Miyakogusa Predicted Gene

Lj1g3v3381400.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3381400.1 tr|I1K753|I1K753_SOYBN Bifunctional dihydrofolate
reductase-thymidylate synthase OS=Glycine max GN=G,82.29,0,seg,NULL;
Dihydrofolate reductase-like,Dihydrofolate reductase-like domain;
Thymidylate synthase/dCM,CUFF.30578.1
         (328 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G16370.1 | Symbols: THY-1 | thymidylate synthase 1 | chr2:708...   333   9e-92
AT4G34570.1 | Symbols: THY-2 | thymidylate synthase 2 | chr4:165...   328   3e-90
AT2G21550.1 | Symbols:  | Bifunctional dihydrofolate reductase/t...   282   2e-76

>AT2G16370.1 | Symbols: THY-1 | thymidylate synthase 1 |
           chr2:7082038-7084333 REVERSE LENGTH=519
          Length = 519

 Score =  333 bits (854), Expect = 9e-92,   Method: Compositional matrix adjust.
 Identities = 164/266 (61%), Positives = 196/266 (73%), Gaps = 6/266 (2%)

Query: 63  QRTYQVVVAATKDMGIGKDGKLPWRLFTDLKFFKEITTATSDPGKKNAIVMGRKTWESIP 122
           QRTYQVVVAATK+MGIGKDGKLPW L TDLKFFK+IT  TSD  KKNA+VMGRKTWESIP
Sbjct: 19  QRTYQVVVAATKEMGIGKDGKLPWNLPTDLKFFKDITLTTSDSSKKNAVVMGRKTWESIP 78

Query: 123 LKYRPLPGRLNVVLTRSGSFDIGTAENVVICGSIXXXXXXXXXXPYCLSIEKVFVIGGGQ 182
           +KYRPL GRLNVVLTRSG FDI   ENVV C S+          PYCLSIE+VFVIGGG 
Sbjct: 79  IKYRPLSGRLNVVLTRSGGFDIANTENVVTCSSVDSALDLLAAPPYCLSIERVFVIGGGD 138

Query: 183 IFREVLNAPGCEAIHFTEIHASIECDTFMPPVDSTKYQLWYSSFPKVENDIRYSFATYVR 242
           I RE LN P C+AIH TEI  S++CDTF+P +D++ YQ W SSFP  EN +R+ F T+VR
Sbjct: 139 ILREALNRPSCDAIHLTEIDTSVDCDTFIPAIDTSVYQPWSSSFPVTENGLRFCFTTFVR 198

Query: 243 VQSSAAESLSQNTDPLFDNNSDSLKFEVQNFDFLPEMILQRHEEYMYLRLIQEIISEXXX 302
           V+SSA ES  ++      N S SL+F+ + F FLP+M+  +HEE++YL ++++IIS    
Sbjct: 199 VKSSADESSDES------NGSQSLQFDGKKFLFLPKMVFDQHEEFLYLNMVEDIISNGNV 252

Query: 303 XXXXXXXXXLSKFGCQMRFNLRRSFP 328
                    LSKFGCQM+FNLRRSFP
Sbjct: 253 KNDRTGTGTLSKFGCQMKFNLRRSFP 278


>AT4G34570.1 | Symbols: THY-2 | thymidylate synthase 2 |
           chr4:16511129-16514110 REVERSE LENGTH=565
          Length = 565

 Score =  328 bits (841), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 164/267 (61%), Positives = 190/267 (71%), Gaps = 6/267 (2%)

Query: 63  QRTYQVVVAATKDMGIGKDGKLPWRLFTDLKFFKEITTATSDPGKKNAIVMGRKTWESIP 122
           Q TYQVVVAATK+MGIGKDGKLPW L TDLKFFK++T +TSD  KKNA+VMGRKTWESIP
Sbjct: 63  QSTYQVVVAATKEMGIGKDGKLPWNLPTDLKFFKDLTLSTSDSAKKNAVVMGRKTWESIP 122

