Miyakogusa Predicted Gene

Lj1g3v3391180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3391180.1 Non Chatacterized Hit- tr|I1K7A1|I1K7A1_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,83.25,0,Ribophorin_I,Ribophorin I; coiled-coil,NULL; seg,NULL;
SUBFAMILY NOT NAMED,NULL; RIBOPHORIN I,Riboph,CUFF.32051.1
         (619 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76400.1 | Symbols:  | Ribophorin I | chr1:28658713-28661672 ...   829   0.0  
AT2G01720.1 | Symbols:  | Ribophorin I | chr2:317193-320016 REVE...   480   e-135

>AT1G76400.1 | Symbols:  | Ribophorin I | chr1:28658713-28661672
           REVERSE LENGTH=614
          Length = 614

 Score =  829 bits (2142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/592 (66%), Positives = 484/592 (81%)

Query: 28  SLSDLILTKVDRRIDLTSQIARISTSLKVENAGSDLVSEILLSFPENQANHLAHLTAKLS 87
           + SDL+L+KV+RRID+TSQIAR++ +LKV N+GS+ VSE  L+FP+   N+LA+L+   S
Sbjct: 23  AFSDLVLSKVERRIDVTSQIARVTKTLKVVNSGSESVSEFALTFPKFLGNNLAYLSVAPS 82

Query: 88  EGKGKGKTSGVGLPVEVVHPEGVPSSLTIYSVTLPKGIGKGDSLTLDVLAVFTHTLEPFP 147
           EGKGK K + V L V     +G+P S+++YSV LPK + KGD+LTL+V+A FT+ L+PFP
Sbjct: 83  EGKGKSKRTLVNLSVREADQKGLPDSISVYSVALPKPLSKGDTLTLEVVAAFTNVLQPFP 142

Query: 148 EKITQADIQLLLFQESAHYLSPYAVKFQSLTVKLPDARIESYTKLDSAKLQGSELKYGPY 207
           EKITQ +I L++ QESA YLSPYAV+ QSL++KLP+ARIESYTK ++ KLQGSELKYGPY
Sbjct: 143 EKITQGEIHLVMLQESAQYLSPYAVESQSLSIKLPNARIESYTKFENTKLQGSELKYGPY 202

Query: 208 ENLPPFSYLPIVVHFENNRPFAVAKELVREIEISHWGNVQVTEHYNLVHGGAQIKGEFSR 267
           +NL  +SY PIVVHFE+   FAVA++LVREIE+SHWGNVQVTE+YN+VH GAQ+KGEFSR
Sbjct: 203 KNLQSYSYSPIVVHFESKAAFAVAEKLVREIEVSHWGNVQVTENYNVVHRGAQLKGEFSR 262

Query: 268 LDYQSRPHVRGASSFRRLLAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRYPL 327
           LD+Q+RP+ RGAS+FR LLA+LPPRAHS+YYRD+IGNISTS +  DSKKTEL IEPR+PL
Sbjct: 263 LDFQARPNPRGASAFRHLLARLPPRAHSIYYRDDIGNISTSEMKSDSKKTELLIEPRFPL 322

Query: 328 FGGWNSAFTIGYGLPLKDFLFGLDGKRFLNITFSTPINDLVIDTLFVKVVLPEGSKDISV 387
           FGGW + FTIGYGLPL DFLF  +GKRFLNI+F +PI DLV + L V+VVLPEGSKDISV
Sbjct: 323 FGGWKTFFTIGYGLPLTDFLFASEGKRFLNISFGSPILDLVTEKLIVQVVLPEGSKDISV 382

Query: 388 SVPYPVKQSQETKFSHLDIAGRPVVVLEKNNVVPEHNVHFQVYYKFNSLSMLREPLMLIS 447
           + P+ VKQSQE K+SHLDIAGRPVVVLEKNNVVP+HN H QVYYKF+++++L EPLMLIS
Sbjct: 383 TTPFAVKQSQEIKYSHLDIAGRPVVVLEKNNVVPDHNQHIQVYYKFSNINLLSEPLMLIS 442

Query: 448 GFFFLFVACIAYVHADFSISKSSASYLAKLQWEEVQATVRQIHNIISRCLTTHDKLEASL 507
           GFF LF+ CI Y  AD SISKSS SYLAKLQW+EV AT++++ +I+ +CL THDKLEASL
Sbjct: 443 GFFILFITCIIYTRADISISKSSPSYLAKLQWDEVLATLQEVQSIVQKCLATHDKLEASL 502

