Miyakogusa Predicted Gene

Lj1g3v3384750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3384750.1 Non Chatacterized Hit- tr|B9FG32|B9FG32_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,37.04,1e-17,seg,NULL,CUFF.30598.1
         (207 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G20770.1 | Symbols:  | unknown protein; Has 59 Blast hits to ...   158   2e-39

>AT1G20770.1 | Symbols:  | unknown protein; Has 59 Blast hits to 59
           proteins in 24 species: Archae - 0; Bacteria - 0;
           Metazoa - 26; Fungi - 4; Plants - 29; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:7215345-7216648 REVERSE LENGTH=215
          Length = 215

 Score =  158 bits (400), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 87/183 (47%), Positives = 121/183 (66%), Gaps = 17/183 (9%)

Query: 33  DKLALQFMDSVHNYLSLFDALSSTLGQGWLDLASARHSMGASRINSSLLDLKFHPAATTS 92
           D+  LQF+DS+  YL+L D+++S L +GW DLASARHSMG  RINS+LLDLK+HPA++T 
Sbjct: 30  DENVLQFLDSLDGYLTLMDSVNSKLREGWFDLASARHSMGTLRINSTLLDLKYHPASSTL 89

Query: 93  KI----VKYQGEQPCFMLRKWVS---SEHENSQLEDKNGKL----------QDSSAEVTA 135
           ++    V+  G  P F L KW S   S        D + ++          +  S E  +
Sbjct: 90  QVTDQDVESLGSVPHFALSKWASKGGSRKGKDFSTDTDSEIGSPLSPQLRHRGVSEEKPS 149

Query: 136 ANNLSGLADDEDVQKERSKSLSVFGILISPKLRSTQLSFEKALETLIELANMRSSLIHSF 195
           A + + LA DE+++KER+KSLSVFG L+SPKLR  Q SFE ALETL+E+ANMR+S+I +F
Sbjct: 150 AKDETVLAADEEIKKERAKSLSVFGGLVSPKLRGAQQSFETALETLVEIANMRASMISAF 209

Query: 196 HQL 198
            ++
Sbjct: 210 ERI 212