289
Query: 292 TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV 351
T++++ +HG+ + GL+ V +AL+ MYG+CG IS +F K
Sbjct: 290 TIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKT 349
Query: 352 KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
V++NS+I Y N+G KA+++F+ M G +++F +L ACSHAGL + G+
Sbjct: 350 PKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQ 409
Query: 412 ILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRI 471
LF M +KYRI P +EHYACMVDLLGRA +L EA ++I+ M EP VWG+LL +CR
Sbjct: 410 NLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRN 469
Query: 472 HCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCS 531
H N ELA A+ L ELEP N+GN +LL +YA A W V ++K++ K+ ++ G S
Sbjct: 470 HGNMELARIAAKHLAELEPENSGNGLLLTSLYANAGSWESVVRMKKMIKKKRFRRFLGSS 529
Query: 532 WIEV 535
W+E
Sbjct: 530 WVET 533
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 113/407 (27%), Positives = 191/407 (46%), Gaps = 50/407 (12%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
LI++ + F GR +H +LV SG+ + +A KL+ Y E G + ARKVFDE +R
Sbjct: 22 LIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRD 81
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
I A A G +E L+ +R+M G+ D F +LKA ++ + GK
Sbjct: 82 ISGCVVMIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKA----SRNLLDREFGK 137
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
IH +L+ YE + ++++L+D+Y+KFG + A VF + ++ V ++AMI YA N
Sbjct: 138 MIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNS 197
Query: 268 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV 327
+AL L M L P+ +T ++ + GF R + + +
Sbjct: 198 QADEALNLVKDMKLLGIK--PDVITWNAL---------------ISGFSHMRNEEKVSEI 240
Query: 328 INALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV 387
+ + D K PDVVSW S+IS +N +KA F+ M+ G+
Sbjct: 241 LELM---------------CLDGYK-PDVVSWTSIISGLVHNFQNEKAFDAFKQMLTHGL 284
Query: 388 SPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY----ACMVDLLGRANRL 443
P+ + IT+L AC+ ++ GK + Y + G+E + + ++D+ G+ +
Sbjct: 285 YPNSATIITLLPACTTLAYMKHGK-----EIHGYSVVTGLEDHGFVRSALLDMYGKCGFI 339
Query: 444 DEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEP 490
EA+ L P TV + + C + N LA++A + ++E
Sbjct: 340 SEAMILFRKTP--KKTTVTFNSMIFC--YANHGLADKAVELFDQMEA 382
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/459 (30%), Positives = 234/459 (50%), Gaps = 12/459 (2%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
+P T + ++C + S +G+ +H + G D Y+ L++ Y G A K
Sbjct: 103 SPDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACK 162
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
VF E R + W G +E L+ + +M+ + + TY VL VS
Sbjct: 163 VFGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKMD---VEPNLATYVCVL----VSSG 215
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
V L GK IH IL+ ++ L+D+Y K +S A VF + K+ VSW++
Sbjct: 216 RVGCLSLGKGIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNS 275
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
MI + +A++LF M + I P+ + SV VH +IL
Sbjct: 276 MISGLVHCERSKEAIDLFSLM--QTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYIL 333
Query: 318 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
G+ + A++ MY +CG I +F+ +++ +V +WN+L+ +G+G ++++
Sbjct: 334 TAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLR 393
Query: 378 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK-YRIHPGMEHYACMVDL 436
FE M+ G P+ ++F+ L AC H GLV+EG+ F M S+ Y + P +EHY CM+DL
Sbjct: 394 YFEEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDL 453
Query: 437 LGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCN-AELAERASAMLFELEPWNAGN 495
L RA LDEA++L++ MP +P + G++L +C+ EL + ++E ++G
Sbjct: 454 LCRAGLLDEALELVKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGV 513
Query: 496 YVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIE 534
YVLL++I+A + W DV +R+LM + + KVPG S+IE
Sbjct: 514 YVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 184/392 (46%), Gaps = 20/392 (5%)
Query: 87 VLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRER 146
VL++ ++ SS + + L+ L +D + K++ + V +
Sbjct: 8 VLLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRS 67
Query: 147 TI--YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQ 204
+ + +N + A+ + + Y+ +G D FT+ V KAC +FS ++
Sbjct: 68 VLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKAC--GKFS--GIR 123
Query: 205 KGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYA 264
+GK+IH + + G+ ++I+V +L+ Y G A VF MP ++ VSW+ +I +
Sbjct: 124 EGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFT 183
Query: 265 KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI 324
+ + +AL+ F +M +E PN T V V +HG IL+R
Sbjct: 184 RTGLYKEALDTFSKMDVE-----PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLIS 238
Query: 325 MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM-I 383
+ NALI MY +C ++S RVF +++ D VSWNS+IS + K+AI +F M
Sbjct: 239 LETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQT 298
Query: 384 HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS---KYRIHPGMEHYACMVDLLGRA 440
G+ P +VL AC+ G V+ G+ + E +L+ K+ H G +VD+ +
Sbjct: 299 SSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIG----TAIVDMYAKC 354
Query: 441 NRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
++ A+++ + + T W +LLG IH
Sbjct: 355 GYIETALEIFNGIRSKNVFT-WNALLGGLAIH 385
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 150/505 (29%), Positives = 245/505 (48%), Gaps = 32/505 (6%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L++ L + K+ ++V N PS + ++++C + + DG+ +H + +G
Sbjct: 75 LVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNG 134
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
L Y+ T L+ +Y LG ++ A+K FD+ E+ WN+ G +E ++
Sbjct: 135 LCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFD 194
Query: 173 QM------NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY-------- 218
++ +W+ I S + AC S FS PL+ NIL GY
Sbjct: 195 KIPEKDAVSWNLIISSYAKKGDMGNAC--SLFSAMPLKSPASW--NILIGGYVNCREMKL 250
Query: 219 ---------EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMP 269
++N T++ Y K G + A +FR M K+ + + AMI CY +N P
Sbjct: 251 ARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKP 310
Query: 270 VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 329
AL+LF QM+ P+ +T+ SV V +I G+ +
Sbjct: 311 KDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLST 370
Query: 330 ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 389
+LI +Y + G+ + ++F + D VS++++I G NG +A +F MI + + P
Sbjct: 371 SLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPP 430
Query: 390 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 449
+ ++F +L A SH+GLV+EG F SM + + P +HY MVD+LGRA RL+EA +L
Sbjct: 431 NVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYEL 489
Query: 450 IEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMW 509
I+ MP +P VWG+LL + +H N E E A + +LE G LA IY+ W
Sbjct: 490 IKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRW 549
Query: 510 SDVKSVRKLMGKRVLQKVPGCSWIE 534
D ++VR + ++ L K GCSW+E
Sbjct: 550 DDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 169/384 (44%), Gaps = 30/384 (7%)
Query: 149 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 208
+ W R L+ + +E +++Y M+ SGIP T VL+AC E V GK
Sbjct: 70 FSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMV----DGKP 125
Query: 209 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDM 268
IHA L++G ++V T L+ +Y++ G I A F + KN+VSW++++ Y ++
Sbjct: 126 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGE 185
Query: 269 PVKALELFHQ----------MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI-- 316
+A +F + +++ + + S+ + G++
Sbjct: 186 LDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNC 245
Query: 317 ----LRRGLDSIMPVINA-----LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 367
L R MP N +I+ Y + G++ E +F + D + ++++I+ Y
Sbjct: 246 REMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYT 305
Query: 368 NNGYGKKAIQIFENMIHQG--VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 425
NG K A+++F M+ + + P I+ +V+ A S G G + ES ++++ I
Sbjct: 306 QNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV-ESYITEHGIKI 364
Query: 426 GMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERA-SAM 484
++DL + +A K+ ++ + + +++ C I+ A A +AM
Sbjct: 365 DDLLSTSLIDLYMKGGDFAKAFKMFSNLN-KKDTVSYSAMIMGCGINGMATEANSLFTAM 423
Query: 485 LFELEPWNAGNYVLLADIYAEAKM 508
+ + P N + L Y+ + +
Sbjct: 424 IEKKIPPNVVTFTGLLSAYSHSGL 447
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 235 bits (599), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 238/492 (48%), Gaps = 40/492 (8%)
Query: 93 AQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGS-LDCARKVFDETRERTIYIW 151
Q S+ + + +H L+ +GL D A++++ S ++ A VF + ++W
Sbjct: 33 TQCSTMRELKQIHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVW 92
Query: 152 NAFFRALAMVGRGEELLELYRQMNWSG--IPSDRFTYTYVLKACVVSEFSVYPLQKGKEI 209
N R + E + ++ M S + R TY V KA + + G+++
Sbjct: 93 NTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKA----YGRLGQARDGRQL 148
Query: 210 HANILRHGYEENIHVMTTLLDVYAKFGC-------------------------------I 238
H +++ G E++ + T+L +Y GC I
Sbjct: 149 HGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLI 208
Query: 239 SYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXX 298
A ++F MP +N VSW++MI + +N AL++F +M + D P+ TMVS+
Sbjct: 209 DQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREM--QEKDVKPDGFTMVSLLN 266
Query: 299 XXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVS 358
+H +I+R + V+ ALI MY +CG I G VF+ +
Sbjct: 267 ACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC 326
Query: 359 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 418
WNS+I NNG+ ++A+ +F + G+ P +SFI VL AC+H+G V F M
Sbjct: 327 WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMK 386
Query: 419 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
KY I P ++HY MV++LG A L+EA LI++MP E +W SLL +CR N E+A
Sbjct: 387 EKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMA 446
Query: 479 ERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKK 538
+RA+ L +L+P YVLL++ YA ++ + R LM +R ++K GCS IEV +
Sbjct: 447 KRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFE 506
Query: 539 IYSFVSSEEDNP 550
++ F+S +P
Sbjct: 507 VHEFISCGGTHP 518
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 110/232 (47%), Gaps = 12/232 (5%)
Query: 36 INPSANPVKDIKSXXXXXXXQLIQSLCRGGNHKQALEVL--WSERN--PSHKTIEVLIQS 91
I+ + N ++ +I R G K AL++ E++ P T+ L+ +
Sbjct: 208 IDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA 267
Query: 92 CAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIW 151
CA + GR +H Y+V + + + + T LI+MY + G ++ VF+ ++ + W
Sbjct: 268 CAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCW 327
Query: 152 NAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHA 211
N+ LA G E ++L+ ++ SG+ D ++ VL AC S + + E
Sbjct: 328 NSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSG----EVHRADEFF- 382
Query: 212 NILRHGY--EENIHVMTTLLDVYAKFGCISYANSVFRAMPA-KNSVSWSAMI 260
+++ Y E +I T +++V G + A ++ + MP +++V WS+++
Sbjct: 383 RLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLL 434
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 234 bits (598), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 152/471 (32%), Positives = 224/471 (47%), Gaps = 74/471 (15%)
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
G+L A K+FDE + + I N R A + E+ + LY +M G+ DR+T+T+VL
Sbjct: 60 GALKYAHKLFDEIPKPDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVL 119
Query: 191 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLL--------------------- 229
KAC E+ G H ++RHG+ N +V L+
Sbjct: 120 KACSKLEWR----SNGFAFHGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAK 175
Query: 230 ----------DVYAKFGCISYANSVFRAMPAKNSVSWSAMI-GCYAKNDM---------- 268
YAK G I A +F MP K+ V+W+ MI GC +M
Sbjct: 176 AHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRF 235
Query: 269 --------------------PVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXX 308
P +AL +F +M P+ VT++S+
Sbjct: 236 TEKDVVTWNAMISGYVNCGYPKEALGIFKEM--RDAGEHPDVVTILSLLSACAVLGDLET 293
Query: 309 XXXVHGFILRRGLDSI-----MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLI 363
+H +IL S P+ NALI MY +CG I VF VK+ D+ +WN+LI
Sbjct: 294 GKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLI 353
Query: 364 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 423
+ + + +I++FE M V P+ ++FI V+ ACSH+G V+EG+ F M Y I
Sbjct: 354 VGLALH-HAEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNI 412
Query: 424 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 483
P ++HY CMVD+LGRA +L+EA +E M EP VW +LLG+C+I+ N EL + A+
Sbjct: 413 EPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGACKIYGNVELGKYANE 472
Query: 484 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIE 534
L + +G+YVLL++IYA W V+ VRK+ ++K G S IE
Sbjct: 473 KLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 131/312 (41%), Gaps = 26/312 (8%)
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKF----GCISYANSVFRAMPAKNSVSWSAMIGC 262
K+IHA+++ +G N+ V+ L +Y+ G + YA+ +F +P + + ++
Sbjct: 29 KQIHASMVVNGLMSNLSVVGEL--IYSASLSVPGALKYAHKLFDEIPKPDVSICNHVLRG 86
Query: 263 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 322
A++ P K + L+ +M E P+ T V HG ++R G
Sbjct: 87 SAQSMKPEKTVSLYTEM--EKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFV 144
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM 382
V NALI + CG++ I +FD V+W+S+ S Y G +A+++F+ M
Sbjct: 145 LNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEM 204
Query: 383 IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANR 442
++ +++ ++ C ++ + LF+ K + + M+
Sbjct: 205 PYK----DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVV-----TWNAMISGYVNCGY 255
Query: 443 LDEAI---KLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYV-- 497
EA+ K + D P SLL +C + + E +R + E ++ YV
Sbjct: 256 PKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGT 315
Query: 498 ----LLADIYAE 505
L D+YA+
Sbjct: 316 PIWNALIDMYAK 327
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 102/218 (46%), Gaps = 18/218 (8%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I G K+AL + R+ P TI L+ +CA G+ +H Y++++
Sbjct: 246 MISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETA 305
Query: 113 -LDQDPYLAT----KLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEEL 167
+ Y+ T LI+MY + GS+D A +VF ++R + WN LA+ E
Sbjct: 306 SVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLAL-HHAEGS 364
Query: 168 LELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY--EENIHVM 225
+E++ +M + + T+ V+ AC S + +G++ + +++R Y E NI
Sbjct: 365 IEMFEEMQRLKVWPNEVTFIGVILACSHSG----RVDEGRK-YFSLMRDMYNIEPNIKHY 419
Query: 226 TTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIGC 262
++D+ + G + A +M + N++ W ++G
Sbjct: 420 GCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLLGA 457
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/439 (31%), Positives = 212/439 (48%), Gaps = 45/439 (10%)
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
++++ L T +IN Y L AR+ FD + ER I +WN +G E L+
Sbjct: 55 VEKNVVLWTSMINGYLLNKDLVSARRYFDLSPERDIVLWNTMISGYIEMGNMLEARSLFD 114
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
QM P + ++ T+L+ Y
Sbjct: 115 QM---------------------------PCR----------------DVMSWNTVLEGY 131
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
A G + VF MP +N SW+ +I YA+N + L F +MV E +PN T
Sbjct: 132 ANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEG-SVVPNDAT 190
Query: 293 MVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI-MPVINALITMYGRCGEISIGERVFDKV 351
M V VH + G + + + V NALI MYG+CG I I VF +
Sbjct: 191 MTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGI 250
Query: 352 KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
K D++SWN++I+ +G+G +A+ +F M + G+SP ++F+ VLCAC H GLVE+G
Sbjct: 251 KRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGL 310
Query: 412 ILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRI 471
F SM + + I P +EH C+VDLL RA L +A++ I MP + +W +LLG+ ++
Sbjct: 311 AYFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKV 370
Query: 472 HCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCS 531
+ ++ E A L +LEP N N+V+L++IY +A + D ++ M +K G S
Sbjct: 371 YKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVS 430
Query: 532 WIEVKKKIYSFVSSEEDNP 550
WIE + F SS E +P
Sbjct: 431 WIETDDGLVKFYSSGEKHP 449
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 149/347 (42%), Gaps = 45/347 (12%)
Query: 106 RYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGE 165
R L D +D ++ Y +G ++ +VFD+ ER ++ WN + A GR
Sbjct: 110 RSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVS 169
Query: 166 ELLELYRQMNWSG--IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE-NI 222
E+L +++M G +P+D T T VL AC + GK +H GY + ++
Sbjct: 170 EVLGSFKRMVDEGSVVPNDA-TMTLVLSACA----KLGAFDFGKWVHKYGETLGYNKVDV 224
Query: 223 HVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLE 282
+V L+D+Y K G I A VF+ + ++ +SW+ MI A + +AL LFH+M
Sbjct: 225 NVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNS 284
Query: 283 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 342
P+ VT V V H ++ GL N++ T + S
Sbjct: 285 GIS--PDKVTFVGVLCACK-----------HMGLVEDGL----AYFNSMFT------DFS 321
Query: 343 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
I P++ ++ + G+ +A++ M V + + T+L A
Sbjct: 322 I---------MPEIEHCGCVVDLLSRAGFLTQAVEFINKM---PVKADAVIWATLLGASK 369
Query: 403 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 449
V+ G++ E ++ +P ++ + ++ G A R D+A +L
Sbjct: 370 VYKKVDIGEVALEELIKLEPRNPA--NFVMLSNIYGDAGRFDDAARL 414
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 38/215 (17%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQ-DPYLATKLINMYHELGSLDCARK 138
P+ T+ +++ +CA+ +F G+ VH+Y G ++ D + LI+MY + G+++ A +
Sbjct: 186 PNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAME 245
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC----- 193
VF + R + WN LA G G E L L+ +M SGI D+ T+ VL AC
Sbjct: 246 VFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGL 305
Query: 194 ----------VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANS 243
+ ++FS+ P I ++D+ ++ G ++ A
Sbjct: 306 VEDGLAYFNSMFTDFSIMP------------------EIEHCGCVVDLLSRAGFLTQAVE 347
Query: 244 VFRAMPAK-NSVSWSAMIGC---YAKNDMPVKALE 274
MP K ++V W+ ++G Y K D+ ALE
Sbjct: 348 FINKMPVKADAVIWATLLGASKVYKKVDIGEVALE 382
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 157/549 (28%), Positives = 251/549 (45%), Gaps = 75/549 (13%)
Query: 64 GGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKL 123
G H++ + +W + T+ +++ A+ ++ G +H LV +G D + + L
Sbjct: 111 GEMHRKEKDDIWID----DFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSL 166
Query: 124 INMYHELG---------------------------------SLDCARKVFDETRERTIYI 150
I+MY + G +D A VF E I
Sbjct: 167 IHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTI 226
Query: 151 -WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEI 209
WN A G EE L++ M +G+ D ++ VL V+S S+ L+ GKE+
Sbjct: 227 SWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLN--VLS--SLKSLKIGKEV 282
Query: 210 HANILRHGYEENIHVMTTLLDVYAKFGCISYANS-------------------------- 243
HA +L++G N V + ++DVY K G + YA S
Sbjct: 283 HARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKM 342
Query: 244 -----VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXX 298
+F ++ KN V W+AM Y P LEL + ++ P+S+ MVSV
Sbjct: 343 VEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNT-PDSLVMVSVLG 401
Query: 299 XXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVS 358
+HG LR G+ ++ A + MY +CG + ER+FD D V
Sbjct: 402 ACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVM 461
Query: 359 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 418
+N++I+ ++G+ K+ Q FE+M G P I+F+ +L AC H GLV EG+ F+SM+
Sbjct: 462 YNAMIAGCAHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMI 521
Query: 419 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP-FEPGPTVWGSLLGSCRIHCNAEL 477
Y I P HY CM+DL G+A RLD+AI+L+E + E + G+ L +C + N EL
Sbjct: 522 EAYNISPETGHYTCMIDLYGKAYRLDKAIELMEGIDQVEKDAVILGAFLNACSWNKNTEL 581
Query: 478 AERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKK 537
+ L +E N Y+ +A+ YA + W +++ +R M + L+ GCSW + K
Sbjct: 582 VKEVEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDK 641
Query: 538 KIYSFVSSE 546
+ + F SS+
Sbjct: 642 QFHMFTSSD 650
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 95/474 (20%), Positives = 177/474 (37%), Gaps = 108/474 (22%)
Query: 100 DGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALA 159
DG H + SG + +L+N+Y + G L AR VFDE ER +Y WNA A
Sbjct: 6 DGFLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYV 65
Query: 160 MVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACV------------------------- 194
+E EL+ N D TY +L
Sbjct: 66 KFNNVKEARELFESDN---CERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIW 122
Query: 195 VSEFSVYPLQK----------GKEIHANILRHGYEENIHVMTTLLDVYAKFG-------- 236
+ +F+V + K G+++H +++ G + +++L+ +Y+K G
Sbjct: 123 IDDFTVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNI 182
Query: 237 ----CISYANSVFR-AMPA---------------------KNSVSWSAMIGCYAKNDMPV 270
C+ + +SV R AM A +++SW+ +I YA+N
Sbjct: 183 FNGSCVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEE 242
Query: 271 KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINA 330
+AL++ + +E + + +V VH +L+ G S V +
Sbjct: 243 EALKM--AVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSG 300
Query: 331 LITMYGRCGEISIGE-------------------------------RVFDKVKNPDVVSW 359
++ +Y +CG + E R+FD + ++V W
Sbjct: 301 IVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVW 360
Query: 360 NSLISMYGNNGYGKKAIQIFENMI-HQGVSPSYISFITVLCACSHAGLVEEGKILFESML 418
++ Y N +++ I ++ +P + ++VL ACS +E GK + L
Sbjct: 361 TAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSL 420
Query: 419 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
+ I + VD+ + ++ A ++ D FE ++ +++ C H
Sbjct: 421 -RTGILMDKKLVTAFVDMYSKCGNVEYAERIF-DSSFERDTVMYNAMIAGCAHH 472
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/513 (29%), Positives = 241/513 (46%), Gaps = 51/513 (9%)
Query: 81 SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDP--YLATKLINMYHELGSLDCARK 138
S++ + +L++ CA +S G+++H L SGL + P YL+ L Y G + A+K
Sbjct: 5 SYQKVRLLLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQK 64
Query: 139 VFDET--RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVS 196
+FDE E+ W + + G ++L+ +M + D + + C
Sbjct: 65 LFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKL 124
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS----------------- 239
E L ++ H ++ G ++ V L+D+Y K G +S
Sbjct: 125 E----DLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSW 180
Query: 240 --------------YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 285
VF MP +N+V+W+ M+ Y + LEL +MV C
Sbjct: 181 TVVLDTVVKWEGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFR-CG 239
Query: 286 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL--------DSIMPVINALITMYGR 337
N VT+ S+ VH + L++ + D +M V AL+ MY +
Sbjct: 240 HGLNFVTLCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVM-VGTALVDMYAK 298
Query: 338 CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
CG I VF ++ +VV+WN+L S +G G+ I +F MI + V P ++F V
Sbjct: 299 CGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAV 357
Query: 398 LCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEP 457
L ACSH+G+V+EG F S L Y + P ++HYACMVDLLGRA ++EA L+ +MP P
Sbjct: 358 LSACSHSGIVDEGWRCFHS-LRFYGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPP 416
Query: 458 GPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRK 517
V GSLLGSC +H E+AER L ++ P N +L++++Y +R
Sbjct: 417 NEVVLGSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRG 476
Query: 518 LMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
+ KR ++K+PG S I V ++ F S + +P
Sbjct: 477 SLRKRGIRKIPGLSSIYVNDSVHRFSSGDRSHP 509
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 232 bits (592), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 235/452 (51%), Gaps = 44/452 (9%)
Query: 136 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 195
A KVFDE E + A R E + ++++ GI + FT+ V+ +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 196 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN------------- 242
S ++ GK++H L+ G N+ V + +L+ Y K ++ A
Sbjct: 106 SR----DVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVS 161
Query: 243 ------------------SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
S+FRAMP ++ V+W+A+IG +++ +A+ F M+ E
Sbjct: 162 ITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGV 221
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR-RGLDSIMPVINALITMYGRCGEISI 343
IPN T +H ++ G + V N+LI+ Y +CG +
Sbjct: 222 -VIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMED 280
Query: 344 GERVFDKVKNP--DVVSWNSLISMYGNNGYGKKAIQIFENMIHQ-GVSPSYISFITVLCA 400
F+K++ ++VSWNS+I Y +NG G++A+ +FE M+ + P+ ++ + VL A
Sbjct: 281 SLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFA 340
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGM---EHYACMVDLLGRANRLDEAIKLIEDMPFEP 457
C+HAGL++EG + F ++ Y P + EHYACMVD+L R+ R EA +LI+ MP +P
Sbjct: 341 CNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDP 399
Query: 458 GPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRK 517
G W +LLG C+IH N LA+ A++ + EL+P + +YV+L++ Y+ + W +V +R+
Sbjct: 400 GIGFWKALLGGCQIHSNKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRR 459
Query: 518 LMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDN 549
M + L++ GCSWIEV+ +I FV+++++N
Sbjct: 460 KMKETGLKRFTGCSWIEVRDQIRVFVNADKNN 491
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 112/253 (44%), Gaps = 42/253 (16%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T +I S G+ +H Y + GL + ++ + ++N Y +L +L AR+
Sbjct: 91 PNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRC 150
Query: 140 FDETR-------------------------------ERTIYIWNAFFRALAMVGRGEELL 168
FD+TR ER++ WNA + GR EE +
Sbjct: 151 FDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAV 210
Query: 169 ELYRQMNWSG--IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRH-GYEENIHVM 225
+ M G IP++ T+ +S + + GK IHA ++ G N+ V
Sbjct: 211 NTFVDMLREGVVIPNES---TFPCAITAISNIASHG--AGKSIHACAIKFLGKRFNVFVW 265
Query: 226 TTLLDVYAKFGCISYANSVFRAM--PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
+L+ Y+K G + + F + +N VSW++MI YA N +A+ +F +MV +
Sbjct: 266 NSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDT 325
Query: 284 CDSIPNSVTMVSV 296
+ PN+VT++ V
Sbjct: 326 -NLRPNNVTILGV 337
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 8/198 (4%)
Query: 238 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSV 296
I A+ VF +P + +S +A+IG + K V+A + F +++ C I PN T +V
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLL---CLGIRPNEFTFGTV 99
Query: 297 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV 356
+H + L+ GL S + V +A++ Y + ++ R FD ++P+V
Sbjct: 100 IGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNV 159
Query: 357 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFES 416
VS +LIS Y ++A+ +F M + V +++ V+ S G EE F
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 417 MLSKYRIHPGMEHYACMV 434
ML + + P + C +
Sbjct: 216 MLREGVVIPNESTFPCAI 233
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 145/478 (30%), Positives = 229/478 (47%), Gaps = 41/478 (8%)
Query: 74 LWSERNPSHK-TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGS 132
L E N S++ T ++ +CA S+ G VH +V SG + Y+ + LI+MY +
Sbjct: 218 LRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCRE 277
Query: 133 LDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA 192
++ AR + + + WN+ G E L ++ +M+ + D FT +L
Sbjct: 278 MESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNC 337
Query: 193 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN 252
+S ++ H I++ GY V L+D+YAK G + A VF M K+
Sbjct: 338 FALSR---TEMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKD 394
Query: 253 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV 312
+SW+A++ N +AL+LF M + P+ + SV V
Sbjct: 395 VISWTALVTGNTHNGSYDEALKLFCNMRVGGI--TPDKIVTASVLSASAELTLLEFGQQV 452
Query: 313 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 372
HG ++ G S + V N+L+TMY +CG + +F+ ++ D+++W LI Y NG
Sbjct: 453 HGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG-- 510
Query: 373 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 432
L+E+ + F+SM + Y I PG EHYAC
Sbjct: 511 ---------------------------------LLEDAQRYFDSMRTVYGITPGPEHYAC 537
Query: 433 MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWN 492
M+DL GR+ + +L+ M EP TVW ++L + R H N E ERA+ L ELEP N
Sbjct: 538 MIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNN 597
Query: 493 AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
A YV L+++Y+ A + +VR+LM R + K PGCSW+E K K++SF+S + +P
Sbjct: 598 AVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHP 655
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 170/380 (44%), Gaps = 33/380 (8%)
Query: 101 GR-DVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALA 159
GR D R + D ++D + +I Y L A K+F + WNA
Sbjct: 42 GRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYC 101
Query: 160 MVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE 219
G E L+ +M GI + +T VL+ C S+ L +G++IH + ++ G++
Sbjct: 102 KSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCT----SLVLLLRGEQIHGHTIKTGFD 157
Query: 220 ENIHVMTTLLDVYAKFGCISYANSVFRAMPA-KNSVSWSAMIGCYAKNDMPVKALELFHQ 278
+++V+ LL +YA+ IS A +F M KN+V+W++M+ Y++N KA+E F
Sbjct: 158 LDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRD 217
Query: 279 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 338
+ E S N T SV VH I++ G + + V +ALI MY +C
Sbjct: 218 LRREGNQS--NQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKC 275
Query: 339 GEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM------IHQGVSPSYI 392
E+ + + ++ DVVSWNS+I G +A+ +F M I PS +
Sbjct: 276 REMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
Query: 393 SFITV------LCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 446
+ + + + +H +V+ G + Y++ +VD+ + +D A
Sbjct: 336 NCFALSRTEMKIASSAHCLIVKTG-------YATYKLVNN-----ALVDMYAKRGIMDSA 383
Query: 447 IKLIEDMPFEPGPTVWGSLL 466
+K+ E M E W +L+
Sbjct: 384 LKVFEGM-IEKDVISWTALV 402
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 122/253 (48%), Gaps = 7/253 (2%)
Query: 219 EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 278
E + T++ Y+ +S A +FR+ P KN++SW+A+I Y K+ V+A LF +
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 279 MVLEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR 337
M D I PN T+ SV +HG ++ G D + V+N L+ MY +
Sbjct: 116 M---QSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQ 172
Query: 338 CGEISIGERVFDKVKN-PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFIT 396
C IS E +F+ ++ + V+W S+++ Y NG+ KAI+ F ++ +G + +F +
Sbjct: 173 CKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPS 232
Query: 397 VLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE 456
VL AC+ G + + K + + ++D+ + ++ A L+E M +
Sbjct: 233 VLTACASVSACRVG-VQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVD 291
Query: 457 PGPTVWGSLLGSC 469
W S++ C
Sbjct: 292 D-VVSWNSMIVGC 303
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 244/483 (50%), Gaps = 20/483 (4%)
Query: 82 HKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLD----CAR 137
H++ + LI + + ++ + H + GL ++ Y +KL+ + L +L+ A
Sbjct: 8 HQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYAS 67
Query: 138 KVFDETRERTIYIWNAFFRALAMVGR---GEELLELYRQMNWSGIPSDRFTYTYVLKACV 194
+FD ++++ R + + G L + I T+ +++ AC+
Sbjct: 68 SIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACL 127
Query: 195 VSEFSVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS 253
+ F GK+IH ++++G + + HV T +L +Y + + A VF +P +
Sbjct: 128 KACF----FSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDV 183
Query: 254 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 313
V W ++ Y + + + LE+F +M+++ + P+ ++ + +H
Sbjct: 184 VKWDVLMNGYVRCGLGSEGLEVFREMLVKGLE--PDEFSVTTALTACAQVGALAQGKWIH 241
Query: 314 GFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 372
F+ ++ ++S + V AL+ MY +CG I VF K+ +V SW +LI Y GY
Sbjct: 242 EFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYA 301
Query: 373 KKAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
KKA+ E + + G+ P + + VL AC+H G +EEG+ + E+M ++Y I P EHY+
Sbjct: 302 KKAMTCLERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYS 361
Query: 432 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPW 491
C+VDL+ RA RLD+A+ LIE MP +P +VWG+LL CR H N EL E A L +LE
Sbjct: 362 CIVDLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKG 421
Query: 492 NA----GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEE 547
N V L++IY + + VR ++ +R ++K PG S +EV + FVS +
Sbjct: 422 NVEEEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDV 481
Query: 548 DNP 550
+P
Sbjct: 482 SHP 484
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 117/220 (53%), Gaps = 9/220 (4%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLD-QDPYLATKLINMYHELGSLDCARK 138
PS+ T LI +C + FS G+ +H ++V +G+ D ++ T ++ +Y E L ARK
Sbjct: 114 PSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARK 173
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
VFDE + + W+ G G E LE++R+M G+ D F+ T L AC
Sbjct: 174 VFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACA---- 229
Query: 199 SVYPLQKGKEIHANILRHGY-EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
V L +GK IH + + + E ++ V T L+D+YAK GCI A VF+ + +N SW+
Sbjct: 230 QVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWA 289
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSV 296
A+IG YA KA+ + LE D I P+SV ++ V
Sbjct: 290 ALIGGYAAYGYAKKAMTCLER--LEREDGIKPDSVVLLGV 327
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 117/274 (42%), Gaps = 13/274 (4%)
Query: 57 LIQSLCRGGNHKQALEV----LWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYL-VDS 111
L+ R G + LEV L P ++ + +CAQ + + G+ +H ++ S
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLE-L 170
++ D ++ T L++MY + G ++ A +VF + R ++ W A A G ++ + L
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCL 308
Query: 171 YRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANI-LRHGYEENIHVMTTLL 229
R GI D VL AC F L++G+ + N+ R+ + ++
Sbjct: 309 ERLEREDGIKPDSVVLLGVLAACAHGGF----LEEGRSMLENMEARYEITPKHEHYSCIV 364
Query: 230 DVYAKFGCISYANSVFRAMPAKNSVS-WSAMI-GCYAKNDMPVKALELFHQMVLEACDSI 287
D+ + G + A ++ MP K S W A++ GC ++ + L + + + LE +
Sbjct: 365 DLMCRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVE 424
Query: 288 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 321
+V + V G I +RG+
Sbjct: 425 EEEAALVQLSNIYFSVQRNPEASKVRGMIEQRGV 458
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/390 (33%), Positives = 206/390 (52%), Gaps = 13/390 (3%)
Query: 167 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMT 226
LL+ + S D F+ + +K + S G++IHA + + G+ I + T
Sbjct: 48 LLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLD---GRQIHALVRKLGFNAVIQIQT 104
Query: 227 TLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 285
+L+ Y+ G + YA VF P K N V W+AMI Y +N+ V+A+ELF +M E +
Sbjct: 105 SLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIE 164
Query: 286 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGE 345
VT+ +R L + + N+L+ MY + GE
Sbjct: 165 LDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKAR 224
Query: 346 RVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENM--IHQG----VSPSYISFITVLC 399
++FD+ DV ++ S+I Y NG ++++++F+ M I Q ++P+ ++FI VL
Sbjct: 225 KLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLM 284
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 459
ACSH+GLVEEGK F+SM+ Y + P H+ CMVDL R+ L +A + I MP +P
Sbjct: 285 ACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNT 344
Query: 460 TVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 519
+W +LLG+C +H N EL E +FEL+ + G+YV L++IYA MW + +R +
Sbjct: 345 VIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRV 404
Query: 520 GKRVLQKVPGCSWIEVKKKIYSFVSSEEDN 549
KR ++PG SWIE+ I FVS ++N
Sbjct: 405 RKR---RMPGKSWIELGSIINEFVSGPDNN 431
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 157/366 (42%), Gaps = 46/366 (12%)
Query: 91 SCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRER-TIY 149
S AQK+S DGR +H + G + + T L+ Y +G +D AR+VFDET E+ I
Sbjct: 74 SSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIV 133
Query: 150 IWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEI 209
+W A A E +EL+++M I D T L AC + +Q G+EI
Sbjct: 134 LWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACA----DLGAVQMGEEI 189
Query: 210 HANILRHGYE--ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
++ ++ ++ + +LL++Y K G A +F K+ ++++MI YA N
Sbjct: 190 YSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNG 249
Query: 268 MPVKALELFHQM--VLEACDSI--PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 323
++LELF +M + ++ D++ PN VT + V H ++ G
Sbjct: 250 QAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACS-----------HSGLVEEGKRH 298
Query: 324 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI 383
+I D P + ++ ++ +G+ K A + M
Sbjct: 299 FKSMI-------------------MDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQM- 338
Query: 384 HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 443
+ P+ + + T+L ACS G VE G+ + + R H G Y + ++
Sbjct: 339 --PIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVG--DYVALSNIYASKGMW 394
Query: 444 DEAIKL 449
DE K+
Sbjct: 395 DEKSKM 400
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/434 (31%), Positives = 217/434 (50%), Gaps = 7/434 (1%)
Query: 115 QDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM 174
+D +++ Y + G +D A K+F + + + W L R E L+L++ M
Sbjct: 157 KDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNM 216
Query: 175 NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK 234
I S +T V+ AC + G ++H I++ G+ +V +L+ YA
Sbjct: 217 LRCCIKSTSRPFTCVITACA----NAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYAN 272
Query: 235 FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMV 294
I + VF + W+A++ Y+ N AL +F M+ + +PN T
Sbjct: 273 CKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSI--LPNQSTFA 330
Query: 295 SVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNP 354
S +HG ++ GL++ V N+L+ MY G ++ VF K+
Sbjct: 331 SGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKK 390
Query: 355 DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILF 414
+VSWNS+I +G GK A IF MI P I+F +L ACSH G +E+G+ LF
Sbjct: 391 SIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLF 450
Query: 415 ESMLSKYR-IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHC 473
M S I ++HY CMVD+LGR +L EA +LIE M +P VW +LL +CR+H
Sbjct: 451 YYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHS 510
Query: 474 NAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 533
+ + E+A+A +F L+ ++ YVLL++IYA A WS+V +R M K + K PG SW+
Sbjct: 511 DVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Query: 534 EVKKKIYSFVSSEE 547
++ K + F S ++
Sbjct: 571 VIRGKKHEFFSGDQ 584
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 153/365 (41%), Gaps = 26/365 (7%)
Query: 119 LATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG 178
L TK+I Y L A +FDE R + WN+ G ++L+ +M
Sbjct: 68 LYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMPERS 127
Query: 179 IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE-ENIHVMTTLLDVYAKFGC 237
+ S +T ++ C + GK A L + ++ +++ Y +FG
Sbjct: 128 VVS----WTAMVNGC---------FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQFGK 174
Query: 238 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 297
+ A +F+ MP KN +SW+ MI +N+ +AL+LF M+ C S V
Sbjct: 175 VDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML--RCCIKSTSRPFTCVI 232
Query: 298 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 357
VHG I++ G V +LIT Y C I +VFD+ + V
Sbjct: 233 TACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVA 292
Query: 358 SWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM 417
W +L+S Y N + A+ IF M+ + P+ +F + L +CS G ++ GK
Sbjct: 293 VWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGK-----E 347
Query: 418 LSKYRIHPGMEHYA----CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHC 473
+ + G+E A +V + + +++A+ + + F+ W S++ C H
Sbjct: 348 MHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHG 406
Query: 474 NAELA 478
+ A
Sbjct: 407 RGKWA 411
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 141/302 (46%), Gaps = 14/302 (4%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
+I +CA +F G VH ++ G + Y++ LI Y + +RKVFDE
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ 290
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
+ +W A ++ + E+ L ++ M + I ++ T+ L +C ++ L GK
Sbjct: 291 VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCS----ALGTLDWGK 346
