Miyakogusa Predicted Gene

Lj1g3v3383540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3383540.1 Non Chatacterized Hit- tr|B9T4T9|B9T4T9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,39.01,2e-19,coiled-coil,NULL; DUF241,Protein of unknown function
DUF241, plant,gene.g34673.t1.1
         (166 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17070.1 | Symbols:  | Arabidopsis protein of unknown functio...   108   2e-24
AT2G17080.1 | Symbols:  | Arabidopsis protein of unknown functio...   103   4e-23
AT4G35200.1 | Symbols:  | Arabidopsis protein of unknown functio...   101   2e-22
AT4G35210.1 | Symbols:  | Arabidopsis protein of unknown functio...    97   4e-21
AT2G17680.1 | Symbols:  | Arabidopsis protein of unknown functio...    64   3e-11
AT4G35710.1 | Symbols:  | Arabidopsis protein of unknown functio...    57   7e-09
AT4G35690.1 | Symbols:  | Arabidopsis protein of unknown functio...    55   2e-08
AT1G76210.1 | Symbols:  | Arabidopsis protein of unknown functio...    49   2e-06

>AT2G17070.1 | Symbols:  | Arabidopsis protein of unknown function
           (DUF241) | chr2:7430863-7431654 REVERSE LENGTH=263
          Length = 263

 Score =  108 bits (270), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 63/166 (37%), Positives = 97/166 (58%), Gaps = 10/166 (6%)

Query: 1   MYELQSVIRRRRSEETGFKVEGAKYLASRKKLNKAIRKSLGNLKALKHECVEDGTFSMLR 60
           + E+QS++RR+R + +G   E  KYLASRK   K  +K   +LKA +    ED     L 
Sbjct: 108 LMEIQSILRRKRGDLSG---EVKKYLASRKSFKKTFQKVQKSLKAAQ---AEDNKDKSLA 161

Query: 61  ILKEVEQVTVSSLESMFMLICDQSKHRRWSTISKMLQPKRVACDSQESETNEFEKVDAAL 120
           +  E E VT++  +S+F  +       +WS +SK++  K++ C++QE   NEF KVD+  
Sbjct: 162 VFGEAEAVTIAMFDSLFSYMSGSKTCSKWSVVSKLMNKKKITCEAQE---NEFTKVDSEF 218

Query: 121 KSSSFEHFQSHVESLEMCIQDLEIGVEQLTRKLIRNRVTLLNIFNH 166
           +S      +  V+ LE CIQD E G+E L++ LI+ RV++LN F H
Sbjct: 219 QSEKTLKMED-VQILESCIQDFEDGLESLSKSLIKYRVSILNSFGH 263


>AT2G17080.1 | Symbols:  | Arabidopsis protein of unknown function
           (DUF241) | chr2:7433326-7434117 REVERSE LENGTH=263
          Length = 263

 Score =  103 bits (258), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 62/166 (37%), Positives = 94/166 (56%), Gaps = 10/166 (6%)

Query: 1   MYELQSVIRRRRSEETGFKVEGAKYLASRKKLNKAIRKSLGNLKALKHECVEDGTFSMLR 60
           + E+QS++RR+R +      E  KYL SRK L K+ +K   +LK  +    ED     L 
Sbjct: 108 LMEIQSILRRKRGD---LSEEVKKYLTSRKSLKKSFQKVQKSLKVTQ---AEDNNDDTLA 161

Query: 61  ILKEVEQVTVSSLESMFMLICDQSKHRRWSTISKMLQPKRVACDSQESETNEFEKVDAAL 120
           +  E E +T+S  +S+   +       +WS +SK++  K+V C++QE   NEF KVD+  
Sbjct: 162 VFGEAEAITLSLFDSLLSYMSGSKTCSKWSVVSKLMNKKKVTCEAQE---NEFTKVDSEF 218

Query: 121 KSSSFEHFQSHVESLEMCIQDLEIGVEQLTRKLIRNRVTLLNIFNH 166
           +S         V++LE CIQDLE G+E L++ LI+ RV+ LNI  H
Sbjct: 219 QSEKTLKMDD-VQNLESCIQDLEDGLESLSKSLIKYRVSFLNILGH 263


>AT4G35200.1 | Symbols:  | Arabidopsis protein of unknown function
           (DUF241) | chr4:16749142-16749903 REVERSE LENGTH=253
          Length = 253