Query: 123 LKYRPLPGRLNVVLTRSGSFDIGTAENVVICGSIXXXXXXXXXXPYCLSIEKVFVIGGGQ 182
            KYRPL GRLNVVL+RS  FDI   ENVV C SI          P+ LSIEKVFVIGGG 
Sbjct: 123 KKYRPLSGRLNVVLSRSSGFDIANTENVVTCSSIDSALDLLAAPPFSLSIEKVFVIGGGD 182

Query: 183 IFREVLNAPGCEAIHFTEIHASIECDTFMPPVDSTKYQLWYSSFPKVENDIRYSFATYVR 242
           I RE LN P CEAIH TEI  SI+CDTF+P VD++ YQ W SSFP  EN +R+SF T+VR
Sbjct: 183 ILREALNKPSCEAIHITEIDTSIDCDTFIPTVDTSAYQPWCSSFPICENGLRFSFTTHVR 242

Query: 243 VQSSAAESLSQNTDPLFDNNSDSLKFEVQNF-DFLPEMILQRHEEYMYLRLIQEIISEXX 301
           V+SS+A   S  +D      S  L+ + + F   LP+MI  RHEEY+YL L++EIIS   
Sbjct: 243 VKSSSAGEASDESD-----GSKVLQVDWKKFSSVLPKMIFDRHEEYLYLNLVKEIISNGN 297

Query: 302 XXXXXXXXXXLSKFGCQMRFNLRRSFP 328
                     LSKFGCQM+FNLRR+FP
Sbjct: 298 LKDDRTGTGTLSKFGCQMKFNLRRNFP 324


>AT2G21550.1 | Symbols:  | Bifunctional dihydrofolate
           reductase/thymidylate synthase | chr2:9227209-9230189
           FORWARD LENGTH=492
          Length = 492

 Score =  282 bits (721), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 136/266 (51%), Positives = 181/266 (68%), Gaps = 13/266 (4%)

Query: 63  QRTYQVVVAATKDMGIGKDGKLPWRLFTDLKFFKEITTATSDPGKKNAIVMGRKTWESIP 122
           +R+YQVV+AAT+DMG+G D KLPW L ++ +FF+++TT TSDP K+NA +MGRK+WES P
Sbjct: 21  RRSYQVVIAATRDMGLGMDMKLPWDLPSEYQFFQDVTTRTSDPTKRNATIMGRKSWESTP 80

Query: 123 LKYRPLPGRLNVVLTRSGSFDIGTAENVVICGSIXXXXXXXXXXPYCLSIEKVFVIGGGQ 182
           L+ RPLPGRLN+VLT+S   +I   ENV++  S+          PY LSIEKVFVIGGG+
Sbjct: 81  LEIRPLPGRLNIVLTKSSCHNIAIDENVLVSSSMESALELLATEPYSLSIEKVFVIGGGE 140

Query: 183 IFREVLNAPGCEAIHFTEIHASIECDTFMPPVDSTKYQLWYSSFPKVENDIRYSFATYVR 242
           + R  +NA  C+AIH TEI  S+ CD F P VD++ Y+ WYSSFP VEN IRYSF TYVR
Sbjct: 141 LLRNYMNASICDAIHLTEIDISVPCDAFAPRVDTSLYRPWYSSFPVVENGIRYSFNTYVR 200

Query: 243 VQSSAAESLSQNTDPLFDNNSDSLKFEVQNFDFLPEMILQRHEEYMYLRLIQEIISEXXX 302
            + +   S  + +           + +++ + FLP+M+ +RHEE+ YL L+Q IIS    
Sbjct: 201 RKDAIVGSGEKKS---------VAESDLKEYSFLPKMVFERHEEFGYLNLVQNIISS--- 248

Query: 303 XXXXXXXXXLSKFGCQMRFNLRRSFP 328
                    LSKFGCQMRFNLR++FP
Sbjct: 249 -GDMNDNSTLSKFGCQMRFNLRKTFP 273