Query: 508 RDLSRTGDVQACKATRXXXXXXXXXXXXXXXXXXAFLQSSPQATPVLSKVEEIITKERDL 567
           RDLSRTGD+Q CKA R                   FLQS P A+ +  KVEE++ KE++L
Sbjct: 503 RDLSRTGDIQTCKAARKSTDSLLKDLSKELKPLLGFLQSFPSASHISPKVEELVVKEKEL 562

Query: 568 QEKLMAKHSTVVDCYEKKLGGREIENRIASHQQKITALRQEIDDLMDVIDEI 619
           QEKLMAKH+TVV+ YEKK  GR+IENRIAS QQKI ALRQEI+DL++ IDEI
Sbjct: 563 QEKLMAKHTTVVEGYEKKSSGRDIENRIASQQQKIIALRQEIEDLLEFIDEI 614


>AT2G01720.1 | Symbols:  | Ribophorin I | chr2:317193-320016 REVERSE
           LENGTH=464
          Length = 464

 Score =  480 bits (1236), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 240/444 (54%), Positives = 316/444 (71%), Gaps = 6/444 (1%)

Query: 28  SLSDLILTKVDRRIDLTSQIARISTSLKVENAGSDLVSEILLSFPENQANHLAHLTAKLS 87
           S  DL +   +RRIDL+S I +   +LKVEN G D  +E+LL+FP  Q  +LA + A  +
Sbjct: 23  SAQDLQIVNAERRIDLSSHIVKAFLTLKVENIGKDPAAEMLLAFPPTQIKNLAMVQALAT 82

Query: 88  EGKGKGKTSGVGLPVEVVHPE--GVPSSLTIYSVTLPKGIGKGDSLTLDVLAVFTHTLEP 145
            GK K KT    LP++V   E    P+    Y VT    +G G++++L+VL + TH+LEP
Sbjct: 83  TGKKKKKTY---LPLDVKPTEQPDAPNDTGYYRVTFISPLGPGETVSLEVLYILTHSLEP 139

Query: 146 FPEKITQADIQLLLFQESAHYLSPYAVKFQSLTVKLPDARIESYTKLDSAKLQGSELKYG 205
           FP +ITQ++ QL+ + +SA  LSPY VK Q+  +K P  R+ES+T ++ A   G E+KYG
Sbjct: 140 FPVEITQSESQLVYYHDSAVILSPYHVKQQTTFIKTPSTRVESFTSIEPANRAGKEIKYG 199

Query: 206 PYENLPPFSYLPIVVHFENNRPFAVAKELVREIEISHWGNVQVTEHYNLVHGGAQIKGEF 265
           PYEN   +SY P+++HFENN PFAV +ELVREIEISHWG++Q+TE+Y L HGGA+ KG F
Sbjct: 200 PYENRASYSYTPVIIHFENNSPFAVVEELVREIEISHWGSLQITENYRLTHGGARHKGVF 259

Query: 266 SRLDYQSRPHVRGASSFRRLLAKLPPRAHSVYYRDEIGNISTSSLWGDSKKTELEIEPRY 325
           SR+DYQS+  V GASSF  LLA LPPR +SVYYRDEIGNISTS L    +K+ELE EPRY
Sbjct: 260 SRVDYQSKRSVSGASSFNALLAVLPPRVNSVYYRDEIGNISTSHLRTGFRKSELEFEPRY 319

Query: 326 PLFGGWNSAFTIGYGLPLKDFLF-GLDGKRFLNITFSTPINDLVIDTLFVKVVLPEGSKD 384
           PLFGGW++ F IGY +PL+D+LF   DG+R+LN TF  P+ + +++ L +KVVLPEGSKD
Sbjct: 320 PLFGGWSATFIIGYRVPLEDYLFEASDGRRYLNFTFGCPLVETIVNKLTIKVVLPEGSKD 379

Query: 385 ISVSVPYPVKQSQETKFSHLDIAGRPVVVLEKNNVVPEHNVHFQVYYKFNSLSMLREPLM 444
            S  +P+ V Q  + K+S+LDI GR VVVL+K+NVVP HNV FQVYY F  + ML EP M
Sbjct: 380 PSAVLPFTVNQELQVKYSYLDIVGRTVVVLQKDNVVPTHNVPFQVYYTFKPIYMLAEPFM 439

Query: 445 LISGFFFLFVACIAYVHADFSISK 468
           L+S FF +FVA +AYVH D +I +
Sbjct: 440 LVSAFFLVFVASLAYVHIDLNIVR 463