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 98/163 (60%), Gaps = 10/163 (6%)

Query: 1   MYELQSVIRRRRSEETGFKVEGAKYLASRKKLNKAIRKSLGNLKALKHECVEDGTFSMLR 60
           + E+QS++RR+  + +G   E  KYL SRK L K+++K + +LK  + +   D T + L 
Sbjct: 101 LMEIQSILRRKPGDLSG---EVKKYLVSRKFLKKSLQKVIKSLKVCQSK---DSTNASLV 154

Query: 61  ILKEVEQVTVSSLESMFMLICDQSKHRRWSTISKMLQPKRVACDSQESETNEFEKVDAAL 120
           +    E VT++  ES+F  +       +WS +SKM+   +V C   E+E NEF ++D+  
Sbjct: 155 VFGRAEAVTMALFESLFSFMSGSKACGKWSLVSKMMSQNKVTC---EAEANEFTRIDSEF 211

Query: 121 KSSSFEHFQSHVESLEMCIQDLEIGVEQLTRKLIRNRVTLLNI 163
           +S      +  V++LE CIQDLE G+E L++ LI+ RV++LNI
Sbjct: 212 QSEKSLQME-DVQNLESCIQDLEDGIESLSKSLIKYRVSILNI 253


>AT4G35210.1 | Symbols:  | Arabidopsis protein of unknown function
           (DUF241) | chr4:16751428-16752180 FORWARD LENGTH=250
          Length = 250

 Score = 97.4 bits (241), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 94/163 (57%), Gaps = 13/163 (7%)

Query: 1   MYELQSVIRRRRSEETGFKVEGAKYLASRKKLNKAIRKSLGNLKALKHECVEDGTFSMLR 60
           + E+QS++RR+R +      E  KYLASRK L K+  K L +LK  +++   D     L 
Sbjct: 101 LKEIQSIVRRKRGD---LSAEVKKYLASRKFLKKSFEKVLKSLKTSQNK--NDA----LA 151

Query: 61  ILKEVEQVTVSSLESMFMLICDQSKHRRWSTISKMLQPKRVACDSQESETNEFEKVDAAL 120
           +  E E VT++  ES+F  +       +WS +SKM+   +  C   E+E NEF +VD   
Sbjct: 152 VFGEAETVTIALFESLFSFMSGSKACGKWSLVSKMMSQSKGTC---EAEANEFTRVDMEF 208

Query: 121 KSSSFEHFQSHVESLEMCIQDLEIGVEQLTRKLIRNRVTLLNI 163
           +S      +  V++LE+CIQDLE G+  L++ LI+ RV++LNI
Sbjct: 209 QSEKSLQME-DVQNLEICIQDLEDGIGSLSKSLIKYRVSILNI 250


>AT2G17680.1 | Symbols:  | Arabidopsis protein of unknown function
           (DUF241) | chr2:7679241-7680119 FORWARD LENGTH=292
          Length = 292

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 20/175 (11%)

Query: 4   LQSVIRRRRSEETGFKVEGAKYLASRKKLNKAIRKSLGNLKALK-------HECVEDGTF 56
           LQS +RRR+       V+ + Y+  RK + K ++K LG+LK +        H   +DG  
Sbjct: 124 LQSCVRRRKD------VDVSGYVGFRKNMRKEVKKLLGSLKNINVGLVMRDHGYDQDGDI 177

Query: 57  SMLRILKEVEQV---TVSSLESMFMLICD-QSKHRRWSTISKMLQPKRVACDSQESETNE 112
             L ++  + +V   TVS L+S F  +   Q+ +   S ++ +L  K+   D  +   NE
Sbjct: 178 HFLAVIHAMRRVVYMTVSVLKSFFEFLSGRQNGNDVRSKLALVLMNKKFH-DHDKMVKNE 236

Query: 113 FEKVDAALKSSSFEHFQSH--VESLEMCIQDLEIGVEQLTRKLIRNRVTLLNIFN 165
            E VD+A+   S  H   H  +E +E+ I   E  +E L R LI+ R +LLNI +
Sbjct: 237 LENVDSAICGDSISHDDLHEKLEEVEVWIGKFEKSLEGLFRGLIKTRASLLNIIS 291


>AT4G35710.1 | Symbols:  | Arabidopsis protein of unknown function
           (DUF241) | chr4:16925301-16926152 FORWARD LENGTH=283
          Length = 283

