Miyakogusa Predicted Gene
- Lj1g3v3438800.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3438800.1 Non Chatacterized Hit- tr|A3AD48|A3AD48_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,34.85,2e-17,seg,NULL,CUFF.30664.1
(495 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G37960.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 267 1e-71
AT2G37960.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 267 1e-71
AT3G54060.2 | Symbols: | unknown protein; BEST Arabidopsis thal... 220 2e-57
AT3G54060.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 220 2e-57
>AT2G37960.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G54060.2);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr2:15886962-15889180
REVERSE LENGTH=480
Length = 480
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 193/503 (38%), Positives = 269/503 (53%), Gaps = 58/503 (11%)
Query: 5 QSNSKPKKPETFGKGKVTPPQVAFIVDRYLADNNFSSTRSAFRIEASSLIAHSPVHEAPR 64
+SN G G+VTP QVAF+VDRYL DN FS TRS FR EASSLI++SPV E P
Sbjct: 3 RSNRSKTSERIIGNGEVTPIQVAFLVDRYLCDNRFSKTRSLFRSEASSLISNSPVREVPN 62
Query: 65 SLLTLGQMLDEYICLKEQKVMVDQERAIVEQEKNRVQMLLQGMQNVMTAYNASGNLPLPA 124
SLL L ++L+EYI LK++K+++DQE++ ++QEK RVQ LL GMQ+VM AYN+S P
Sbjct: 63 SLLPLNEILNEYIRLKKEKIVMDQEKSKLDQEKTRVQNLLNGMQDVMNAYNSSTAAAPPP 122
Query: 125 AKSAGAVVP---QKTFSNKPNSGVGVPTS------TQNRMNIQSLPPXXXXXXXXXXXXT 175
+ P Q S + GV +S TQN M + SLP T
Sbjct: 123 PPVITSAAPMDKQVVASTSKQNNFGVSSSGCTVYNTQNAMTV-SLPGNKRVGNFTGPCIT 181
Query: 176 LLTNVSDRKRKDTKAVDAPLAAKKSRGRSSTRKIPSQGQNTLQQSNNVASIQMEAQPSAI 235
+++ +++ +V AP S R +KIP Q+ N + Q PS +
Sbjct: 182 --QSITKKRKSPEVSVGAP-----SVSRKGMKKIP--------QAANYLTFQT---PSEM 223
Query: 236 RTSAEKCTPS-ESQVQGSNVAKCLFNQSSHAVSSNSPVPKTPPRGKSLQSDTNISPAEIS 294
+T + ES S+VAKCLF++S + SNS P+TP + S QSD
Sbjct: 224 QTPLNNGVATNESSDLTSSVAKCLFDKSGTSPPSNSTCPRTPQQKVSPQSD--------- 274
Query: 295 SVAPSNREAAPTRCTVISTRRVMVSPAKQMA--YIEMSHCI---SPVKTDSNRVNKRDHV 349
+E PT CT+++ R+ VSP KQ+A +E SH + SPVK++ +KRDHV
Sbjct: 275 ------KEVTPTNCTIVTKERITVSPLKQIASYTVERSHTVSSFSPVKSNLKMSSKRDHV 328
Query: 350 RSRLDFDAVDIPESLNNPLPNEI---STSESEKDLDIFGIDFPNLDALGIDFSFSELLNY 406
+ RL+FD + L+ P ++ S+S SE + D+F IDF N+D L DFSFSELL
Sbjct: 329 KGRLNFDDTEATMHLDAPATVDMVSTSSSGSEAEADLFDIDFSNIDLLSEDFSFSELLFD 388
Query: 407 LDFPCDCIDFSYNPTTSSPSEDNASGSYNECNSGHVTPD------ISNVAEVRCEKDMRI 460
D C+ + P S+ + ASGS E + ++ PD S V E+ KDM
Sbjct: 389 FDIGCEEMSNHSLPQPSNFHIETASGSSPESRNTNLEPDQVVSEYTSTVTEMIQGKDMNT 448
Query: 461 LGPDCLTAMKSVTKSITVFSPEK 483
G D +T +KS+TK + + SP K
Sbjct: 449 QGSDSMTTVKSITKCLRILSPAK 471
>AT2G37960.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G54060.2); Has 418 Blast hits to 247 proteins
in 92 species: Archae - 0; Bacteria - 163; Metazoa - 49;