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
E+H ++ G E + V +L+ +Y+ G ++ A SVF + K+ VSW+++I A++
Sbjct: 347 EMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHG 406
Query: 268 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV 327
A +F QM+ + P+ +T + + + + G++ I
Sbjct: 407 RGKWAFVIFGQMI--RLNKEPDEITFTGLLSACSHCGFLEKGRKLF-YYMSSGINHIDRK 463
Query: 328 I---NALITMYGRCGEISIGERVFDK-VKNPDVVSWNSLIS---MYGNNGYGKKAIQIFE 380
I ++ + GRCG++ E + ++ V P+ + W +L+S M+ + G+KA
Sbjct: 464 IQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIF 523
Query: 381 NM 382
N+
Sbjct: 524 NL 525
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T + SC+ + G+++H V GL+ D ++ L+ MY + G+++ A V
Sbjct: 324 PNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSV 383
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F + +++I WN+ A GRG+ ++ QM D T+T +L AC F
Sbjct: 384 FIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGF- 442
Query: 200 VYPLQKGKEIH---ANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVS 255
L+KG+++ ++ + H + I T ++D+ + G + A + M K N +
Sbjct: 443 ---LEKGRKLFYYMSSGINH-IDRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMV 498
Query: 256 WSAMI-GCYAKNDM 268
W A++ C +D+
Sbjct: 499 WLALLSACRMHSDV 512
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 113/262 (43%), Gaps = 44/262 (16%)
Query: 221 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI-GCYAKNDMPVKALELFHQM 279
++ + T ++ Y + + A ++F MP ++ VSW++MI GC DM A++LF +M
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNT-AVKLFDEM 123
Query: 280 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV-----INALITM 334
S+ + MV+ L MPV N+++
Sbjct: 124 PER---SVVSWTAMVNGCFRSGKVDQAER------------LFYQMPVKDTAAWNSMVHG 168
Query: 335 YGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISF 394
Y + G++ ++F ++ +V+SW ++I N +A+ +F+NM+ + + F
Sbjct: 169 YLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPF 228
Query: 395 ITVLCACSHA----------GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLD 444
V+ AC++A GL+ + L+E +S A ++ R+
Sbjct: 229 TCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVS-----------ASLITFYANCKRIG 277
Query: 445 EAIKLIEDMPFEPGPTVWGSLL 466
++ K+ ++ E VW +LL
Sbjct: 278 DSRKVFDEKVHEQ-VAVWTALL 298
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/483 (28%), Positives = 243/483 (50%), Gaps = 20/483 (4%)
Query: 82 HKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLD----CAR 137
H++ + LI + + ++ + H + GL ++ Y +KL+ + L +L+ A
Sbjct: 8 HQSWKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYAS 67
Query: 138 KVFDETRERTIYIWNAFFRALAMVGR---GEELLELYRQMNWSGIPSDRFTYTYVLKACV 194
+FD ++++ R + + G L + I T+ +++ AC+
Sbjct: 68 SIFDSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACL 127
Query: 195 VSEFSVYPLQKGKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS 253
+ F GK+IH ++++G + + HV T +L +Y + + A VF +P +
Sbjct: 128 KACF----FSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDV 183
Query: 254 VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVH 313
V W ++ Y + + + LE+F +M++ + P+ ++ + +H
Sbjct: 184 VKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIE--PDEFSVTTALTACAQVGALAQGKWIH 241
Query: 314 GFILR-RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 372
F+ + R ++S + V AL+ MY +CG I VF+K+ +V SW +LI Y GY
Sbjct: 242 EFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYA 301
Query: 373 KKAIQIFENMIHQ-GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
KKA + + + G+ P + + VL AC+H G +EEG+ + E+M ++Y I P EHY+
Sbjct: 302 KKATTCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYS 361
Query: 432 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPW 491
C+VDL+ RA RLD+A+ LIE MP +P +VWG+LL CR H N EL E A L +LE
Sbjct: 362 CIVDLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKG 421
Query: 492 NA----GNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEE 547
N V L++IY + + VR ++ +R ++K PG S +EV + FVS +
Sbjct: 422 NVEEEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDV 481
Query: 548 DNP 550
+P
Sbjct: 482 SHP 484
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 115/221 (52%), Gaps = 9/221 (4%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLD-QDPYLATKLINMYHELGSLDCAR 137
PS+ T LI +C + FS G+ +H ++V +G+ D ++ T ++ +Y E L AR
Sbjct: 113 TPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDAR 172
Query: 138 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
KVFDE + + W+ G G E LE++++M GI D F+ T L AC
Sbjct: 173 KVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACA--- 229
Query: 198 FSVYPLQKGKEIHANILRHGY-EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 256
V L +GK IH + + + E ++ V T L+D+YAK GCI A VF + +N SW
Sbjct: 230 -QVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSW 288
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSI-PNSVTMVSV 296
+A+IG YA KA + +E D I P+SV ++ V
Sbjct: 289 AALIGGYAAYGYAKKATTCLDR--IEREDGIKPDSVVLLGV 327
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 116/274 (42%), Gaps = 13/274 (4%)
Query: 57 LIQSLCRGGNHKQALEV----LWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L+ R G + LEV L P ++ + +CAQ + + G+ +H ++
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 113 -LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLE-L 170
++ D ++ T L++MY + G ++ A +VF++ R ++ W A A G ++ L
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCL 308
Query: 171 YRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANI-LRHGYEENIHVMTTLL 229
R GI D VL AC F L++G+ + N+ R+G + ++
Sbjct: 309 DRIEREDGIKPDSVVLLGVLAACAHGGF----LEEGRTMLENMEARYGITPKHEHYSCIV 364
Query: 230 DVYAKFGCISYANSVFRAMPAKNSVS-WSAMI-GCYAKNDMPVKALELFHQMVLEACDSI 287
D+ + G + A + MP K S W A++ GC ++ + L + + + LE +
Sbjct: 365 DLMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVE 424
Query: 288 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 321
+V + V G I +RG+
Sbjct: 425 EEEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGI 458
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 227 bits (579), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 154/489 (31%), Positives = 242/489 (49%), Gaps = 41/489 (8%)
Query: 94 QKSSFSDGRDVHRYLVDSGL-DQDPYLATKL-INMYHELGSLDCARKVFDETRERTIYIW 151
Q S S+ +H L+ GL +++P+++ L + G +D A K + + Y W
Sbjct: 17 QCKSMSELYKIHTLLITLGLSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSDPPNYGW 76
Query: 152 NAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHA 211
N R + E+ + +Y QM G+ D TY +++K+ S S L G +H
Sbjct: 77 NFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSS--SRLSNRKL--GGSLHC 132
Query: 212 NILRHGYEENIHVMTTL-------------------------------LDVYAKFGCISY 240
++++ G E ++ + TL LD YAK G +
Sbjct: 133 SVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVS 192
Query: 241 ANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXX 300
A VF M ++ V+WS+MI Y K KALE+F QM + S N VTMVSV
Sbjct: 193 ARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQM-MRMGSSKANEVTMVSVICAC 251
Query: 301 XXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK--VKNPDVVS 358
VH +IL L + + +LI MY +CG I VF + VK D +
Sbjct: 252 AHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALM 311
Query: 359 WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESML 418
WN++I ++G+ ++++Q+F M + P I+F+ +L ACSH GLV+E F+S L
Sbjct: 312 WNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKS-L 370
Query: 419 SKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELA 478
+ P EHYACMVD+L RA + +A I +MP +P ++ G+LL C H N ELA
Sbjct: 371 KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELA 430
Query: 479 ERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKK 538
E L EL+P N G YV LA++YA K + +S+R+ M K+ ++K+ G S +++
Sbjct: 431 ETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGT 490
Query: 539 IYSFVSSEE 547
+ F++ ++
Sbjct: 491 RHRFIAHDK 499
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 40/249 (16%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P H T L++S ++ S+ G +H +V SGL+ D ++ LI+MY ARK+
Sbjct: 106 PDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKL 165
Query: 140 FDETRERTIYIWNAFFRALAMVG-----------------------------RGE--ELL 168
FDE + + WN+ A A G RGE + L
Sbjct: 166 FDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKAL 225
Query: 169 ELYRQMNWSGIP-SDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
E++ QM G ++ T V+ AC + L +GK +H IL + + T+
Sbjct: 226 EIFDQMMRMGSSKANEVTMVSVICACA----HLGALNRGKTVHRYILDVHLPLTVILQTS 281
Query: 228 LLDVYAKFGCISYANSVFRAMPAK--NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 285
L+D+YAK G I A SVF K +++ W+A+IG A + ++L+LFH+M D
Sbjct: 282 LIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKID 341
Query: 286 SIPNSVTMV 294
P+ +T +
Sbjct: 342 --PDEITFL 348
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/475 (27%), Positives = 233/475 (49%), Gaps = 8/475 (1%)
Query: 77 ERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCA 136
E P+ V+ +SC+ +G+ H + GL ++ L+ MY A
Sbjct: 131 ESRPNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEA 190
Query: 137 RKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVS 196
+V D+ + ++++ G +E L++ R+ + TY L+
Sbjct: 191 IRVLDDLPYCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRL---- 246
Query: 197 EFS-VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 255
FS + L ++H+ ++R G+ + L+++Y K G + YA VF A+N
Sbjct: 247 -FSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFL 305
Query: 256 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 315
+ ++ Y ++ +AL LF +M + + PN T + +HG
Sbjct: 306 NTTIMDAYFQDKSFEEALNLFSKM--DTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGL 363
Query: 316 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKA 375
+L+ G + + V NAL+ MY + G I + F + D+V+WN++IS ++G G++A
Sbjct: 364 VLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREA 423
Query: 376 IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 435
++ F+ MI G P+ I+FI VL ACSH G VE+G F ++ K+ + P ++HY C+V
Sbjct: 424 LEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVG 483
Query: 436 LLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGN 495
LL +A +A + P E W +LL +C + N L ++ + E P ++G
Sbjct: 484 LLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGV 543
Query: 496 YVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
YVLL++I+A+++ W V VR LM R ++K PG SWI ++ + + F++ + +P
Sbjct: 544 YVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHP 598
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 103/416 (24%), Positives = 191/416 (45%), Gaps = 15/416 (3%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLV---DSGLDQDPYLATKLINMYHELGSLDCARKVFDETR 144
L++ CA S G +H +L+ S +D Y LIN+Y + ARK+FD
Sbjct: 37 LLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFDLMP 96
Query: 145 ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS-DRFTYTYVLKACVVSEFSVYPL 203
ER + W A + G E+L+L++ M +SG + F T V K+C S +
Sbjct: 97 ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSG----RI 152
Query: 204 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCY 263
++GK+ H L++G + V TL+ +Y+ A V +P + +S+ + Y
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALSGY 212
Query: 264 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 323
+ + L++ + E D + N++T +S VH ++R G ++
Sbjct: 213 LECGAFKEGLDVLRKTANE--DFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNA 270
Query: 324 IMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI 383
+ ALI MYG+CG++ +RVFD ++ +++ Y + ++A+ +F M
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMD 330
Query: 384 HQGVSPSYISFITVLCACSHAGLVEEGKILFESML-SKYRIHPGMEHYACMVDLLGRANR 442
+ V P+ +F +L + + L+++G +L +L S YR H + + +V++ ++
Sbjct: 331 TKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGN--ALVNMYAKSGS 388
Query: 443 LDEAIKLIEDMPFEPGPTVWGSLLGSCRIH-CNAELAERASAMLFELEPWNAGNYV 497
+++A K M F T W +++ C H E E M+F E N ++
Sbjct: 389 IEDARKAFSGMTFRDIVT-WNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFI 443
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 147/500 (29%), Positives = 236/500 (47%), Gaps = 50/500 (10%)
Query: 57 LIQSLCRGGNHKQALEVL----WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I L G QAL++ + P+ TI + +C+ + G +VH V G
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
D + L++MY + G L+ ARKVFD + + +Y WN+ G + EL+
Sbjct: 383 FIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+M AN+ NI T++ Y
Sbjct: 443 RMQ----------------------------------DANL-----RPNIITWNTMISGY 463
Query: 233 AKFGCISYANSVFRAMPA-----KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 287
K G A +F+ M +N+ +W+ +I Y +N +ALELF +M + +
Sbjct: 464 IKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM--QFSRFM 521
Query: 288 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 347
PNSVT++S+ +HG +LRR LD+I V NAL Y + G+I +
Sbjct: 522 PNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTI 581
Query: 348 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLV 407
F ++ D+++WNSLI Y +G A+ +F M QG++P+ + +++ A G V
Sbjct: 582 FLGMETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNV 641
Query: 408 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
+EGK +F S+ + Y I P +EH + MV L GRANRL+EA++ I++M + +W S L
Sbjct: 642 DEGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLT 701
Query: 468 SCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKV 527
CRIH + ++A A+ LF LEP N +++ IYA K +L+K
Sbjct: 702 GCRIHGDIDMAIHAAENLFSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKP 761
Query: 528 PGCSWIEVKKKIYSFVSSEE 547
G SWIEV+ I++F + ++
Sbjct: 762 LGQSWIEVRNLIHTFTTGDQ 781
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/385 (26%), Positives = 166/385 (43%), Gaps = 40/385 (10%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
++Q CA G+ +H ++ G+ ++ ++ +Y + G LD A K F RER
Sbjct: 187 ILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERD 246
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
+ WN+ A G+ EE +EL ++M GI T+
Sbjct: 247 VIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW--------------------- 285
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
NIL GY + + +D+ K VF +W+AMI N
Sbjct: 286 ----NILIGGYNQ-LGKCDAAMDLMQKMETFGITADVF---------TWTAMISGLIHNG 331
Query: 268 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV 327
M +AL++F +M L +PN+VT++S VH ++ G + V
Sbjct: 332 MRYQALDMFRKMFLAGV--VPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 328 INALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV 387
N+L+ MY +CG++ +VFD VKN DV +WNS+I+ Y GY KA ++F M +
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANL 449
Query: 388 SPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAI 447
P+ I++ T++ G E LF+ M ++ + ++ + + DEA+
Sbjct: 450 RPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEAL 509
Query: 448 KLIEDMPFE---PGPTVWGSLLGSC 469
+L M F P SLL +C
Sbjct: 510 ELFRKMQFSRFMPNSVTILSLLPAC 534
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 205/442 (46%), Gaps = 59/442 (13%)
Query: 61 LCRGGN---HKQALEVLWSERNPSHKTIEV-LIQSCAQKSSFSDGRDVHRYLVDSGLDQD 116
LCR G+ ++AL+ L+ + + ++ + L++SC S GR +H GL +
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRILHARF---GLFTE 112
Query: 117 P--YLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM 174
P ++ TKL++MY + G + ARKVFD RER ++ W+A A + R E+ +L+R M
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 175 NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK 234
G+ D F + +L+ C + ++ GK IH+ +++ G + V ++L VYAK
Sbjct: 173 MKDGVLPDDFLFPKILQGCA----NCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAK 228
Query: 235 FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMV 294
G + +A FR M ++ ++W++++ Y +N +A+EL +M E
Sbjct: 229 CGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKE------------ 276
Query: 295 SVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-- 352
G+ + N LI Y + G+ + K++
Sbjct: 277 -------------------------GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETF 311
Query: 353 --NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
DV +W ++IS +NG +A+ +F M GV P+ ++ ++ + ACS ++ +G
Sbjct: 312 GITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQG 371
Query: 411 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCR 470
+ S+ K + +VD+ + +L++A K+ + + + T W S++
Sbjct: 372 SEV-HSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYT-WNSMITG-- 427
Query: 471 IHCNAELAERASAMLFELEPWN 492
+C A +A + ++ N
Sbjct: 428 -YCQAGYCGKAYELFTRMQDAN 448
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/457 (30%), Positives = 236/457 (51%), Gaps = 23/457 (5%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
LI C S + + +H ++ GL Y +KL+++ + L A + + +
Sbjct: 15 LISKC---KSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTV-CLSYALSILRQIPNPS 70
Query: 148 IYIWNAFFRALAMVGRGEEL---LELYRQMNWSG---IPSDRFTYTYVLKACVVSEFSVY 201
++++N ++ + LY Q+ S + + FTY + KA S F
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKA---SGFDAQ 127
Query: 202 PLQKGKEIHANILR--HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
+ G+ +HA++L+ + V L+ YA G + A S+F + + +W+ +
Sbjct: 128 WHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTL 187
Query: 260 IGCYAKN---DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
+ YA + D + L LF +M + PN +++V++ H ++
Sbjct: 188 LAAYANSEEIDSDEEVLLLFMRMQVR-----PNELSLVALIKSCANLGEFVRGVWAHVYV 242
Query: 317 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 376
L+ L V +LI +Y +CG +S +VFD++ DV +N++I +G+G++ I
Sbjct: 243 LKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGI 302
Query: 377 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 436
++++++I QG+ P +F+ + ACSH+GLV+EG +F SM + Y I P +EHY C+VDL
Sbjct: 303 ELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDL 362
Query: 437 LGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNY 496
LGR+ RL+EA + I+ MP +P T+W S LGS + H + E E A L LE N+GNY
Sbjct: 363 LGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNY 422
Query: 497 VLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 533
VLL++IYA W+DV+ R+LM + K PG S +
Sbjct: 423 VLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 99/205 (48%), Gaps = 5/205 (2%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ ++ LI+SCA F G H Y++ + L + ++ T LI++Y + G L ARKV
Sbjct: 214 PNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKV 273
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FDE +R + +NA R LA+ G G+E +ELY+ + G+ D T+ + AC S
Sbjct: 274 FDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLV 333
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSA 258
LQ + A +G E + L+D+ + G + A + MP K N+ W +
Sbjct: 334 DEGLQIFNSMKA---VYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRS 390
Query: 259 MIG-CYAKNDMPVKALELFHQMVLE 282
+G D + L H + LE
Sbjct: 391 FLGSSQTHGDFERGEIALKHLLGLE 415
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 134/418 (32%), Positives = 224/418 (53%), Gaps = 11/418 (2%)
Query: 119 LATKLINMYHELGSL-DCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW- 176
L++KL+ Y +L L + VF R I+ WN + G + ++L+ +M W
Sbjct: 68 LSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM-WR 126
Query: 177 -SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKF 235
S + D FT +L+AC S + G IH L+ G+ ++ V + L+ +Y
Sbjct: 127 ESCVRPDDFTLPLILRACSASR----EAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDM 182
Query: 236 GCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVS 295
G + +A +F MP ++SV ++AM G Y + + L +F +M +SV MVS
Sbjct: 183 GKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGF--ALDSVVMVS 240
Query: 296 VXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPD 355
+ VHG+ +RR + + NA+ MY +C + VF + D
Sbjct: 241 LLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRD 300
Query: 356 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE 415
V+SW+SLI YG +G + ++F+ M+ +G+ P+ ++F+ VL AC+H GLVE+ + F
Sbjct: 301 VISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFR 360
Query: 416 SMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNA 475
++ +Y I P ++HYA + D + RA L+EA K +EDMP +P V G++L C+++ N
Sbjct: 361 -LMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNV 419
Query: 476 ELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 533
E+ ER + L +L+P A YV LA +Y+ A + + +S+R+ M ++ + KVPGCS I
Sbjct: 420 EVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCSSI 477
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 119/245 (48%), Gaps = 11/245 (4%)
Query: 57 LIQSLCRGGNHKQALEV---LWSER--NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
+I R G +++++ +W E P T+ +++++C+ G +H +
Sbjct: 104 IIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKL 163
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
G ++++ L+ MY ++G L ARK+FD+ R ++ A F G L ++
Sbjct: 164 GFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMF 223
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
R+M +SG D +L AC + L+ GK +H +R +++ + D+
Sbjct: 224 REMGYSGFALDSVVMVSLLMACG----QLGALKHGKSVHGWCIRRCSCLGLNLGNAITDM 279
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSV 291
Y K + YA++VF M ++ +SWS++I Y + V + +LF +M+ E + PN+V
Sbjct: 280 YVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIE--PNAV 337
Query: 292 TMVSV 296
T + V
Sbjct: 338 TFLGV 342
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 225 bits (574), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 149/473 (31%), Positives = 239/473 (50%), Gaps = 25/473 (5%)
Query: 85 IEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLIN--MYHELGSLDCARKVFDE 142
+E +IQ C SFS + + + + +G Q +L ++L+ G L A ++F
Sbjct: 6 METMIQKCV---SFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRY 62
Query: 143 TRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSGIPSDRFTYTYVLKACVVS 196
+ WNA R A YR M + + D T ++ LKAC +
Sbjct: 63 IPKPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARA 122
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 256
S ++H I R G + + TTLLD Y+K G + A +F MP ++ SW
Sbjct: 123 LCS----SAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASW 178
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV-HGF 315
+A+I + +A+EL+ +M E + VT+V+ + HG+
Sbjct: 179 NALIAGLVSGNRASEAMELYKRMETEGIRR--SEVTVVAALGACSHLGDVKEGENIFHGY 236
Query: 316 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDK-VKNPDVVSWNSLISMYGNNGYGKK 374
D+++ V NA I MY +CG + +VF++ VV+WN++I+ + +G +
Sbjct: 237 ----SNDNVI-VSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHR 291
Query: 375 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 434
A++IF+ + G+ P +S++ L AC HAGLVE G +F +M K + M+HY C+V
Sbjct: 292 ALEIFDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVV 350
Query: 435 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAG 494
DLL RA RL EA +I M P P +W SLLG+ I+ + E+AE AS + E+ N G
Sbjct: 351 DLLSRAGRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDG 410
Query: 495 NYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEE 547
++VLL+++YA W DV VR M + ++K+PG S+IE K I+ F +S++
Sbjct: 411 DFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDK 463
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 123/283 (43%), Gaps = 14/283 (4%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T +++CA+ S +H + GL D L T L++ Y + G L A K+FDE
Sbjct: 111 TCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEM 170
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
R + WNA L R E +ELY++M GI T L AC + +
Sbjct: 171 PVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACS----HLGDV 226
Query: 204 QKGKEIHANILRHGY-EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS-VSWSAMIG 261
++G+ I HGY +N+ V +D+Y+K G + A VF K S V+W+ MI
Sbjct: 227 KEGENIF-----HGYSNDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMIT 281
Query: 262 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 321
+A + +ALE+F + LE P+ V+ ++ V + +G+
Sbjct: 282 GFAVHGEAHRALEIFDK--LEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGV 339
Query: 322 DSIMPVINALITMYGRCGEISIGERVFDKVKN-PDVVSWNSLI 363
+ M ++ + R G + + + PD V W SL+
Sbjct: 340 ERNMKHYGCVVDLLSRAGRLREAHDIICSMSMIPDPVLWQSLL 382
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/491 (29%), Positives = 241/491 (49%), Gaps = 37/491 (7%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T +I++CA F+ GR VH + S + Y+ LI+MY G +D AR++FD
Sbjct: 186 TYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM 245
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV-------------- 189
ER WNA + E +L +M SG+ + T+ +
Sbjct: 246 SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGAL 305
Query: 190 -----LKACVVSEFSVY------------PLQKGKEIHANILRH-GYEENI-HVMTTLLD 230
++ C V SV L+ GK H ++R + +I +V +L+
Sbjct: 306 NCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLIT 365
Query: 231 VYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
+Y++ + +A VF+ + A + +W+++I +A N+ + L +M+L PN
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH--PNH 423
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIGERVFD 349
+T+ S+ H +ILRR + + N+L+ MY + GEI +RVFD
Sbjct: 424 ITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Query: 350 KVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE 409
++ D V++ SLI YG G G+ A+ F++M G+ P +++ + VL ACSH+ LV E
Sbjct: 484 SMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVRE 543
Query: 410 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
G LF M + I +EHY+CMVDL RA LD+A + +P+EP + +LL +C
Sbjct: 544 GHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKAC 603
Query: 470 RIHCNAELAE-RASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 528
IH N + E A +L E +P + G+Y+LLAD+YA WS + +V+ L+ +QK
Sbjct: 604 LIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAH 663
Query: 529 GCSWIEVKKKI 539
+ +E ++
Sbjct: 664 EFALMETDSEL 674
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 176/401 (43%), Gaps = 39/401 (9%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
L+ +C + F G+ +H + + SGL+ D L KL+ Y LD A+ + + +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
WN + R +E + +Y++M GI +D FTY V+KAC ++ G+
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACA----ALLDFAYGR 204
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
+H +I + N++V L+ +Y +FG + A +F M +++VSW+A+I CY +
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 268 MPVKALELFHQMVLEA---------------------------------CDSIPNSVTMV 294
+A +L +M L C+ SV M+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 295 SVXXXXXXXXXXXXXXXVHGFILRRGLDS--IMPVINALITMYGRCGEISIGERVFDKVK 352
+ H ++R S I V N+LITMY RC ++ VF +V+
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 353 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 412
+ +WNS+IS + N ++ + + M+ G P++I+ ++L + G ++ GK
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 413 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
+L + + + +VD+ ++ + A ++ + M
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 28/202 (13%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPY-LATKLINMYHEL 130
E+L S +P+H T+ ++ A+ + G++ H Y++ +D L L++MY +
Sbjct: 413 EMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKS 472
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
G + A++VFD R+R + + +G+GE L ++ M+ SGI D T VL
Sbjct: 473 GEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVL 532
Query: 191 KACVVSEFSVYPLQKGKEIHANILRHG---YEENIHVM---------TTLLDVYAKFGCI 238
AC H+N++R G + + HV + ++D+Y + G +
Sbjct: 533 SACS---------------HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYL 577
Query: 239 SYANSVFRAMPAKNSVSWSAMI 260
A +F +P + S + A +
Sbjct: 578 DKARDIFHTIPYEPSSAMCATL 599
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 146/491 (29%), Positives = 241/491 (49%), Gaps = 37/491 (7%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T +I++CA F+ GR VH + S + Y+ LI+MY G +D AR++FD
Sbjct: 186 TYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM 245
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYV-------------- 189
ER WNA + E +L +M SG+ + T+ +
Sbjct: 246 SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGAL 305
Query: 190 -----LKACVVSEFSVY------------PLQKGKEIHANILRH-GYEENI-HVMTTLLD 230
++ C V SV L+ GK H ++R + +I +V +L+
Sbjct: 306 NCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLIT 365
Query: 231 VYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
+Y++ + +A VF+ + A + +W+++I +A N+ + L +M+L PN
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFH--PNH 423
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRR-GLDSIMPVINALITMYGRCGEISIGERVFD 349
+T+ S+ H +ILRR + + N+L+ MY + GEI +RVFD
Sbjct: 424 ITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Query: 350 KVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE 409
++ D V++ SLI YG G G+ A+ F++M G+ P +++ + VL ACSH+ LV E
Sbjct: 484 SMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVRE 543
Query: 410 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
G LF M + I +EHY+CMVDL RA LD+A + +P+EP + +LL +C
Sbjct: 544 GHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCATLLKAC 603
Query: 470 RIHCNAELAE-RASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 528
IH N + E A +L E +P + G+Y+LLAD+YA WS + +V+ L+ +QK
Sbjct: 604 LIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAH 663
Query: 529 GCSWIEVKKKI 539
+ +E ++
Sbjct: 664 EFALMETDSEL 674
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 176/401 (43%), Gaps = 39/401 (9%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERT 147
L+ +C + F G+ +H + + SGL+ D L KL+ Y LD A+ + + +
Sbjct: 89 LLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH 148
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
WN + R +E + +Y++M GI +D FTY V+KAC ++ G+
Sbjct: 149 PLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACA----ALLDFAYGR 204
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
+H +I + N++V L+ +Y +FG + A +F M +++VSW+A+I CY +
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 268 MPVKALELFHQMVLEA---------------------------------CDSIPNSVTMV 294
+A +L +M L C+ SV M+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 295 SVXXXXXXXXXXXXXXXVHGFILRRGLDS--IMPVINALITMYGRCGEISIGERVFDKVK 352
+ H ++R S I V N+LITMY RC ++ VF +V+
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 353 NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 412
+ +WNS+IS + N ++ + + M+ G P++I+ ++L + G ++ GK
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 413 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
+L + + + +VD+ ++ + A ++ + M
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSM 485
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 28/202 (13%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPY-LATKLINMYHEL 130
E+L S +P+H T+ ++ A+ + G++ H Y++ +D L L++MY +
Sbjct: 413 EMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKS 472
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVL 190
G + A++VFD R+R + + +G+GE L ++ M+ SGI D T VL
Sbjct: 473 GEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVL 532
Query: 191 KACVVSEFSVYPLQKGKEIHANILRHG---YEENIHVM---------TTLLDVYAKFGCI 238
AC H+N++R G + + HV + ++D+Y + G +
Sbjct: 533 SACS---------------HSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYL 577
Query: 239 SYANSVFRAMPAKNSVSWSAMI 260
A +F +P + S + A +
Sbjct: 578 DKARDIFHTIPYEPSSAMCATL 599
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 152/508 (29%), Positives = 253/508 (49%), Gaps = 27/508 (5%)
Query: 57 LIQSLCRGGNHKQAL---EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGL 113
LI + GN ++ + S P+ T+ ++ SC + G+ VH + GL
Sbjct: 133 LITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSC----RYEPGKQVHGLALKLGL 188
Query: 114 DQDPYLATKLINMY---HELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLEL 170
Y+A +I+MY H+ + A VF+ + + + WN+ A G++ + +
Sbjct: 189 HCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGV 248
Query: 171 YRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK---EIHANILRHGYEENIHVMTT 227
+ +M+ G+ DR T + + S + P + K ++H+ ++ G V T
Sbjct: 249 FMRMHSDGVGFDRATLLNICSSLYKSS-DLVPNEVSKCCLQLHSLTVKSGLVTQTEVATA 307
Query: 228 LLDVYAKFGCISYAN--SVFRAMP-AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
L+ VY++ Y + +F M ++ V+W+ +I +A D P +A+ LF Q+ E
Sbjct: 308 LIKVYSEM-LEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKL 365
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 344
P+ T SV +H +++ G + + N+LI Y +CG + +
Sbjct: 366 S--PDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLC 423
Query: 345 ERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA 404
RVFD + + DVVSWNS++ Y +G + +F+ M ++P +FI +L ACSHA
Sbjct: 424 MRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHA 480
Query: 405 GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGS 464
G VEEG +F SM K P + HYAC++D+L RA R EA ++I+ MP +P VW +
Sbjct: 481 GRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIA 540
Query: 465 LLGSCRIHCNAELAERASAMLFEL-EPWNAGNYVLLADIY-AEAKMWSDVKSVRKLMGKR 522
LLGSCR H N L + A+ L EL EP N+ +Y+ +++IY AE S++++ R
Sbjct: 541 LLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWR 600
Query: 523 VLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
V +K P SW E+ K++ F S P
Sbjct: 601 V-RKEPDLSWTEIGNKVHEFASGGRHRP 627
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 208/447 (46%), Gaps = 63/447 (14%)
Query: 58 IQSLCRGGNHKQALEVLWSE--RNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGL-- 113
+++L R G+ ++A+ + +S S + L Q+CA++ + DG ++H +++
Sbjct: 33 LRTLVRSGDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCY 92
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQ 173
Q+ LA LINMY + G++ AR+VFD ER + W A G +E L+
Sbjct: 93 SQNVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSS 152
Query: 174 MNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYA 233
M P++ FT + VL +C + GK++H L+ G +I+V ++ +Y
Sbjct: 153 MLSHCFPNE-FTLSSVLTSC--------RYEPGKQVHGLALKLGLHCSIYVANAVISMYG 203
Query: 234 KF--GCISY-ANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM----------- 279
+ G +Y A +VF A+ KN V+W++MI + ++ KA+ +F +M
Sbjct: 204 RCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRAT 263
Query: 280 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 339
+L C S+ S +V +H ++ GL + V ALI +Y
Sbjct: 264 LLNICSSLYKSSDLVP-------NEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEML 316
Query: 340 E-ISIGERVFDKVKN-PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
E + ++F ++ + D+V+WN +I+ + ++AI +F + + +SP + +F +V
Sbjct: 317 EDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSV 375
Query: 398 LCACSHAGLVE------------EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDE 445
L AC AGLV +G L +++L+ IH YA + LD
Sbjct: 376 LKAC--AGLVTARHALSIHAQVIKGGFLADTVLNNSLIHA----YA-------KCGSLDL 422
Query: 446 AIKLIEDMPFEPGPTVWGSLLGSCRIH 472
+++ +DM W S+L + +H
Sbjct: 423 CMRVFDDMD-SRDVVSWNSMLKAYSLH 448
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 222 bits (566), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 156/534 (29%), Positives = 246/534 (46%), Gaps = 72/534 (13%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNP----SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI+ + +A+E+ RN + T+ +I +C+ D R + +
Sbjct: 144 LIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLK 203
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
L+ +++T L++MY L ARK+FDE ER + WN + G E+ EL+
Sbjct: 204 LEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFD 263
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQ---------------------------K 205
Q+ I S L+ + E VY + K
Sbjct: 264 QITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSK 323
Query: 206 GKEIHANILRHGYEENIHVMTTLLDVYA-------------------------------K 234
G ++H I++ G++ + T++ YA K
Sbjct: 324 GLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVK 383
Query: 235 FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMV 294
G + A VF K+ SW+AMI YA++ P AL LF +M+ + P+++TMV
Sbjct: 384 NGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMI-SSSQVKPDAITMV 442
Query: 295 SVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN---ALITMYGRCGEISIGERVFDKV 351
SV H ++ +I P N A+I MY +CG I +F +
Sbjct: 443 SVFSAISSLGSLEEGKRAHDYL---NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQT 499
Query: 352 KN---PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
KN + WN++I +G+ K A+ ++ ++ + P+ I+F+ VL AC HAGLVE
Sbjct: 500 KNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVE 559
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
GK FESM S + I P ++HY CMVDLLG+A RL+EA ++I+ MP + +WG LL +
Sbjct: 560 LGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSA 619
Query: 469 CRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKR 522
R H N E+AE A+ L ++P + G V+L+++YA+A W DV VR+ M R
Sbjct: 620 SRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVALVREEMRTR 673
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 198/495 (40%), Gaps = 97/495 (19%)
Query: 77 ERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMY--------- 127
E + + + + + SCA + + GR +H ++ SGLD + Y+ ++NMY
Sbjct: 36 ESSDTERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADA 95
Query: 128 ----HELGSLDCAR------------------KVFDETRERTIYIWNAFFRALAMVGRGE 165
+ LD A K+FD ER+ + + A +
Sbjct: 96 ESVFRDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWS 155
Query: 166 ELLELYRQMNWSGIPSDRFTYTYVLKAC----------VVSEFSVYPLQKGKEIHANILR 215
E +EL+R+M GI + T V+ AC ++ ++ +G+ + L
Sbjct: 156 EAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLL 215
Query: 216 HGY-----------------EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
H Y E N+ +L+ Y+K G I A +F + K+ VSW
Sbjct: 216 HMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGT 275
Query: 259 MI-GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
MI GC KN + +AL + +M+ C P+ V MV + +HG I+
Sbjct: 276 MIDGCLRKNQLD-EALVYYTEML--RCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIV 332
Query: 318 RRGLD----------------------------SIMPVI---NALITMYGRCGEISIGER 346
+RG D S+ I NALI + + G +
Sbjct: 333 KRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQARE 392
Query: 347 VFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAG 405
VFD+ + D+ SWN++IS Y + + A+ +F MI V P I+ ++V A S G
Sbjct: 393 VFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLG 452
Query: 406 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTV--WG 463
+EEGK + L+ I P A ++D+ + ++ A+ + T+ W
Sbjct: 453 SLEEGKRAHD-YLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWN 511
Query: 464 SLLGSCRIHCNAELA 478
+++ H +A+LA
Sbjct: 512 AIICGSATHGHAKLA 526
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 94/208 (45%), Gaps = 36/208 (17%)
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF----------------------- 348
+H +L+ GLDS + N+++ MY +C ++ E VF
Sbjct: 63 IHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRR 122
Query: 349 --DKVKNPDV------VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
D +K DV VS+ +LI Y N +A+++F M + G+ + ++ TV+ A
Sbjct: 123 LWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISA 182
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT 460
CSH G + + ++L +S+ K ++ + ++ + L +A KL ++MP E
Sbjct: 183 CSHLGGIWDCRML-QSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMP-ERNLV 240
Query: 461 VWGSLLGSCRIHCNAELAERASAMLFEL 488
W +L + A L E+A + ++
Sbjct: 241 TWNVMLNG---YSKAGLIEQAEELFDQI 265
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 221 bits (563), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 144/468 (30%), Positives = 232/468 (49%), Gaps = 42/468 (8%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAM 160
G +H + SG + + Y+ T L++MY G A ++F++ +++ +NAF L
Sbjct: 148 GMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLME 207
Query: 161 VGRGEELLELYRQM-NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE 219
G + ++ M +S + T+ + AC S+ LQ G+++H +++ ++
Sbjct: 208 NGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACA----SLLNLQYGRQLHGLVMKKEFQ 263
Query: 220 ENIHVMTTLLDVYAKFGCISYANSVFRAMP-AKNSVSWSAMIGCYAKNDMPVKALELFHQ 278
V T L+D+Y+K C A VF + +N +SW+++I N A+ELF +
Sbjct: 264 FETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEK 323
Query: 279 M------------------------VLEACD---------SIPNSVTMVSVXXXXXXXXX 305
+ V+EA +P+ + S+
Sbjct: 324 LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWT 383
Query: 306 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV--KNPDVVSWNSLI 363
+HG +++ + + V+ +LI MY +CG S R+FD+ K D V WN +I
Sbjct: 384 LKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMI 443
Query: 364 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 423
S YG +G + AI+IFE + + V PS +F VL ACSH G VE+G +F M +Y
Sbjct: 444 SGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGY 503
Query: 424 HPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASA 483
P EH CM+DLLGR+ RL EA ++I+ M SLLGSCR H + L E A+
Sbjct: 504 KPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAM 562
Query: 484 MLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCS 531
L ELEP N +V+L+ IYA + W DV+S+R+++ ++ L K+PG S