 Score = 56.6 bits (135), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 29/182 (15%)

Query: 4   LQSVIRRRRSEETG----FKVEGAKYLASRKKLNKAIRKSLGNLKALKHECVEDGTFSML 59
           +QS +RR++    G      V  + Y+  RK + K  +K LG+LK      V+ GT S  
Sbjct: 112 VQSYVRRKKVSGGGGGDKIDVAVSDYVGFRKNMRKEAKKLLGSLKK-----VDGGTRSCD 166

Query: 60  RILKEVEQVTV------------SSLESMFMLICDQSKHRRWSTI-SKMLQPKRVACDSQ 106
              ++ + V V              L+S   L+      RR S I SK+    ++  D+ 
Sbjct: 167 NDHEDEQLVAVIDRVRRVVSVSVVVLKSFLELLS-----RRKSNIKSKLASVLKMKKDNH 221

Query: 107 ESETNEFEKVDAALKSSSFEH--FQSHVESLEMCIQDLEIGVEQLTRKLIRNRVTLLNIF 164
               N  E +D+A+      H   Q+ +E +EMCI   E  +E L R+LIR R ++LNI 
Sbjct: 222 APAKNVLETLDSAIFGDFLSHDDLQNELEEVEMCIGGFERNLEGLFRRLIRTRASILNII 281

Query: 165 NH 166
           +H
Sbjct: 282 SH 283


>AT4G35690.1 | Symbols:  | Arabidopsis protein of unknown function
           (DUF241) | chr4:16921886-16922740 FORWARD LENGTH=284
          Length = 284

 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 27/181 (14%)

Query: 4   LQSVIRRRR--SEETGFKVEGAKYLASRKKLNKAIRKSLGNLKALKHECVEDGTFS---- 57
           +QS +RR++    E    V  A Y+  RK + K  ++ LG+LK +      DG  S    
Sbjct: 113 VQSCVRRKKVVGGEDQLDVAVAGYVGFRKNMRKEAKRLLGSLKNI------DGGLSSSSS 166

Query: 58  ------------MLRILKEVEQVTVSSLESMFMLICDQSKHRRWSTISKMLQPKRVACDS 105
                       ++  +++V  V+V+ L S    +  + +    S ++ +L+ K+V    
Sbjct: 167 VNNGEQEEHLVVVVDAMRQVVSVSVAVLRSFLEFLSGRRQSNIKSKLASVLKKKKV--HH 224

Query: 106 QESETNEFEKVDAALKSSSFEHFQSHVESLEMCIQDLEIGVEQLTRKLIRNRVTLLNIFN 165
            E   NE E +D  +  S  +  Q  +E +EM I   E  +E L R+LIR R +LLNI +
Sbjct: 225 VEETKNELENLDLEIFCSRND-LQKKLEEVEMSIDGFEKKLEGLFRRLIRTRASLLNIIS 283

Query: 166 H 166
           H
Sbjct: 284 H 284


>AT1G76210.1 | Symbols:  | Arabidopsis protein of unknown function
           (DUF241) | chr1:28595202-28595882 REVERSE LENGTH=226
          Length = 226

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 86/175 (49%), Gaps = 24/175 (13%)

Query: 1   MYELQSVIRRRRSEETGFKVEGAKYLASRKKLNKAIRKSLGNLKALKHE------CVEDG 54
           + +LQ  +R   S +   K+  A Y   + KL K   K L  LK +K         +E  
Sbjct: 67  LQDLQLTLRGNESSDVNEKI--AAYNRYKNKLKKETLKCLNCLKNMKGNEGRVAMPIEQN 124

Query: 55  TFSMLRILKEVEQVTVSSLESMFMLICDQSKHRRWS--TISKMLQPKR-VACDSQESETN 111
              +  +LKEV +V V+ +ES+F L C     +R S  ++S +   +     D +  ET 
Sbjct: 125 LLFVTEVLKEVRRVVVTMVESLFSLGCIPWLEKRSSKGSLSSIFSIRSSYLLDDEWDET- 183

Query: 112 EFEKVDAALKSSSFEHFQSHVESLEMCIQDLEIGVEQLTRKLIRNRVTLLNIFNH 166
                  A++S++     + +E+ E+ + +LEI +E + R+LI+ RV+LLNI  +
Sbjct: 184 -------AVQSAT-----TRLEAAEITVVELEIELESIFRRLIQTRVSLLNILTN 226