Fungi - 80; Plants - 28; Viruses - 0; Other Eukaryotes -
98 (source: NCBI BLink). | chr2:15886962-15889180
REVERSE LENGTH=480
Length = 480
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 193/503 (38%), Positives = 269/503 (53%), Gaps = 58/503 (11%)
Query: 5 QSNSKPKKPETFGKGKVTPPQVAFIVDRYLADNNFSSTRSAFRIEASSLIAHSPVHEAPR 64
+SN G G+VTP QVAF+VDRYL DN FS TRS FR EASSLI++SPV E P
Sbjct: 3 RSNRSKTSERIIGNGEVTPIQVAFLVDRYLCDNRFSKTRSLFRSEASSLISNSPVREVPN 62
Query: 65 SLLTLGQMLDEYICLKEQKVMVDQERAIVEQEKNRVQMLLQGMQNVMTAYNASGNLPLPA 124
SLL L ++L+EYI LK++K+++DQE++ ++QEK RVQ LL GMQ+VM AYN+S P
Sbjct: 63 SLLPLNEILNEYIRLKKEKIVMDQEKSKLDQEKTRVQNLLNGMQDVMNAYNSSTAAAPPP 122
Query: 125 AKSAGAVVP---QKTFSNKPNSGVGVPTS------TQNRMNIQSLPPXXXXXXXXXXXXT 175
+ P Q S + GV +S TQN M + SLP T
Sbjct: 123 PPVITSAAPMDKQVVASTSKQNNFGVSSSGCTVYNTQNAMTV-SLPGNKRVGNFTGPCIT 181
Query: 176 LLTNVSDRKRKDTKAVDAPLAAKKSRGRSSTRKIPSQGQNTLQQSNNVASIQMEAQPSAI 235
+++ +++ +V AP S R +KIP Q+ N + Q PS +
Sbjct: 182 --QSITKKRKSPEVSVGAP-----SVSRKGMKKIP--------QAANYLTFQT---PSEM 223
Query: 236 RTSAEKCTPS-ESQVQGSNVAKCLFNQSSHAVSSNSPVPKTPPRGKSLQSDTNISPAEIS 294
+T + ES S+VAKCLF++S + SNS P+TP + S QSD
Sbjct: 224 QTPLNNGVATNESSDLTSSVAKCLFDKSGTSPPSNSTCPRTPQQKVSPQSD--------- 274
Query: 295 SVAPSNREAAPTRCTVISTRRVMVSPAKQMA--YIEMSHCI---SPVKTDSNRVNKRDHV 349
+E PT CT+++ R+ VSP KQ+A +E SH + SPVK++ +KRDHV
Sbjct: 275 ------KEVTPTNCTIVTKERITVSPLKQIASYTVERSHTVSSFSPVKSNLKMSSKRDHV 328
Query: 350 RSRLDFDAVDIPESLNNPLPNEI---STSESEKDLDIFGIDFPNLDALGIDFSFSELLNY 406
+ RL+FD + L+ P ++ S+S SE + D+F IDF N+D L DFSFSELL
Sbjct: 329 KGRLNFDDTEATMHLDAPATVDMVSTSSSGSEAEADLFDIDFSNIDLLSEDFSFSELLFD 388
Query: 407 LDFPCDCIDFSYNPTTSSPSEDNASGSYNECNSGHVTPD------ISNVAEVRCEKDMRI 460
D C+ + P S+ + ASGS E + ++ PD S V E+ KDM
Sbjct: 389 FDIGCEEMSNHSLPQPSNFHIETASGSSPESRNTNLEPDQVVSEYTSTVTEMIQGKDMNT 448
Query: 461 LGPDCLTAMKSVTKSITVFSPEK 483
G D +T +KS+TK + + SP K
Sbjct: 449 QGSDSMTTVKSITKCLRILSPAK 471
>AT3G54060.2 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G37960.2); Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr3:20018902-20020826 REVERSE LENGTH=442
Length = 442
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/413 (38%), Positives = 232/413 (56%), Gaps = 38/413 (9%)
Query: 8 SKPKKPETFGKGKVTPPQVAFIVDRYLADNNFSSTRSAFRIEASSLIAHSPVHEAPRSLL 67
S+ K GKG+VTP QVAFIVDRYL DN FS TR+ FR EASSLI+ SP+ P SL+
Sbjct: 5 SRSKGSNLIGKGEVTPTQVAFIVDRYLHDNRFSETRALFRSEASSLISDSPIRNVPNSLM 64
Query: 68 TLGQMLDEYICLKEQKVMVDQERAIVEQEKNRVQMLLQGMQNVMTAYNASGNLPLPAAKS 127
TL ML+ Y+ LK+QKV +DQE+ ++QEK RVQ LLQGM+NVM YNAS P PA+
Sbjct: 65 TLDAMLNHYVSLKKQKVSLDQEKLKLDQEKIRVQNLLQGMENVMNTYNASLTAPPPAS-- 122
Query: 128 AGAVVPQKTFSNKPNSGVGVPTSTQNRMNIQSLPPXXXXXXXXXXXXTLLTNVSDRKRKD 187