Sbjct: 563 KLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/381 (27%), Positives = 182/381 (47%), Gaps = 17/381 (4%)
Query: 58 IQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDP 117
+ +L GG +L+V+ S +P+ T L++SCA+ GR +H +V +G D
Sbjct: 11 VSNLVTGGT---SLDVILS-HSPNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDV 66
Query: 118 YLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS 177
+ AT L++MY ++ + A KV DE ER I NA L G + ++ S
Sbjct: 67 FTATALVSMYMKVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVS 126
Query: 178 GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC 237
G + T VL C ++ G ++H ++ G+E ++V T+L+ +Y++ G
Sbjct: 127 GSGMNSVTVASVLGGC-------GDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGE 179
Query: 238 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 297
A +F +P K+ V+++A I +N + +F+ M + + PN VT V+
Sbjct: 180 WVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEE-PNDVTFVNAI 238
Query: 298 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNP-DV 356
+HG ++++ V ALI MY +C VF ++K+ ++
Sbjct: 239 TACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNL 298
Query: 357 VSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFES 416
+SWNS+IS NG + A+++FE + +G+ P ++ +++ S G V E FE
Sbjct: 299 ISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFER 358
Query: 417 MLSKYRIHPGMEHYACMVDLL 437
MLS + P ++ C+ LL
Sbjct: 359 MLSVVMV-PSLK---CLTSLL 375
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 94/194 (48%), Gaps = 7/194 (3%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
PS K + L+ +C+ + +G+++H +++ + ++D ++ T LI+MY + G AR++
Sbjct: 366 PSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRI 425
Query: 140 FD--ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
FD E + + WN G E +E++ + + T+T VL AC
Sbjct: 426 FDRFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACS--- 482
Query: 198 FSVYPLQKGKEIHANIL-RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 256
++KG +I + +GY+ + + ++D+ + G + A V M +S +
Sbjct: 483 -HCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY 541
Query: 257 SAMIGCYAKNDMPV 270
S+++G ++ PV
Sbjct: 542 SSLLGSCRQHLDPV 555
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 219 bits (558), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 132/471 (28%), Positives = 234/471 (49%), Gaps = 48/471 (10%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T+ L+ + A+ + G++V Y + + D LA+ +++MY + GS+ A+KVFD T
Sbjct: 377 TLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDST 436
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
E+ + +WN A A G E L L+ M G+P + T+ ++
Sbjct: 437 VEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLII------------- 483
Query: 204 QKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAM 259
++LR+G + A +F M + N +SW+ M
Sbjct: 484 -------LSLLRNGQ-------------------VDEAKDMFLQMQSSGIIPNLISWTTM 517
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
+ +N +A+ +M + PN+ ++ +HG+I+R
Sbjct: 518 MNGMVQNGCSEEAILFLRKM--QESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRN 575
Query: 320 -GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
S++ + +L+ MY +CG+I+ E+VF ++ N++IS Y G K+AI +
Sbjct: 576 LQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNAMISAYALYGNLKEAIAL 635
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
+ ++ G+ P I+ VL AC+HAG + + +F ++SK + P +EHY MVDLL
Sbjct: 636 YRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLA 695
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVL 498
A ++A++LIE+MPF+P + SL+ SC EL + S L E EP N+GNYV
Sbjct: 696 SAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVT 755
Query: 499 LADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEV--KKKIYSFVSSEE 547
+++ YA W +V +R++M + L+K PGCSWI++ ++ ++ FV++++
Sbjct: 756 ISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDK 806
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 197/396 (49%), Gaps = 11/396 (2%)
Query: 62 CRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDP 117
CR G + AL E+L +E P + + + ++C GR VH Y+V SGL+
Sbjct: 149 CRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCV 208
Query: 118 YLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS 177
++A+ L +MY + G LD A KVFDE +R WNA G+ EE + L+ M
Sbjct: 209 FVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQ 268
Query: 178 GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC 237
G+ R T + C+ + ++ +++GK+ HA + +G E + + T+LL+ Y K G
Sbjct: 269 GVEPTRVT----VSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGL 324
Query: 238 ISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVX 297
I YA VF M K+ V+W+ +I Y + + A+ + M LE + VT+ ++
Sbjct: 325 IEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY--DCVTLATLM 382
Query: 298 XXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVV 357
V + +R +S + + + ++ MY +CG I ++VFD D++
Sbjct: 383 SAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLI 442
Query: 358 SWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM 417
WN+L++ Y +G +A+++F M +GV P+ I++ ++ + G V+E K +F M
Sbjct: 443 LWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM 502
Query: 418 LSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
S I P + + M++ + + +EAI + M
Sbjct: 503 QSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKM 537
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 200/418 (47%), Gaps = 16/418 (3%)
Query: 58 IQSLCRGGNHKQALEVLWSERNPSHKTI--EV---LIQSCAQKSSFSDGRDVHRYLVDSG 112
+ SLC+ G K+AL L +E + + I E+ ++Q C + S G+ +H ++ +G
Sbjct: 42 VSSLCKNGEIKEALS-LVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNG 100
Query: 113 --LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLEL 170
++ Y+ TKL+ Y + +L+ A +F + R R ++ W A +G E L
Sbjct: 101 DFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMG 160
Query: 171 YRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLD 230
+ +M + I D F V KAC ++S + G+ +H +++ G E+ + V ++L D
Sbjct: 161 FVEMLENEIFPDNFVVPNVCKACGALKWSRF----GRGVHGYVVKSGLEDCVFVASSLAD 216
Query: 231 VYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
+Y K G + A+ VF +P +N+V+W+A++ Y +N +A+ LF M + + P
Sbjct: 217 MYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE--PTR 274
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK 350
VT+ + H + G++ + +L+ Y + G I E VFD+
Sbjct: 275 VTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDR 334
Query: 351 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
+ DVV+WN +IS Y G + AI + + M + + ++ T++ A + ++ G
Sbjct: 335 MFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLG 394
Query: 411 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
K + + ++ + + ++D+ + + +A K+ D E +W +LL +
Sbjct: 395 KEV-QCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF-DSTVEKDLILWNTLLAA 450
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 156/318 (49%), Gaps = 22/318 (6%)
Query: 154 FFRALAMVGRGE--ELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHA 211
F R ++ GE E L L +M++ + Y +L+ CV L GK+IHA
Sbjct: 39 FHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYER----DLSTGKQIHA 94
Query: 212 NILRHG--YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMP 269
IL++G Y N ++ T L+ YAK + A +F + +N SW+A+IG + +
Sbjct: 95 RILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLC 154
Query: 270 VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 329
AL F +M+ + P++ + +V VHG++++ GL+ + V +
Sbjct: 155 EGALMGFVEMLEN--EIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVAS 212
Query: 330 ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 389
+L MYG+CG + +VFD++ + + V+WN+L+ Y NG ++AI++F +M QGV P
Sbjct: 213 SLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEP 272
Query: 390 SYISFITVLCACSHAGLVEEGK-----ILFESMLSKYRIHPGMEHYACMVDLLGRANRLD 444
+ ++ T L A ++ G VEEGK + M + + ++ C V L+
Sbjct: 273 TRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLI------- 325
Query: 445 EAIKLIEDMPFEPGPTVW 462
E +++ D FE W
Sbjct: 326 EYAEMVFDRMFEKDVVTW 343
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLA--TKLINMYHELGSLDCAR 137
P+ +I V + +CA +S GR +H Y++ + L ++ T L++MY + G ++ A
Sbjct: 544 PNAFSITVALSACAHLASLHIGRTIHGYIIRN-LQHSSLVSIETSLVDMYAKCGDINKAE 602
Query: 138 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC 193
KVF + + NA A A+ G +E + LYR + G+ D T T VL AC
Sbjct: 603 KVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSAC 658
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 218 bits (556), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 206/416 (49%), Gaps = 5/416 (1%)
Query: 104 VHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGR 163
+H +V G+ D + T L+ Y G L A +++ ++ +I + A G
Sbjct: 268 LHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGD 327
Query: 164 GEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIH 223
+ + + + + D +L C S + G +H ++ G
Sbjct: 328 MDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSS----HIDIGMSLHGYAIKSGLCTKTL 383
Query: 224 VMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
V+ L+ +Y+KF + +F + +SW+++I ++ A E+FHQM+L
Sbjct: 384 VVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTG 443
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
+P+++T+ S+ +HG+ LR ++ V ALI MY +CG
Sbjct: 444 -GLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQ 502
Query: 344 GERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSH 403
E VF +K P +WNS+IS Y +G +A+ + M +G+ P I+F+ VL AC+H
Sbjct: 503 AESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNH 562
Query: 404 AGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWG 463
G V+EGKI F +M+ ++ I P ++HYA MV LLGRA EA+ LI M +P VWG
Sbjct: 563 GGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWG 622
Query: 464 SLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 519
+LL +C IH E+ E + +F L+ N G YVL++++YA MW DV VR +M
Sbjct: 623 ALLSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMM 678
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/392 (24%), Positives = 182/392 (46%), Gaps = 21/392 (5%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
+PS T+ L+ C Q S GR VH SGL+ D + LI+ Y + L A
Sbjct: 148 SPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEV 207
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
+F E ++++ WN A + G EE + +++ M + T +L A V E
Sbjct: 208 LFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHE- 266
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
PL H +++ G +I V+T+L+ Y++ GC+ A ++ + + V ++
Sbjct: 267 ---PL------HCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTS 317
Query: 259 MIGCYA-KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
++ CYA K DM + ++ + C I ++V +V + +HG+ +
Sbjct: 318 IVSCYAEKGDMDIAV--VYFSKTRQLCMKI-DAVALVGILHGCKKSSHIDIGMSLHGYAI 374
Query: 318 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
+ GL + V+N LITMY + ++ +F++++ ++SWNS+IS +G A +
Sbjct: 375 KSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFE 434
Query: 378 IF-ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC--MV 434
+F + M+ G+ P I+ ++L CS + GK L L R + E++ C ++
Sbjct: 435 VFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTL---RNNFENENFVCTALI 491
Query: 435 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
D+ + +A + + + P W S++
Sbjct: 492 DMYAKCGNEVQAESVFKSIK-APCTATWNSMI 522
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 184/406 (45%), Gaps = 28/406 (6%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGR----DVHRYLVDSGLDQDPYLATKLINMY 127
++L S P+H T+ + +Q A +SF+ + V +L SGLD+ Y+ T L+N+Y
Sbjct: 38 DLLRSSLTPNHFTMSIFLQ--ATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLY 95
Query: 128 HELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYT 187
+ G + A+ +FDE ER +WNA + G + +L+ M G T
Sbjct: 96 LKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLV 155
Query: 188 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 247
+L C F + +G+ +H + G E + V L+ Y+K + A +FR
Sbjct: 156 NLLPFCGQCGF----VSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFRE 211
Query: 248 MPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 307
M K++VSW+ MIG Y+++ + +A+ +F M + + P VT++++
Sbjct: 212 MKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISP--VTIINL------LSAHV 263
Query: 308 XXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYG 367
+H +++ G+ + + V+ +L+ Y RCG + ER++ K +V S++S Y
Sbjct: 264 SHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYA 323
Query: 368 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGM 427
G A+ F + ++ + +L C + ++ G L Y I G+
Sbjct: 324 EKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGM-----SLHGYAIKSGL 378
Query: 428 EHYACMVD----LLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
+V+ + + + ++ + L E + P + W S++ C
Sbjct: 379 CTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLIS-WNSVISGC 423
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/233 (29%), Positives = 129/233 (55%), Gaps = 4/233 (1%)
Query: 168 LELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
+ ++R + S + + FT + L+A S F+ + LQ +++ ++ + G + ++V T+
Sbjct: 33 ITIFRDLLRSSLTPNHFTMSIFLQATTTS-FNSFKLQV-EQVQTHLTKSGLDRFVYVKTS 90
Query: 228 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 287
LL++Y K GC++ A +F MP +++V W+A+I Y++N A +LF M+ +
Sbjct: 91 LLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFS-- 148
Query: 288 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 347
P++ T+V++ VHG + GL+ V NALI+ Y +C E+ E +
Sbjct: 149 PSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVL 208
Query: 348 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
F ++K+ VSWN++I Y +G ++AI +F+NM + V S ++ I +L A
Sbjct: 209 FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSA 261
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 128/403 (31%), Positives = 203/403 (50%), Gaps = 36/403 (8%)
Query: 162 GRGEELLELYRQMNWS-GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE 220
G E+ L L+ QM+ S +P D ++ LK+C + V G +HA+ ++ +
Sbjct: 26 GNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVL----GGSVHAHSVKSNFLS 81
Query: 221 NIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
N V LLD+Y K +S+A +F +P +N+V W+AMI Y +A+EL+ M
Sbjct: 82 NPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAMD 141
Query: 281 LEACDSI-------------------------------PNSVTMVSVXXXXXXXXXXXXX 309
+ +S PN +T++++
Sbjct: 142 VMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLI 201
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNN 369
+H + R ++ + + L+ YGRCG I + VFD +++ DVV+W+SLIS Y +
Sbjct: 202 KEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALH 261
Query: 370 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
G + A++ F+ M V+P I+F+ VL ACSHAGL +E + F+ M Y + +H
Sbjct: 262 GDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDH 321
Query: 430 YACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
Y+C+VD+L R R +EA K+I+ MP +P WG+LLG+CR + ELAE A+ L +E
Sbjct: 322 YSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGEIELAEIAARELLMVE 381
Query: 490 PWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSW 532
P N NYVLL IY + + +R M + ++ PG SW
Sbjct: 382 PENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 118/276 (42%), Gaps = 42/276 (15%)
Query: 58 IQSLCRGGNHKQALEVLWSERNP-----SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+ S GNH+QAL + + + ++SCA G VH + V S
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+P++ L++MY + S+ ARK+FDE +R +WNA G+ +E +ELY
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVY------------------------------- 201
M+ + + ++ ++K V +E Y
Sbjct: 139 AMD---VMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAI 195
Query: 202 -PLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI 260
+ KEIH+ R+ E + + + L++ Y + G I Y VF +M ++ V+WS++I
Sbjct: 196 GAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLI 255
Query: 261 GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 296
YA + AL+ F +M E P+ + ++V
Sbjct: 256 SAYALHGDAESALKTFQEM--ELAKVTPDDIAFLNV 289
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
P+ T+ L+ +C+ +F +++H Y + ++ P L + L+ Y GS+ +
Sbjct: 179 KPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQL 238
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
VFD +R + W++ A A+ G E L+ +++M + + D + VLKAC +
Sbjct: 239 VFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGL 298
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV-SWS 257
+ L K + + +G + + L+DV ++ G A V +AMP K + +W
Sbjct: 299 ADEALVYFKRMQGD---YGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWG 355
Query: 258 AMIG 261
A++G
Sbjct: 356 ALLG 359
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 136/451 (30%), Positives = 226/451 (50%), Gaps = 26/451 (5%)
Query: 123 LINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSD 182
+I+ Y + G +D A ++FDE ER I WN+ +AL GR +E + L+ +M + S
Sbjct: 146 MIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSW 205
Query: 183 RFTYTYVLKACVVSE----FSVYPLQKGKEIHANILRHGYEEN---------IHVM---- 225
+ K V E F P + I N + GY +N VM
Sbjct: 206 TAMVDGLAKNGKVDEARRLFDCMP--ERNIISWNAMITGYAQNNRIDEADQLFQVMPERD 263
Query: 226 ----TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 281
T++ + + ++ A +F MP KN +SW+ MI Y +N +AL +F +M+
Sbjct: 264 FASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLR 323
Query: 282 EACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI 341
+ PN T VS+ +H I + V +AL+ MY + GE+
Sbjct: 324 DGSVK-PNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGEL 382
Query: 342 SIGERVFDK--VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
++FD V D++SWNS+I++Y ++G+GK+AI+++ M G PS ++++ +L
Sbjct: 383 IAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLF 442
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 459
ACSHAGLVE+G F+ ++ + EHY C+VDL GRA RL + I
Sbjct: 443 ACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSR 502
Query: 460 TVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 519
+ +G++L +C +H +A+ + E +AG YVL+++IYA + +R M
Sbjct: 503 SFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKM 562
Query: 520 GKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
++ L+K PGCSW++V K+ + FV ++ +P
Sbjct: 563 KEKGLKKQPGCSWVKVGKQNHLFVVGDKSHP 593
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 134/313 (42%), Gaps = 34/313 (10%)
Query: 123 LINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSD 182
LI ++G + ARK+FD ER + W +G E EL+ + + S
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDR-----VDSR 106
Query: 183 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 242
+ T+ + S Y K I + + E N+ T++D YA+ G I A
Sbjct: 107 KNVVTW------TAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKAL 160
Query: 243 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 302
+F MP +N VSW++M+ + +A+ LF +M S V ++
Sbjct: 161 ELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDE 220
Query: 303 XXXXXX----------XXXVHGFILRRGLD------SIMP-----VINALITMYGRCGEI 341
+ G+ +D +MP N +IT + R E+
Sbjct: 221 ARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREM 280
Query: 342 SIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCA 400
+ +FD++ +V+SW ++I+ Y N ++A+ +F M+ G V P+ +++++L A
Sbjct: 281 NKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSA 340
Query: 401 CSH-AGLVEEGKI 412
CS AGLVE +I
Sbjct: 341 CSDLAGLVEGQQI 353
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 108/239 (45%), Gaps = 50/239 (20%)
Query: 228 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 287
L+ K G I+ A +F +P ++ V+W+ +I Y K +A ELF ++ DS
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKLGDMREARELFDRV-----DSR 106
Query: 288 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 347
N VT A+++ Y R ++SI E +
Sbjct: 107 KNVVTWT-----------------------------------AMVSGYLRSKQLSIAEML 131
Query: 348 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLV 407
F ++ +VVSWN++I Y +G KA+++F+ M + + +S+ +++ A G +
Sbjct: 132 FQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRI 187
Query: 408 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLL 466
+E LFE M + + + MVD L + ++DEA +L + MP E W +++
Sbjct: 188 DEAMNLFERMPRRDVV-----SWTAMVDGLAKNGKVDEARRLFDCMP-ERNIISWNAMI 240
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 140/317 (44%), Gaps = 36/317 (11%)
Query: 158 LAMVGRGEELLELYRQMNWSGIPS-DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRH 216
L VG+ E +L+ G+P D T+T+V+ + + +++ +E+ R
Sbjct: 56 LCKVGKIAEARKLF-----DGLPERDVVTWTHVITGYI----KLGDMREARELFD---RV 103
Query: 217 GYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELF 276
+N+ T ++ Y + +S A +F+ MP +N VSW+ MI YA++ KALELF
Sbjct: 104 DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELF 163
Query: 277 HQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYG 336
+M N V+ S+ + + RR + S +++ L
Sbjct: 164 DEMPER------NIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVSWTAMVDGL----A 213
Query: 337 RCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFIT 396
+ G++ R+FD + +++SWN++I+ Y N +A Q+F+ M + + S+ T
Sbjct: 214 KNGKVDEARRLFDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNT 269
Query: 397 VLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAI----KLIED 452
++ + + LF+ M K I + M+ +EA+ K++ D
Sbjct: 270 MITGFIRNREMNKACGLFDRMPEKNVI-----SWTTMITGYVENKENEEALNVFSKMLRD 324
Query: 453 MPFEPGPTVWGSLLGSC 469
+P + S+L +C
Sbjct: 325 GSVKPNVGTYVSILSAC 341
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 105/225 (46%), Gaps = 16/225 (7%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T ++ +C+ + +G+ +H+ + S ++ + + L+NMY + G L ARK+
Sbjct: 329 PNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKM 388
Query: 140 FDETR--ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
FD +R + WN+ A G G+E +E+Y QM G TY +L AC +
Sbjct: 389 FDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAG 448
Query: 198 FSVYPLQKGKEIHANILRHGYEENIHVM----TTLLDVYAKFGCISYANSVFRAMPAKNS 253
++KG E +++R +E++ + T L+D+ + G + + A+ S
Sbjct: 449 L----VEKGMEFFKDLVR---DESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDARLS 501
Query: 254 VSWSAMI--GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 296
S+ I C N++ + A E+ +++ D V M ++
Sbjct: 502 RSFYGAILSACNVHNEVSI-AKEVVKKVLETGSDDAGTYVLMSNI 545
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 142/434 (32%), Positives = 227/434 (52%), Gaps = 55/434 (12%)
Query: 148 IYIWNAFFRALAMVGRGEELLE---LYRQM---------NWSGIPSDRFTYTYVLKACVV 195
++++N R ++ GE L LY Q+ N S P D FTY ++LKA
Sbjct: 77 LFLFNPLLRCYSL---GETPLHAYFLYDQLQRLHFLSDHNKSLPPFDSFTYLFLLKASSN 133
Query: 196 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 255
F L G L G+E +++V T L+ +Y G + A+ VF MP +N V+
Sbjct: 134 PRFPSLLLGIGLHGLTLKL--GFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVT 191
Query: 256 WSAMI-------------------------------GCYAKNDMPVKALELFHQMVLEAC 284
W+ MI YA+ D P +A+ LF +MV AC
Sbjct: 192 WNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMV--AC 249
Query: 285 DSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI-MPVINALITMYGRCGEIS 342
D+I PN +T++++ VH ++ +RG + V N+LI Y +CG I
Sbjct: 250 DAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQ 309
Query: 343 IGERVFDKVKN--PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
+ F ++ N ++VSW ++IS + +G GK+A+ +F++M G+ P+ ++ I+VL A
Sbjct: 310 SAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNA 369
Query: 401 CSHAGLVEEGKI-LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 459
CSH GL EE + F +M+++Y+I P ++HY C+VD+L R RL+EA K+ ++P E
Sbjct: 370 CSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKA 429
Query: 460 TVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLM 519
VW LLG+C ++ +AELAER + L ELE + G+YVL+++I+ + D + RK M
Sbjct: 430 VVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQM 489
Query: 520 GKRVLQKVPGCSWI 533
R + K+PG S +
Sbjct: 490 DVRGVAKLPGHSQV 503
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 216 bits (549), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 216/438 (49%), Gaps = 43/438 (9%)
Query: 149 YIWNAFFRALAM---VGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQK 205
++WN RA+ + + +Y +M + D T+ ++L S + L
Sbjct: 25 FLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLP----SFHNPLHLPL 80
Query: 206 GKEIHANILRHGYEENIHVMTTLLDVY-------------------------------AK 234
G+ HA IL G +++ V T+LL++Y AK
Sbjct: 81 GQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAK 140
Query: 235 FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI---PNSV 291
G I A +F MP +N +SWS +I Y +AL+LF +M L + PN
Sbjct: 141 AGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEF 200
Query: 292 TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV 351
TM +V VH +I + ++ + + ALI MY +CG + +RVF+ +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 352 -KNPDVVSWNSLISMYGNNGYGKKAIQIFENMI-HQGVSPSYISFITVLCACSHAGLVEE 409
DV +++++I G + Q+F M ++P+ ++F+ +L AC H GL+ E
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 410 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
GK F+ M+ ++ I P ++HY CMVDL GR+ + EA I MP EP +WGSLL
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGS 380
Query: 470 RIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPG 529
R+ + + E A L EL+P N+G YVLL+++YA+ W +VK +R M + + KVPG
Sbjct: 381 RMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPG 440
Query: 530 CSWIEVKKKIYSFVSSEE 547
CS++EV+ ++ FV +E
Sbjct: 441 CSYVEVEGVVHEFVVGDE 458
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/326 (28%), Positives = 146/326 (44%), Gaps = 46/326 (14%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSL----- 133
+P T L+ S G+ H ++ GLD+DP++ T L+NMY G L
Sbjct: 59 SPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQR 118
Query: 134 --------------------------DCARKVFDETRERTIYIWNAFFRALAMVGRGEEL 167
D ARK+FDE ER + W+ M G+ +E
Sbjct: 119 VFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEA 178
Query: 168 LELYRQM-----NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENI 222
L+L+R+M N + + + FT + VL AC + L++GK +HA I ++ E +I
Sbjct: 179 LDLFREMQLPKPNEAFVRPNEFTMSTVLSAC----GRLGALEQGKWVHAYIDKYHVEIDI 234
Query: 223 HVMTTLLDVYAKFGCISYANSVFRAMPAKNSV-SWSAMIGCYAKNDMPVKALELFHQMVL 281
+ T L+D+YAK G + A VF A+ +K V ++SAMI C A + + +LF +M
Sbjct: 235 VLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMT- 293
Query: 282 EACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR-GLDSIMPVINALITMYGRCG 339
D+I PNSVT V + ++ G+ + ++ +YGR G
Sbjct: 294 -TSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSG 352
Query: 340 EISIGERVFDKVK-NPDVVSWNSLIS 364
I E + PDV+ W SL+S
Sbjct: 353 LIKEAESFIASMPMEPDVLIWGSLLS 378
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 103/217 (47%), Gaps = 17/217 (7%)
Query: 57 LIQSLCRGGNHKQALEVLWSER---------NPSHKTIEVLIQSCAQKSSFSDGRDVHRY 107
LI G +K+AL++ + P+ T+ ++ +C + + G+ VH Y
Sbjct: 165 LINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAY 224
Query: 108 LVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET-RERTIYIWNAFFRALAMVGRGEE 166
+ ++ D L T LI+MY + GSL+ A++VF+ ++ + ++A LAM G +E
Sbjct: 225 IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDE 284
Query: 167 LLELYRQMNWS-GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRH-GYEENIHV 224
+L+ +M S I + T+ +L ACV + +GK ++ G +I
Sbjct: 285 CFQLFSEMTTSDNINPNSVTFVGILGACVHRGL----INEGKSYFKMMIEEFGITPSIQH 340
Query: 225 MTTLLDVYAKFGCISYANSVFRAMPAKNSV-SWSAMI 260
++D+Y + G I A S +MP + V W +++
Sbjct: 341 YGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLL 377
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 137/488 (28%), Positives = 243/488 (49%), Gaps = 12/488 (2%)
Query: 57 LIQSLCRGGNHKQALEV-LWSERNPSHK---TIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L++ C+ G K+ EV L E K T +I+ C+ +G+ +H +V SG
Sbjct: 184 LLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSG 243
Query: 113 LD-QDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
+ + ++A L++ Y G L + + F+ E+ + WN+ A G + L+L+
Sbjct: 244 WNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLF 303
Query: 172 RQMN-WSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE-ENIHVMTTLL 229
+M W PS R + L C + +Q GK+IH +L+ G++ ++HV + L+
Sbjct: 304 SKMQFWGKRPSIR-PFMSFLNFCSRNS----DIQSGKQIHCYVLKMGFDVSSLHVQSALI 358
Query: 230 DVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPN 289
D+Y K I + +++++P N ++++ + +E+F M+ E
Sbjct: 359 DMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEV 418
Query: 290 SVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFD 349
+++ V VH ++ G + + V +LI Y + G+ + +VFD
Sbjct: 419 TLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFD 478
Query: 350 KVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE 409
++ P++ S+I+ Y NG G +++ M + P ++ ++VL CSH+GLVEE
Sbjct: 479 ELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEE 538
Query: 410 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
G+++F+S+ SKY I PG + YACMVDLLGRA +++A +L+ + W SLL SC
Sbjct: 539 GELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSC 598
Query: 470 RIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPG 529
RIH N + RA+ +L LEP N Y+ ++ Y E + + +R++ R L + G
Sbjct: 599 RIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASRELMREIG 658
Query: 530 CSWIEVKK 537
S + VK
Sbjct: 659 YSSVVVKN 666
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 168/353 (47%), Gaps = 14/353 (3%)
Query: 57 LIQSLCRGGNHKQALEVLWSER-----NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
LI R G +A+E L++E S T ++ C+ + +G VH ++
Sbjct: 83 LISGNSRYGCSLRAIE-LYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISL 141
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
G + ++ + L+ +Y L +D A K+FDE +R + + N R G + L E+Y
Sbjct: 142 GFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVY 201
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE-ENIHVMTTLLD 230
+M G+ + TY Y+++ C VY +GK++H+ +++ G+ NI V L+D
Sbjct: 202 LRMELEGVAKNGLTYCYMIRGCSHDRL-VY---EGKQLHSLVVKSGWNISNIFVANVLVD 257
Query: 231 VYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
Y+ G +S + F A+P K+ +SW++++ A + +L+LF +M P+
Sbjct: 258 YYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWG--KRPSI 315
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD-SIMPVINALITMYGRCGEISIGERVFD 349
+S +H ++L+ G D S + V +ALI MYG+C I ++
Sbjct: 316 RPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQ 375
Query: 350 KVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
+ ++ NSL++ + G K I++F MI +G ++ TVL A S
Sbjct: 376 SLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALS 428
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 156/349 (44%), Gaps = 11/349 (3%)
Query: 111 SGLDQDP----YLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEE 166
S L+++P Y + I+ + G+L A + FDE R + +N + G
Sbjct: 36 SFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLR 95
Query: 167 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMT 226
+ELY +M G+ T+ VL C F ++G ++H ++ G+ N+ V +
Sbjct: 96 AIELYAEMVSCGLRESASTFPSVLSVCSDELFC----REGIQVHCRVISLGFGCNMFVRS 151
Query: 227 TLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS 286
L+ +YA + A +F M +N + ++ C+ + + E++ +M LE
Sbjct: 152 ALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEG--V 209
Query: 287 IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD-SIMPVINALITMYGRCGEISIGE 345
N +T + +H +++ G + S + V N L+ Y CG++S
Sbjct: 210 AKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSM 269
Query: 346 RVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 405
R F+ V DV+SWNS++S+ + G ++ +F M G PS F++ L CS
Sbjct: 270 RSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNS 329
Query: 406 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP 454
++ GK + +L + + ++D+ G+ N ++ + L + +P
Sbjct: 330 DIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLP 378
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 148/361 (40%), Gaps = 30/361 (8%)
Query: 183 RFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYAN 242
R T T C ++ F P + ++ L + ++ +D K G + A+
Sbjct: 11 RRTTTLAQHLCSLTPFIATP----RMDFSSFLEENPSDLVYTHNRRIDELIKSGNLLSAH 66
Query: 243 SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXX 302
F M ++ V+++ +I ++ ++A+EL+ +MV +C ++ T SV
Sbjct: 67 EAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMV--SCGLRESASTFPSVLSVCSD 124
Query: 303 XXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSL 362
VH ++ G M V +AL+ +Y + + ++FD++ + ++ N L
Sbjct: 125 ELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLL 184
Query: 363 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 422
+ + G K+ +++ M +GV+ + +++ ++ CSH LV EGK L ++
Sbjct: 185 LRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGW 244
Query: 423 IHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERAS 482
+ +VD L +++ +P E W S++ C
Sbjct: 245 NISNIFVANVLVDYYSACGDLSGSMRSFNAVP-EKDVISWNSIVSVC------------- 290
Query: 483 AMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSF 542
+ G+ + D++++ + W S+R M L S I+ K+I+ +
Sbjct: 291 --------ADYGSVLDSLDLFSKMQFWGKRPSIRPFMS--FLNFCSRNSDIQSGKQIHCY 340
Query: 543 V 543
V
Sbjct: 341 V 341
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 146/534 (27%), Positives = 240/534 (44%), Gaps = 72/534 (13%)
Query: 77 ERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCA 136
+ +P LI +C +S R VH ++ G+ +A +L++ L S D +
Sbjct: 24 QASPDESHFISLIHACKDTASL---RHVHAQILRRGV-LSSRVAAQLVSCSSLLKSPDYS 79
Query: 137 RKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVS 196
+F + ER ++ NA R L R E + + M G+ DR T+ +VLK+
Sbjct: 80 LSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKL 139
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA--------------- 241
F G+ +HA L++ + + V +L+D+YAK G + +A
Sbjct: 140 GFRWL----GRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKES 195
Query: 242 --------------------NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 281
++FR+MP +NS SWS +I Y + +A +LF M
Sbjct: 196 ILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE 255
Query: 282 EACDS-----------------------------IPNSVTMVSVXXXXXXXXXXXXXXXV 312
+ S PN T+ +V +
Sbjct: 256 KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI 315
Query: 313 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 372
HG+IL G+ + AL+ MY +CGE+ VF + + D++SW ++I + +G
Sbjct: 316 HGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRF 375
Query: 373 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 432
+AIQ F M++ G P + F+ VL AC ++ V+ G F+SM Y I P ++HY
Sbjct: 376 HQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVL 435
Query: 433 MVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWN 492
+VDLLGRA +L+EA +L+E+MP P T W +L +C+ H AE S L EL+P
Sbjct: 436 VVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPEL 495
Query: 493 AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSE 546
G+Y+ L +A DV+ R + KR+ ++ G S+IE+ ++ F + +
Sbjct: 496 CGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGD 549
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 101/208 (48%), Gaps = 8/208 (3%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI + G+++ A+ E+L P+ TI ++ +C++ + G +H Y++D+G
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNG 323
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ D + T L++MY + G LDCA VF + I W A + A+ GR + ++ +R
Sbjct: 324 IKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFR 383
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
QM +SG D + VL AC+ S L + L + E + ++D+
Sbjct: 384 QMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMR---LDYAIEPTLKHYVLVVDLL 440
Query: 233 AKFGCISYANSVFRAMPAK-NSVSWSAM 259
+ G ++ A+ + MP + +W+A+
Sbjct: 441 GRAGKLNEAHELVENMPINPDLTTWAAL 468
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 151/335 (45%), Gaps = 20/335 (5%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVH--RYLVDSGLD 114
L+ + G K A +V E +P E ++ + + +D+H L S +
Sbjct: 167 LVDMYAKTGQLKHAFQVF--EESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPE 224
Query: 115 QDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM 174
++ + LI Y + G L+ A+++F+ E+ + W + G E + Y +M
Sbjct: 225 RNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEM 284
Query: 175 NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK 234
G+ + +T VL AC S L G IH IL +G + + + T L+D+YAK
Sbjct: 285 LEKGLKPNEYTIAAVLSACSKSG----ALGSGIRIHGYILDNGIKLDRAIGTALVDMYAK 340
Query: 235 FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMV 294
G + A +VF M K+ +SW+AMI +A + +A++ F QM+ P+ V +
Sbjct: 341 CGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSG--EKPDEVVFL 398
Query: 295 SVXXXXXXXXXXXXXXXVHGFILRRGLD-SIMPVIN---ALITMYGRCGEISIGERVFDK 350
+V F LD +I P + ++ + GR G+++ + +
Sbjct: 399 AVLTACLNSSEVDLGL---NFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVEN 455
Query: 351 VK-NPDVVSWNSLI-SMYGNNGYGKKAIQIFENMI 383
+ NPD+ +W +L + + GY ++A + +N++
Sbjct: 456 MPINPDLTTWAALYRACKAHKGY-RRAESVSQNLL 489
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 214 bits (544), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 171/319 (53%), Gaps = 4/319 (1%)
Query: 228 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 287
+++ K G A V R +N ++W+ MIG Y +N +AL+ M L D
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNM-LSFTDIK 162
Query: 288 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 347
PN + S VH ++ G++ + +AL+ +Y +CG+I V
Sbjct: 163 PNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREV 222
Query: 348 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLV 407
F VK DV WN++I+ + +G +AI++F M + VSP I+F+ +L CSH GL+
Sbjct: 223 FYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLL 282
Query: 408 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
EEGK F M ++ I P +EHY MVDLLGRA R+ EA +LIE MP EP +W SLL
Sbjct: 283 EEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS 342
Query: 468 SCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKV 527
S R + N EL E A + L +G+YVLL++IY+ K W + VR+LM K ++K
Sbjct: 343 SSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKA 399
Query: 528 PGCSWIEVKKKIYSFVSSE 546
G SW+E I+ F + +
Sbjct: 400 KGKSWLEFGGMIHRFKAGD 418
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 121/263 (46%), Gaps = 16/263 (6%)
Query: 123 LINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM-NWSGIPS 181
+I ++G A+KV ++ + WN + EE L+ + M +++ I
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKP 163
Query: 182 DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA 241
++F++ L AC + L K +H+ ++ G E N + + L+DVYAK G I +
Sbjct: 164 NKFSFASSLAACA----RLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTS 219
Query: 242 NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXX 301
VF ++ + W+AMI +A + + +A+ +F +M EA P+S+T + +
Sbjct: 220 REVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEM--EAEHVSPDSITFLGLLTTCS 277
Query: 302 XXXXXXXXXXVHGFILRRGLDSIMPVI---NALITMYGRCGEISIGERVFDKVK-NPDVV 357
G + RR SI P + A++ + GR G + + + + PDVV
Sbjct: 278 HCGLLEEGKEYFGLMSRRF--SIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVV 335
Query: 358 SWNSLIS---MYGNNGYGKKAIQ 377
W SL+S Y N G+ AIQ
Sbjct: 336 IWRSLLSSSRTYKNPELGEIAIQ 358
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/268 (19%), Positives = 116/268 (43%), Gaps = 31/268 (11%)
Query: 20 CYTSHVSSRLPVCFVSINP--------------------SANPVKDIKSXXXXXXXQLIQ 59
C S+++ RL + F+S++P + +++ +I
Sbjct: 78 CNRSYLARRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIG 137
Query: 60 SLCRGGNHKQALEVL-----WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLD 114
R +++AL+ L +++ P+ + + +CA+ + VH ++DSG++
Sbjct: 138 GYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIE 197
Query: 115 QDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM 174
+ L++ L+++Y + G + +R+VF + + IWNA A G E + ++ +M
Sbjct: 198 LNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEM 257
Query: 175 NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRH-GYEENIHVMTTLLDVYA 233
+ D T+ +L C L++GKE + R + + ++D+
Sbjct: 258 EAEHVSPDSITFLGLLTTCSHCGL----LEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLG 313
Query: 234 KFGCISYANSVFRAMPAK-NSVSWSAMI 260
+ G + A + +MP + + V W +++
Sbjct: 314 RAGRVKEAYELIESMPIEPDVVIWRSLL 341
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 208/440 (47%), Gaps = 39/440 (8%)
Query: 141 DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSV 200
+++ T W + L GR E + + M +G+ + T+ +L C +F+
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGC--GDFTS 86
Query: 201 YPLQKGKEIHANILRHGYEENIHVM---------------------------------TT 227
G +H + G + N HVM T
Sbjct: 87 GSEALGDLLHGYACKLGLDRN-HVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNT 145
Query: 228 LLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 287
++D Y + G + A +F MP ++ +SW+AMI + K +AL F +M +
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK-- 203
Query: 288 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 347
P+ V +++ VH ++L + + + V N+LI +Y RCG + +V
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 348 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLV 407
F ++ VVSWNS+I + NG +++ F M +G P ++F L ACSH GLV
