Miyakogusa Predicted Gene

Lj1g3v3388990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3388990.1 tr|Q015Z1|Q015Z1_OSTTA Chloroplast channel
forming outer membrane protein (ISS) (Fragment)
OS=Ostreo,35.2,0.000000000000007, ,CUFF.32014.1
         (167 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76405.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   216   5e-57
AT1G20816.1 | Symbols:  | unknown protein; BEST Arabidopsis thal...   214   3e-56
AT1G76405.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    72   2e-13

>AT1G76405.2 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: chloroplast
           envelope; EXPRESSED IN: 21 plant structures; EXPRESSED
           DURING: 13 growth stages; BEST Arabidopsis thaliana
           protein match is: unknown protein (TAIR:AT1G20816.1);
           Has 52 Blast hits to 52 proteins in 19 species: Archae -
           0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50;
           Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
           | chr1:28661994-28663673 FORWARD LENGTH=167
          Length = 167

 Score =  216 bits (551), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 93/167 (55%), Positives = 129/167 (77%)

Query: 1   METSLRYAGDSKALRIHAKEKLRIDTNTFFQVQGELDTRYGQPNSLRALIRHFYPNLSAT 60
           METS+RY  +SK+++IHAKEK+ +++ T  Q+ GELDT  G P+   A+IRHF+P  S  
Sbjct: 1   METSMRYTSNSKSMKIHAKEKVPVNSKTHLQLHGELDTGTGAPSYFCAMIRHFFPEASTG 60

Query: 61  LGVGMRYDKHEKLRYTVVAKKTFPVTINGLVNFKIKGGCDVDKEFKERKSRGAAEFSWSV 120
           LGVG+ YDK +KLR  V  KK FPV  +  V F IKG CD+D++  ++  +GAAEF+W++
Sbjct: 61  LGVGLHYDKRQKLRCLVRGKKEFPVRADKRVTFNIKGRCDIDQDLNQKNPKGAAEFAWNI 120

Query: 121 FNFQKDQDVRLRVGYEIFDQVPYLQIRENNWTFNADYKGRWNVRYDL 167
            +F++DQDVR++VGYE+FD+VPY+QIRENNWT NA+ KG+WN+RYDL
Sbjct: 121 MDFKEDQDVRIKVGYEMFDKVPYMQIRENNWTLNANMKGKWNLRYDL 167


>AT1G20816.1 | Symbols:  | unknown protein; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT1G76405.2); Has 52 Blast hits to 52 proteins in
           19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
           - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 2
           (source: NCBI BLink). | chr1:7233814-7234941 FORWARD
           LENGTH=167
          Length = 167

 Score =  214 bits (544), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 97/167 (58%), Positives = 128/167 (76%)

Query: 1   METSLRYAGDSKALRIHAKEKLRIDTNTFFQVQGELDTRYGQPNSLRALIRHFYPNLSAT 60
           METSLRYA +S++L+IHAKEK  +++ T  Q+ GELDT  G P+   A+IR+F+   S  
Sbjct: 1   METSLRYATNSRSLKIHAKEKFPVNSKTRLQLHGELDTGAGVPSYFCAMIRYFFHEASTN 60

Query: 61  LGVGMRYDKHEKLRYTVVAKKTFPVTINGLVNFKIKGGCDVDKEFKERKSRGAAEFSWSV 120
           LGVG+ YDK EKLR  V  KK FPV  + +V F IKG CD D++  +R ++GAAEF W++
Sbjct: 61  LGVGLHYDKREKLRCLVRGKKKFPVITDEVVTFNIKGRCDFDQDLVQRNAKGAAEFDWNI 120

Query: 121 FNFQKDQDVRLRVGYEIFDQVPYLQIRENNWTFNADYKGRWNVRYDL 167
           + FQKDQD+RLR+GYE+F++VPY+QIRENNWTFN + KG+WNVRYDL
Sbjct: 121 WKFQKDQDLRLRIGYEMFEKVPYMQIRENNWTFNTNLKGKWNVRYDL 167


>AT1G76405.1 | Symbols:  | unknown protein; FUNCTIONS IN:
          molecular_function unknown; INVOLVED IN:
          biological_process unknown; LOCATED IN: chloroplast
          envelope; EXPRESSED IN: 21 plant structures; EXPRESSED
          DURING: 13 growth stages; BEST Arabidopsis thaliana
          protein match is: unknown protein (TAIR:AT1G20816.1);
          Has 38 Blast hits to 38 proteins in 14 species: Archae
          - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38;
          Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
          | chr1:28661994-28662979 FORWARD LENGTH=59
          Length = 59

 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 42/55 (76%)

Query: 1  METSLRYAGDSKALRIHAKEKLRIDTNTFFQVQGELDTRYGQPNSLRALIRHFYP 55
          METS+RY  +SK+++IHAKEK+ +++ T  Q+ GELDT  G P+   A+IRHF+P
Sbjct: 1  METSMRYTSNSKSMKIHAKEKVPVNSKTHLQLHGELDTGTGAPSYFCAMIRHFFP 55