A Q+ + +SG+ +T N M++ SL + +++ +++
Sbjct: 123 --APTSQQKNHSISSSGLS-QYNTLNGMSV-SLLGNKRVDFGNFSTPSTSQSITGKRKGP 178
Query: 188 TKAVDAPLAAKKSRGRSSTRKIPSQGQNTLQQSNNVASIQMEAQPSAIRTSAEKCTPSES 247
+V AP ++KSR +T G N L Q++ A+ ++ A+ A+ +E
Sbjct: 179 EVSVTAPPVSRKSRITRAT------GTNKLPQADKAAN-NFTSETLAV---AKNSASNEL 228
Query: 248 QVQGSNVAKCLFNQSSHAVSSNSPVPKTPPRGKSLQSDTNISPAEISSVAPSNREAAPTR 307
GS+V KCLFN++ +V ++S +TP + S SD + S + V P+N T
Sbjct: 229 IGNGSSVVKCLFNKADSSVPTSSTCFRTPQKHASSGSDKSNSSQK--EVTPTN-----TN 281
Query: 308 CTVISTRRVMVSPAKQM-AY-IEMSHCI---SPVKTDSNRVNKRDHVRSRLDFDAVDIPE 362
CT+++ R +SP KQ+ +Y +E SH I SPVK++ NKRDHV+ +L+FD D
Sbjct: 282 CTIVTKERFTISPLKQITSYSVERSHLISFSSPVKSNLKMSNKRDHVKGKLNFDDTDTET 341
Query: 363 SLNNPLPNEI---STSESEKDLDIFGIDFPNLDALGIDFSFSELLNYLDFPCD 412
L P ++ S S SE ++D+F +DF NLD FSELL D C+
Sbjct: 342 CLEAPATADLVSTSPSGSEPEVDLFDMDFSNLD-------FSELLVDFDLGCE 387
>AT3G54060.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G37960.2); Has 455 Blast hits to 322 proteins
in 98 species: Archae - 0; Bacteria - 178; Metazoa - 88;
Fungi - 75; Plants - 28; Viruses - 2; Other Eukaryotes -
84 (source: NCBI BLink). | chr3:20018915-20020826
REVERSE LENGTH=456
Length = 456
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 161/413 (38%), Positives = 232/413 (56%), Gaps = 38/413 (9%)
Query: 8 SKPKKPETFGKGKVTPPQVAFIVDRYLADNNFSSTRSAFRIEASSLIAHSPVHEAPRSLL 67
S+ K GKG+VTP QVAFIVDRYL DN FS TR+ FR EASSLI+ SP+ P SL+
Sbjct: 5 SRSKGSNLIGKGEVTPTQVAFIVDRYLHDNRFSETRALFRSEASSLISDSPIRNVPNSLM 64
Query: 68 TLGQMLDEYICLKEQKVMVDQERAIVEQEKNRVQMLLQGMQNVMTAYNASGNLPLPAAKS 127
TL ML+ Y+ LK+QKV +DQE+ ++QEK RVQ LLQGM+NVM YNAS P PA+
Sbjct: 65 TLDAMLNHYVSLKKQKVSLDQEKLKLDQEKIRVQNLLQGMENVMNTYNASLTAPPPAS-- 122
Query: 128 AGAVVPQKTFSNKPNSGVGVPTSTQNRMNIQSLPPXXXXXXXXXXXXTLLTNVSDRKRKD 187
A Q+ + +SG+ +T N M++ SL + +++ +++
Sbjct: 123 --APTSQQKNHSISSSGLS-QYNTLNGMSV-SLLGNKRVDFGNFSTPSTSQSITGKRKGP 178
Query: 188 TKAVDAPLAAKKSRGRSSTRKIPSQGQNTLQQSNNVASIQMEAQPSAIRTSAEKCTPSES 247
+V AP ++KSR +T G N L Q++ A+ ++ A+ A+ +E
Sbjct: 179 EVSVTAPPVSRKSRITRAT------GTNKLPQADKAAN-NFTSETLAV---AKNSASNEL 228
Query: 248 QVQGSNVAKCLFNQSSHAVSSNSPVPKTPPRGKSLQSDTNISPAEISSVAPSNREAAPTR 307
GS+V KCLFN++ +V ++S +TP + S SD + S + V P+N T
Sbjct: 229 IGNGSSVVKCLFNKADSSVPTSSTCFRTPQKHASSGSDKSNSSQK--EVTPTN-----TN 281
Query: 308 CTVISTRRVMVSPAKQM-AY-IEMSHCI---SPVKTDSNRVNKRDHVRSRLDFDAVDIPE 362
CT+++ R +SP KQ+ +Y +E SH I SPVK++ NKRDHV+ +L+FD D
Sbjct: 282 CTIVTKERFTISPLKQITSYSVERSHLISFSSPVKSNLKMSNKRDHVKGKLNFDDTDTET 341
Query: 363 SLNNPLPNEI---STSESEKDLDIFGIDFPNLDALGIDFSFSELLNYLDFPCD 412
L P ++ S S SE ++D+F +DF NLD FSELL D C+
Sbjct: 342 CLEAPATADLVSTSPSGSEPEVDLFDMDFSNLD-------FSELLVDFDLGCE 387