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 408 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
EEG F+ M YRI P +EHY C+VDL RA RL++A+KL++ MP +P V GSLL
Sbjct: 324 EEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLA 383
Query: 468 SCRIHC-NAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQK 526
+C H N LAER L +L + NYV+L+++YA W +R+ M L+K
Sbjct: 384 ACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKK 443
Query: 527 VPGCSWIEVKKKIYSFVSSE 546
PG S IE+ ++ F++ +
Sbjct: 444 QPGFSSIEIDDCMHVFMAGD 463
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 145/365 (39%), Gaps = 83/365 (22%)
Query: 80 PSHKTIEVLIQSCAQKSSFSD--GRDVHRYLVDSGLDQDPYL-ATKLINMYHELG----- 131
P+H T L+ C +S S+ G +H Y GLD++ + T +I MY + G
Sbjct: 69 PNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKA 128
Query: 132 --------------------------SLDCARKVFDETRERTIYIWNAFFRALAMVGRGE 165
+D A K+FD+ ER + W A G E
Sbjct: 129 RLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQE 188
Query: 166 ELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVM 225
E L +R+M SG+ D L AC ++ L G +H +L ++ N+ V
Sbjct: 189 EALLWFREMQISGVKPDYVAIIAALNACT----NLGALSFGLWVHRYVLSQDFKNNVRVS 244
Query: 226 TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 285
+L+D+Y + GC+ +A VF M + VSW+++I +A N ++L F +M +
Sbjct: 245 NSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFK 304
Query: 286 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGE 345
P++VT +T G + G
Sbjct: 305 --PDAVTFTGA-----------------------------------LTACSHVGLVEEGL 327
Query: 346 RVFDKVK-----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
R F +K +P + + L+ +Y G + A+++ ++M + P+ + ++L A
Sbjct: 328 RYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSM---PMKPNEVVIGSLLAA 384
Query: 401 CSHAG 405
CS+ G
Sbjct: 385 CSNHG 389
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 11/201 (5%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + G ++AL E+ S P + I + +C + S G VHRY++
Sbjct: 177 MINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQD 236
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ ++ LI++Y G ++ AR+VF +RT+ WN+ A G E L +R
Sbjct: 237 FKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFR 296
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE--ENIHVMTTLLD 230
+M G D T+T L AC V +++G + I++ Y I L+D
Sbjct: 297 KMQEKGFKPDAVTFTGALTACS----HVGLVEEGLR-YFQIMKCDYRISPRIEHYGCLVD 351
Query: 231 VYAKFGCISYANSVFRAMPAK 251
+Y++ G + A + ++MP K
Sbjct: 352 LYSRAGRLEDALKLVQSMPMK 372
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 130/423 (30%), Positives = 213/423 (50%), Gaps = 38/423 (8%)
Query: 143 TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYP 202
+R +T ++N R+ G + L L+ M S + + T+ ++KA S FSV
Sbjct: 46 SRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKA-ACSSFSV-- 102
Query: 203 LQKGKEIHANILRHGYEENIHVMTT-------------------------------LLDV 231
G +H L+ G+ + V T+ LLD
Sbjct: 103 -SYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDA 161
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL-EACDSIPNS 290
+ G + YA F+ MP + VSW+ +I ++K + KAL +F +M+ E PN
Sbjct: 162 CGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNE 221
Query: 291 VTMVSVXXXXXXXXX--XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
T VSV +HG+++ + + + AL+ MYG+ G++ + +F
Sbjct: 222 ATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIF 281
Query: 349 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
D++++ V +WN++IS +NG K+A+++FE M V P+ I+ + +L AC+ + LV+
Sbjct: 282 DQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVD 341
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
G LF S+ S+Y+I P EHY C+VDL+GRA L +A I+ +PFEP +V G+LLG+
Sbjct: 342 LGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGALLGA 401
Query: 469 CRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 528
C+IH N EL L L+P + G YV L+ A WS+ + +RK M + ++K+P
Sbjct: 402 CKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRKIP 461
Query: 529 GCS 531
S
Sbjct: 462 AYS 464
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 42/278 (15%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI+S G +K +L +L S P++ T LI++ S S G +H + G
Sbjct: 57 LIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRG 116
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
DP++ T + Y E+G L+ +RK+FD+ + N+ A G + E ++
Sbjct: 117 FLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQ 176
Query: 173 QM------NWSG----------------------------IPSDRFTYTYVLKACVVSEF 198
+M +W+ I + T+ VL +C + F
Sbjct: 177 RMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSC--ANF 234
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
++ GK+IH ++ + T LLD+Y K G + A ++F + K +W+A
Sbjct: 235 DQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNA 294
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 296
+I A N P +ALE+F M ++ PN +T++++
Sbjct: 295 IISALASNGRPKQALEMFEMM--KSSYVHPNGITLLAI 330
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 42 PVKDIKSXXXXXXXQLIQSLCRGGNHKQAL----EVLWSER---NPSHKTIEVLIQSCAQ 94
PV D+ S +I + G H +AL E++ +ER P+ T ++ SCA
Sbjct: 179 PVTDVVSWTT-----VINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 95 --KSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWN 152
+ G+ +H Y++ + L T L++MY + G L+ A +FD+ R++ + WN
Sbjct: 234 FDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWN 293
Query: 153 AFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
A ALA GR ++ LE++ M S + + T +L AC S+
Sbjct: 294 AIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKL 339
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 232/482 (48%), Gaps = 26/482 (5%)
Query: 63 RGGNHKQALEVLW----SERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPY 118
R GN L + + + S T ++ +C+ S GR VH ++ G +
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 119 LATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG 178
T LI+MY + G L + +VF+ E+ + WNA G+G+E L ++ M
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 179 IPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCI 238
+ FT + V+K C S+ LQ+GK++HA ++ G + + + T ++ Y+ G I
Sbjct: 181 VEISEFTLSSVVKTCA----SLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLI 235
Query: 239 SYANSVFRAMPA-KNSVSWSAMI-GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 296
+ A V+ ++ + V +++I GC + L + Q PN + S
Sbjct: 236 NEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQR--------PNVRVLSSS 287
Query: 297 XXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDV 356
+H LR G S + N L+ MYG+CG+I +F + + V
Sbjct: 288 LAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSV 347
Query: 357 VSWNSLISMYGNNGYGKKAIQIFENMIHQG--VSPSYISFITVLCACSHAGLVEEGKILF 414
VSW S+I Y NG G KA++IF M +G V P+ ++F+ V+ AC+HAGLV+EGK F
Sbjct: 348 VSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECF 407
Query: 415 ESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT----VWGSLLGSCR 470
M KYR+ PG EHY C +D+L +A +E +L+E M + +W ++L +C
Sbjct: 408 GMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACS 467
Query: 471 IHCNAELAER-ASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPG 529
++ + E A ++ E P NA YVL+++ YA W V+ +R + + L K G
Sbjct: 468 LNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAG 527
Query: 530 CS 531
S
Sbjct: 528 HS 529
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 123/246 (50%), Gaps = 17/246 (6%)
Query: 57 LIQSLCRGGNHKQALEV---LWSER-NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L+ R G K+AL V ++ ER S T+ ++++CA G+ VH +V +G
Sbjct: 156 LLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTG 215
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRG--EELLEL 170
D L T +I+ Y +G ++ A KV++ T + + + R E L +
Sbjct: 216 RDL-VVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLM 274
Query: 171 YRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLD 230
RQ P+ R VL + + L GK+IH LR+G+ + + L+D
Sbjct: 275 SRQR-----PNVR-----VLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMD 324
Query: 231 VYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
+Y K G I A ++FRA+P+K+ VSW++MI YA N VKALE+F +M E +PNS
Sbjct: 325 MYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNS 384
Query: 291 VTMVSV 296
VT + V
Sbjct: 385 VTFLVV 390
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 113/230 (49%), Gaps = 8/230 (3%)
Query: 136 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 195
A +FDE +R + N+ + G + L L+ Q++ + T+T VL AC +
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 196 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 255
YP + G+++HA +++ G E T L+D+Y+K+G + + VF ++ K+ VS
Sbjct: 97 LS---YP-ETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVS 152
Query: 256 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 315
W+A++ + +N +AL +F M E + + T+ SV VH
Sbjct: 153 WNALLSGFLRNGKGKEALGVFAAMYRERVE--ISEFTLSSVVKTCASLKILQQGKQVHAM 210
Query: 316 ILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK-NPDVVSWNSLIS 364
++ G D ++ + A+I+ Y G I+ +V++ + + D V NSLIS
Sbjct: 211 VVVTGRD-LVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLIS 259
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 212 bits (539), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 157/563 (27%), Positives = 259/563 (46%), Gaps = 80/563 (14%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHKTI--EVLIQSCAQKSSFSDGRDVHRYLVDSGLD 114
L+ L R G+ ++A +V + PS + +I+ + +DG + + L +
Sbjct: 175 LVTGLIRNGDMEKAKQVF--DAMPSRDVVSWNAMIKGYIE----NDGMEEAKLLFGDMSE 228
Query: 115 QDPYLATKLINMYHELGSLDCARKVFDETRERTI---------YIWNAFFRALAMV---- 161
++ T ++ Y G + A ++F E ER I + WN +R M+
Sbjct: 229 KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEM 288
Query: 162 ----------------------GRGEELLELYRQMN-------WSGIPSD-----RFTYT 187
G G E L Q++ W + D +
Sbjct: 289 KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHM 348
Query: 188 YVLKACVVSEFSV----YPLQKGKEIHANILRHGYEENIHVM-------------TTLLD 230
Y + S S+ + LQ I L++G E + T+++D
Sbjct: 349 YASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMID 408
Query: 231 VYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
Y + G +S A +F+ + K+ V+W+ MI +N++ +A L MV C P +
Sbjct: 409 GYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMV--RCGLKPLN 466
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRG--LDSIMPVINALITMYGRCGEISIGERVF 348
T + +H I + D + + N+L++MY +CG I +F
Sbjct: 467 STYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIF 526
Query: 349 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
K+ D VSWNS+I ++G KA+ +F+ M+ G P+ ++F+ VL ACSH+GL+
Sbjct: 527 AKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLIT 586
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
G LF++M Y I PG++HY M+DLLGRA +L EA + I +PF P TV+G+LLG
Sbjct: 587 RGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGL 646
Query: 469 CRIHC---NAE-LAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVL 524
C ++ +AE +AERA+ L EL+P NA +V L ++YA K +RK MG + +
Sbjct: 647 CGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGV 706
Query: 525 QKVPGCSWIEVKKKIYSFVSSEE 547
+K PGCSW+ V + F+S ++
Sbjct: 707 KKTPGCSWVVVNGRANVFLSGDK 729
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 162/357 (45%), Gaps = 36/357 (10%)
Query: 131 GSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPS-DRFTYTYV 189
G + A ++FDE ER + WN L G E+ +++ M PS D ++ +
Sbjct: 152 GRSEDAVELFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAM-----PSRDVVSWNAM 206
Query: 190 LKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP 249
+K + ++ +++ K + ++ E+N+ T+++ Y ++G + A +F MP
Sbjct: 207 IKGYIEND----GMEEAKLLFGDM----SEKNVVTWTSMVYGYCRYGDVREAYRLFCEMP 258
Query: 250 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX--XXXXXXXX 307
+N VSW+AMI +A N++ +AL LF +M + PN T++S+
Sbjct: 259 ERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRR 318
Query: 308 XXXXVHGFILRRGLDSI---MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 364
+H ++ G +++ + +L+ MY G I+ + + + ++ D+ S N +I+
Sbjct: 319 LGEQLHAQVISNGWETVDHDGRLAKSLVHMYASSGLIASAQSLLN--ESFDLQSCNIIIN 376
Query: 365 MYGNNGYGKKAIQIFENM--IHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 422
Y NG ++A +FE + +H V S+ +++ AG V LF+ + K
Sbjct: 377 RYLKNGDLERAETLFERVKSLHDKV-----SWTSMIDGYLEAGDVSRAFGLFQKLHDKDG 431
Query: 423 IHPGMEHYACMVDLLGRANRLDEAIKLIEDM---PFEPGPTVWGSLLGSCRIHCNAE 476
+ + M+ L + EA L+ DM +P + + LL S N +
Sbjct: 432 V-----TWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLD 483
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 20/220 (9%)
Query: 203 LQKGKEIHA-----NILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
L +G +HA I + G + T+LL YAK G + A +F MP +N V+ +
Sbjct: 53 LSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCN 112
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
AM+ Y K +A LF +M N V+ + + +
Sbjct: 113 AMLTGYVKCRRMNEAWTLFREMP-------KNVVSWTVMLTALCDDGRSEDAVELFDEMP 165
Query: 318 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
R + S N L+T R G++ ++VFD + + DVVSWN++I Y N ++A
Sbjct: 166 ERNVVS----WNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKL 221
Query: 378 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM 417
+F +M + V +++ +++ G V E LF M
Sbjct: 222 LFGDMSEKNV----VTWTSMVYGYCRYGDVREAYRLFCEM 257
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 132/496 (26%), Positives = 241/496 (48%), Gaps = 13/496 (2%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
++ R K+A+ R+ P++ T ++ C+ S G+ +H + G
Sbjct: 296 VVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVG 355
Query: 113 LDQDPYLATKLINMYHELGSLDC-ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
+ + L++MY + + + A +VF + W L G ++ L
Sbjct: 356 FEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLL 415
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
+M + + T + VL+AC + +++ EIHA +LR + + V +L+D
Sbjct: 416 MEMVKREVEPNVVTLSGVLRACS----KLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDA 471
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP-NS 290
YA + YA +V R+M ++++++++++ + + AL + + M D I +
Sbjct: 472 YASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMY---GDGIRMDQ 528
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK 350
+++ +H + ++ G V+N+L+ MY +CG + ++VF++
Sbjct: 529 LSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEE 588
Query: 351 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
+ PDVVSWN L+S +NG+ A+ FE M + P ++F+ +L ACS+ L + G
Sbjct: 589 IATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLG 648
Query: 411 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCR 470
F+ M Y I P +EHY +V +LGRA RL+EA ++E M +P ++ +LL +CR
Sbjct: 649 LEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACR 708
Query: 471 IHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGC 530
N L E + L P + Y+LLAD+Y E+ + R LM ++ L K G
Sbjct: 709 YRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLGK 768
Query: 531 SWIEVKKKIYSFVSSE 546
S +EV+ K++SFVS +
Sbjct: 769 STVEVQGKVHSFVSED 784
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 158/332 (47%), Gaps = 8/332 (2%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG 131
E++ S +P+ T +++SCA S G VH ++ +G + + + + L ++Y + G
Sbjct: 114 EMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCG 173
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
A ++F + W +L + E L+ Y +M +G+P + FT+ +L
Sbjct: 174 QFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLG 233
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 251
A S L+ GK IH+NI+ G N+ + T+L+D Y++F + A V + +
Sbjct: 234 AS-----SFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQ 288
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
+ W++++ + +N +A+ F +M + PN+ T ++
Sbjct: 289 DVFLWTSVVSGFVRNLRAKEAVGTFLEM--RSLGLQPNNFTYSAILSLCSAVRSLDFGKQ 346
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISI-GERVFDKVKNPDVVSWNSLISMYGNNG 370
+H ++ G + V NAL+ MY +C + RVF + +P+VVSW +LI ++G
Sbjct: 347 IHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHG 406
Query: 371 YGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
+ + + M+ + V P+ ++ VL ACS
Sbjct: 407 FVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 152/330 (46%), Gaps = 13/330 (3%)
Query: 88 LIQSCAQKSSFSD------GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFD 141
L +SC + SF + G +H ++ GL ++ L L+++Y + + ARK+FD
Sbjct: 23 LQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFD 82
Query: 142 ETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVY 201
E RT++ W A L L+ +M SG + FT++ V+++C +
Sbjct: 83 EMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCA----GLR 138
Query: 202 PLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 261
+ G +H ++++ G+E N V ++L D+Y+K G A +F ++ +++SW+ MI
Sbjct: 139 DISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMIS 198
Query: 262 CYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL 321
+AL+ + +MV PN T V + +H I+ RG+
Sbjct: 199 SLVGARKWREALQFYSEMVKAGVP--PNEFTFVKL-LGASSFLGLEFGKTIHSNIIVRGI 255
Query: 322 DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFEN 381
+ + +L+ Y + ++ RV + DV W S++S + N K+A+ F
Sbjct: 256 PLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLE 315
Query: 382 MIHQGVSPSYISFITVLCACSHAGLVEEGK 411
M G+ P+ ++ +L CS ++ GK
Sbjct: 316 MRSLGLQPNNFTYSAILSLCSAVRSLDFGK 345
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 4/245 (1%)
Query: 206 GKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAK 265
G IH +++ G EN+ + LL +Y K I A +F M + +W+ MI + K
Sbjct: 42 GLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTK 101
Query: 266 NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIM 325
+ AL LF +M+ A + PN T SV VHG +++ G +
Sbjct: 102 SQEFASALSLFEEMM--ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNS 159
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
V ++L +Y +CG+ +F ++N D +SW +IS ++A+Q + M+
Sbjct: 160 VVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKA 219
Query: 386 GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDE 445
GV P+ +F+ +L A S GL E GK + +++ + I + +VD + +++++
Sbjct: 220 GVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVR-GIPLNVVLKTSLVDFYSQFSKMED 277
Query: 446 AIKLI 450
A++++
Sbjct: 278 AVRVL 282
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 136/423 (32%), Positives = 215/423 (50%), Gaps = 13/423 (3%)
Query: 89 IQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTI 148
++SC+++ S G +H + SG L LI+ Y G + ARKVFDE +
Sbjct: 132 LKSCSRELCVSIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVD 191
Query: 149 YI-WNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
+ ++ V + L+L+R M S + + T L A +S+ L +
Sbjct: 192 AVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSA--ISDLG--DLSGAE 247
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKND 267
H ++ G + ++H++T L+ +Y K G IS A +F K+ V+W+ MI YAK
Sbjct: 248 SAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTG 307
Query: 268 MPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL--RRGLDSIM 325
+ + + L QM E PNS T V + V + R LD+I+
Sbjct: 308 LLEECVWLLRQMKYEKMK--PNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAIL 365
Query: 326 PVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ 385
AL+ MY + G + +F+++K+ DV SW ++IS YG +G ++A+ +F M +
Sbjct: 366 G--TALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEE 423
Query: 386 G--VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 443
V P+ I+F+ VL ACSH GLV EG F+ M+ Y P +EHY C+VDLLGRA +L
Sbjct: 424 NCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQL 483
Query: 444 DEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVLLADIY 503
+EA +LI ++P T W +LL +CR++ NA+L E L E+ + + +LLA +
Sbjct: 484 EEAYELIRNLPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTH 543
Query: 504 AEA 506
A A
Sbjct: 544 AVA 546
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 182/390 (46%), Gaps = 13/390 (3%)
Query: 104 VHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGR 163
+H Y+V +GLD+D + +KL+ + + + A +F+ ++++N R ++
Sbjct: 47 IHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMFNTMIRGYSISDE 105
Query: 164 GEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIH 223
E ++ Q+ G+ DRF++ LK+C E V G+ +H LR G+
Sbjct: 106 PERAFSVFNQLRAKGLTLDRFSFITTLKSC-SRELCV---SIGEGLHGIALRSGFMVFTD 161
Query: 224 VMTTLLDVYAKFGCISYANSVFRAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLE 282
+ L+ Y G IS A VF MP ++V++S ++ Y + AL+LF ++
Sbjct: 162 LRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLFR--IMR 219
Query: 283 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 342
+ + N T++S H ++ GLD + +I ALI MYG+ G IS
Sbjct: 220 KSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGIS 279
Query: 343 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
R+FD DVV+WN +I Y G ++ + + M ++ + P+ +F+ +L +C+
Sbjct: 280 SARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCA 339
Query: 403 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVW 462
++ G+ + + +L + RI +VD+ + L++A+++ M + W
Sbjct: 340 YSEAAFVGRTVAD-LLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMK-DKDVKSW 397
Query: 463 GSLLGSCRIHCNAELAERASAMLFELEPWN 492
+++ H LA A + ++E N
Sbjct: 398 TAMISGYGAH---GLAREAVTLFNKMEEEN 424
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/322 (25%), Positives = 143/322 (44%), Gaps = 45/322 (13%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T+ + + + S H + GLD D +L T LI MY + G + AR++FD
Sbjct: 229 TLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCA 288
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPL 203
+ + WN A G EE + L RQM + + + T+ +L +C SE +
Sbjct: 289 IRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFV-- 346
Query: 204 QKGKEIHANILRHGYEENIH----VMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
G+ + A++L EE I + T L+D+YAK G + A +F M K+ SW+AM
Sbjct: 347 --GRTV-ADLLE---EERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAM 400
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I Y + + +A+ LF++M E C PN +T + V HG ++
Sbjct: 401 ISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACS-----------HGGLVME 449
Query: 320 GLDSIMPVINA------------LITMYGRCGEISIGERVFDKVKN----PDVVSWNSLI 363
G+ ++ A ++ + GR G++ E ++ ++N D +W +L+
Sbjct: 450 GIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQL---EEAYELIRNLPITSDSTAWRALL 506
Query: 364 S---MYGNNGYGKKAIQIFENM 382
+ +YGN G+ + M
Sbjct: 507 AACRVYGNADLGESVMMRLAEM 528
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Query: 75 WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLD 134
+ + P+ T L+ SCA + GR V L + + D L T L++MY ++G L+
Sbjct: 321 YEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLE 380
Query: 135 CARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG--IPSDRFTYTYVLKA 192
A ++F+ +++ + W A G E + L+ +M + + T+ VL A
Sbjct: 381 KAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNA 440
Query: 193 CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP-AK 251
C + ++ K + + + + + ++D+ + G + A + R +P
Sbjct: 441 CSHGGLVMEGIRCFKRM---VEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITS 497
Query: 252 NSVSWSAMIG 261
+S +W A++
Sbjct: 498 DSTAWRALLA 507
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 145/536 (27%), Positives = 250/536 (46%), Gaps = 49/536 (9%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHK------TIEVLIQSCAQKSSFSDGRDVHRYLVD 110
++ SL + G +A ++ + E N T+ L+ SC S GR++H +
Sbjct: 255 VVSSLVKEGKSHKAFDLFY-EMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIR 313
Query: 111 SGL-------------------------------DQDPYLATKLINMYHELGSLDCARKV 139
GL QD T++I Y G +D A ++
Sbjct: 314 IGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEI 373
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC-VVSEF 198
F E+ +NA G G + L+L+ M G+ F+ T + AC +VSE
Sbjct: 374 FANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEK 433
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK--NSVSW 256
V ++IH ++ G N + T LLD+ + ++ A +F P+ +S +
Sbjct: 434 KV-----SEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKAT 488
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
+++IG YA+N +P KA+ LFH+ + E + V++ + +H +
Sbjct: 489 TSIIGGYARNGLPDKAVSLFHRTLCEQ-KLFLDEVSLTLILAVCGTLGFREMGYQIHCYA 547
Query: 317 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 376
L+ G S + + N+LI+MY +C + ++F+ ++ DV+SWNSLIS Y G +A+
Sbjct: 548 LKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEAL 607
Query: 377 QIFENMIHQGVSPSYISFITVLCAC--SHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 434
++ M + + P I+ V+ A + + + + LF SM + Y I P EHY V
Sbjct: 608 ALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFV 667
Query: 435 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAG 494
+LG L+EA I MP +P +V +LL SCRIH N +A+R + ++ +P
Sbjct: 668 RVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPS 727
Query: 495 NYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSFVSSEEDNP 550
Y+L ++IY+ + W + +R+ M +R +K P SWI + KI+SF + + +P
Sbjct: 728 EYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHP 783
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 193/467 (41%), Gaps = 71/467 (15%)
Query: 57 LIQSLCRGGNHKQALEVLWSER-----NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
LI R +AL+V + R P+ T ++ +C + S FS G +H +V S
Sbjct: 151 LISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKS 210
Query: 112 GLDQDPYLATKLINMYHELGSLDC--ARKVFDETRERTIYIWNAFFRALAMVGRGEELLE 169
G +++ L+++Y + C K+FDE +R + WN +L G+ + +
Sbjct: 211 GFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFD 270
Query: 170 LYRQMNW-SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
L+ +MN G D FT + +L +C S L +G+E+H +R G + + V L
Sbjct: 271 LFYEMNRVEGFGVDSFTLSTLLSSCTDSSV----LLRGRELHGRAIRIGLMQELSVNNAL 326
Query: 229 LDVYAK-------------------------------FGCISYANSVFRAMPAKNSVSWS 257
+ Y+K FG + A +F + KN+++++
Sbjct: 327 IGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYN 386
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
A++ + +N +KAL+LF M+ + S+T S +HGF +
Sbjct: 387 ALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLT--SAVDACGLVSEKKVSEQIHGFCI 444
Query: 318 RRGLDSIMPVI-NALITMYGRCGEISIGERVFDK-VKNPDVV-SWNSLISMYGNNGYGKK 374
+ G + P I AL+ M RC ++ E +FD+ N D + S+I Y NG K
Sbjct: 445 KFG-TAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDK 503
Query: 375 AIQIF-ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH--------- 424
A+ +F + Q + +S +L C G E G Y+IH
Sbjct: 504 AVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMG----------YQIHCYALKAGYF 553
Query: 425 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRI 471
+ ++ + + D+AIK+ M E W SL+ SC I
Sbjct: 554 SDISLGNSLISMYAKCCDSDDAIKIFNTMR-EHDVISWNSLI-SCYI 598
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 166/380 (43%), Gaps = 50/380 (13%)
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQ 173
++ L LI+ Y +LG A VF T+ + A + + E L+++ +
Sbjct: 111 EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFSRLNLEIEALKVFFR 170
Query: 174 MNWSG-IPSDRFTYTYVLKACV-VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
M +G + + +T+ +L ACV VS FS+ G +IH I++ G+ ++ V +L+ +
Sbjct: 171 MRKAGLVQPNEYTFVAILTACVRVSRFSL-----GIQIHGLIVKSGFLNSVFVSNSLMSL 225
Query: 232 YAKFGCISYAN--SVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPN 289
Y K S + +F +P ++ SW+ ++ K KA +LF++M + +
Sbjct: 226 YDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGV-D 284
Query: 290 SVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR------------ 337
S T+ ++ +HG +R GL + V NALI Y +
Sbjct: 285 SFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYE 344
Query: 338 -------------------CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
G + +F V + +++N+L++ + NG+G KA+++
Sbjct: 345 MMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKL 404
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC----MV 434
F +M+ +GV + S + + AC GLV E K+ + + I G C ++
Sbjct: 405 FTDMLQRGVELTDFSLTSAVDAC---GLVSEKKV--SEQIHGFCIKFGTAFNPCIQTALL 459
Query: 435 DLLGRANRLDEAIKLIEDMP 454
D+ R R+ +A ++ + P
Sbjct: 460 DMCTRCERMADAEEMFDQWP 479
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 207 bits (528), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/486 (27%), Positives = 240/486 (49%), Gaps = 15/486 (3%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I R G H AL E+ + + T +++SC +G +H +
Sbjct: 84 MISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGN 143
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ + + L+++Y G ++ AR FD +ER + WNA + L++
Sbjct: 144 CAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQ 203
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
M G D FT+ +L+A +V V L+ E+H ++ G+ + ++ +L++ Y
Sbjct: 204 LMLTEGKKPDCFTFGSLLRASIV----VKCLEIVSELHGLAIKLGFGRSSALIRSLVNAY 259
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMI-GCYAKNDMPVKALELFHQMVLEACDSIPNSV 291
K G ++ A + ++ +S +A+I G +N+ A ++F M+ + + V
Sbjct: 260 VKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI--RMKTKMDEV 317
Query: 292 TMVSVXXXXXXXXXXXXXXXVHGFILRRG-LDSIMPVINALITMYGRCGEISIGERVFDK 350
+ S+ +HGF L+ + + + N+LI MY + GEI F++
Sbjct: 318 VVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEE 377
Query: 351 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
+K DV SW SLI+ YG +G +KAI ++ M H+ + P+ ++F+++L ACSH G E G
Sbjct: 378 MKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELG 437
Query: 411 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI--EDMPFEPGPTVWGSLLGS 468
++++M++K+ I EH +C++D+L R+ L+EA LI ++ + WG+ L +
Sbjct: 438 WKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDA 497
Query: 469 CRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKR-VLQKV 527
CR H N +L++ A+ L +EP NY+ LA +YA W + + RKLM + K
Sbjct: 498 CRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKA 557
Query: 528 PGCSWI 533
PG S +
Sbjct: 558 PGYSLV 563
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 172/376 (45%), Gaps = 8/376 (2%)
Query: 104 VHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGR 163
+H + +G + L LI++Y + G + ARK+FD +R + W A + G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 164 GEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIH 223
+ L L+++M+ + +++FTY VLK+C + L++G +IH ++ + N+
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCK----DLGCLKEGMQIHGSVEKGNCAGNLI 149
Query: 224 VMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
V + LL +YA+ G + A F +M ++ VSW+AMI Y N + LF M+ E
Sbjct: 150 VRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEG 209
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
P+ T S+ +HG ++ G +I +L+ Y +CG ++
Sbjct: 210 --KKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGSLAN 267
Query: 344 GERVFDKVKNPDVVSWNSLISMYG-NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
++ + K D++S +LI+ + N A IF++MI + ++L C+
Sbjct: 268 AWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICT 327
Query: 403 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVW 462
V G+ + L +I + ++D+ ++ +++A+ E+M E W
Sbjct: 328 TIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMK-EKDVRSW 386
Query: 463 GSLLGSCRIHCNAELA 478
SL+ H N E A
Sbjct: 387 TSLIAGYGRHGNFEKA 402
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 198/405 (48%), Gaps = 45/405 (11%)
Query: 98 FSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRA 157
S GR +H L+ +G + L LI+ Y + G+L+ +R FD R++ I WNA
Sbjct: 332 LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG 391
Query: 158 LAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHG 217
A G L L+ QM G +T++ LK+C V+E +++H+ I+R G
Sbjct: 392 YAN-KDGPICLSLFLQMLQMGFRPTEYTFSTALKSCCVTEL--------QQLHSVIVRMG 442
Query: 218 YEENIHVMTTLLDVYAKFGCIS------------------------------YANSV--F 245
YE+N +V+++L+ YAK ++ Y SV
Sbjct: 443 YEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLI 502
Query: 246 RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 305
+ ++VSW+ I +++D + +ELF M+ + P+ T VS+
Sbjct: 503 STLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQS--NIRPDKYTFVSILSLCSKLCD 560
Query: 306 XXXXXXVHGFILRRGLD-SIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLIS 364
+HG I + + V N LI MYG+CG I +VF++ + ++++W +LIS
Sbjct: 561 LTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALIS 620
Query: 365 MYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIH 424
G +GYG++A++ F+ + G P +SFI++L AC H G+V+EG LF+ M Y +
Sbjct: 621 CLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVE 679
Query: 425 PGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
P M+HY C VDLL R L EA LI +MPF VW + L C
Sbjct: 680 PEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVWRTFLDGC 724
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 188/418 (44%), Gaps = 38/418 (9%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQ-DPYLATKLINMYHELGSLDCARK 138
P+ T+ L+ SCA G +H + GL D ++ T L+ +Y L L+ A +
Sbjct: 113 PNQSTVSGLL-SCASLD-VRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
VF++ +++ WN L G +E + +R++ G ++ VLK VS
Sbjct: 171 VFEDMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKG--VS-- 226
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
V L K++H + + G + I V+ +L+ Y K G A +F+ + + VSW+A
Sbjct: 227 CVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNA 286
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
+I AK++ P+KAL+LF M PN T VSV +HG +++
Sbjct: 287 IICATAKSENPLKALKLFVSMPEHGFS--PNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK 344
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
G ++ + + NALI Y +CG + FD +++ ++V WN+L+S Y N G + +
Sbjct: 345 NGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSL 403
Query: 379 FENMIHQGVSPSYISFITVLCACS-------HAGLV----EEGKILFESMLSKYRIHPGM 427
F M+ G P+ +F T L +C H+ +V E+ + S++ Y + M
Sbjct: 404 FLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLM 463
Query: 428 EHYACMVD----------------LLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSC 469
++D + R + E++KLI + +P W + +C
Sbjct: 464 NDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLE-QPDTVSWNIAIAAC 520
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 176/382 (46%), Gaps = 13/382 (3%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVD--SGLDQDPYLATKLINMYHELGSLDCARKVFDETRE 145
L+ C + SF+ + +H + S L Q Y+ +I++Y +LG + A KVFD+ E
Sbjct: 18 LLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMPE 77
Query: 146 RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQK 205
R +N + + G ++ ++ +M + G ++ T + +L + ++
Sbjct: 78 RNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD------VRA 131
Query: 206 GKEIHANILRHG-YEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYA 264
G ++H L++G + + V T LL +Y + + A VF MP K+ +W+ M+
Sbjct: 132 GTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLG 191
Query: 265 KNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSI 324
+ + F ++V +S + V +H ++GLD
Sbjct: 192 HRGFLKECMFFFRELVRMGASLTESS--FLGVLKGVSCVKDLDISKQLHCSATKKGLDCE 249
Query: 325 MPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH 384
+ V+N+LI+ YG+CG + ER+F + D+VSWN++I + KA+++F +M
Sbjct: 250 ISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPE 309
Query: 385 QGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLD 444
G SP+ ++++VL S L+ G+ + ML K G+ ++D + L+
Sbjct: 310 HGFSPNQGTYVSVLGVSSLVQLLSCGRQI-HGMLIKNGCETGIVLGNALIDFYAKCGNLE 368
Query: 445 EAIKLIEDMPFEPGPTVWGSLL 466
++ +L D + W +LL
Sbjct: 369 DS-RLCFDYIRDKNIVCWNALL 389
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/389 (30%), Positives = 195/389 (50%), Gaps = 43/389 (11%)
Query: 170 LYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLL 229
+ +M +P D T+ +V KAC + L K +H LR G ++ + TL+
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVK--TLHCQALRFGLLSDLFTLNTLI 159
Query: 230 DVYA-------------------------------KFGCISYANSVFRAMPAKNSVSWSA 258
VY+ K I A +F +MP ++ VSW++
Sbjct: 160 RVYSLIAPIDSALQLFDENPQRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNS 219
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
+I YA+ + +A++LF +MV A P++V +VS +H + R
Sbjct: 220 LISGYAQMNHCREAIKLFDEMV--ALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKR 277
Query: 319 RGL--DSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 376
+ L DS + L+ Y +CG I +F+ + + +WN++I+ +G G+ +
Sbjct: 278 KRLFIDSFLAT--GLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTV 335
Query: 377 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDL 436
F M+ G+ P ++FI+VL CSH+GLV+E + LF+ M S Y ++ M+HY CM DL
Sbjct: 336 DYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADL 395
Query: 437 LGRANRLDEAIKLIEDMPFEPGPT----VWGSLLGSCRIHCNAELAERASAMLFELEPWN 492
LGRA ++EA ++IE MP + G W LLG CRIH N E+AE+A+ + L P +
Sbjct: 396 LGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPED 455
Query: 493 AGNYVLLADIYAEAKMWSDVKSVRKLMGK 521
G Y ++ ++YA A+ W +V VR+++ +
Sbjct: 456 GGVYKVMVEMYANAERWEEVVKVREIIDR 484
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 91/189 (48%), Gaps = 12/189 (6%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P + I + +CAQ + G+ +H Y L D +LAT L++ Y + G +D A ++
Sbjct: 247 PDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEI 306
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
F+ ++T++ WNA LAM G GE ++ +R+M SGI D T+ VL C S
Sbjct: 307 FELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGL- 365
Query: 200 VYPLQKGKEIHANILRHGYEENIHV--MTTLLDVYAKFGCISYANSVFRAMPAKNS---- 253
+ + + + + +R Y+ N + + D+ + G I A + MP
Sbjct: 366 ---VDEARNLF-DQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK 421
Query: 254 -VSWSAMIG 261
++WS ++G
Sbjct: 422 LLAWSGLLG 430
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 6/161 (3%)
Query: 136 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 195
AR++FD R + WN+ A + E ++L+ +M G+ D L AC
Sbjct: 202 ARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQ 261
Query: 196 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 255
S QKGK IH R + + T L+D YAK G I A +F K +
Sbjct: 262 SG----DWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFT 317
Query: 256 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 296
W+AMI A + ++ F +MV P+ VT +SV
Sbjct: 318 WNAMITGLAMHGNGELTVDYFRKMVSSGIK--PDGVTFISV 356
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 222/457 (48%), Gaps = 29/457 (6%)
Query: 101 GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFF----- 155
G+ +H + G+ D + + LI+MY + G + ARKVFDE ER + WNA
Sbjct: 65 GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMS 124
Query: 156 --RALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE---------------F 198
A+ G EE+ + W + + KA + E
Sbjct: 125 NGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVML 184
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
VY + E E+N V + ++ Y + G + A ++F + A++ V W+
Sbjct: 185 GVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNT 244
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
+I YA+N A++ F M E + P++VT+ S+ VH I
Sbjct: 245 LIAGYAQNGYSDDAIDAFFNMQGEGYE--PDAVTVSSILSACAQSGRLDVGREVHSLINH 302
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQI 378
RG++ V NALI MY +CG++ VF+ + V NS+IS +G GK+A+++
Sbjct: 303 RGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEM 362
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
F M + P I+FI VL AC H G + EG +F M ++ + P ++H+ C++ LLG
Sbjct: 363 FSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLG 421
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFE----LEPWNAG 494
R+ +L EA +L+++M +P TV G+LLG+C++H + E+AE+ ++ ++
Sbjct: 422 RSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSEN 481
Query: 495 NYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCS 531
+ ++++YA + W +++R M KR L+K PG S
Sbjct: 482 HLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 124/288 (43%), Gaps = 34/288 (11%)
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 251
ACVV + GK +H+ ++ G ++ V ++L+ +Y K GC+ A VF MP +
Sbjct: 56 ACVVPRVVL-----GKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPER 110
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
N +W+AMIG Y N V A LF + + C + + M+
Sbjct: 111 NVATWNAMIGGYMSNGDAVLASGLFEE--ISVCRNTVTWIEMIKGYGKRIEIEKARELFE 168
Query: 312 VHGFILR---------------------RGLDSIMPVINALI-----TMYGRCGEISIGE 345
F L+ R +P NA + + Y R G++
Sbjct: 169 RMPFELKNVKAWSVMLGVYVNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEAR 228
Query: 346 RVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 405
+F +V D+V WN+LI+ Y NGY AI F NM +G P ++ ++L AC+ +G
Sbjct: 229 AIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSG 288
Query: 406 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
++ G+ + S+++ I ++D+ + L+ A + E +
Sbjct: 289 RLDVGREV-HSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESI 335
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI + G A++ ++ + P T+ ++ +CAQ GR+VH + G
Sbjct: 245 LIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG 304
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
++ + +++ LI+MY + G L+ A VF+ R++ N+ LA+ G+G+E LE++
Sbjct: 305 IELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFS 364
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
M + D T+ VL ACV F L +G +I + + + N+ L+ +
Sbjct: 365 TMESLDLKPDEITFIAVLTACVHGGF----LMEGLKIFSEMKTQDVKPNVKHFGCLIHLL 420
Query: 233 AKFGCISYANSVFRAMPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
+ G + A + + M K N A++G K M + E + ++E SI NS
Sbjct: 421 GRSGKLKEAYRLVKEMHVKPNDTVLGALLGA-CKVHMDTEMAEQVMK-IIETAGSITNS 477
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/461 (28%), Positives = 220/461 (47%), Gaps = 35/461 (7%)
Query: 81 SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCA---R 137
S T+ ++ SC S G+ VH +L +LG L A
Sbjct: 496 SLSTVLAILTSCDSSDSLIFGKSVHCWL-------------------QKLGDLTSAFLRL 536
Query: 138 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSG-IPSDRFTYTYVLKACVVS 196
+ ETR+ T WN+ A G E L ++ M+ G I D T L + +
Sbjct: 537 ETMSETRDLTS--WNSVISGCASSGHHLESLRAFQAMSREGKIRHDLIT----LLGTISA 590
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSW 256
++ + +G+ H ++ E + + TL+ +Y + I A VF + N SW
Sbjct: 591 SGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSW 650
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
+ +I ++N + +LF + LE PN +T V + H +
Sbjct: 651 NCVISALSQNKAGREVFQLFRNLKLE-----PNEITFVGLLSASTQLGSTSYGMQAHCHL 705
Query: 317 LRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 376
+RRG + V AL+ MY CG + G +VF + +WNS+IS +G +G G+KA+
Sbjct: 706 IRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAM 765
Query: 377 QIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVD 435
++F+ + + P+ SFI++L ACSH+G ++EG ++ M K+ + P EH +VD
Sbjct: 766 ELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVD 825
Query: 436 LLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGN 495
+LGRA +L EA + I + VWG+LL +C H + +L + + +LFE+EP NA
Sbjct: 826 MLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASY 885
Query: 496 YVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVK 536
Y+ LA+ Y W + +RK++ L+K+PG S I+V+
Sbjct: 886 YISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVR 926
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 178/373 (47%), Gaps = 34/373 (9%)
Query: 104 VHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGR 163
+H +++GL D L L+N+Y + +L A VF R I WN G
Sbjct: 210 LHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGH 269
Query: 164 GEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY--EEN 221
+ L+ ++ M SG +D T++ V+ AC S+ L G+ +H +++ GY E +
Sbjct: 270 PRKSLQYFKSMTGSGQEADTVTFSCVISACS----SIEELTLGESLHGLVIKSGYSPEAH 325
Query: 222 IHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 281
+ V +++ +Y+K G A +VF + ++ +S +A++ +A N M +A + +QM
Sbjct: 326 VSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQM-- 383
Query: 282 EACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS-IMPVINALITMYGRCG 339
++ D I P+ T+VS+ VHG+ +R + S + VIN++I MYG+CG
Sbjct: 384 QSVDKIQPDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCG 443
Query: 340 EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
+ E +F + D+VSWNS+IS + NG+ KA +F+ ++ + S S S TVL
Sbjct: 444 LTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE-YSCSKFSLSTVLA 502
Query: 400 ---ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE 456
+C + +S++ +H C + LG L A +E M
Sbjct: 503 ILTSCDSS----------DSLIFGKSVH-------CWLQKLG---DLTSAFLRLETMSET 542
Query: 457 PGPTVWGSLLGSC 469
T W S++ C
Sbjct: 543 RDLTSWNSVISGC 555
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 157/348 (45%), Gaps = 9/348 (2%)
Query: 102 RDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMV 161
R VH + + GL QD ++KL+ Y G L + +FDE +E+ + +WN+ AL
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 162 GRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEEN 221
GR + L+ +M G D T + S++ +K +H + G +
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLA----ASALSSLHLSRKCSMLHCLAIETGLVGD 222
Query: 222 IHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVL 281
+ L+++YAK +S A VF M ++ VSW+ ++ N P K+L+ F M
Sbjct: 223 SSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTG 282
Query: 282 EACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGL--DSIMPVINALITMYGRCG 339
++ ++VT V +HG +++ G ++ + V N++I+MY +CG
Sbjct: 283 SGQEA--DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCG 340
Query: 340 EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIH-QGVSPSYISFITVL 398
+ E VF+++ DV+S N++++ + NG ++A I M + P + +++
Sbjct: 341 DTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 399 CACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 446
C EG+ + + +E ++D+ G+ +A
Sbjct: 401 SICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA 448
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 175/413 (42%), Gaps = 36/413 (8%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPY-LATKLINMYHELGSLDCARK 138
P T+ + C S +GR VH Y V + + +I+MY + G A
Sbjct: 391 PDIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAEL 450
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF 198
+F T R + WN+ A + G + L++++ S +F+ + VL A + S
Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEV-VSEYSCSKFSLSTVL-AILTSCD 508
Query: 199 SVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSA 258
S L GK +H + + G L + + +S ++ SW++
Sbjct: 509 SSDSLIFGKSVHCWLQKLG---------DLTSAFLRLETMS---------ETRDLTSWNS 550
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
+I A + +++L F M E + +T++ HG ++
Sbjct: 551 VISGCASSGHHLESLRAFQAMSREG-KIRHDLITLLGTISASGNLGLVLQGRCFHGLAIK 609
Query: 319 --RGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAI 376
R LD+ + N LITMYGRC +I +VF + +P++ SWN +IS N G++
Sbjct: 610 SLRELDTQLQ--NTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVISALSQNKAGREVF 667
Query: 377 QIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSK-YRIHPGMEHYACMVD 435
Q+F N+ + P+ I+F+ +L A + G G ++ + ++ +P + A +VD
Sbjct: 668 QLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVD 722
Query: 436 LLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFEL 488
+ L+ +K+ + + W S++ + H + E+A + EL
Sbjct: 723 MYSSCGMLETGMKVFRNSGVNS-ISAWNSVISAHGFH---GMGEKAMELFKEL 771
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Query: 67 HKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATK 122
+K EV RN P+ T L+ + Q S S G H +L+ G +P+++
Sbjct: 660 NKAGREVFQLFRNLKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAA 719
Query: 123 LINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNW-SGIPS 181
L++MY G L+ KVF + +I WN+ A G GE+ +EL+++++ S +
Sbjct: 720 LVDMYSSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEP 779
Query: 182 DRFTYTYVLKACVVSEF 198
++ ++ +L AC S F
Sbjct: 780 NKSSFISLLSACSHSGF 796
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 127/473 (26%), Positives = 220/473 (46%), Gaps = 42/473 (8%)
Query: 104 VHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGR 163
VH L+ SG D A +L+ G ++ + +Y N F+A +
Sbjct: 41 VHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGK--LYCANPVFKAYLVSSS 98
Query: 164 GEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIH 223
++ L Y + G D +T+ ++ +C+ V GK H ++HG ++ +
Sbjct: 99 PKQALGFYFDILRFGFVPDSYTFVSLI-SCIEKTCCV---DSGKMCHGQAIKHGCDQVLP 154
Query: 224 VMTTLLDVYAKFGCISYA---------------NSV----------------FRAMPAKN 252
V +L+ +Y G + A NS+ F MP KN
Sbjct: 155 VQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKN 214
Query: 253 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV 312
+SW+ MI Y + P ++ LF +MV N T+V + V
Sbjct: 215 IISWNIMISAYLGANNPGVSISLFREMVRAGFQG--NESTLVLLLNACGRSARLKEGRSV 272
Query: 313 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 372
H ++R L+S + + ALI MYG+C E+ + R+FD + + V+WN +I + +G
Sbjct: 273 HASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRP 332
Query: 373 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 432
+ +++FE MI+ + P ++F+ VLC C+ AGLV +G+ + M+ +++I P H C
Sbjct: 333 EGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWC 392
Query: 433 MVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
M +L A +EA + ++++P E P T W +LL S R N L E + L E +
Sbjct: 393 MANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETD 452
Query: 490 PWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWIEVKKKIYSF 542
P N Y LL +IY+ W DV VR+++ +R + ++PGC +++K+ ++
Sbjct: 453 PLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVHGL 505
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 110/251 (43%), Gaps = 43/251 (17%)
Query: 80 PSHKTIEVLIQSCAQKSSFSD-GRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
P T LI SC +K+ D G+ H + G DQ + L++MY G+LD A+K
Sbjct: 116 PDSYTFVSLI-SCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKK 174
Query: 139 VFDETRERTIYIWNAFFRALAMVGRGEEL------------------------------- 167
+F E +R I WN+ MV G+ L
Sbjct: 175 LFVEIPKRDIVSWNSIIA--GMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPG 232
Query: 168 --LELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVM 225
+ L+R+M +G + T +L AC S L++G+ +HA+++R ++ +
Sbjct: 233 VSISLFREMVRAGFQGNESTLVLLLNACGRSA----RLKEGRSVHASLIRTFLNSSVVID 288
Query: 226 TTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 285
T L+D+Y K + A +F ++ +N V+W+ MI + + P LELF M+
Sbjct: 289 TALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLR 348
Query: 286 SIPNSVTMVSV 296
P+ VT V V
Sbjct: 349 --PDEVTFVGV 357
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%)
Query: 81 SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVF 140
+ T+ +L+ +C + + +GR VH L+ + L+ + T LI+MY + + AR++F
Sbjct: 249 NESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIF 308
Query: 141 DETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC 193
D R WN A + GR E LEL+ M + D T+ VL C
Sbjct: 309 DSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGC 361
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 194 bits (493), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 180/350 (51%), Gaps = 7/350 (2%)
Query: 101 GRDVHRYLVDS-GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALA 159
G++VH +++ S + P++ + LI++Y + G + R+VF +++R W A A
Sbjct: 335 GKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYA 394
Query: 160 MVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYE 219
GR ++ L M G D T VL C + +++GKEIH L++ +
Sbjct: 395 ANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCA----ELRAIKQGKEIHCYALKNLFL 450
Query: 220 ENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQM 279
N+ ++T+L+ +Y+K G Y +F + +N +W+AMI CY +N +E+F M
Sbjct: 451 PNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLM 510
Query: 280 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 339
+L P+SVTM V +HG IL++ +SI V +I MYG+CG
Sbjct: 511 LLS--KHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCG 568
Query: 340 EISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
++ FD V ++W ++I YG N + AI FE M+ +G +P+ +F VL
Sbjct: 569 DLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLS 628
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 449
CS AG V+E F ML Y + P EHY+ +++LL R R++EA +L
Sbjct: 629 ICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 185/361 (51%), Gaps = 12/361 (3%)
Query: 58 IQSLCRGGNHKQALEVL-WSERNP---SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGL 113
IQ R N + AL +L + E+ + T L+++C ++ S G+ VH ++ +GL
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVG--RGEELLELY 171
+ + +L TKL++MY GS+ A+KVFDE+ +Y WNA R + G R +++L +
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
+M G+ + ++ + V K+ L++G + HA +++G ++ + T+L+D+
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFA----GASALRQGLKTHALAIKNGLFNSVFLKTSLVDM 258
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSV 291
Y K G + A VF + ++ V W AMI A N +AL LF M+ E PNSV
Sbjct: 259 YFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEE-KIYPNSV 317
Query: 292 TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINA-LITMYGRCGEISIGERVFDK 350
+ ++ VH +L+ P +++ LI +Y +CG+++ G RVF
Sbjct: 318 ILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYG 377
Query: 351 VKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
K + +SW +L+S Y NG +A++ M +G P ++ TVL C+ +++G
Sbjct: 378 SKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQG 437
Query: 411 K 411
K
Sbjct: 438 K 438
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 129/298 (43%), Gaps = 15/298 (5%)
Query: 57 LIQSLCRGGNHKQALE-VLWSER---NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L+ G QAL ++W ++ P TI ++ CA+ + G+++H Y + +
Sbjct: 389 LMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNL 448
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
+ L T L+ MY + G + ++FD +R + W A +E++R
Sbjct: 449 FLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFR 508
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
M S D T VL C + L+ GKE+H +IL+ +E V ++ +Y
Sbjct: 509 LMLLSKHRPDSVTMGRVLTVCS----DLKALKLGKELHGHILKKEFESIPFVSARIIKMY 564
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
K G + AN F A+ K S++W+A+I Y N++ A+ F QMV PN+ T
Sbjct: 565 GKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQMVSRGF--TPNTFT 622
Query: 293 MVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPV---INALITMYGRCGEISIGERV 347
+V +LR + ++ P + +I + RCG + +R+
Sbjct: 623 FTAVLSICSQAGFVDEAYRFFNLMLR--MYNLQPSEEHYSLVIELLNRCGRVEEAQRL 678
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 119/266 (44%), Gaps = 9/266 (3%)
Query: 149 YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKE 208
YI + + A E L + + GIP + T++ +L+ACV + L GK+
Sbjct: 77 YIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRK----SLLHGKQ 132
Query: 209 IHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMI--GCYAKN 266
+H +I +G E N + T L+ +Y G + A VF + N SW+A++ +
Sbjct: 133 VHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGK 192
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 326
L F +M D N ++ +V H ++ GL + +
Sbjct: 193 KRYQDVLSTFTEMRELGVDL--NVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVF 250
Query: 327 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI-HQ 385
+ +L+ MY +CG++ + RVFD++ D+V W ++I+ +N +A+ +F MI +
Sbjct: 251 LKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEE 310
Query: 386 GVSPSYISFITVLCACSHAGLVEEGK 411
+ P+ + T+L ++ GK
Sbjct: 311 KIYPNSVILTTILPVLGDVKALKLGK 336
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 115/346 (33%), Positives = 178/346 (51%), Gaps = 15/346 (4%)
Query: 203 LQKGKEIHANILRHGY-EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIG 261
L+ G+ +H + + G+ E+ + TTLL YAK G + YA VF MP + SV+W+AMIG
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 262 CYAK-----NDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
Y N KA+ LF + P TMV V VHG+I
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYI 246
Query: 317 LRRGLDSIMPVI--NALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKK 374
+ G + V AL+ MY +CG ++ VF+ +K +V +W S+ + NG G +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 375 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 434
+ M G+ P+ I+F ++L A H GLVEEG LF+SM +++ + P +EHY C+V
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIV 366
Query: 435 DLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAG 494
DLLG+A R+ EA + I MP +P + SL +C I+ + E L E+E +
Sbjct: 367 DLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEK 426
Query: 495 -------NYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 533
+YV L+++ A W +V+ +RK M +R ++ PG S++
Sbjct: 427 LSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 192 bits (487), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 131/499 (26%), Positives = 236/499 (47%), Gaps = 22/499 (4%)
Query: 57 LIQSLCRGGNHKQALEVLWS----ERNPSHKTIEVL--IQSCAQKSSFSDGRDVHRYLVD 110
+I L G H+ + V + E P+ T +L + +C + G +H +
Sbjct: 107 MISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRH-----GEQIHGNAIC 161
Query: 111 SGLDQ-DPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLE 169
SG+ + + + +++MY LG D A VF +R + WN + + G E L+
Sbjct: 162 SGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALD 221
Query: 170 LYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLL 229
+ M I D +T + V+ C + L KGK+ A ++ G+ N V+ +
Sbjct: 222 QFWLMREMEIQPDEYTVSMVVSICS----DLRELSKGKQALALCIKMGFLSNSIVLGAGI 277
Query: 230 DVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI-P 288
D+++K + + +FR + +SV ++MIG Y+ + AL LF +L S+ P
Sbjct: 278 DMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLF---ILAMTQSVRP 334
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
+ T SV VH +++ G D V +L+ MY + G + + VF
Sbjct: 335 DKFTFSSVLSSMNAVMLDHGAD-VHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVF 393
Query: 349 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI-HQGVSPSYISFITVLCACSHAGLV 407
K D++ WN++I N +++ IF ++ +Q + P ++ + +L AC +AG V
Sbjct: 394 AKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFV 453
Query: 408 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLG 467
EG +F SM + ++PG EHYAC+++LL R ++EA + + +PFEP +W +L
Sbjct: 454 NEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILC 513
Query: 468 SCRIHCNAELAERASAMLFELEPWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKV 527
+ + LAE + + E EP ++ Y++L IY W + +R M + L+
Sbjct: 514 ASLDLGDTRLAETVAKTMLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSA 573
Query: 528 PGCSWIEVKKKIYSFVSSE 546
G S I ++ ++SF + +
Sbjct: 574 QGSSKISIESSVFSFEADQ 592
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 150/349 (42%), Gaps = 37/349 (10%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
PS L+ S + + VH L+++G + Y + + +Y + GS+ A ++
Sbjct: 2 PSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQL 61
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NW----SGIPSDRF----- 184
FD+ ++ WN + L G L+L+ +M +W SG+ S F
Sbjct: 62 FDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGI 121
Query: 185 --------------TYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEE-NIHVMTTLL 229
+T+ + A +V+ ++ G++IH N + G N+ V +++
Sbjct: 122 RVFFDMQRWEIRPTEFTFSILASLVT-----CVRHGEQIHGNAICSGVSRYNLVVWNSVM 176
Query: 230 DVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPN 289
D+Y + G YA SVF M ++ VSW+ +I + +D K + L ++ + P+
Sbjct: 177 DMYRRLGVFDYALSVFLTMEDRDVVSWNCLI--LSCSDSGNKEVALDQFWLMREMEIQPD 234
Query: 290 SVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFD 349
T+ V ++ G S V+ A I M+ +C + ++F
Sbjct: 235 EYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFR 294
Query: 350 KVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 398
+++ D V NS+I Y + G+ A+++F + Q V P +F +VL
Sbjct: 295 ELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVL 343
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/465 (26%), Positives = 225/465 (48%), Gaps = 11/465 (2%)
Query: 72 EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG 131
++L S+ P + T L + ++ R +H + SGL D + ++ Y + G
Sbjct: 96 QILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAG 155
Query: 132 SLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
+ A K+F + + +WN G ++ + L+ M G + +T +
Sbjct: 156 LIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS 215
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 251
+ L +HA L+ + + +V L+++Y++ CI+ A SVF ++
Sbjct: 216 GLIDPSL----LLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEP 271
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
+ V+ S++I Y++ +AL LF ++ + P+ V + V
Sbjct: 272 DLVACSSLITGYSRCGNHKEALHLFAELRMSG--KKPDCVLVAIVLGSCAELSDSVSGKE 329
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 371
VH +++R GL+ + V +ALI MY +CG + +F + ++VS+NSLI G +G+
Sbjct: 330 VHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGF 389
Query: 372 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
A + F ++ G+ P I+F +LC C H+GL+ +G+ +FE M S++ I P EHY
Sbjct: 390 ASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYV 449
Query: 432 CMVDLLGRANRLDEAIKLIEDM--PFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
MV L+G A +L+EA + + + P + G + G+LL C +H N LAE + + +
Sbjct: 450 YMVKLMGMAGKLEEAFEFVMSLQKPIDSG--ILGALLSCCEVHENTHLAEVVAENIHKNG 507
Query: 490 PWNAGNY-VLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGCSWI 533
Y V+L+++YA W +V+ +R + + K+PG SW
Sbjct: 508 EERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISWF 552
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 177/394 (44%), Gaps = 18/394 (4%)
Query: 100 DGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALA 159
+ + +H ++ S L +DPY AT+L Y L ARK+FD ER++++WN+ RA A
Sbjct: 23 NTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYA 82
Query: 160 MVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKG-KEIHANILRHGY 218
+ +L L+ Q+ S D FTY AC+ FS KG + IH + G
Sbjct: 83 KAHQFTTVLSLFSQILRSDTRPDNFTY-----ACLARGFSESFDTKGLRCIHGIAIVSGL 137
Query: 219 EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 278
+ + ++ Y+K G I A+ +F ++P + W+ MI Y K + LF+
Sbjct: 138 GFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNL 197
Query: 279 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 338
M + PN TMV++ VH F L+ LDS V AL+ MY RC
Sbjct: 198 M--QHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRC 255
Query: 339 GEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 398
I+ VF+ + PD+V+ +SLI+ Y G K+A+ +F + G P + VL
Sbjct: 256 MCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVL 315
Query: 399 CACSHAGLVEEGKILFESMLSKYRIHPGMEH----YACMVDLLGRANRLDEAIKLIEDMP 454
+C+ GK + Y I G+E + ++D+ + L A+ L +P
Sbjct: 316 GSCAELSDSVSGK-----EVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIP 370
Query: 455 FEPGPTVWGSLLGSCRIHCNAELAERASAMLFEL 488
E + SL+ +H A A + E+
Sbjct: 371 -EKNIVSFNSLILGLGLHGFASTAFEKFTEILEM 403
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 8/157 (5%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI R GNHK+AL E+ S + P + +++ SCA+ S G++VH Y++ G
Sbjct: 279 LITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLG 338
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
L+ D + + LI+MY + G L CA +F E+ I +N+ L + G E +
Sbjct: 339 LELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFT 398
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEI 209
++ G+ D T++ +L C S L KG+EI
Sbjct: 399 EILEMGLIPDEITFSALLCTCCHSGL----LNKGQEI 431
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 127/436 (29%), Positives = 209/436 (47%), Gaps = 46/436 (10%)
Query: 96 SSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFF 155
S+FS + +H ++ L D L +LI++ G A VF++ + + + WN
Sbjct: 31 SNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMI 90
Query: 156 RALAMVGRGEELLELYRQMNWSGIPS-DRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL 214
R+L++ + E L L+ M S D+FT+ +V+KAC+ S ++ G ++H +
Sbjct: 91 RSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASS----SIRLGTQVHGLAI 146
Query: 215 RHGYEENIHVMTTLLDVYAK--------------------------FGCIS-----YANS 243
+ G+ ++ TL+D+Y K +G +S A
Sbjct: 147 KAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEI 206
Query: 244 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 303
VF MP +N VSW+AMI Y KN P +A +LF +M ++ D PN T+V++
Sbjct: 207 VFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD--DVKPNEFTIVNLLQASTQL 264
Query: 304 XXXXXXXXVHGFILRRG--LDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNS 361
VH + + G LD + ALI MY +CG + +VFD ++ + +WNS
Sbjct: 265 GSLSMGRWVHDYAHKNGFVLDCFLGT--ALIDMYSKCGSLQDARKVFDVMQGKSLATWNS 322
Query: 362 LISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKILFESMLSK 420
+I+ G +G G++A+ +FE M + V P I+F+ VL AC++ G V++G F M+
Sbjct: 323 MITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQV 382
Query: 421 YRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 480
Y I P EH ACM+ LL +A +++A L+E M +P + S G+ E E
Sbjct: 383 YGISPIREHNACMIQLLEQALEVEKASNLVESMDSDPD---FNSSFGNEYTDGMNETNET 439
Query: 481 ASAMLFELEPWNAGNY 496
S W+ G +
Sbjct: 440 PSQHQIMFTKWDTGRF 455
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 138/323 (42%), Gaps = 41/323 (12%)
Query: 187 TYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFR 246
+Y L+ C S FS + K+IH I++H + ++ L+ V + FG YA+ VF
Sbjct: 24 SYFLRTC--SNFS-----QLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFN 76
Query: 247 AMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 306
+ + ++ +W+ MI + N P +AL LF M++ + S + T V
Sbjct: 77 QLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMI-SHQSQFDKFTFPFVIKACLASSSI 135
Query: 307 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK---------------- 350
VHG ++ G + + N L+ +Y +CG+ G +VFDK
Sbjct: 136 RLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGL 195
Query: 351 VKNP---------------DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 395
V N +VVSW ++I+ Y N +A Q+F M V P+ + +
Sbjct: 196 VSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIV 255
Query: 396 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPF 455
+L A + G + G+ + + + A ++D+ + L +A K+ + M
Sbjct: 256 NLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTA-LIDMYSKCGSLQDARKVFDVMQG 314
Query: 456 EPGPTVWGSLLGSCRIHCNAELA 478
+ T W S++ S +H E A
Sbjct: 315 KSLAT-WNSMITSLGVHGCGEEA 336
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 36/244 (14%)
Query: 84 TIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
T +I++C SS G VH + +G D + L+++Y + G D RKVFD+
Sbjct: 121 TFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKM 180
Query: 144 RERTIYIWNAFFRAL-------------------------AMVG------RGEELLELYR 172
R+I W L AM+ R +E +L+R
Sbjct: 181 PGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFR 240
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
+M + + FT +L+A + L G+ +H ++G+ + + T L+D+Y
Sbjct: 241 RMQVDDVKPNEFTIVNLLQAST----QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMY 296
Query: 233 AKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
+K G + A VF M K+ +W++MI + +AL LF +M EA P+++T
Sbjct: 297 SKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVE-PDAIT 355
Query: 293 MVSV 296
V V
Sbjct: 356 FVGV 359
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ TI L+Q+ Q S S GR VH Y +G D +L T LI+MY + GSL ARKV
Sbjct: 249 PNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKV 308
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELY-RQMNWSGIPSDRFTYTYVLKAC 193
FD + +++ WN+ +L + G GEE L L+ + + D T+ VL AC
Sbjct: 309 FDVMQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSAC 363
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 194/410 (47%), Gaps = 39/410 (9%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P + T+ ++ +C++ + G+ +H V + D ++T + +MY + L+ AR+V
Sbjct: 261 PLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRV 320
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQM------NWSGIPS------------ 181
FD+TR + + W + AM G E EL+ M +W+ +
Sbjct: 321 FDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEAL 380
Query: 182 -------------DRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
D T ++L C + +Q GK+ H I RHGY+ N+ V L
Sbjct: 381 DFLTLMRQEIENIDNVTLVWILNVCS----GISDVQMGKQAHGFIYRHGYDTNVIVANAL 436
Query: 229 LDVYAKFGCISYANSVFRAMPA-KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSI 287
LD+Y K G + AN FR M ++ VSW+A++ A+ +AL F M +EA
Sbjct: 437 LDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA---K 493
Query: 288 PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERV 347
P+ T+ ++ +HGF++R G + + A++ MY +C V
Sbjct: 494 PSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEV 553
Query: 348 FDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLV 407
F + D++ WNS+I NG K+ ++F + ++GV P +++F+ +L AC G V
Sbjct: 554 FKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFLGILQACIREGHV 613
Query: 408 EEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEP 457
E G F SM +KY I P +EHY CM++L + L + + + MPF+P
Sbjct: 614 ELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFLLLMPFDP 663
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 170/333 (51%), Gaps = 8/333 (2%)
Query: 56 QLIQSLCRGGNHKQALEVLWSERNP-SHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLD 114
Q+++ L GGN +A+ VL++ P S+ E L +SC+ K+ R V +LV
Sbjct: 35 QILEHL-EGGNVSKAVSVLFASPEPVSYWLYERLFRSCSSKALVVQARKVQSHLVTFSPL 93
Query: 115 QDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQM 174
+L + I Y + G +D AR++F+E ER WNA A A G +E+ ++R+M
Sbjct: 94 PPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRM 153
Query: 175 NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK 234
N G+ + ++ VLK+C + + L+ +++H ++++GY N+ + T+++DVY K
Sbjct: 154 NRDGVRATETSFAGVLKSCGL----ILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGK 209
Query: 235 FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMV 294
+S A VF + + VSW+ ++ Y + +A+ +F +M+ + P + T+
Sbjct: 210 CRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKML--ELNVRPLNHTVS 267
Query: 295 SVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNP 354
SV +H ++ + + V ++ MY +C + RVFD+ ++
Sbjct: 268 SVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSK 327
Query: 355 DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV 387
D+ SW S +S Y +G ++A ++F+ M + +
Sbjct: 328 DLKSWTSAMSGYAMSGLTREARELFDLMPERNI 360
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 107/219 (48%), Gaps = 8/219 (3%)
Query: 79 NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARK 138
N + T+ ++ C+ S G+ H ++ G D + +A L++MY + G+L A
Sbjct: 392 NIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANI 451
Query: 139 VFDETRE-RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
F + E R WNA +A VGR E+ L + M PS ++T +L C
Sbjct: 452 WFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEAKPS-KYTLATLLAGCA--- 507
Query: 198 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
++ L GK IH ++R GY+ ++ + ++D+Y+K C YA VF+ ++ + W+
Sbjct: 508 -NIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWN 566
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSV 296
++I +N + ELF M+LE P+ VT + +
Sbjct: 567 SIIRGCCRNGRSKEVFELF--MLLENEGVKPDHVTFLGI 603
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 168/377 (44%), Gaps = 26/377 (6%)
Query: 180 PSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCIS 239
P + Y + ++C V + +++ ++++ I ++ ++ Y K GC+
Sbjct: 58 PVSYWLYERLFRSCSSKALVV----QARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVD 113
Query: 240 YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX 299
A +F MP ++ SW+A+I A+N + + +F +M + + S V
Sbjct: 114 DARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETS--FAGVLKS 171
Query: 300 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 359
+H +++ G + + +++ +YG+C +S RVFD++ NP VSW
Sbjct: 172 CGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSW 231
Query: 360 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 419
N ++ Y G+ +A+ +F M+ V P + +V+ ACS + +E GK++ ++
Sbjct: 232 NVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVI-HAIAV 290
Query: 420 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAE 479
K + + D+ + +RL+ A ++ D W S + + + L
Sbjct: 291 KLSVVADTVVSTSVFDMYVKCDRLESARRVF-DQTRSKDLKSWTSAMSG---YAMSGLT- 345
Query: 480 RASAMLFELEP------WNA--GNYVLLADIYAEA-----KMWSDVKSVRKLMGKRVLQK 526
R + LF+L P WNA G YV A + EA M +++++ + +L
Sbjct: 346 REARELFDLMPERNIVSWNAMLGGYV-HAHEWDEALDFLTLMRQEIENIDNVTLVWILNV 404
Query: 527 VPGCSWIEVKKKIYSFV 543
G S +++ K+ + F+
Sbjct: 405 CSGISDVQMGKQAHGFI 421
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 6/196 (3%)
Query: 57 LIQSLCRGGNHKQAL---EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGL 113
L+ + R G +QAL E + E PS T+ L+ CA + + G+ +H +L+ G
Sbjct: 468 LLTGVARVGRSEQALSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGY 527
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQ 173
D + +++MY + D A +VF E R + +WN+ R GR +E+ EL+
Sbjct: 528 KIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFML 587
Query: 174 MNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYA 233
+ G+ D T+ +L+AC+ Q + ++ + ++++Y
Sbjct: 588 LENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMST---KYHISPQVEHYDCMIELYC 644
Query: 234 KFGCISYANSVFRAMP 249
K+GC+ MP
Sbjct: 645 KYGCLHQLEEFLLLMP 660
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 132/552 (23%), Positives = 243/552 (44%), Gaps = 68/552 (12%)
Query: 57 LIQSLCRGGN---HKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGL 113
++ +L R G+ + A+E++ P + L++ S R +H Y+ G
Sbjct: 27 IVPALARFGSIGVLRAAVELINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGF 86
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQ 173
+ L+ L+ Y SL+ A KVFDE + + WN+ GR +E + L+ +
Sbjct: 87 VSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLE 146
Query: 174 MNWSGIPSDRFTYTYVLKAC-----------VVSEFSVYPLQKGKEIHAN---------- 212
++ S + + F++T L AC + S+ L+KG + N
Sbjct: 147 LHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCG 206
Query: 213 -------ILRHGYEEN-----------------------IHVM--------TTLLDVYAK 234
+ +H E++ H M L+D + K
Sbjct: 207 FMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVK 266
Query: 235 FGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMV 294
G + A V MP NS SW+ ++ Y ++ +A E F +M S+++V
Sbjct: 267 SGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIV 326
Query: 295 SVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNP 354
+H + GLDS + V +ALI MY +CG + E +F +
Sbjct: 327 LAAVAALAVVPWGSL--IHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRK 384
Query: 355 DVVSWNSLISMYGNNGYGKKAIQIFENMIHQG-VSPSYISFITVLCACSHAGLVEEGKI- 412
+++ WN +IS Y NG +AI++F + + + P +F+ +L CSH + E +
Sbjct: 385 NLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLG 444
Query: 413 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIH 472
FE M+++YRI P +EH ++ +G+ + +A ++I++ F W +LLG+C
Sbjct: 445 YFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSAR 504
Query: 473 CNAELAERASAMLFELEPWNAGN--YVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVPGC 530
+ + A+ +A + EL + Y++++++YA + W +V +RK+M + + K G
Sbjct: 505 KDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGS 564
Query: 531 SWIEVKKKIYSF 542
SWI+ + K S+
Sbjct: 565 SWIDSRTKCSSY 576
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/329 (29%), Positives = 167/329 (50%), Gaps = 6/329 (1%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T+ ++++C+++ + GR VH +V + D ++ T L++MY + G + RKV
Sbjct: 282 PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKV 341
Query: 140 FDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
FD R W + A A G GEE + L+R M + ++ T +L+AC S
Sbjct: 342 FDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACG----S 397
Query: 200 VYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
V L GKE+HA I+++ E+N+++ +TL+ +Y K G A +V + +P+++ VSW+AM
Sbjct: 398 VGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAM 457
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I + +AL+ +M+ E + PN T S +H +
Sbjct: 458 ISGCSSLGHESEALDFLKEMIQEGVE--PNPFTYSSALKACANSESLLIGRSIHSIAKKN 515
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
S + V +ALI MY +CG +S RVFD + ++VSW ++I Y NG+ ++A+++
Sbjct: 516 HALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLM 575
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVE 408
M +G F T+L C L E
Sbjct: 576 YRMEAEGFEVDDYIFATILSTCGDIELDE 604
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 207/420 (49%), Gaps = 17/420 (4%)
Query: 78 RNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCAR 137
R + + L+ C++++ F GR VH +V G+ + + + L+ Y + G L A
Sbjct: 180 RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG-NLIVESSLVYFYAQCGELTSAL 238
Query: 138 KVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSE 197
+ FD E+ + W A A + G G + + ++ M + FT +LKAC +
Sbjct: 239 RAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEK 298
Query: 198 FSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWS 257
L+ G+++H+ +++ + ++ V T+L+D+YAK G IS VF M +N+V+W+
Sbjct: 299 ----ALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWT 354
Query: 258 AMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFIL 317
++I +A+ +A+ LF +++ I N++T+VS+ +H I+
Sbjct: 355 SIIAAHAREGFGEEAISLFR--IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQII 412
Query: 318 RRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
+ ++ + + + L+ +Y +CGE V ++ + DVVSW ++IS + G+ +A+
Sbjct: 413 KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALD 472
Query: 378 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 437
+ MI +GV P+ ++ + L AC+++ + G+ + S+ K + + ++ +
Sbjct: 473 FLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSI-HSIAKKNHALSNVFVGSALIHMY 531
Query: 438 GRANRLDEAIKLIEDMPFEPGPTVWGSLL------GSCRIHCNAELAERASAMLFELEPW 491
+ + EA ++ + MP E W +++ G CR +L R A FE++ +
Sbjct: 532 AKCGFVSEAFRVFDSMP-EKNLVSWKAMIMGYARNGFCREA--LKLMYRMEAEGFEVDDY 588
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 173/361 (47%), Gaps = 18/361 (4%)
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQ 173
DQ Y LI+ LG L ARKVFD E+ W A G +E L+
Sbjct: 114 DQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFED 173
Query: 174 MNWSGIPSDRFT----YTYVLKACVV-SEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
GI RFT + +L C +EF + G+++H N+++ G N+ V ++L
Sbjct: 174 YVKHGI---RFTNERMFVCLLNLCSRRAEFEL-----GRQVHGNMVKVGVG-NLIVESSL 224
Query: 229 LDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 288
+ YA+ G ++ A F M K+ +SW+A+I ++ +KA+ +F M+ +P
Sbjct: 225 VYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW--FLP 282
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
N T+ S+ VH +++R + + + V +L+ MY +CGEIS +VF
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342
Query: 349 DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
D + N + V+W S+I+ + G+G++AI +F M + + + ++ +++L AC G +
Sbjct: 343 DGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALL 402
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGS 468
GK L ++ K I + + +V L + +A +++ +P W +++
Sbjct: 403 LGKELHAQII-KNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLP-SRDVVSWTAMISG 460
Query: 469 C 469
C
Sbjct: 461 C 461
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 131/279 (46%), Gaps = 7/279 (2%)
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKN 266
K IHA L+ ++ I+ L+ + G + YA VF +MP KN+V+W+AMI Y K
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 267 DMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMP 326
+ +A LF V N V + VHG +++ G+ +++
Sbjct: 162 GLEDEAFALFEDYVKHGI-RFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNLI- 219
Query: 327 VINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQG 386
V ++L+ Y +CGE++ R FD ++ DV+SW ++IS G+G KAI +F M++
Sbjct: 220 VESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHW 279
Query: 387 VSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA 446
P+ + ++L ACS + G+ + S++ K I + ++D+ + + +
Sbjct: 280 FLPNEFTVCSILKACSEEKALRFGRQV-HSLVVKRMIKTDVFVGTSLMDMYAKCGEISDC 338
Query: 447 IKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAML 485
K+ + M W S++ + H E A ++
Sbjct: 339 RKVFDGMS-NRNTVTWTSIIAA---HAREGFGEEAISLF 373
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 4/157 (2%)
Query: 41 NPVKDIKSXXXXXXXQLIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKS 96
N ++ + S +I G+ +AL E++ P+ T +++CA
Sbjct: 441 NVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSE 500
Query: 97 SFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFR 156
S GR +H + + ++ + LI+MY + G + A +VFD E+ + W A
Sbjct: 501 SLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIM 560
Query: 157 ALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKAC 193
A G E L+L +M G D + + +L C
Sbjct: 561 GYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 167/358 (46%), Gaps = 35/358 (9%)
Query: 108 LVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEEL 167
L D + D T +I + ++ L+ ARK FD E+++ WNA A G E+
Sbjct: 189 LFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDA 248
Query: 168 LELYRQMNWSGIPSDRFTYTYVLKACVVS-----EFSVYPLQKGKEIHANIL-------- 214
L L+ M G+ + T+ V+ AC S+ L K + N
Sbjct: 249 LRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDM 308
Query: 215 ---------------RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAM 259
G + N+ ++ Y + G +S A +F MP +N VSW+++
Sbjct: 309 HAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSL 368
Query: 260 IGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRR 319
I YA N A+E F M+ + DS P+ VTM+SV + +I +
Sbjct: 369 IAGYAHNGQAALAIEFFEDMI-DYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN 427
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
+ +LI MY R G + +RVFD++K DVVS+N+L + + NG G + + +
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLL 487
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 437
M +G+ P +++ +VL AC+ AGL++EG+ +F+S+ +P +HYACM DLL
Sbjct: 488 SKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 150/375 (40%), Gaps = 79/375 (21%)
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
G +DPY+ +++MY + S++ ARKVFD+ +R WN G EE +L+
Sbjct: 131 GFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNKEEACKLF 190
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
M E ++ T ++
Sbjct: 191 DMMP-------------------------------------------ENDVVSWTVMITG 207
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSV 291
+AK + A F MP K+ VSW+AM+ YA+N AL LF+ M+ PN
Sbjct: 208 FAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVR--PNET 265
Query: 292 TMVSVXXXXXXXXXXXXXXXVHGFI---------------------------LRR----- 319
T V V + I RR
Sbjct: 266 TWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNEL 325
Query: 320 GLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIF 379
G + NA+I+ Y R G++S ++FD + +VVSWNSLI+ Y +NG AI+ F
Sbjct: 326 GTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFF 385
Query: 380 ENMIHQGVS-PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
E+MI G S P ++ I+VL AC H +E G + + + K +I Y ++ +
Sbjct: 386 EDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVD-YIRKNQIKLNDSGYRSLIFMYA 444
Query: 439 RANRLDEAIKLIEDM 453
R L EA ++ ++M
Sbjct: 445 RGGNLWEAKRVFDEM 459
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/383 (20%), Positives = 163/383 (42%), Gaps = 54/383 (14%)
Query: 92 CAQKSSFSDGRDVH-RYLVDSGLDQDPYLATKLINMYHELGSLDC-ARKVFDETRERTIY 149
+Q +F +H + +V + L + Y A+++I+ L + R +FD ++
Sbjct: 13 ASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFPNVF 72
Query: 150 IWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEI 209
+ N+ F+ + + ++L LY Q + GI D F++ V+K+ F +
Sbjct: 73 VVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSA--GRFGIL-------F 123
Query: 210 HANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMP 269
A + + G+ ++ +V ++D+Y K + A VF + + W+ MI Y K
Sbjct: 124 QALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNK 183
Query: 270 VKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVIN 329
+A +LF M N V +V
Sbjct: 184 EEACKLFDMMP-------ENDVVSWTV--------------------------------- 203
Query: 330 ALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 389
+IT + + ++ + FD++ VVSWN+++S Y NG+ + A+++F +M+ GV P
Sbjct: 204 -MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRP 262
Query: 390 SYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL 449
+ +++ V+ ACS + L + ++ + R+ ++D+ + + A ++
Sbjct: 263 NETTWVIVISACSFRADPSLTRSLVK-LIDEKRVRLNCFVKTALLDMHAKCRDIQSARRI 321
Query: 450 IEDMPFEPGPTVWGSLL-GSCRI 471
++ + W +++ G RI
Sbjct: 322 FNELGTQRNLVTWNAMISGYTRI 344
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 57 LIQSLCRGGNHKQALEVL-----WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
LI G A+E + + P T+ ++ +C + G + Y+ +
Sbjct: 368 LIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN 427
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
+ + LI MY G+L A++VFDE +ER + +N F A A G G E L L
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLL 487
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANI 213
+M GI DR TYT VL AC + L++G+ I +I
Sbjct: 488 SKMKDEGIEPDRVTYTSVLTACNRAGL----LKEGQRIFKSI 525
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 102/256 (39%), Gaps = 42/256 (16%)
Query: 100 DGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALA 159
D + R + G ++ +I+ Y +G + AR++FD +R + WN+ A
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 160 MVGRGEELLELYRQM-NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGY 218
G+ +E + M ++ D T VL AC + L+ G I I ++
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACG----HMADLELGDCIVDYIRKNQI 429
Query: 219 EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 278
+ N +L+ +YA+ G + A VF M ++ VS++ + +A N V+ L L +
Sbjct: 430 KLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSK 489
Query: 279 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 338
M E + P+ VT SV +T R
Sbjct: 490 MKDEGIE--PDRVTYTSV-----------------------------------LTACNRA 512
Query: 339 GEISIGERVFDKVKNP 354
G + G+R+F ++NP
Sbjct: 513 GLLKEGQRIFKSIRNP 528
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/291 (18%), Positives = 114/291 (39%), Gaps = 23/291 (7%)
Query: 240 YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXX 299
Y +F ++ N ++M ++K DM L L+ Q C +P++ + V
Sbjct: 58 YTRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQR--SRCGIMPDAFSFPVVIKS 115
Query: 300 XXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSW 359
+ + G V N ++ MY + + +VFD++ W
Sbjct: 116 AGRFGIL-----FQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDW 170
Query: 360 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 419
N +IS Y G ++A ++F+ M V +S+ ++ + +E + F+ M
Sbjct: 171 NVMISGYWKWGNKEEACKLFDMMPENDV----VSWTVMITGFAKVKDLENARKYFDRMPE 226
Query: 420 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM---PFEPGPTVWGSLLGSCRIHCNAE 476
K + + M+ + ++A++L DM P T W ++ +C +
Sbjct: 227 K-----SVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPS 281
Query: 477 LAERASAMLFELE-PWNAGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQK 526
L ++ E N L D++A+ + D++S R++ + Q+
Sbjct: 282 LTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR---DIQSARRIFNELGTQR 329
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 103/182 (56%)
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 371
VH L+ + N +I+M+G C I+ +RVFD + + D+ SW+ ++ Y +NG
Sbjct: 258 VHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGM 317
Query: 372 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
G A+ +FE M G+ P+ +F+TV AC+ G +EE + F+SM +++ I P EHY
Sbjct: 318 GDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYL 377
Query: 432 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPW 491
++ +LG+ L EA + I D+PFEP W ++ R+H + +L + ++ +++P
Sbjct: 378 GVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRNYARLHGDIDLEDYMEELMVDVDPS 437
Query: 492 NA 493
A
Sbjct: 438 KA 439
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 94/205 (45%), Gaps = 8/205 (3%)
Query: 58 IQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDP 117
+ LC+ +K A+E+L P + +L +SCA S + VH + + S DP
Sbjct: 212 VMRLCQRRLYKDAIELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDP 271
Query: 118 YLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWS 177
L +I+M+ E S+ A++VFD ++ + W+ A + G G++ L L+ +M
Sbjct: 272 KLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKH 331
Query: 178 GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILR--HGYEENIHVMTTLLDVYAKF 235
G+ + T+ V AC +V +++ +H + ++ HG +L V K
Sbjct: 332 GLKPNEETFLTVFLACA----TVGGIEEAF-LHFDSMKNEHGISPKTEHYLGVLGVLGKC 386
Query: 236 GCISYANSVFRAMPAKNSVS-WSAM 259
G + A R +P + + W AM
Sbjct: 387 GHLVEAEQYIRDLPFEPTADFWEAM 411
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 170/401 (42%), Gaps = 23/401 (5%)
Query: 82 HKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFD 141
+ + ++I ++ S ++ L + G D Y T LI+ + G A VF
Sbjct: 173 NSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFK 232
Query: 142 ETRER----TIYIWNAFFRALAMVGRG-EELLELYRQMNWSGIPSDRFTYTYVLKACVVS 196
+ E T+ +N +G ++ L +M GI D +TY ++ C
Sbjct: 233 KMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRG 292
Query: 197 EFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP----AKN 252
Q+ ++ + G+ + LLDVY K A V M + +
Sbjct: 293 SLH----QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPS 348
Query: 253 SVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXV 312
V+++++I YA++ M +A+EL +QM + P+ T ++ +
Sbjct: 349 IVTYNSLISAYARDGMLDEAMELKNQMAEKGTK--PDVFTYTTLLSGFERAGKVESAMSI 406
Query: 313 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLISMYGN 368
+ G + NA I MYG G+ + ++FD++ +PD+V+WN+L++++G
Sbjct: 407 FEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQ 466
Query: 369 NGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGME 428
NG + +F+ M G P +F T++ A S G E+ ++ ML + P +
Sbjct: 467 NGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDA-GVTPDLS 525
Query: 429 HYACMVDLLGRANRLDEAIKLI---EDMPFEPGPTVWGSLL 466
Y ++ L R +++ K++ ED +P + SLL
Sbjct: 526 TYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/476 (19%), Positives = 184/476 (38%), Gaps = 91/476 (19%)
Query: 64 GGNH--KQALEVL----WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDP 117
G +H K+A++VL + +PS T LI + A+ + ++ + + G D
Sbjct: 325 GKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Query: 118 YLATKLINMYHELGSLDCARKVFDETR----ERTIYIWNAFFRALAMVGRGEELLELYRQ 173
+ T L++ + G ++ A +F+E R + I +NAF + G+ E+++++ +
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 174 MNWSGIPSDRFTYTYVL--------------------KACVVSEFSVY-----------P 202
+N G+ D T+ +L +A V E +
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 203 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP----AKNSVSWSA 258
++ ++ +L G ++ T+L A+ G + V M N +++ +
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 259 MIGCYAKNDMPVKALELFHQMVLEA---------------------CDSIPNS------- 290
++ YA K + L H + E CD +P +
Sbjct: 565 LLHAYANG----KEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSEL 620
Query: 291 ---------VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEI 341
T+ S+ V ++ RG M N+L+ M+ R +
Sbjct: 621 KERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADF 680
Query: 342 SIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
E + ++ PD++S+N++I Y N + A +IF M + G+ P I++ T
Sbjct: 681 GKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTF 740
Query: 398 LCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
+ + + + EE + M+ K+ P Y +VD + NR DEA +ED+
Sbjct: 741 IGSYAADSMFEEAIGVVRYMI-KHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 10/166 (6%)
Query: 329 NALITMYGRCGEISIGERVFDKVKNPDVVSWNS-----LISMYGNNGYGKKAIQIFENMI 383
NA+I MY C + +VF+++ P+ WNS ++ + NNGYG++AI +F
Sbjct: 158 NAIIEMYSGCCSVDDALKVFEEM--PE---WNSGTLCVMMRCFVNNGYGEEAIDLFTRFK 212
Query: 384 HQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRL 443
+G P+ F V C+ G V+EG + F++M +Y I P MEHY + +L + L
Sbjct: 213 EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 444 DEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
DEA+ +E MP EP VW +L+ R+H + EL +R + ++ +L+
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 85/160 (53%)
Query: 331 LITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPS 390
L+ MY CG + VF+K+ ++ +W +I + NG+G+ AI +F +G P
Sbjct: 295 LLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPD 354
Query: 391 YISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 450
F + AC G V+EG + FESM Y I P +E Y +V++ LDEA++ +
Sbjct: 355 GQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFLDEALEFV 414
Query: 451 EDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEP 490
E MP EP VW +L+ R+H N EL + + ++ L+P
Sbjct: 415 ERMPMEPNVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP 454
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 2/178 (1%)
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGY 371
VH FI S + N++I MY CG + VF+ + ++ +W +I + NG
Sbjct: 203 VHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQ 262
Query: 372 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
G+ AI F +G P F + AC G + EG + FESM +Y I P MEHY
Sbjct: 263 GEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEHYV 322
Query: 432 CMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
+V +L LDEA++ +E M EP +W +L+ R+H + L +R M+ +L+
Sbjct: 323 SLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGDLILGDRCQDMVEQLD 378
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 4/142 (2%)
Query: 58 IQSLCRGGNHKQALEVLWSERNPSH----KTIEVLIQSCAQKSSFSDGRDVHRYLVDSGL 113
+ S+CR G K+A+E++ S RN + + + Q C + + + VH ++ S
Sbjct: 153 LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEAKVVHEFITSSVG 212
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQ 173
D +I MY GS++ A VF+ ER + W R A G+GE+ ++ + +
Sbjct: 213 ISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSR 272
Query: 174 MNWSGIPSDRFTYTYVLKACVV 195
G D + + AC V
Sbjct: 273 FKQEGNKPDGEMFKEIFFACGV 294
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 4/172 (2%)
Query: 322 DSIMPV----INALITMYGRCGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQ 377
D I P+ + +I MY C VF+++ + +W ++I NG G++AI
Sbjct: 136 DCITPLDARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAID 195
Query: 378 IFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLL 437
+F I +G P F V AC G + EG + FESM Y + ME Y ++++L
Sbjct: 196 MFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEML 255
Query: 438 GRANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
LDEA+ +E M EP +W +L+ C + EL +R + ++ +L+
Sbjct: 256 AACGHLDEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELIKKLD 307
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 159/387 (41%), Gaps = 55/387 (14%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ ++I ++ +V + G+ + + T LIN Y G + + ++
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 140 FDETRER----TIYIWNAFFRALAMVGRG-EELLELYRQMNWSGIPSDRFTYTYVLKACV 194
D + +I +N A A G E LL L+ +M GI D TY +L AC
Sbjct: 199 LDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA 258
Query: 195 VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV 254
+ + + + + G ++ + L++ + K + + M + S+
Sbjct: 259 IRGLG----DEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSL 314
Query: 255 ----SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 310
S++ ++ YAK+ +A+ +FHQM C PN+ T
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGC--TPNANTY----------------- 355
Query: 311 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLISMY 366
+ L+ ++G+ G ++F ++K +PD ++N LI ++
Sbjct: 356 ------------------SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVF 397
Query: 367 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 426
G GY K+ + +F +M+ + + P ++ ++ AC GL E+ + + + M + I P
Sbjct: 398 GEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPS 456
Query: 427 MEHYACMVDLLGRANRLDEAIKLIEDM 453
+ Y +++ G+A +EA+ M
Sbjct: 457 SKAYTGVIEAFGQAALYEEALVAFNTM 483
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 99/484 (20%), Positives = 194/484 (40%), Gaps = 54/484 (11%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI + R G ++ +LE+L +N PS T +I +CA+ G
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACAR----------------GG 225
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYR 172
LD + L M HE D I +N A A+ G G+E ++R
Sbjct: 226 LDWEGLLGL-FAEMRHEGIQPD-------------IVTYNTLLSACAIRGLGDEAEMVFR 271
Query: 173 QMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVY 232
MN GI D TY+++++ + L+K ++ + G +I LL+ Y
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFG----KLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAY 327
Query: 233 AKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIP 288
AK G I A VF M A N+ ++S ++ + ++ +LF +M ++ ++ P
Sbjct: 328 AKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM--KSSNTDP 385
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
++ T + + ++ ++ M +I G+ G ++
Sbjct: 386 DAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKIL 445
Query: 349 DKVKNPDVV----SWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA 404
+ D+V ++ +I +G ++A+ F M G +PS +F ++L + +
Sbjct: 446 QYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARG 505
Query: 405 GLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPTVWGS 464
GLV+E + + S L I + + ++ + + +EA+K DM +
Sbjct: 506 GLVKESEAIL-SRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERT 564
Query: 465 LLGSCRIHCNAELAERASAMLFELEPWNAGN----YVLLADIYAEAKMWSDVKS-VRKLM 519
L ++ A L + E++ + Y ++ +Y + + W DV + +++
Sbjct: 565 LEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEML 624
Query: 520 GKRV 523
RV
Sbjct: 625 SNRV 628
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/408 (21%), Positives = 171/408 (41%), Gaps = 37/408 (9%)
Query: 82 HKTIEVLIQSCAQKSSFS------DGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDC 135
H+ IE+ ++ ++S +S D + YL LD Y T +++ Y G +
Sbjct: 175 HQVIEIFVRILGRESQYSVAAKLLDKIPLQEYL----LDVRAY--TTILHAYSRTGKYEK 228
Query: 136 ARKVFDETRER----TIYIWNAFFRALAMVGRG-EELLELYRQMNWSGIPSDRFTYTYVL 190
A +F+ +E T+ +N +GR ++L + +M G+ D FT + VL
Sbjct: 229 AIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVL 288
Query: 191 KACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAM-- 248
AC L++ KE A + GYE LL V+ K G + A SV + M
Sbjct: 289 SACAREGL----LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEE 344
Query: 249 ---PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXX 305
PA +SV+++ ++ Y + +A + M + +PN++T +V
Sbjct: 345 NSCPA-DSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGV--MPNAITYTTVIDAYGKAGK 401
Query: 306 XXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNS 361
+ + G NA++++ G+ + ++ +K+ P+ +WN+
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 362 LISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKY 421
++++ GN G K ++F M G P +F T++ A G + ++ M ++
Sbjct: 462 MLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEM-TRA 520
Query: 422 RIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP---FEPGPTVWGSLL 466
+ + Y +++ L R +I DM F+P T + +L
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 76/148 (51%), Gaps = 8/148 (5%)
Query: 329 NALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIH 384
NAL+ ++G+ G + V +++ D V++N L++ Y G+ K+A + E M
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 385 QGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLD 444
+GV P+ I++ TV+ A AG +E LF SM + P Y ++ LLG+ +R +
Sbjct: 380 KGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV-PNTCTYNAVLSLLGKKSRSN 438
Query: 445 EAIKLIEDMPFE---PGPTVWGSLLGSC 469
E IK++ DM P W ++L C
Sbjct: 439 EMIKMLCDMKSNGCSPNRATWNTMLALC 466
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/429 (19%), Positives = 164/429 (38%), Gaps = 58/429 (13%)
Query: 57 LIQSLCRGGNHKQALEVLWS-ERN--PSHKTIEVLIQSCAQKSSFS-DGRDVHRYLVDSG 112
L+Q + G + +AL VL E N P+ + + ++ FS + V + G
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG 381
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRGEELL 168
+ + T +I+ Y + G D A K+F +E +NA L R E++
Sbjct: 382 VMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMI 441
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
++ M +G +R T+ +L C + + +E+ + G+E + TL
Sbjct: 442 KMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKS----CGFEPDRDTFNTL 497
Query: 229 LDVYAKFG-------------------CISYANSVFRAMPAK------------------ 251
+ Y + G C++ N++ A+ K
Sbjct: 498 ISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGF 557
Query: 252 --NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 309
S+S M+ CYAK + +E + E P+ + + ++
Sbjct: 558 KPTETSYSLMLQCYAKGGNYL-GIERIENRIKEG-QIFPSWMLLRTLLLANFKCRALAGS 615
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLISM 365
+ G M + N++++++ R E + + ++ +PD+V++NSL+ M
Sbjct: 616 ERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDM 675
Query: 366 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 425
Y G KA +I + + + P +S+ TV+ GL++E + M + I P
Sbjct: 676 YVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER-GIRP 734
Query: 426 GMEHYACMV 434
+ Y V
Sbjct: 735 CIFTYNTFV 743
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 184/425 (43%), Gaps = 30/425 (7%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELG----SLDC 135
P T LI+ + S+ + +V++G D ++N G +LD
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 136 ARKVFDETRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CV 194
RK+ + + ++ ++ +L G + + L+++M GI S TY +++ C
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 195 VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK--- 251
+++ G + +++ N+ LLDV+ K G + AN +++ M +
Sbjct: 276 AGKWN-----DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGIS 330
Query: 252 -NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 310
N ++++ ++ Y + +A + MV C P+ VT S+
Sbjct: 331 PNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCS--PDIVTFTSLIKGYCMVKRVDDGM 388
Query: 311 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMY 366
V I +RGL + + L+ + + G+I + E +F ++ + PDV+++ L+
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 367 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 426
+NG +KA++IFE++ + + + T++ G VE+ LF S+ K + P
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCK-GVKPN 507
Query: 427 MEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSCRIHC-NAELAERAS 482
+ Y M+ L + L EA L+ M + P + +L+ R H + +L AS
Sbjct: 508 VMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI---RAHLRDGDLT--AS 562
Query: 483 AMLFE 487
A L E
Sbjct: 563 AKLIE 567
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/389 (18%), Positives = 168/389 (43%), Gaps = 47/389 (12%)
Query: 84 TIEVLIQSCAQK-SSFSDGRDVHRYLVDSGL---DQDPYLATKLINMYHELGSLDCARKV 139
TI SC + SS S+G R + SG+ +D +A ++ E+
Sbjct: 34 TISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIA-----LFQEM--------- 79
Query: 140 FDETRER---TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA---C 193
R R ++ ++ FF A+A + +L+ +Q+ +GI + +T ++ C
Sbjct: 80 ---IRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRC 136
Query: 194 VVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK-- 251
+ F+ L K +++ GYE + TL+ G +S A + M
Sbjct: 137 CKTCFAYSVLGK-------VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGC 189
Query: 252 --NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 309
+ V++++++ ++ AL+L +M E + + T ++
Sbjct: 190 QPDVVTYNSIVNGICRSGDTSLALDLLRKM--EERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISM 365
+ + +G+ S + N+L+ + G+ + G + + + P+V+++N L+ +
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 366 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA-CSHAGLVEEGKILFESMLSKYRIH 424
+ G ++A ++++ MI +G+SP+ I++ T++ C L E +L ++ + +
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML--DLMVRNKCS 365
Query: 425 PGMEHYACMVDLLGRANRLDEAIKLIEDM 453
P + + ++ R+D+ +K+ ++
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 108/209 (51%), Gaps = 11/209 (5%)
Query: 88 LIQSCAQKSSFSDGRDVHRYLVDSGL--DQDPYLATKLINMYHELGSLDCARKVFDETRE 145
++++CA F G+ VH G ++D YL+ LI Y E L+ A V +
Sbjct: 199 VLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSN 258
Query: 146 RTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACV-VSEFSVYPLQ 204
W A G +E++ + +M GI + ++ VLKAC VS+ +
Sbjct: 259 ANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGG----R 314
Query: 205 KGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS-WSAMIGCY 263
G+++HAN ++ G+E + + L+++Y K+G + A VF++ + SVS W+AM+ Y
Sbjct: 315 SGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASY 374
Query: 264 AKNDMPVKALELFHQMV---LEACDSIPN 289
+N + ++A++L +QM ++A D++ N
Sbjct: 375 MQNGIYIEAIKLLYQMKATGIKAHDTLLN 403
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 27/316 (8%)
Query: 89 IQSCAQKSSF--SDGRDVHR---YLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDET 143
I SC K S +D R H +++ S + +L+ M+ G LD R++FD
Sbjct: 90 IYSCLAKESARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRM 149
Query: 144 RERTIYIWNAFFRALAMVGRGEELLELY------RQMNWSGIPSDRFTYTYVLKACVVSE 197
R + W F +G E+ L+ Q IPS + VLKAC +
Sbjct: 150 PHRDFHSWAIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPS--WILGCVLKACAM-- 205
Query: 198 FSVYPLQKGKEIHANILRHGY--EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSVS 255
+ + GK++HA + G+ EE+ ++ +L+ Y +F C+ AN V + N+V+
Sbjct: 206 --IRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVA 263
Query: 256 WSAMIGCYAKNDMPVKAL-ELFHQMVLEACDSIPNSVTMVS--VXXXXXXXXXXXXXXXV 312
W+A + ND E+ + I +V++ S + V
Sbjct: 264 WAAKV----TNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQV 319
Query: 313 HGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNPDVVS-WNSLISMYGNNGY 371
H ++ G +S + LI MYG+ G++ E+VF K+ VS WN++++ Y NG
Sbjct: 320 HANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNGI 379
Query: 372 GKKAIQIFENMIHQGV 387
+AI++ M G+
Sbjct: 380 YIEAIKLLYQMKATGI 395
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 178/414 (42%), Gaps = 26/414 (6%)
Query: 57 LIQSLCRGG---NHKQA-LEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L+ SL R G KQ +E+L + P+ T ++ + + + +V++G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETR----ERTIYIWNAFFRALAMVGRGEELL 168
LD D + T LI Y + LD A KVF+E R + L + R +E +
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308
Query: 169 ELYRQM-NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
+L+ +M + P+ R TYT ++K+ SE L KE+ G + NIH T
Sbjct: 309 DLFVKMKDDECFPTVR-TYTVLIKSLCGSERKSEALNLVKEMEET----GIKPNIHTYTV 363
Query: 228 LLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
L+D A + M K N ++++A+I Y K M A+++ M E+
Sbjct: 364 LIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM--ES 421
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
PN+ T + ++ + R+ L ++ N+LI R G
Sbjct: 422 RKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVV-TYNSLIDGQCRSGNFDS 480
Query: 344 GERVF----DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
R+ D+ PD ++ S+I + ++A +F+++ +GV+P+ + + ++
Sbjct: 481 AYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
AG V+E ++ E MLSK + P + ++ L +L EA L E M
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCL-PNSLTFNALIHGLCADGKLKEATLLEEKM 593
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 144/365 (39%), Gaps = 46/365 (12%)
Query: 57 LIQSLCRGGNHKQALEVL--WSERN--PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI CR GN A +L ++R P T +I S + + D+ L G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIY----IWNAFFRALAMVGRGEELL 168
++ + + T LI+ Y + G +D A + ++ + +NA L G+ +E
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHA-----NILRHGYEENIH 223
L +M G+ T T ++ L+ G HA +L G + + H
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRL---------LKDGDFDHAYSRFQQMLSSGTKPDAH 638
Query: 224 VMTTLLDVYAKFGCISYANSVFRAMPAKNSVS-----WSAMIGCYAKNDMPVKALELFHQ 278
TT + Y + G + A + M +N VS +S++I Y A ++ +
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKM-RENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 279 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD-SIMPVINALITMYGR 337
M C+ P+ T +S+ H ++ G P + A+ M
Sbjct: 698 MRDTGCE--PSQHTFLSLIK--------------HLLEMKYGKQKGSEPELCAMSNMMEF 741
Query: 338 CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMI-HQGVSPSYISFIT 396
+ + E++ + P+ S+ LI G + A ++F++M ++G+SPS + F
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801
Query: 397 VLCAC 401
+L C
Sbjct: 802 LLSCC 806
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 183/420 (43%), Gaps = 43/420 (10%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHK----TIEVLIQSCAQKSS----FSDGRDVHRYL 108
L+Q+ R ++ +A +V R HK +L+ + A+ F D + H
Sbjct: 209 LLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRH--- 265
Query: 109 VDSGLDQDPYLATKLINMYHELGSLDCARKVFDE--TRERTIYI--WNAFFRALAMVGRG 164
+D Y T +I +G D A +F+E T T+ + +N + LA
Sbjct: 266 ----CRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMV 321
Query: 165 EELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHV 224
++ ++++ +M +G + +TY+ +L +V+E + L EI + G +
Sbjct: 322 DKAIQVFSRMVETGCRPNEYTYSLLLN-LLVAEGQLVRLDGVVEISKRYMTQG------I 374
Query: 225 MTTLLDVYAKFGCISYANSVFRAM---PAKNSV-SWSAMIGCYAKNDMPVKALELFHQMV 280
+ L+ +K G +S A+ +F M P K S+ +M+ ++A+E+ ++
Sbjct: 375 YSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH 434
Query: 281 LEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVI---NALITMYGR 337
+ + +++ +V +H + D P I N LI +GR
Sbjct: 435 EKGV--VTDTMMYNTVFSALGKLKQISH---IHDLFEKMKKDGPSPDIFTYNILIASFGR 489
Query: 338 CGEISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYIS 393
GE+ +F++++ PD++S+NSLI+ G NG +A F+ M +G++P ++
Sbjct: 490 VGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVT 549
Query: 394 FITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
+ T++ VE LFE ML K P + Y ++D L + R EA+ L M
Sbjct: 550 YSTLMECFGKTERVEMAYSLFEEMLVK-GCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 159/365 (43%), Gaps = 25/365 (6%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHKTIEV-----LIQSCAQKSSFSDGRDVHRYLVDS 111
+I+++ R G +A+ L++E T+ V L+Q A+ V +V++
Sbjct: 276 MIRTMGRIGKCDEAVG-LFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVET 334
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFD-ETRERTIYIWNAFFRALAMVGRGEELLEL 170
G + Y + L+N+ G L V + R T I++ R L+ +G E L
Sbjct: 335 GCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRL 394
Query: 171 YRQMNWS-GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLL 229
+ M WS + +R +Y +L++ + ++ ++ +IH G + + T+
Sbjct: 395 FCDM-WSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIH----EKGVVTDTMMYNTVF 449
Query: 230 DVYAKFGCISYANSVFRAM----PAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD 285
K IS+ + +F M P+ + +++ +I + + +A+ +F + LE D
Sbjct: 450 SALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEE--LERSD 507
Query: 286 SIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGE 345
P+ ++ S+ + +GL+ + + L+ +G+ + +
Sbjct: 508 CKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAY 567
Query: 346 RVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV--LC 399
+F+++ P++V++N L+ NG +A+ ++ M QG++P I++ + L
Sbjct: 568 SLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQ 627
Query: 400 ACSHA 404
+ SH
Sbjct: 628 SVSHG 632
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 148/314 (47%), Gaps = 24/314 (7%)
Query: 166 ELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHV 224
E+LE R NW + ++ + +++ + G E ++L + G N+
Sbjct: 124 EILEWLRYQNW-------WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVIS 176
Query: 225 MTTLLDVYAKFGCISYANSVFRAM----PAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
T L++ Y + G + A ++FR M P +++++ ++ + + D +A E+F ++
Sbjct: 177 YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLL 236
Query: 281 LEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 339
E + P+ + V ++ +G+ N+L++
Sbjct: 237 DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK 296
Query: 340 EISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 395
E+S +++D+++ PDVVS+ LI YG ++A+ +FE M+ GV P++ ++
Sbjct: 297 EVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 353
Query: 396 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP- 454
+L A + +G+VE+ K +F+SM + RI P + Y M+ A+ ++ A K + +
Sbjct: 354 ILLDAFAISGMVEQAKTVFKSM-RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 412
Query: 455 --FEPGPTVWGSLL 466
FEP +G+L+
Sbjct: 413 DGFEPNIVTYGTLI 426
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 124/294 (42%), Gaps = 18/294 (6%)
Query: 57 LIQSLCRGG--NHKQAL--EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVD-- 110
L++S RGG N+ +A+ + S PS T ++++++ + F + +V L+D
Sbjct: 180 LMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK 239
Query: 111 -SGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRAL-AMVGRGEELL 168
S L D + +I MY + G+ + ARKVF + + + +L + +E+
Sbjct: 240 KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS 299
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
++Y QM S I D +Y ++KA + L + +L G L
Sbjct: 300 KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALS----VFEEMLDAGVRPTHKAYNIL 355
Query: 229 LDVYAKFGCISYANSVFRAMPAKNSV----SWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
LD +A G + A +VF++M S++ M+ Y A + F ++ ++
Sbjct: 356 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 415
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 338
+ PN VT ++ V+ + G+ + ++ ++ GRC
Sbjct: 416 E--PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRC 467
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/314 (22%), Positives = 148/314 (47%), Gaps = 24/314 (7%)
Query: 166 ELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL-RHGYEENIHV 224
E+LE R NW + ++ + +++ + G E ++L + G N+
Sbjct: 131 EILEWLRYQNW-------WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVIS 183
Query: 225 MTTLLDVYAKFGCISYANSVFRAM----PAKNSVSWSAMIGCYAKNDMPVKALELFHQMV 280
T L++ Y + G + A ++FR M P +++++ ++ + + D +A E+F ++
Sbjct: 184 YTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLL 243
Query: 281 LEACDSI-PNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 339
E + P+ + V ++ +G+ N+L++
Sbjct: 244 DEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYK 303
Query: 340 EISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 395
E+S +++D+++ PDVVS+ LI YG ++A+ +FE M+ GV P++ ++
Sbjct: 304 EVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYN 360
Query: 396 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMP- 454
+L A + +G+VE+ K +F+SM + RI P + Y M+ A+ ++ A K + +
Sbjct: 361 ILLDAFAISGMVEQAKTVFKSM-RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKV 419
Query: 455 --FEPGPTVWGSLL 466
FEP +G+L+
Sbjct: 420 DGFEPNIVTYGTLI 433
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/325 (20%), Positives = 138/325 (42%), Gaps = 22/325 (6%)
Query: 57 LIQSLCRGG--NHKQAL--EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVD-- 110
L++S RGG N+ +A+ + S PS T ++++++ + F + +V L+D
Sbjct: 187 LMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEK 246
Query: 111 -SGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRAL-AMVGRGEELL 168
S L D + +I MY + G+ + ARKVF + + + +L + +E+
Sbjct: 247 KSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVS 306
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
++Y QM S I D +Y ++KA + ++ + +L G L
Sbjct: 307 KIYDQMQRSDIQPDVVSYALLIKAYGRARRE----EEALSVFEEMLDAGVRPTHKAYNIL 362
Query: 229 LDVYAKFGCISYANSVFRAMPAKNSV----SWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
LD +A G + A +VF++M S++ M+ Y A + F ++ ++
Sbjct: 363 LDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGF 422
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 344
+ PN VT ++ V+ + G+ + ++ ++ GRC
Sbjct: 423 E--PNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSA 480
Query: 345 ERVFDKVKN----PDVVSWNSLISM 365
+ ++++ PD + N L+S+
Sbjct: 481 LGWYKEMESCGVPPDQKAKNVLLSL 505
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 178/417 (42%), Gaps = 22/417 (5%)
Query: 57 LIQSLCRGGNHKQALEVLWSER----NPSHKTI-EVLIQSCAQKSSFSDGRDVHRYLVDS 111
LI SL + +AL++L P +T +V++ C + V+R L+
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLI-R 316
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVGRGEELLELY 171
G D L+N ++G +D A+ +F + I I+N GR ++ +
Sbjct: 317 GFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376
Query: 172 RQMNWS-GIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLD 230
M S GI D TY ++ L E+ ++ G + N++ T L+D
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL----EVLHDMRNKGCKPNVYSYTILVD 432
Query: 231 VYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS 286
+ K G I A +V M A N+V ++ +I + K +A+E+F +M + C
Sbjct: 433 GFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCK- 491
Query: 287 IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGER 346
P+ T S+ + ++ G+ + N LI + R GEI +
Sbjct: 492 -PDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550
Query: 347 VFDKV---KNP-DVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
+ +++ +P D +++NSLI G KA +FE M+ G +PS IS ++
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610
Query: 403 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 459
+G+VEE + F+ + P + + +++ L RA R+++ + + + E P
Sbjct: 611 RSGMVEEA-VEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/373 (19%), Positives = 151/373 (40%), Gaps = 21/373 (5%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS-GLDQ 115
L+ LC+ G A ++ + P LI D + V +V S G+
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 116 DPYLATKLINMYHELGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRGEELLELY 171
D LI Y + G + A +V + R + +Y + +G+ +E +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEF-SVYPLQKGKEIHANILRHGYEENIHVMTTLLD 230
+M+ G+ + + C++S F + + + EI + R G + +++ +L+
Sbjct: 448 NEMSADGLKPNTVGFN-----CLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502
Query: 231 VYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS 286
+ I +A + R M ++ N+V+++ +I + + +A +L ++MV + S
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG--S 560
Query: 287 IPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG----EIS 342
+ +T S+ + +LR G N LI R G +
Sbjct: 561 PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620
Query: 343 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
+ + + PD+V++NSLI+ G + + +F + +G+ P ++F T++
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680
Query: 403 HAGLVEEGKILFE 415
G V + +L +
Sbjct: 681 KGGFVYDACLLLD 693
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/297 (21%), Positives = 125/297 (42%), Gaps = 24/297 (8%)
Query: 110 DSGLDQDPYLATKLINMYHELGSLDCARKVFDET-----RERTIYIWNAFFRALAMVGRG 164
+ G + Y T L++ + +LG +D A V +E + T+ +N A R
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG-FNCLISAFCKEHRI 475
Query: 165 EELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIH 223
E +E++R+M G D +T+ ++ C V E ++ + +++ G N
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE-----IKHALWLLRDMISEGVVANTV 530
Query: 224 VMTTLLDVYAKFGCISYANS-----VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQ 278
TL++ + + G I A VF+ P + ++++++I + KA LF +
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPL-DEITYNSLIKGLCRAGEVDKARSLFEK 589
Query: 279 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 338
M+ + P++++ + ++ RG + N+LI R
Sbjct: 590 MLRDG--HAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRA 647
Query: 339 GEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSY 391
G I G +F K++ PD V++N+L+S G+ A + + I G P++
Sbjct: 648 GRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNH 704
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 103/480 (21%), Positives = 201/480 (41%), Gaps = 43/480 (8%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L+ C G +A+ +++ P T L+ Q + S+ + +V G
Sbjct: 141 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 200
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETR----ERTIYIWNAFFRALAMVGRGEELL 168
D +IN + G D A + ++ E + I++ +L ++ L
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDAL 260
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
L+ +M+ GI D FTY+ ++ C +S + +++L N+ +
Sbjct: 261 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWS-----DASRLLSDMLERKINPNVVTFNS 315
Query: 228 LLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
L+D +AK G + A +F M + N V+++++I + +D +A ++F MV +
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKD 375
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
C +P+ VT ++ + + RRGL LI + + +
Sbjct: 376 C--LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDN 433
Query: 344 GERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
+ VF ++ + P+++++N+L+ NG +KA+ +FE + + P ++ +
Sbjct: 434 AQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSE 493
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEA----IKLIEDMPF 455
AG VE+G LF S LS + P + Y M+ + +EA IK+ ED P
Sbjct: 494 GMCKAGKVEDGWDLFCS-LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL 552
Query: 456 EPGPTVWGSLLGSCRIH-------CNAELAERASAMLFELEPWNAGNYVLLADIYAEAKM 508
P + +L+ R H +AEL + + F +A Y L+ D+ + ++
Sbjct: 553 -PDSGTYNTLI---RAHLRDGDKAASAELIKEMRSCRF---AGDASTYGLVTDMLHDGRL 605
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 162/384 (42%), Gaps = 43/384 (11%)
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRERTIY----IWNAFFRALAMVGRGEELLE 169
D + Y A LIN + G A + D+ I +N A G E LE
Sbjct: 177 DAETYDA--LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 234
Query: 170 LYRQMNWSGIPSDRFTYTYVLKACVVSE-----FSVYPLQKGKEIHANILRHGYEENIHV 224
+ ++M +G+ D T+ VL A S + L KG ++ +
Sbjct: 235 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT---------T 285
Query: 225 MTTLLDVYAKFGCISYANSVFRAMPAKNS------VSWSAMIGCYAKNDMPVKALELFHQ 278
++ +K G S A +F +M K + V++++++ Y+ +F
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 345
Query: 279 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 338
MV E PN V+ ++ V G I + G+ + L+ YGR
Sbjct: 346 MVAEGLK--PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 403
Query: 339 GEISIGERVF----DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISF 394
+ + VF + + P+VV++N+LI YG+NG+ +A++IF M G+ P+ +S
Sbjct: 404 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 463
Query: 395 ITVLCACSHAGLVEEGKILFESMLSKYR---IHPGMEHYACMVDLLGRANRLDEAIKLIE 451
T+L ACS + + K+ +++LS + I+ Y + A L++AI L +
Sbjct: 464 CTLLAACSRS----KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 519
Query: 452 DMPFE--PGPTVWGSLL--GSCRI 471
M + +V ++L GSCR+
Sbjct: 520 SMRKKKVKADSVTFTILISGSCRM 543
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 92/450 (20%), Positives = 169/450 (37%), Gaps = 60/450 (13%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI + R G + A+ ++L + PS T LI +C ++ + +V + + D+G
Sbjct: 184 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 243
Query: 113 LDQD---------------------------------PYLATKLINMY--HELGSLDCAR 137
+ D P T I +Y +LG A
Sbjct: 244 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 303
Query: 138 KVFDETRER------TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
+F+ RE+ + + + ++ G E ++ M G+ + +Y ++
Sbjct: 304 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMG 363
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 251
A V S L + +I ++G ++ T LL+ Y + A VF M +
Sbjct: 364 AYAVHGMSGTALS----VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 252 ----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 307
N V+++A+I Y N +A+E+F QM + PN V++ ++
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK--PNVVSVCTLLAACSRSKKKV 477
Query: 308 XXXXVHGFILRRGLDSIMPVINALITMYGRCGE----ISIGERVFDKVKNPDVVSWNSLI 363
V RG++ N+ I Y E I++ + + K D V++ LI
Sbjct: 478 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 537
Query: 364 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 423
S +AI + M + + + +VLCA S G V E + +F M
Sbjct: 538 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGC 596
Query: 424 HPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
P + Y M+ + + +A +L +M
Sbjct: 597 EPDVIAYTSMLHAYNASEKWGKACELFLEM 626
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 162/384 (42%), Gaps = 43/384 (11%)
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRERTIY----IWNAFFRALAMVGRGEELLE 169
D + Y A LIN + G A + D+ I +N A G E LE
Sbjct: 45 DAETYDA--LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALE 102
Query: 170 LYRQMNWSGIPSDRFTYTYVLKACVVSE-----FSVYPLQKGKEIHANILRHGYEENIHV 224
+ ++M +G+ D T+ VL A S + L KG ++ +
Sbjct: 103 VCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTT---------T 153
Query: 225 MTTLLDVYAKFGCISYANSVFRAMPAKNS------VSWSAMIGCYAKNDMPVKALELFHQ 278
++ +K G S A +F +M K + V++++++ Y+ +F
Sbjct: 154 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 213
Query: 279 MVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRC 338
MV E PN V+ ++ V G I + G+ + L+ YGR
Sbjct: 214 MVAEGLK--PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRS 271
Query: 339 GEISIGERVF----DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISF 394
+ + VF + + P+VV++N+LI YG+NG+ +A++IF M G+ P+ +S
Sbjct: 272 RQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSV 331
Query: 395 ITVLCACSHAGLVEEGKILFESMLSKYR---IHPGMEHYACMVDLLGRANRLDEAIKLIE 451
T+L ACS + + K+ +++LS + I+ Y + A L++AI L +
Sbjct: 332 CTLLAACSRS----KKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQ 387
Query: 452 DMPFE--PGPTVWGSLL--GSCRI 471
M + +V ++L GSCR+
Sbjct: 388 SMRKKKVKADSVTFTILISGSCRM 411
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 95/466 (20%), Positives = 174/466 (37%), Gaps = 63/466 (13%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI + R G + A+ ++L + PS T LI +C ++ + +V + + D+G
Sbjct: 52 LINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNG 111
Query: 113 LDQD---------------------------------PYLATKLINMY--HELGSLDCAR 137
+ D P T I +Y +LG A
Sbjct: 112 VGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL 171
Query: 138 KVFDETRER------TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLK 191
+F+ RE+ + + + ++ G E ++ M G+ + +Y ++
Sbjct: 172 DLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMG 231
Query: 192 ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK 251
A V S L + +I ++G ++ T LL+ Y + A VF M +
Sbjct: 232 AYAVHGMSGTALS----VLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 287
Query: 252 ----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXX 307
N V+++A+I Y N +A+E+F QM + PN V++ ++
Sbjct: 288 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIK--PNVVSVCTLLAACSRSKKKV 345
Query: 308 XXXXVHGFILRRGLDSIMPVINALITMYGRCGE----ISIGERVFDKVKNPDVVSWNSLI 363
V RG++ N+ I Y E I++ + + K D V++ LI
Sbjct: 346 NVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILI 405
Query: 364 SMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRI 423
S +AI + M + + + +VLCA S G V E + +F M
Sbjct: 406 SGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGC 464
Query: 424 HPGMEHYACMVDLLGRANRLDEAIKLIEDMP---FEPGPTVWGSLL 466
P + Y M+ + + +A +L +M EP +L+
Sbjct: 465 EPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALM 510
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 143/326 (43%), Gaps = 27/326 (8%)
Query: 147 TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEF-----SVY 201
T+ NA ++ +G EELL ++R+M +GI +TY +++ V + F V+
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 202 PLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWS 257
+ + I +I+ + T++ Y K G A R M + + +++
Sbjct: 246 EVMESGRIKPDIVTY---------NTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYM 296
Query: 258 AMI-GCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
MI CYA +D + L+ +M + P++ ++V V +
Sbjct: 297 TMIQACYADSDFG-SCVALYQEMDEKGIQVPPHAFSLV--IGGLCKEGKLNEGYTVFENM 353
Query: 317 LRRGLDSIMPVINALITMYGRCGE----ISIGERVFDKVKNPDVVSWNSLISMYGNNGYG 372
+R+G + + LI Y + G I + R+ D+ PDVV+++ +++ NG
Sbjct: 354 IRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRV 413
Query: 373 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 432
++A+ F G++ + + + +++ AG V+E + LFE M K Y
Sbjct: 414 EEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY-CYNA 472
Query: 433 MVDLLGRANRLDEAIKLIEDMPFEPG 458
++D + ++DEAI L + M E G
Sbjct: 473 LIDAFTKHRKVDEAIALFKRMEEEEG 498
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/409 (19%), Positives = 157/409 (38%), Gaps = 56/409 (13%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHK----TIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I+ C+ G ++A+E L H+ T +IQ+C S F +++ + + G
Sbjct: 263 MIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKG 322
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRGEELL 168
+ P+ + +I + G L+ VF+ + + I+ A G E+ +
Sbjct: 323 IQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAI 382
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
L +M G D TY+ V+ + +++ + G N ++L
Sbjct: 383 RLLHRMIDEGFKPDVVTYSVVVNGLCKNG----RVEEALDYFHTCRFDGLAINSMFYSSL 438
Query: 229 LDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQM-VLEA 283
+D K G + A +F M K +S ++A+I + K+ +A+ LF +M E
Sbjct: 439 IDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEG 498
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
CD + T+ +++ + + + +
Sbjct: 499 CDQTVYTYTI---------------------------------LLSGMFKEHRNEEALKL 525
Query: 344 GERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGV--SPSYISFITVLCAC 401
+ + DK P + +L + +G +A +I + + GV + I LC
Sbjct: 526 WDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMINTLC-- 583
Query: 402 SHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLI 450
AG ++E L + + + R PG M++ L + + D A+KL+
Sbjct: 584 -KAGRIKEACKLADGITERGREVPG-RIRTVMINALRKVGKADLAMKLM 630
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/480 (20%), Positives = 189/480 (39%), Gaps = 107/480 (22%)
Query: 56 QLIQSLCRGGNHKQALEVLWSER----NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
+L+++L R +AL V + + P+ T +I Q+ +V+ + +
Sbjct: 167 ELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNE 226
Query: 112 G-LDQDPYLATKLINMYHELGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRGEE 166
G D + LI+ Y +LG D A ++FDE ++ T I+ VG+ E+
Sbjct: 227 GDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEK 286
Query: 167 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMT 226
L+L+ +M +G +TYT ++K + + + ++LR G ++ +
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELIKGLG----KAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 227 TLLDVYAKFGCISYANSVF------RAMPA-----------------------------K 251
L+++ K G + +VF R P
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 252 NSVS-----WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS-VTMVSVXXXXXXXXX 305
+SVS +S +I Y K + KAL L +M + P + ++++
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 306 XXXXXXVHGFILRRGLDSIMPVINA-LITMYGRCGEISIGERVFDKVKN----PDVVSWN 360
L+ ++ + A +I +G+CG++S +F+++KN PDV ++N
Sbjct: 463 ANELFKE----LKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYN 518
Query: 361 SLISM-----------------------------------YGNNGYGKKAIQIFENMIHQ 385
+L+S + G ++AI++FE + H
Sbjct: 519 ALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHS 578
Query: 386 GVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH----YACMVDLLGRAN 441
G+ P +++ T+L +HAG+ EE + M K G E+ Y+ ++D +G +
Sbjct: 579 GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK-----GFEYDAITYSSILDAVGNVD 633
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 12/204 (5%)
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
S ++ + M KAL +F+Q C P S T SV V+ +
Sbjct: 166 SELVKALGRAKMVSKALSVFYQAKGRKCK--PTSSTYNSVILMLMQEGQHEKVHEVYTEM 223
Query: 317 LRRG---LDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNN 369
G D+I +ALI+ Y + G R+FD++K+ P + +L+ +Y
Sbjct: 224 CNEGDCFPDTI--TYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKV 281
Query: 370 GYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
G +KA+ +FE M G SP+ ++ ++ AG V+E ++ ML + + P +
Sbjct: 282 GKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDML-RDGLTPDVVF 340
Query: 430 YACMVDLLGRANRLDEAIKLIEDM 453
++++LG+ R++E + +M
Sbjct: 341 LNNLMNILGKVGRVEELTNVFSEM 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 112/252 (44%), Gaps = 15/252 (5%)
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
+++++SA+I Y K A+ LF +M + C P ++
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMK-DNCMQ-PTEKIYTTLLGIYFKVGKVEKALD 289
Query: 312 VHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF-DKVKN---PDVVSWNSLISMYG 367
+ + R G + LI G+ G + + D +++ PDVV N+L+++ G
Sbjct: 290 LFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILG 349
Query: 368 NNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGL-VEEGKILFESMLSKYRIHPG 426
G ++ +F M +P+ +S+ TV+ A + V E F+ M + + P
Sbjct: 350 KVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD-SVSPS 408
Query: 427 MEHYACMVDLLGRANRLDEAIKLIEDMP---FEPGPTVWGSLLGSCRIHCNAELAERASA 483
Y+ ++D + NR+++A+ L+E+M F P P + SL+ + A+ E A+
Sbjct: 409 EFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINAL---GKAKRYEAANE 465
Query: 484 MLFELEPWNAGN 495
+ EL+ N GN
Sbjct: 466 LFKELKE-NFGN 476
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 130/315 (41%), Gaps = 14/315 (4%)
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
+ ++NA + G+ + EL M G D ++ ++ A + S L
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNL--AV 282
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV----SWSAMIGCY 263
E+ + G + TLL ++ + A VF M A +++AMI Y
Sbjct: 283 ELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVY 342
Query: 264 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 323
+ + +A LF M LE P++VT S+ V+ + + G
Sbjct: 343 GRCGLAAEAERLF--MELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 324 IMPVINALITMYGRCGEISIGERVFDKVK-----NPDVVSWNSLISMYGNNGYGKKAIQI 378
N +I MYG+ G++ + +++ +K NPD +++ LI G +A +
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAAL 460
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
M+ G+ P+ ++ ++C + AG EE + F ML + P Y+ M+D+L
Sbjct: 461 MSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCML-RSGTKPDNLAYSVMLDVLL 519
Query: 439 RANRLDEAIKLIEDM 453
R N +A L DM
Sbjct: 520 RGNETRKAWGLYRDM 534
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 117/284 (41%), Gaps = 46/284 (16%)
Query: 214 LRHGYEENIHVMTTLLDVYAKFGCISYANSVF-RAMP--AKNSVSWSAMIGCYAKNDMPV 270
LRH + N ++ +L V ++ S A +F RA P ++AM+G Y+++
Sbjct: 183 LRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFS 242
Query: 271 KALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRG---------- 320
KA EL M C +P+ ++ ++ V + R
Sbjct: 243 KAQELVDAMRQRGC--VPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITY 300
Query: 321 ------------LDSIMPVI---------------NALITMYGRCGEISIGERVFDKVK- 352
LD + V NA+I++YGRCG + ER+F +++
Sbjct: 301 NTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL 360
Query: 353 ---NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE 409
PD V++NSL+ + +K ++++ M G +++ T++ G ++
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDL 420
Query: 410 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
L++ M +P Y ++D LG+ANR EA L+ +M
Sbjct: 421 ALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 90/209 (43%), Gaps = 15/209 (7%)
Query: 326 PVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFEN 381
P+ +I YG+ E V ++ PD+ +WNSL+S Y G ++A IF
Sbjct: 753 PMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNT 812
Query: 382 MIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRAN 441
M+ G SP+ S +L A G +EE ++ E L M+D RA
Sbjct: 813 MMRDGPSPTVESINILLHALCVDGRLEELYVVVEE-LQDMGFKISKSSILLMLDAFARAG 871
Query: 442 RLDEAIKLIEDMP---FEPGPTVWGSLLGSCRIHCNAELAERASAMLFELEPWNAGNYVL 498
+ E K+ M + P ++ ++ + C + A M+ E+E N V
Sbjct: 872 NIFEVKKIYSSMKAAGYLPTIRLYRMMI---ELLCKGKRVRDAEIMVSEMEEANFK--VE 926
Query: 499 LADIYAEAKMWSDVKSVRKLMGKRVLQKV 527
LA + KM++ ++ +K + +V Q++
Sbjct: 927 LAIWNSMLKMYTAIEDYKKTV--QVYQRI 953
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 155/380 (40%), Gaps = 62/380 (16%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRY------LVD 110
LI +LC A EV + HK V + + FSD RD+ +
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDR--FSDNRDLDSVKQFWSEMEK 356
Query: 111 SGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTI----YIWNAFFRALAMVGRGEE 166
G D T L++ + G+ A D R++ I + +N L V R ++
Sbjct: 357 DGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDD 416
Query: 167 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMT 226
LEL+ M G+ +TY + S SV L+ +++ G NI
Sbjct: 417 ALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKT----KGIAPNIVACN 472
Query: 227 TLLDVYAKFGCISYANSVFRAMP----AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLE 282
L AK G A +F + +SV+++ M+ CY+K +A++L +M+
Sbjct: 473 ASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Query: 283 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 342
C+ P+ + V+N+LI + +
Sbjct: 533 GCE--PDVI-----------------------------------VVNSLINTLYKADRVD 555
Query: 343 IGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 398
++F ++K P VV++N+L++ G NG ++AI++FE M+ +G P+ I+F T+
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 399 -CACSHAGLVEEGKILFESM 417
C C + + K+LF+ M
Sbjct: 616 DCLCKNDEVTLALKMLFKMM 635
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/443 (20%), Positives = 174/443 (39%), Gaps = 47/443 (10%)
Query: 58 IQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGL 113
+ SL + G ++A ++ + ++ P T ++++ ++ + + ++++G
Sbjct: 475 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGC 534
Query: 114 DQDPYLATKLINMYHELGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRGEELLE 169
+ D + LIN ++ +D A K+F +E T+ +N L G+ +E +E
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594
Query: 170 LYRQMNWSGIPSDRFTY-------------TYVLK--------ACVVSEFS----VYPLQ 204
L+ M G P + T+ T LK CV F+ ++ L
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 654
Query: 205 KGKEI-HANILRHGYEENIH----VMTTLLDVYAKFGCISYA-----NSVFRAMPAKNSV 254
K ++ A H ++ ++ + TLL K I A N ++ ++
Sbjct: 655 KNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANL 714
Query: 255 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 314
W +IG A+ ++V +S+ + +
Sbjct: 715 FWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEK 774
Query: 315 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNG 370
F G+ +P N LI I I + VF +VK+ PDV ++N L+ YG +G
Sbjct: 775 FTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSG 834
Query: 371 YGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHY 430
+ ++++ M + I+ V+ AG V++ L+ ++S P Y
Sbjct: 835 KIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTY 894
Query: 431 ACMVDLLGRANRLDEAIKLIEDM 453
++D L ++ RL EA +L E M
Sbjct: 895 GPLIDGLSKSGRLYEAKQLFEGM 917
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 155/391 (39%), Gaps = 29/391 (7%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T + I+ + ++ ++ + + D G D T LI+ LDCA++V
Sbjct: 256 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 315
Query: 140 FDETR------ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA- 192
F++ + +R YI + + + + + +M G D T+T ++ A
Sbjct: 316 FEKMKTGRHKPDRVTYI--TLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDAL 373
Query: 193 CVVSEFSVYPLQKGKEIHA-NILR-HGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA 250
C F G+ +++R G N+H TL+ + + A +F M +
Sbjct: 374 CKAGNF-------GEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMES 426
Query: 251 ----KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 306
+ ++ I Y K+ V ALE F +M + PN V +
Sbjct: 427 LGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI--APNIVACNASLYSLAKAGRD 484
Query: 307 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSL 362
+ + GL N ++ Y + GEI ++ ++ PDV+ NSL
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 363 ISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYR 422
I+ +A ++F M + P+ +++ T+L G ++E LFE M+ K
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK-G 603
Query: 423 IHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
P + + D L + + + A+K++ M
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/275 (18%), Positives = 113/275 (41%), Gaps = 12/275 (4%)
Query: 203 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPA----KNSVSWSA 258
++ +++ + G ++ LLD Y K G I +++ M N+++ +
Sbjct: 801 IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNI 860
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
+I K AL+L++ ++ + D P + T + + +L
Sbjct: 861 VISGLVKAGNVDDALDLYYDLMSDR-DFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLD 919
Query: 319 RGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKK 374
G + N LI +G+ GE +F ++ PD+ +++ L+ G +
Sbjct: 920 YGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979
Query: 375 AIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMV 434
+ F+ + G++P + + ++ + +EE +LF M + I P + Y ++
Sbjct: 980 GLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLI 1039
Query: 435 DLLGRANRLDEAIKL---IEDMPFEPGPTVWGSLL 466
LG A ++EA K+ I+ EP + +L+
Sbjct: 1040 LNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALI 1074
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 186/417 (44%), Gaps = 31/417 (7%)
Query: 123 LINMYHELGSLDCARKVF-DETRER---TIYIWNAFFRALAMVGRGEELLELYRQMNWSG 178
L N ++ +D A +F D + R +I +N A+A + + E ++ L QM G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 179 IPSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC 237
I D +TY+ + C S+ S+ + A +++ GYE +I +++LL+ Y
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSL-----ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 238 ISYANSVFRAMP----AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTM 293
IS A ++ M ++ +++ +I ++ +A+ L QMV C P+ VT
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ--PDLVTY 226
Query: 294 VSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN 353
+V + + + +++ + + N +I + + +F ++ N
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 354 ----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE 409
PDV +++SLIS N G A ++ +MI + ++P+ ++F ++ A G + E
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 410 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLL 466
+ L++ M+ K I P + Y+ +++ +RLDEA + E M + P + +L+
Sbjct: 347 AEKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLI 405
Query: 467 GSCRIHCNAELAERASAMLFELEP----WNAGNYVLLADIYAEAKMWSDVKSVRKLM 519
+ C A+ E + E+ N Y L + +A+ + + V K M
Sbjct: 406 ---KGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/393 (20%), Positives = 161/393 (40%), Gaps = 22/393 (5%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T LI + S+ + +V G D ++N + G +D A +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 140 FDETR----ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CV 194
+ E + I+N L ++ L L+ +M+ GI D FTY+ ++ C
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 195 VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK--- 251
+S + ++++ N+ + L+D + K G + A ++ M +
Sbjct: 306 YGRWS-----DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 360
Query: 252 -NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 310
+ ++S++I + +D +A +F M+ + C PN VT ++
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC--FPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 311 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMY 366
+ + +RGL LI + + + + VF ++ + P+++++N L+
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGL 478
Query: 367 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 426
NG KA+ +FE + + P ++ ++ AG VE+G LF + LS + P
Sbjct: 479 CKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCN-LSLKGVSPN 537
Query: 427 MEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 459
+ Y M+ R +EA L++ M E GP
Sbjct: 538 VIAYNTMISGFCRKGSKEEADSLLKKMK-EDGP 569
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 104/254 (40%), Gaps = 21/254 (8%)
Query: 57 LIQSLCRGGNHKQALEVLWS--ER--NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI LC G A +L ER NP+ T LI + ++ + ++ ++
Sbjct: 299 LISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 358
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRGEELL 168
+D D + + LIN + LD A+ +F+ + + ++ + R EE +
Sbjct: 359 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGM 418
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
EL+R+M+ G+ + TYT ++ F + + ++ G NI L
Sbjct: 419 ELFREMSQRGLVGNTVTYTTLIHGF----FQARDCDNAQMVFKQMVSVGVHPNILTYNIL 474
Query: 229 LDVYAKFGCISYANSVF----RAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
LD K G ++ A VF R+ + +++ MI K ELF + L+
Sbjct: 475 LDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV 534
Query: 285 DSIPNSV---TMVS 295
PN + TM+S
Sbjct: 535 S--PNVIAYNTMIS 546
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 183/423 (43%), Gaps = 28/423 (6%)
Query: 123 LINMYHELGSLDCARKVF-DETRER---TIYIWNAFFRALAMVGRGEELLELYRQMNWSG 178
L N ++ +D A +F D + R +I +N A+A + + E ++ L QM G
Sbjct: 54 LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113
Query: 179 IPSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGC 237
I D +TY+ + C S+ S+ + A +++ GYE +I +++LL+ Y
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSL-----ALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKR 168
Query: 238 ISYANSVFRAMP----AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTM 293
IS A ++ M ++ +++ +I ++ +A+ L QMV C P+ VT
Sbjct: 169 ISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQ--PDLVTY 226
Query: 294 VSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN 353
+V + + + + + + N +I + + + +F +++
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 354 ----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEE 409
P+VV++NSLI+ N G A ++ NM+ + ++P+ ++F ++ A G + E
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 410 GKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLL 466
+ L E M+ + I P Y +++ NRLDEA ++ + M + P + +L+
Sbjct: 347 AEKLHEEMIQR-SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLI 405
Query: 467 GSCRIHCNAELAERASAMLFELEPWN-AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQ 525
C + E + E+ GN V I D S + + + V
Sbjct: 406 NG---FCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 526 KVP 528
+VP
Sbjct: 463 RVP 465
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 149/353 (42%), Gaps = 24/353 (6%)
Query: 119 LATKLINMYHELGSLDCARKVFDETRE----RTIYIWNAFFRALAMVGRGEELLELYRQM 174
LA+ +I+ G + A+++F+ T+Y ++A A G EE + ++ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 175 NWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAK 234
G+ + TY V+ AC + K + R+G + + +LL V ++
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAK---FFDEMQRNGVQPDRITFNSLLAVCSR 351
Query: 235 FGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNS 290
G A ++F M + + S++ ++ K A E+ QM ++ +PN
Sbjct: 352 GGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRI--MPNV 409
Query: 291 VTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK 350
V+ +V + G + G+ N L+++Y + G E D
Sbjct: 410 VSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGR---SEEALDI 466
Query: 351 VK-------NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSH 403
++ DVV++N+L+ YG G + ++F M + V P+ +++ T++ S
Sbjct: 467 LREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSK 526
Query: 404 AGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE 456
GL +E +F S + + Y+ ++D L + + A+ LI++M E
Sbjct: 527 GGLYKEAMEIFREFKSA-GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE 578
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/406 (19%), Positives = 159/406 (39%), Gaps = 58/406 (14%)
Query: 57 LIQSLCRGGNHKQALEVLWSE--RN---PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
+I + +GG + + + E RN P T L+ C++ + R++ + +
Sbjct: 309 VIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNR 368
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIY----IWNAFFRALAMVGRGEEL 167
++QD + L++ + G +D A ++ + + I ++ A GR +E
Sbjct: 369 RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEA 428
Query: 168 LELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRH----GYEENIH 223
L L+ +M + GI DR +Y +L S+Y E +ILR G ++++
Sbjct: 429 LNLFGEMRYLGIALDRVSYNTLL--------SIYTKVGRSEEALDILREMASVGIKKDVV 480
Query: 224 VMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQM 279
LL Y K G VF M + N +++S +I Y+K + +A+E+F +
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFRE- 539
Query: 280 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 339
++ + V ++ + + + G+ + N++I +GR
Sbjct: 540 -FKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSA 598
Query: 340 EISIGERVFDKVKNPDV------------VSWNSLISMYG------NNGYGKKA------ 375
+ +R D + N +I ++G NN K
Sbjct: 599 TM---DRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQE 655
Query: 376 ----IQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESM 417
+++F M + P+ ++F +L ACS E+ +L E +
Sbjct: 656 LSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLEEL 701
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 160/423 (37%), Gaps = 78/423 (18%)
Query: 57 LIQSLCRGGNHKQALEVL-WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQ 115
+I C+ G AL VL +P T +++S +V ++
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYP 237
Query: 116 DPYLATKLINMYHELGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRGEELLELY 171
D T LI + A K+ DE R+R + +N + GR +E ++
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
M SG + T+ +L+ S S +++ A++LR G+ ++ L++
Sbjct: 298 NDMPSSGCQPNVITHNIILR----SMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINF 353
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSV 291
+ G + A + MP GC PNS+
Sbjct: 354 LCRKGLLGRAIDILEKMPQH---------GCQ------------------------PNSL 380
Query: 292 TMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKV 351
+ + +HGF + +D + + ER+ +
Sbjct: 381 SYNPL---------------LHGFCKEKKMDRAIEYL----------------ERMVSRG 409
Query: 352 KNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGK 411
PD+V++N++++ +G + A++I + +G SP I++ TV+ + AG +
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 412 ILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL---IEDMPFEPGPTVWGS-LLG 467
L + M +K + P Y+ +V L R ++DEAIK E M P + S +LG
Sbjct: 470 KLLDEMRAK-DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 468 SCR 470
C+
Sbjct: 529 LCK 531
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 120/282 (42%), Gaps = 22/282 (7%)
Query: 203 LQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV----SWSA 258
L++G + N++ HG +I TTL+ + + G A + + +V +++
Sbjct: 118 LEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNV 177
Query: 259 MIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILR 318
MI Y K AL + +M + P+ VT ++ V +L+
Sbjct: 178 MISGYCKAGEINNALSVLDRMSVS-----PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ 232
Query: 319 RGLDSIMPVINALITMYGRCGEISIGE--RVFDKVKN----PDVVSWNSLISMYGNNGYG 372
R D VI I + C + +G ++ D++++ PDVV++N L++ G
Sbjct: 233 R--DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 373 KKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYAC 432
+AI+ +M G P+ I+ +L + G + + L ML K P + +
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNI 349
Query: 433 MVDLLGRANRLDEAIKLIEDMP---FEPGPTVWGSLL-GSCR 470
+++ L R L AI ++E MP +P + LL G C+
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 182/435 (41%), Gaps = 71/435 (16%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L+ C G +A+ ++ ++ P T+ LI K S+ + +V+ G
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYI----WNAFFRALAMVGRGEELL 168
D ++N + G+ A +F + ER I ++ +L G ++ L
Sbjct: 206 FQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDAL 265
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK-EIHANILRHGYEENI----H 223
L+ +M GI +D TY+ ++ GK + A +LR NI
Sbjct: 266 SLFNEMEMKGIKADVVTYSSLIGGLC---------NDGKWDDGAKMLREMIGRNIIPDVV 316
Query: 224 VMTTLLDVYAKFGCISYANSVFRAM----PAKNSVSWSAMIGCYAKNDMPVKALELFHQM 279
+ L+DV+ K G + A ++ M A ++++++++I + K + +A ++F M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 280 VLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCG 339
V + C+ P+ VT + LI Y +
Sbjct: 377 VSKGCE--PDIVTY-----------------------------------SILINSYCKAK 399
Query: 340 EISIGERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFI 395
+ G R+F ++ + P+ +++N+L+ + +G A ++F+ M+ +GV PS +++
Sbjct: 400 RVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYG 459
Query: 396 TVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL---IED 452
+L G + + +FE M K R+ G+ Y ++ + A+++D+A L + D
Sbjct: 460 ILLDGLCDNGELNKALEIFEKM-QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518
Query: 453 MPFEPGPTVWGSLLG 467
+P + ++G
Sbjct: 519 KGVKPDVVTYNVMIG 533
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/377 (20%), Positives = 153/377 (40%), Gaps = 60/377 (15%)
Query: 111 SGLDQDPYLATKLINMYHELGSLDCARKVFDET----RERTIYIWNAFFRALAMVGRGEE 166
+G++ D Y T +IN Y L A V E ++ + GR E
Sbjct: 99 NGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 167 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANIL-----RHGYEEN 221
+ L +M D T + ++ + KG+ A +L +G++ +
Sbjct: 159 AVALVDRMVEMKQRPDLVTVSTLINGLCL---------KGRVSEALVLIDRMVEYGFQPD 209
Query: 222 IHVMTTLLDVYAKFGCISYANSVFRAMPAKN----SVSWSAMIGCYAKNDMPVKALELFH 277
+L+ K G + A +FR M +N V +S +I K+ AL LF+
Sbjct: 210 EVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFN 269
Query: 278 QMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGR 337
+M ++ + + VT S+ + G D ++ +I
Sbjct: 270 EMEMKGIKA--DVVTYSSL---------------IGGLCNDGKWDDGAKMLREMI----- 307
Query: 338 CGEISIGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
G + PDVV++++LI ++ G +A +++ MI +G++P I++ ++
Sbjct: 308 ------GRNII-----PDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 398 LCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE- 456
+ + E +F+ M+SK P + Y+ +++ +A R+D+ ++L ++ +
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSK-GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 457 --PGPTVWGSL-LGSCR 470
P + +L LG C+
Sbjct: 416 LIPNTITYNTLVLGFCQ 432
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 172/404 (42%), Gaps = 31/404 (7%)
Query: 87 VLIQSCAQK--SSFSDGRDVHRYLVDSGLDQDPY-LATKLINMYHELGSLDCARKVFDET 143
+L+Q + K S F + YL +S + + L +IN Y + SL+ + F+E
Sbjct: 61 LLLQVISGKIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEM 120
Query: 144 RERTIYIWNAFFRALAMVGRGEELLEL---YRQMNWSGIPSDRFTYTYVLKACVVSEFSV 200
+ + F L G + N S + D +++ ++K C
Sbjct: 121 VDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCC----EA 176
Query: 201 YPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP----AKNSVSW 256
++K ++ + G+ N+ + TTL+D K G I A +F M N ++
Sbjct: 177 GEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTY 236
Query: 257 SAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFI 316
+ +I KN + + E++ +M + PN T V V +
Sbjct: 237 TVLINGLFKNGVKKQGFEMYEKMQEDGV--FPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 317 LRRGLDSIMPVINALITMYGRCGEISIGE--RVFDKVK----NPDVVSWNSLISMYGNNG 370
RG+ + N LI G C E+ + E +V D++K NP+++++N+LI + G
Sbjct: 295 RERGVSCNIVTYNTLIG--GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVG 352
Query: 371 YGKKAIQIFENMIHQGVSPSYISF-ITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
KA+ + ++ +G+SPS +++ I V C K++ E + + I P
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE--MEERGIKPSKVT 410
Query: 430 YACMVDLLGRANRLDEAIKL---IEDMPFEPGPTVWGSLL-GSC 469
Y ++D R++ +++AI+L +E++ P + L+ G C
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 166/400 (41%), Gaps = 62/400 (15%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI C+ G ++A ++ + + +T VLI + G +++ + + G
Sbjct: 204 LIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDG 263
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRGEELL 168
+ + Y ++N + G A +VFDE RER I +N L + E
Sbjct: 264 VFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEAN 323
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
++ QM GI + TY ++ C V + L K + ++ G ++
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGK-----LGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 228 LLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
L+ + + G S A + + M + + V+++ +I +A++D KA++L ++ +E
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQL--RLSMEE 436
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
+P+ V SV +HGF ++ ++ + +++
Sbjct: 437 LGLVPD-VHTYSV--------------LIHGFCIKGQMNEASRLFKSMV----------- 470
Query: 344 GERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP---SYISFITVLCA 400
+K P+ V +N++I Y G +A+++ + M + ++P SY I VLC
Sbjct: 471 -----EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCK 525
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRA 440
+ +E + L E M I G++ ++ L+ RA
Sbjct: 526 ERKS---KEAERLVEKM-----IDSGIDPSTSILSLISRA 557
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 131/314 (41%), Gaps = 15/314 (4%)
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGK 207
+ I+ G E+ +L+ +M G+ ++ TYT ++ F ++G
Sbjct: 198 VVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGL----FKNGVKKQGF 253
Query: 208 EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCY 263
E++ + G N++ +++ K G A VF M + N V+++ +IG
Sbjct: 254 EMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGL 313
Query: 264 AKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDS 323
+ +A ++ QM + + PN +T ++ + + RGL
Sbjct: 314 CREMKLNEANKVVDQMKSDGIN--PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 324 IMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIF 379
+ N L++ + R G+ S ++ +++ P V++ LI + + +KAIQ+
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 380 ENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGR 439
+M G+ P ++ ++ G + E LF+SM+ K P Y M+ +
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK-NCEPNEVIYNTMILGYCK 490
Query: 440 ANRLDEAIKLIEDM 453
A+KL+++M
Sbjct: 491 EGSSYRALKLLKEM 504
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/384 (19%), Positives = 154/384 (40%), Gaps = 29/384 (7%)
Query: 87 VLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDE---- 142
+LI+ C + D+ L + G + + T LI+ + G ++ A+ +F E
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 143 ---TRERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFS 199
ERT + L G ++ E+Y +M G+ + +TY CV+++
Sbjct: 228 GLVANERT---YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYN-----CVMNQLC 279
Query: 200 VYPLQKGK-EIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSV 254
K ++ + G NI TL+ + ++ AN V M + N +
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339
Query: 255 SWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHG 314
+++ +I + KAL L L++ P+ VT + +
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRD--LKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 315 FILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMYGNNG 370
+ RG+ LI + R + ++ ++ PDV +++ LI + G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 371 YGKKAIQIFENMIHQGVSPSYISFIT-VLCACSHAGLVEEGKILFESMLSKYRIHPGMEH 429
+A ++F++M+ + P+ + + T +L C K+L E + + + P +
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE--MEEKELAPNVAS 515
Query: 430 YACMVDLLGRANRLDEAIKLIEDM 453
Y M+++L + + EA +L+E M
Sbjct: 516 YRYMIEVLCKERKSKEAERLVEKM 539
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 167/417 (40%), Gaps = 54/417 (12%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L+ C G +A+ +++ P T L+ Q + S+ + +V G
Sbjct: 151 LLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKG 210
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETR----ERTIYIWNAFFRALAMVGRGEELL 168
D +IN + G D A + ++ E + I+N L ++
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAF 270
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
+L+ +M GI D FTY ++ C +S + +++L ++
Sbjct: 271 DLFNKMETKGIKPDVFTYNPLISCLCNYGRWS-----DASRLLSDMLEKNINPDLVFFNA 325
Query: 228 LLDVYAKFGCISYANSVFRAMPAK-----NSVSWSAMIGCYAKNDMPVKALELFHQMVLE 282
L+D + K G + A ++ M + V+++ +I + K + +E+F +M
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 283 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 342
+ N+VT ++ +HGF R D+ V +++
Sbjct: 386 GL--VGNTVTYTTL---------------IHGFFQARDCDNAQMVFKQMVS--------- 419
Query: 343 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
D V +PD++++N L+ NNG + A+ +FE M + + +++ T++ A
Sbjct: 420 ------DGV-HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 403 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 459
AG VE+G LF S LS + P + Y M+ R +EA L +M E GP
Sbjct: 473 KAGKVEDGWDLFCS-LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK-EDGP 527
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/334 (20%), Positives = 154/334 (46%), Gaps = 20/334 (5%)
Query: 133 LDCARKVF-DETRER---TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYT- 187
LD A +F D + R +I ++ A+A + + + ++ L QM GI + +TY+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 188 YVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 247
++ C S+ S+ GK +++ GY +I + +LL+ + IS A ++
Sbjct: 116 FINYFCRRSQLSLALAILGK-----MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQ 170
Query: 248 MP----AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 303
M ++V+++ ++ +++ +A+ L +MV++ C P+ VT +V
Sbjct: 171 MVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQ--PDLVTYGAVINGLCKR 228
Query: 304 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSW 359
+ + + +++ + + N +I + + +F+K++ PDV ++
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTY 288
Query: 360 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 419
N LIS N G A ++ +M+ + ++P + F ++ A G + E + L++ M+
Sbjct: 289 NPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK 348
Query: 420 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
P + Y ++ + R++E +++ +M
Sbjct: 349 SKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 174/431 (40%), Gaps = 28/431 (6%)
Query: 62 CRGGNHKQALEVLWS----ERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDP 117
CR GN+ ++L +L + NP LI+ + V L G D
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 118 YLATKLINMYHELGSLDCARKVFDETRERTI----YIWNAFFRALAMVGRGEELLELYRQ 173
+ LIN + ++ +D A +V D R + +N +L G+ + L++ Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 174 MNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYA 233
+ TYT +++A ++ + + ++ +L G + ++ T++
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEG----GVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 234 KFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPN 289
K G + A + R + K + +S++ ++ + +L +M E CD PN
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD--PN 332
Query: 290 SVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFD 349
VT + + + +GL + LI + R G + + +
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392
Query: 350 KVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAG 405
+ + PD+V++N++++ NG +A++IF + G SP+ S+ T+ A +G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 406 LVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM---PFEPGPTVW 462
+ M+S I P Y M+ L R +DEA +L+ DM F P +
Sbjct: 453 DKIRALHMILEMMSN-GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTY 511
Query: 463 G-SLLGSCRIH 472
LLG C+ H
Sbjct: 512 NIVLLGFCKAH 522
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/413 (19%), Positives = 158/413 (38%), Gaps = 23/413 (5%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI C+ A VL R+ P T ++I S + V L+
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTI----YIWNAFFRALAMVGRGEELL 168
T LI G +D A K+ DE R + + +N R + G +
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
E+ R + G D +Y +L+A + + ++G+++ + + N+ + L
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALL----NQGKWEEGEKLMTKMFSEKCDPNVVTYSIL 339
Query: 229 LDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
+ + G I A ++ + M K ++ S+ +I + + A+E M+ + C
Sbjct: 340 ITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC 399
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGE-ISI 343
+P+ V +V + G + G N + + G+ I
Sbjct: 400 --LPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 344 GERVFDKVKN---PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
+ + + N PD +++NS+IS G +A ++ +M PS +++ VL
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
A +E+ + ESM+ P Y +++ +G A EA++L D+
Sbjct: 518 FCKAHRIEDAINVLESMVGN-GCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/417 (19%), Positives = 171/417 (41%), Gaps = 51/417 (12%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T ++I ++ R + + GL D +I+ + ++G LD
Sbjct: 260 PTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCF 319
Query: 140 FDETR----ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVV 195
F+E + E + +NA G+ LE YR+M +G+ + +Y+ ++ A
Sbjct: 320 FEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCK 379
Query: 196 SEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA----NSVFRAMPAK 251
+Q+ + + ++ R G N + T+L+D K G +S A N + +
Sbjct: 380 EGM----MQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 435
Query: 252 NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXX 311
N V+++A+I + +A ELF +M + IPN + ++
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKM--DTAGVIPNLASYNAL--------------- 478
Query: 312 VHGFILRRGLDSIMPVINAL-------------ITMYGRCG--EISIGERVFDKVKNPDV 356
+HGF+ + +D + ++N L ++G C +I + V +++K +
Sbjct: 479 IHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 357 VS----WNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKI 412
+ + +L+ Y +G + + + + M + + ++F ++ LV +
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 413 LFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM---PFEPGPTVWGSLL 466
F + + + + + M+D L + N+++ A L E M P T + SL+
Sbjct: 599 YFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLM 655
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 163/387 (42%), Gaps = 21/387 (5%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P +T+ L+ + F ++ +V G+ D Y+ T +I EL L A+++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 140 FDETR----ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTY-TYVLKACV 194
+ I +N L + E + + + + + D TY T V C
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 195 VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA-NSVFRAMP---A 250
V EF + G E+ +L + + +++L++ K G I A N V R + +
Sbjct: 310 VQEFEI-----GLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVS 364
Query: 251 KNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 310
N ++A+I K +A LF +M PN VT +
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRM--GKIGLRPNDVTYSILIDMFCRRGKLDTAL 422
Query: 311 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGE----RVFDKVKNPDVVSWNSLISMY 366
G ++ GL + N+LI + + G+IS E + +K P VV++ SL+ Y
Sbjct: 423 SFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGY 482
Query: 367 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 426
+ G KA++++ M +G++PS +F T+L AGL+ + LF M +++ + P
Sbjct: 483 CSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPN 541
Query: 427 MEHYACMVDLLGRANRLDEAIKLIEDM 453
Y M++ + +A + +++M
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 158/383 (41%), Gaps = 28/383 (7%)
Query: 57 LIQSLCRGGNHKQALEVL-----WSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
L+ L R G + A+++ W+ + P+ T V+I+ ++ S + + + +
Sbjct: 513 LLSGLFRAGLIRDAVKLFNEMAEWNVK-PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYI----WNAFFRALAMVGRGEEL 167
G+ D Y LI+ G A+ D + + + G+ EE
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 168 LELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
L + ++M G+ D Y ++ + + KE+H G + + + T+
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHD----RGLKPDDVIYTS 687
Query: 228 LLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
++D +K G A ++ M + N V+++A+I K +A L +M +
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM--QP 745
Query: 284 CDSIPNSVTM-VSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 342
S+PN VT + +H IL+ GL + N LI + R G I
Sbjct: 746 VSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIE 804
Query: 343 -----IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITV 397
I + D V +PD +++ ++I+ KKAI+++ +M +G+ P +++ T+
Sbjct: 805 EASELITRMIGDGV-SPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Query: 398 LCACSHAGLVEEGKILFESMLSK 420
+ C AG + + L ML +
Sbjct: 864 IHGCCVAGEMGKATELRNEMLRQ 886
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 143/316 (45%), Gaps = 17/316 (5%)
Query: 217 GYEENIHVMTTL---LDVYAKFGCIS-YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 272
G++ + H TT+ L +FG I+ + + R N+V+++ +I Y + + +A
Sbjct: 354 GFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEA 413
Query: 273 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALI 332
+ +F+QM C+ P+ VT ++ ++ + GL + +I
Sbjct: 414 MNVFNQMQEAGCE--PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 333 TMYGRCGEISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 388
G+ G + R+F ++ P++V++N +I+++ + A++++ +M + G
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 389 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 448
P +++ V+ H G +EE + +F M K + P Y +VDL G+A +D+A +
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWV-PDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 449 LIEDM---PFEPGPTVWGSLLGS-CRIHCNAELAERASAML-FELEPWNAGNYVLLADIY 503
+ M P SLL + R+H +E +ML L P + Y LL
Sbjct: 591 WYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHP-SLQTYTLLLSCC 649
Query: 504 AEAKMWSDVKSVRKLM 519
+A+ D+ +LM
Sbjct: 650 TDARSNFDMGFCGQLM 665
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 87/201 (43%), Gaps = 12/201 (5%)
Query: 56 QLIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
+LI S R K+A+ V + P T LI A+ D+++ + ++
Sbjct: 399 RLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA 458
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRGEEL 167
GL D + + +IN + G L A ++F E + + +N A E
Sbjct: 459 GLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETA 518
Query: 168 LELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
L+LYR M +G D+ TY+ V++ F L++ + + A + R + + V
Sbjct: 519 LKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF----LEEAEGVFAEMQRKNWVPDEPVYGL 574
Query: 228 LLDVYAKFGCISYANSVFRAM 248
L+D++ K G + A ++AM
Sbjct: 575 LVDLWGKAGNVDKAWQWYQAM 595
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 166/355 (46%), Gaps = 25/355 (7%)
Query: 133 LDCARKVFDE-TRER---TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTY 188
LD A +F E + R +I ++ A+A + + + ++ L QM GIP + +TY+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 189 VLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA----NS 243
++ C S+ + GK +++ GYE NI +++LL+ Y IS A +
Sbjct: 122 LINCFCRRSQLPLALAVLGK-----MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQ 176
Query: 244 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 303
+F N+V+++ +I ++ +A+ L +MV + C P+ VT V
Sbjct: 177 MFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQ--PDLVTYGVVVNGLCKR 234
Query: 304 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSW 359
+ + + L+ + + N +I + + +F +++ P+VV++
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTY 294
Query: 360 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 419
+SLIS N G A ++ +MI + ++P +F ++ A G + E + L++ M+
Sbjct: 295 SSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV- 353
Query: 420 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLL-GSCR 470
K I P + Y+ +++ +RLDEA ++ E M + P + +L+ G C+
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCK 408
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 165/387 (42%), Gaps = 21/387 (5%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P+ T LI + S+ + +V G D ++N + G D A +
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 140 FDETR----ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CV 194
++ E + I+N L ++ L L+++M GI + TY+ ++ C
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 195 VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNS- 253
+S + ++++ ++ + L+D + K G + A ++ M ++
Sbjct: 304 YGRWS-----DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSID 358
Query: 254 ---VSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXX 310
V++S++I + +D +A ++F MV + C P+ VT ++
Sbjct: 359 PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC--FPDVVTYNTLIKGFCKYKRVEEGM 416
Query: 311 XVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSWNSLISMY 366
V + +RGL N LI + G+ + + +F ++ + P+++++N+L+
Sbjct: 417 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 476
Query: 367 GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPG 426
NG +KA+ +FE + + P+ ++ ++ AG VE+G LF + LS + P
Sbjct: 477 CKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN-LSLKGVKPD 535
Query: 427 MEHYACMVDLLGRANRLDEAIKLIEDM 453
+ Y M+ R +EA L ++M
Sbjct: 536 VVAYNTMISGFCRKGSKEEADALFKEM 562
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/430 (20%), Positives = 176/430 (40%), Gaps = 28/430 (6%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L+ C G +A+ ++ E P+ T LI + S+ + +V G
Sbjct: 156 LLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARG 215
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETR----ERTIYIWNAFFRALAMVGRGEELL 168
D + ++N + G +D A + + E + I+ AL + L
Sbjct: 216 CQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDAL 275
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
L+ +M+ GI + TY +++ C +S + ++++ N+ +
Sbjct: 276 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS-----DASRLLSDMIERKINPNVVTFSA 330
Query: 228 LLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
L+D + K G + A ++ M + + ++S++I + +D +A +F M+ +
Sbjct: 331 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 390
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
C PN VT ++ + + +RGL N LI + G+ +
Sbjct: 391 C--FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448
Query: 344 GERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
+++F K+ + PD+++++ L+ G +KA+ +FE + + P ++ ++
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE--- 456
AG VE+G LF S LS + P + Y M+ R +EA L +M +
Sbjct: 509 GMCKAGKVEDGWDLFCS-LSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 457 PGPTVWGSLL 466
P + +L+
Sbjct: 568 PNSGTYNTLI 577
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/413 (21%), Positives = 177/413 (42%), Gaps = 28/413 (6%)
Query: 133 LDCARKVFDETRER----TIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTY 188
LD A +F E + +I +N A+A + + + ++ L +M I D ++Y
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 189 VLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYA----NS 243
++ C S+ + GK +++ GYE +I +++LL+ Y IS A +
Sbjct: 121 LINCFCRRSQLPLALAVLGK-----MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 244 VFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXX 303
+F N+V+++ +I ++ +A+ L +MV C P+ T +V
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ--PDLFTYGTVVNGLCKR 233
Query: 304 XXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN----PDVVSW 359
+ + + +++ + + +I ++ +F ++ N P+VV++
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 293
Query: 360 NSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 419
NSLI N G A ++ +MI + ++P+ ++F ++ A G + E + L++ M+
Sbjct: 294 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI- 352
Query: 420 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLLGSCRIHCNAE 476
K I P + Y+ +++ +RLDEA + E M + P + +L+ C A+
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKG---FCKAK 409
Query: 477 LAERASAMLFELEPWN-AGNYVLLADIYAEAKMWSDVKSVRKLMGKRVLQKVP 528
E + E+ GN V + D +K+ K V VP
Sbjct: 410 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVP 462
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 152/356 (42%), Gaps = 43/356 (12%)
Query: 133 LDCARKVFDETRERTI----YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTY 188
D A +FDE R+R + Y ++ + G + L ++M + D Y+
Sbjct: 171 FDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSN 230
Query: 189 VLK-ACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRA 247
+++ + + ++S K I + + R G ++ ++++VY K A + +
Sbjct: 231 LIELSRRLCDYS-----KAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKE 285
Query: 248 MPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACD-SIPNSVTMVSVXXXXXX 302
M N+VS+S ++ Y +N ++AL +F +M C + M+ V
Sbjct: 286 MNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDM 345
Query: 303 XXXXXXXXXVHGFILRRGLDSIMPVI---NALITMYGRCGEISIGERVFDKVKNPD---- 355
F R +D I P + N ++ +YG +F ++ D
Sbjct: 346 VKEADRL-----FWSLRKMD-IEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQN 399
Query: 356 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE 415
VV++N++I +YG +KA + + M +G+ P+ I++ T++ AG ++ LF+
Sbjct: 400 VVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQ 459
Query: 416 SMLSKYRIHPGME----HYACM------VDLLGRANRLDEAIKLIEDMPFEPGPTV 461
+ S G+E Y M V L+G A RL +KL +++P E T+
Sbjct: 460 KLRS-----SGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITI 510
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 76/394 (19%), Positives = 158/394 (40%), Gaps = 39/394 (9%)
Query: 80 PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKV 139
P T LI S ++ F + + + D L + LI + L A +
Sbjct: 188 PDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISI 247
Query: 140 FDETRERTI----YIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACV- 194
F + I +N+ E L ++MN +G+ + +Y+ +L V
Sbjct: 248 FSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVE 307
Query: 195 ----VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVF---RA 247
+ SV+ + KE++ + ++ ++DVY + + A+ +F R
Sbjct: 308 NHKFLEALSVFA--EMKEVNCAL-------DLTTCNIMIDVYGQLDMVKEADRLFWSLRK 358
Query: 248 MPAK-NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXX 306
M + N VS++ ++ Y + ++ +A+ LF +++ D N VT ++
Sbjct: 359 MDIEPNVVSYNTILRVYGEAELFGEAIHLFR--LMQRKDIEQNVVTYNTMIKIYGKTMEH 416
Query: 307 XXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKNP----DVVSWNSL 362
+ + RG++ + +I+++G+ G++ +F K+++ D V + ++
Sbjct: 417 EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTM 476
Query: 363 ISMY---GNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLS 419
I Y G G+ K+ ++H+ P I T + + AG EE +F
Sbjct: 477 IVAYERVGLMGHAKR-------LLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFE 529
Query: 420 KYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
+ + + CM++L R R I++ E M
Sbjct: 530 SGEV-KDISVFGCMINLYSRNQRYVNVIEVFEKM 562
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/413 (19%), Positives = 160/413 (38%), Gaps = 58/413 (14%)
Query: 57 LIQSLCRGGNHKQALEVLWSER----NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I + G+ +AL++L + + T+ +I + A + + L SG
Sbjct: 275 IIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSG 334
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTI----YIWNAFFRALAMVGRGEELL 168
+ L+ Y + G L A + E +R + + ++ A GR E
Sbjct: 335 IKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESAR 394
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
+ ++M + + F ++ +L QK ++ + G + + +
Sbjct: 395 IVLKEMEAGDVQPNSFVFSRLLAGFR----DRGEWQKTFQVLKEMKSIGVKPDRQFYNVV 450
Query: 229 LDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
+D + KF C+ +A + F M ++ + V+W+ +I C+ K+ + A E+F M C
Sbjct: 451 IDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGC 510
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 344
+P + T N +I YG
Sbjct: 511 --LPCATT-----------------------------------YNIMINSYGDQERWDDM 533
Query: 345 ERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
+R+ K+K+ P+VV+ +L+ +YG +G AI+ E M G+ PS + ++ A
Sbjct: 534 KRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 593
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
+ GL E+ F M S + P + +++ G R EA +++ M
Sbjct: 594 YAQRGLSEQAVNAFRVMTSD-GLKPSLLALNSLINAFGEDRRDAEAFAVLQYM 645
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 146/380 (38%), Gaps = 26/380 (6%)
Query: 57 LIQSLCRGGNHKQALEVLWSER-----NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
+I +L G +A E L+ E P + L++ + D + +
Sbjct: 310 IISALADSGRTLEA-EALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKR 368
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTI----YIWNAFFRALAMVGRGEEL 167
G+ D + + LI+ Y G + AR V E + ++++ G ++
Sbjct: 369 GVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKT 428
Query: 168 LELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
++ ++M G+ DR Y V+ +F+ L +L G E + T
Sbjct: 429 FQVLKEMKSIGVKPDRQFYNVVID--TFGKFNC--LDHAMTTFDRMLSEGIEPDRVTWNT 484
Query: 228 LLDVYAKFGCISYANSVFRAMPAKN----SVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
L+D + K G A +F AM + + +++ MI Y + L +M +
Sbjct: 485 LIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQG 544
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
+PN VT ++ + GL + NALI Y + G
Sbjct: 545 I--LPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQ 602
Query: 344 GERVF-----DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 398
F D +K P +++ NSLI+ +G + +A + + M GV P +++ T++
Sbjct: 603 AVNAFRVMTSDGLK-PSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLM 661
Query: 399 CACSHAGLVEEGKILFESML 418
A ++ +++E M+
Sbjct: 662 KALIRVDKFQKVPVVYEEMI 681
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/415 (19%), Positives = 172/415 (41%), Gaps = 25/415 (6%)
Query: 57 LIQSLCRGGNHKQALEV----LWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
+I LC+ G +++A EV L S +P T L+ +K + V +
Sbjct: 311 VINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRD 370
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTI----YIWNAFFRALAMVGRGEELL 168
+ D + +++++ G+LD A F+ +E + I+ + G +
Sbjct: 371 VVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAM 430
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
L +M G D TY +L + L + ++ + + + +T L
Sbjct: 431 NLRNEMLQQGCAMDVVTYNTILHGLCKRKM----LGEADKLFNEMTERALFPDSYTLTIL 486
Query: 229 LDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
+D + K G + A +F+ M K + V+++ ++ + K A E++ MV +
Sbjct: 487 IDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV--SK 544
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 344
+ +P ++ + V ++ + + + + N++I Y R G S G
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Query: 345 ERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQ--GVSPSYISFITVL 398
E +K+ + PD +S+N+LI + KA + + M + G+ P ++ ++L
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664
Query: 399 CACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
++E +++ M+ + ++P Y CM++ + L EA ++ ++M
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIER-GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/453 (20%), Positives = 181/453 (39%), Gaps = 67/453 (14%)
Query: 104 VHRYLVDSGLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIY----IWNAFFRALA 159
V++ + SG+ + Y ++N + G ++ + +E+ +Y +N A +
Sbjct: 222 VYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYS 281
Query: 160 MVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGY 218
G EE EL M G +TY V+ C ++ ++ KE+ A +LR G
Sbjct: 282 SKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKY-----ERAKEVFAEMLRSGL 336
Query: 219 EENIHVMTTLLDVYAKFGCISYANSVFRAMPAKNSV----SWSAMIGCYAKNDMPVKALE 274
+ +LL K G + VF M +++ V +S+M+ + ++ KAL
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 396
Query: 275 LFHQMVLEACDSIPNSVT------------MVSVXXXXX--------XXXXXXXXXXVHG 314
F+ ++ IP++V M+SV +HG
Sbjct: 397 YFNS--VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHG 454
Query: 315 FILRRGLDSIMPVINAL-------------ITMYGRC--GEISIGERVFDKVKNP----D 355
R+ L + N + I + G C G + +F K+K D
Sbjct: 455 LCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLD 514
Query: 356 VVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFE 415
VV++N+L+ +G G A +I+ +M+ + + P+ IS+ ++ A G + E +++
Sbjct: 515 VVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWD 574
Query: 416 SMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM---PFEPGPTVWGSLL-GSCRI 471
M+SK I P + M+ R+ + +E M F P + +L+ G R
Sbjct: 575 EMISK-NIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVR- 632
Query: 472 HCNAELAERASAMLFELEPWNAGNYVLLADIYA 504
E +A ++ ++E G L+ D++
Sbjct: 633 ---EENMSKAFGLVKKMEEEQGG---LVPDVFT 659
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/436 (19%), Positives = 181/436 (41%), Gaps = 29/436 (6%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
++ +LC+ G ++ L + P T LI + + K + ++ + G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNAFFRALAMVG--RGE--ELL 168
Y +IN + G + A++VF E + + +R+L M +G+ E
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
+++ M + D ++ ++ S L K ++ G + + T L
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSG----NLDKALMYFNSVKEAGLIPDNVIYTIL 416
Query: 229 LDVYAKFGCISYA----NSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
+ Y + G IS A N + + A + V+++ ++ K M +A +LF++M A
Sbjct: 417 IQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERAL 476
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 344
P+S T+ + + + + + + N L+ +G+ G+I
Sbjct: 477 --FPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534
Query: 345 ERVF-DKVKN---PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCA 400
+ ++ D V P +S++ L++ + G+ +A ++++ MI + + P+ + +++
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594
Query: 401 CSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGPT 460
+G +G+ E M+S+ + P Y ++ R + +A L++ M E G
Sbjct: 595 YCRSGNASDGESFLEKMISEGFV-PDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 461 V-----WGSLL-GSCR 470
V + S+L G CR
Sbjct: 654 VPDVFTYNSILHGFCR 669
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/345 (18%), Positives = 134/345 (38%), Gaps = 47/345 (13%)
Query: 57 LIQSLCRGGNHKQAL----EVLWSERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LIQ CR G A+ E+L T ++ ++ + + + +
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYI----WNAFFRALAMVGRGEELL 168
L D Y T LI+ + +LG+L A ++F + +E+ I + +N VG +
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTL 228
E++ M I +Y+ ++ A S L + + ++ + + + ++
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALC----SKGHLAEAFRVWDEMISKNIKPTVMICNSM 591
Query: 229 LDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEAC 284
+ Y + G S S M ++ + +S++ +I + + + KA L +M E
Sbjct: 592 IKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQG 651
Query: 285 DSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIG 344
+P+ T S+ +HGF + + V+ +I
Sbjct: 652 GLVPDVFTYNSI---------------LHGFCRQNQMKEAEVVLRKMI------------ 684
Query: 345 ERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSP 389
++ NPD ++ +I+ + + +A +I + M+ +G SP
Sbjct: 685 ----ERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 146/371 (39%), Gaps = 23/371 (6%)
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYIWNA-----FFRALAMVGRGEE 166
G D ++ T L+ + +L A KVFD + N+ L VGR EE
Sbjct: 225 GFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEE 284
Query: 167 LLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMT 226
L QM G TYT ++KA + K + ++ G + N+H T
Sbjct: 285 AFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL----IDKAFNLFDEMIPRGCKPNVHTYT 340
Query: 227 TLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLE 282
L+D + G I AN V R M + ++++A+I Y K+ V A EL M
Sbjct: 341 VLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKR 400
Query: 283 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 342
AC PN T + + +L GL + N LI R G ++
Sbjct: 401 ACK--PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMN 458
Query: 343 IGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVL 398
++ + PD +++ ++I+ + G A M+ +G+S ++ T++
Sbjct: 459 TAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLI 518
Query: 399 CACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKL---IEDMPF 455
G + + E+++ K RI ++D+L + ++ E + + I +
Sbjct: 519 DGVCKVGKTRDALFILETLV-KMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGL 577
Query: 456 EPGPTVWGSLL 466
P + +L+
Sbjct: 578 VPSVVTYTTLV 588
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 148/363 (40%), Gaps = 27/363 (7%)
Query: 140 FDETRE----RTIY-IWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACV 194
FDE RE R Y +++ +LA + G YR+M G Y ++ A
Sbjct: 147 FDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALC 206
Query: 195 VSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMP----- 249
+ ++ + + + IL+ G+ + H+ T+LL + + + A VF M
Sbjct: 207 KNGYT----EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTC 262
Query: 250 AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXX 309
A NSVS+S +I + +A L QM + C P++ T +
Sbjct: 263 APNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQ--PSTRTYTVLIKALCDRGLIDKA 320
Query: 310 XXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDK-VKN---PDVVSWNSLISM 365
+ ++ RG + LI R G+I V K VK+ P V+++N+LI+
Sbjct: 321 FNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALING 380
Query: 366 YGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHP 425
Y +G A ++ M + P+ +F ++ G + L + ML + P
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN-GLSP 439
Query: 426 GMEHYACMVDLLGRANRLDEAIKLIEDM---PFEPGPTVWGSLLGSCRIHCNAELAERAS 482
+ Y ++D L R ++ A KL+ M EP + +++ + C A+ AS
Sbjct: 440 DIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA---FCKQGKADVAS 496
Query: 483 AML 485
A L
Sbjct: 497 AFL 499
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/527 (19%), Positives = 207/527 (39%), Gaps = 79/527 (14%)
Query: 7 PQHVRQAPFQTHLCYTSHVSSRLPVCFVSINPSANPVKDIKSXXXXXXXQLIQSLCRGGN 66
P V + LC VS L + + P L+ LC G
Sbjct: 140 PDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPT-------LITLNALVNGLCLNGK 192
Query: 67 HKQALEVLWSER------NPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSGLDQDPYLA 120
A VL +R P+ T +++ + + ++ R + + + D
Sbjct: 193 VSDA--VLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKY 250
Query: 121 TKLINMYHELGSLDCARKVFDETR----ERTIYIWNAFFRALAMVGRGEELLELYRQMNW 176
+ +I+ + GSLD A +F+E + I I+ R GR ++ +L R M
Sbjct: 251 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIK 310
Query: 177 SGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFG 236
I D ++ ++ C V E L++ +E+H +++ G + T+L+D + K
Sbjct: 311 RKITPDVVAFSALID-CFVKE---GKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 237 CISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVT 292
+ AN + M +K N +++ +I Y K ++ LELF +M L
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSL----------- 415
Query: 293 MVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVK 352
RG+ + N LI + G++ + + +F ++
Sbjct: 416 --------------------------RGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 353 N----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVE 408
+ PD+VS+ L+ +NG +KA++IFE + + + ++ +A V+
Sbjct: 450 SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 509
Query: 409 EGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSL 465
+ LF S+ K + P ++ Y M+ L + L EA L M + P + L
Sbjct: 510 DAWDLFCSLPLK-GVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Query: 466 LGSCRIHCNAELAERASAMLFELE----PWNAGNYVLLADIYAEAKM 508
+ R H A +++ ++ E++ +A ++ D+ ++ ++
Sbjct: 569 I---RAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 127/290 (43%), Gaps = 17/290 (5%)
Query: 172 RQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDV 231
R+M SGI D +TY ++K ++ + G ++ + G N V TLL
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTN----RIGDGFKLLQIMKTSGVAPNAVVYNTLLHA 226
Query: 232 YAKFGCISYANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDS---IP 288
K G + A S+ M N V+++ +I Y ++++ L LE C S +P
Sbjct: 227 LCKNGKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVL-----LEKCFSLGFVP 281
Query: 289 NSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVF 348
+ VT+ V V + +G + N L+ Y G++ + +R F
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFF 341
Query: 349 DKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHA 404
+++ P+V ++N LI+ Y + G A+ F +M + ++ +F T++ S
Sbjct: 342 IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG 401
Query: 405 GLVEEGKILFESMLSKYRIHPG-MEHYACMVDLLGRANRLDEAIKLIEDM 453
G ++G + E M +H ++ Y C++ + NR ++A++ + M
Sbjct: 402 GRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKM 451
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 179/425 (42%), Gaps = 28/425 (6%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHK----TIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
LI LC G +ALE++ HK TI L+ ++ + +V+ G
Sbjct: 164 LINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG 223
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYI----WNAFFRALAMVGRGEELL 168
+ ++N+ + G A ++ + ER I + ++ L G +
Sbjct: 224 CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAF 283
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
L+ +M GI ++ TY ++ C + G ++ ++++ N+ +
Sbjct: 284 NLFNEMEMKGITTNIITYNILIGGFCNAGRW-----DDGAKLLRDMIKRKINPNVVTFSV 338
Query: 228 LLDVYAKFGCISYANSVFRAMP----AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
L+D + K G + A + + M A ++++++++I + K + KA ++ MV +
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
CD PN T + + + RG+ + N LI + G++++
Sbjct: 399 CD--PNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456
Query: 344 GERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
+ +F ++ + P++V++ L+ +NG +KA++IFE + + + ++
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPG- 458
+A V++ LF S+ K + PG++ Y M+ L + L EA L M E G
Sbjct: 517 GMCNASKVDDAWDLFCSLPLK-GVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME-EDGH 574
Query: 459 -PTVW 462
P W
Sbjct: 575 APDGW 579
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/374 (20%), Positives = 148/374 (39%), Gaps = 64/374 (17%)
Query: 145 ERTIYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKACVVSEFSVYPLQ 204
E ++ L + GR E LEL +M G D T ++ +S
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLS-------- 206
Query: 205 KGKEIHANIL-----RHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAKN----SVS 255
GKE A +L +G + N +L+V K G + A + R M +N +V
Sbjct: 207 -GKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 256 WSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGF 315
+S +I K+ A LF++M +
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEM---------------------------------- 291
Query: 316 ILRRGLDSIMPVINALITMYGRCGEISIGERVF-DKVK---NPDVVSWNSLISMYGNNGY 371
+G+ + + N LI + G G ++ D +K NP+VV+++ LI + G
Sbjct: 292 ---KGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 372 GKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYA 431
++A ++ + MIH+G++P I++ +++ +++ + + M+SK P + +
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK-GCDPNIRTFN 407
Query: 432 CMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLL-GSCRIHCNAELAERASAMLFE 487
+++ +ANR+D+ ++L M + +L+ G C + E M+
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR 467
Query: 488 LEPWNAGNYVLLAD 501
P N Y +L D
Sbjct: 468 KVPPNIVTYKILLD 481
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 159/411 (38%), Gaps = 53/411 (12%)
Query: 57 LIQSLCRGGNHKQALEVLWSERN-----PSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDS 111
++ C+ G + AL + N P T L+ + ++ ++
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324
Query: 112 GLDQDPYLATKLINMYHELGSLDCARKVFDETRER----TIYIWNAFFRALAMVGRGEEL 167
G D D Y +I+ +LG + A +V D+ R +N L + EE
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 168 LELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMT 226
EL R + GI D T+ +++ C+ V E+ + G E +
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRV-----AMELFEEMRSKGCEPDEFTYN 439
Query: 227 TLLDVYAKFGCISYANSVFRAMP----AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLE 282
L+D G + A ++ + M A++ ++++ +I + K + +A E+F +M +
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH 499
Query: 283 ACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEIS 342
NSVT ++ + G R ++ +++ +I M G
Sbjct: 500 GVSR--NSVTYNTL---------------IDGLCKSRRVEDAAQLMDQMI-MEG------ 535
Query: 343 IGERVFDKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACS 402
+ PD ++NSL++ + G KKA I + M G P +++ T++
Sbjct: 536 ---------QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLC 586
Query: 403 HAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDM 453
AG VE L S+ K I+ Y ++ L R + EAI L +M
Sbjct: 587 KAGRVEVASKLLRSIQMK-GINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/416 (21%), Positives = 188/416 (45%), Gaps = 32/416 (7%)
Query: 124 INMYHELGSLDCARKVF-DETRER---TIYIWNAFFRALAMVGRGEELLELYRQMNWSGI 179
IN ++L LD A +F D + R +I ++ A+A + + + ++ L QM GI
Sbjct: 54 INRLNDL-KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGI 112
Query: 180 PSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTTLLDVYAKFGCI 238
+ +TY+ ++ C S+ S+ + A +++ GYE +I + +LL+ + I
Sbjct: 113 SHNLYTYSILINCFCRRSQLSL-----ALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 239 SYANSVFRAMP----AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEACDSIPNSVTMV 294
S A S+ M +S +++ +I +++ +A+ L +MV++ C P+ VT
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQ--PDLVTYG 225
Query: 295 SVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISIGERVFDKVKN- 353
V + + + ++ + + N +I ++ +F ++ N
Sbjct: 226 IVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285
Query: 354 ---PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLCACSHAGLVEEG 410
P+VV++NSLI N G A ++ +MI + ++P+ ++F ++ A G + E
Sbjct: 286 GIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 345
Query: 411 KILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE---PGPTVWGSLLG 467
+ L++ M+ K I P + Y+ +++ +RLDEA + E M + P + +L+
Sbjct: 346 EKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI- 403
Query: 468 SCRIHCNAELAERASAMLFELEP----WNAGNYVLLADIYAEAKMWSDVKSVRKLM 519
+ C A+ + + E+ N Y L + +A+ + + V K M
Sbjct: 404 --KGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQM 457
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/420 (20%), Positives = 170/420 (40%), Gaps = 26/420 (6%)
Query: 57 LIQSLCRGGNHKQALEVLWS----ERNPSHKTIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L+ C G A+ ++ P T LI + + S+ + +V G
Sbjct: 157 LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKG 216
Query: 113 LDQDPYLATKLINMYHELGSLDCA----RKVFDETRERTIYIWNAFFRALAMVGRGEELL 168
D ++N + G +D A +K+ E + I+N AL + L
Sbjct: 217 CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDAL 276
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
L+ +M+ GI + TY +++ C +S + ++++ N+ +
Sbjct: 277 NLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWS-----DASRLLSDMIERKINPNVVTFSA 331
Query: 228 LLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
L+D + K G + A ++ M + + ++S++I + +D +A +F M+ +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKD 391
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
C PN VT ++ + + +RGL LI + + E
Sbjct: 392 C--FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449
Query: 344 GERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
+ VF ++ + PD+++++ L+ NNG + A+ +FE + + P ++ ++
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFEPGP 459
AG VE+G LF S LS + P + Y M+ R +EA L +M E GP
Sbjct: 510 GMCKAGKVEDGWDLFCS-LSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK-EEGP 567
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 140/316 (44%), Gaps = 17/316 (5%)
Query: 217 GYEENIHVMTTL---LDVYAKFGCIS-YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 272
G++ + H TT+ L +FG I+ + + R N+V+++ +I Y + + +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 273 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALI 332
+ +F+QM C P+ VT ++ ++ + GL + +I
Sbjct: 419 MNVFNQMQEAGCK--PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 333 TMYGRCGEISIGERVF----DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 388
G+ G + ++F D+ P++V++N ++ ++ + A++++ +M + G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 389 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 448
P +++ V+ H G +EE + +F M K I P Y +VDL G+A +++A +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 449 LIEDM---PFEPGPTVWGSLLGS-CRIHCNAELAERASAML-FELEPWNAGNYVLLADIY 503
+ M P SLL + R++ AE E ML L P + Y LL
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP-SLQTYTLLLSCC 654
Query: 504 AEAKMWSDVKSVRKLM 519
+ + D+ +LM
Sbjct: 655 TDGRSKLDMGFCGQLM 670
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 140/316 (44%), Gaps = 17/316 (5%)
Query: 217 GYEENIHVMTTL---LDVYAKFGCIS-YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 272
G++ + H TT+ L +FG I+ + + R N+V+++ +I Y + + +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 273 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALI 332
+ +F+QM C P+ VT ++ ++ + GL + +I
Sbjct: 419 MNVFNQMQEAGCK--PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 333 TMYGRCGEISIGERVF----DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 388
G+ G + ++F D+ P++V++N ++ ++ + A++++ +M + G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 389 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 448
P +++ V+ H G +EE + +F M K I P Y +VDL G+A +++A +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 449 LIEDM---PFEPGPTVWGSLLGS-CRIHCNAELAERASAML-FELEPWNAGNYVLLADIY 503
+ M P SLL + R++ AE E ML L P + Y LL
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP-SLQTYTLLLSCC 654
Query: 504 AEAKMWSDVKSVRKLM 519
+ + D+ +LM
Sbjct: 655 TDGRSKLDMGFCGQLM 670
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 140/316 (44%), Gaps = 17/316 (5%)
Query: 217 GYEENIHVMTTL---LDVYAKFGCIS-YANSVFRAMPAKNSVSWSAMIGCYAKNDMPVKA 272
G++ + H TT+ L +FG I+ + + R N+V+++ +I Y + + +A
Sbjct: 359 GFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEA 418
Query: 273 LELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALI 332
+ +F+QM C P+ VT ++ ++ + GL + +I
Sbjct: 419 MNVFNQMQEAGCK--PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 333 TMYGRCGEISIGERVF----DKVKNPDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVS 388
G+ G + ++F D+ P++V++N ++ ++ + A++++ +M + G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 389 PSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIK 448
P +++ V+ H G +EE + +F M K I P Y +VDL G+A +++A +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWI-PDEPVYGLLVDLWGKAGNVEKAWQ 595
Query: 449 LIEDM---PFEPGPTVWGSLLGS-CRIHCNAELAERASAML-FELEPWNAGNYVLLADIY 503
+ M P SLL + R++ AE E ML L P + Y LL
Sbjct: 596 WYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRP-SLQTYTLLLSCC 654
Query: 504 AEAKMWSDVKSVRKLM 519
+ + D+ +LM
Sbjct: 655 TDGRSKLDMGFCGQLM 670
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 148/342 (43%), Gaps = 18/342 (5%)
Query: 148 IYIWNAFFRALAMVGRGEELLELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQKG 206
I +NA +L R + + ++++ GI + TYT ++ C S +S
Sbjct: 190 IVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS-----DA 244
Query: 207 KEIHANILRHGYEENIHVMTTLLDVYAKFGCISYANSVFRAMPAK----NSVSWSAMIGC 262
+ +++++ N+ + LLD + K G + A +F M + V++S++I
Sbjct: 245 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 304
Query: 263 YAKNDMPVKALELFHQMVLEACDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLD 322
+D +A ++F MV + C + + V+ ++ + + +RGL
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGC--LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362
Query: 323 SIMPVINALITMYGRCGEISIGERVFDKVK----NPDVVSWNSLISMYGNNGYGKKAIQI 378
S N LI + + G++ + F ++ +PD+ ++N L+ +NG +KA+ I
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422
Query: 379 FENMIHQGVSPSYISFITVLCACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLG 438
FE+M + + +++ TV+ G VEE LF S LS + P + Y M+ L
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS-LSLKGLKPDIVTYTTMMSGLC 481
Query: 439 RANRLDEAIKLIEDMPFEPGPTVWGSLLGSCRIHCNAELAER 480
L E L M E G L I +AEL ++
Sbjct: 482 TKGLLHEVEALYTKMKQE-GLMKNDCTLSDGDITLSAELIKK 522
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/453 (18%), Positives = 191/453 (42%), Gaps = 31/453 (6%)
Query: 57 LIQSLCRGGNHKQALEVLWSERNPSHK----TIEVLIQSCAQKSSFSDGRDVHRYLVDSG 112
L+ LC +ALE++ HK T+ L+ SD + +V++G
Sbjct: 164 LLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETG 223
Query: 113 LDQDPYLATKLINMYHELGSLDCARKVFDETRERTIYI----WNAFFRALAMVGRGEELL 168
+ ++N+ + G A ++ + ER I + ++ L G +
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 169 ELYRQMNWSGIPSDRFTYTYVLKA-CVVSEFSVYPLQKGKEIHANILRHGYEENIHVMTT 227
L+ +M G +D TY ++ C + G ++ ++++ N+ +
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRW-----DDGAKLLRDMIKRKISPNVVTFSV 338
Query: 228 LLDVYAKFGCISYANSVFRAMP----AKNSVSWSAMIGCYAKNDMPVKALELFHQMVLEA 283
L+D + K G + A+ + + M A N+++++++I + K + +A+++ M+ +
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 284 CDSIPNSVTMVSVXXXXXXXXXXXXXXXVHGFILRRGLDSIMPVINALITMYGRCGEISI 343
CD P+ +T + + + RG+ + N L+ + + G++ +
Sbjct: 399 CD--PDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 344 GERVFDKVKN----PDVVSWNSLISMYGNNGYGKKAIQIFENMIHQGVSPSYISFITVLC 399
+++F ++ + PD+VS+ L+ +NG +KA++IF + + ++ ++
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIH 516
Query: 400 ACSHAGLVEEGKILFESMLSKYRIHPGMEHYACMVDLLGRANRLDEAIKLIEDMPFE--- 456
+A V++ LF S+ K + Y M+ L R + L +A L M E
Sbjct: 517 GMCNASKVDDAWDLFCSLPLK-GVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHA 575
Query: 457 PGPTVWGSLLGSCRIHCNAELAERASAMLFELE 489
P + L+ R H + A A+ ++ E++
Sbjct: 576 PDELTYNILI---RAHLGDDDATTAAELIEEMK 605