Miyakogusa Predicted Gene

Lj1g3v3370940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3370940.1 tr|G7J7R7|G7J7R7_MEDTR Neutrophil cytosol factor
OS=Medicago truncatula GN=MTR_3g117350 PE=4 SV=1,94.07,0,BAR/IMD
domain-like,NULL; SH3-domain,Src homology-3 domain; Src homology,Src
homology-3 domain; SH3_,CUFF.30551.1
         (371 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G34660.1 | Symbols:  | SH3 domain-containing protein | chr4:1...   598   e-171
AT4G34660.2 | Symbols:  | SH3 domain-containing protein | chr4:1...   573   e-164
AT4G34660.3 | Symbols:  | SH3 domain-containing protein | chr4:1...   484   e-137
AT4G18060.1 | Symbols:  | SH3 domain-containing protein | chr4:1...   375   e-104
AT1G31440.1 | Symbols:  | SH3 domain-containing protein | chr1:1...   309   2e-84
AT4G39020.1 | Symbols:  | SH3 domain-containing protein | chr4:1...   131   8e-31

>AT4G34660.1 | Symbols:  | SH3 domain-containing protein |
           chr4:16545595-16548294 REVERSE LENGTH=368
          Length = 368

 Score =  598 bits (1543), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 291/371 (78%), Positives = 325/371 (87%), Gaps = 3/371 (0%)

Query: 1   MDAIRKQASKLREQVARQQQAVLKQFGAGGYGGSDNMVTDEIELQQHQKLEKLYISTRAG 60
           MDAIRKQAS+LREQVARQQQAV KQFG GG     + + DE EL QHQKLEKLYISTRA 
Sbjct: 1   MDAIRKQASRLREQVARQQQAVFKQFGGGG---YGSGLADEAELNQHQKLEKLYISTRAA 57

Query: 61  KHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGAENTCTSGSTLSRAALNYARARAQ 120
           KHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYG+ENTCT+G+ L+RAALNY RARAQ
Sbjct: 58  KHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGSENTCTNGNVLTRAALNYGRARAQ 117

Query: 121 MEKERGNVLKALGTQVAEPLRAMVMGAPLEDARHLAQRYDRMRQDAEAQAIEVSKRQAKV 180
           MEKERGN+LKALGTQVAEPLRAMV+GAPLEDARHLAQRYDRMRQ+AEAQA EV++RQAK 
Sbjct: 118 MEKERGNMLKALGTQVAEPLRAMVLGAPLEDARHLAQRYDRMRQEAEAQATEVARRQAKA 177

Query: 181 RESPGNAENSMKLEAAEAKLQDLKSNMSILGKEXXXXXXXXXXXXXRLTLQRLIAMVEAE 240
           RES GN +  MKLE+AEAKL DLKSNM+ILGKE             +LTL+RL++MVE+E
Sbjct: 178 RESQGNPDILMKLESAEAKLHDLKSNMTILGKEAASALASVEDQQQKLTLERLLSMVESE 237

Query: 241 RAYHQRVLQILDHLEGEMISERQRIEAPPTPSVDNSMPPPPSYEDVNDVFASQAHNGSTD 300
           RAYHQRVLQILD LEGEM+SERQRIEAP TPS  +SMPPPPSYE+ N VFASQ H+ STD
Sbjct: 238 RAYHQRVLQILDQLEGEMVSERQRIEAPSTPSSADSMPPPPSYEEANGVFASQMHDTSTD 297

Query: 301 SMGYFLGEVLFPYHAESEVELNLSAGDYIVIRKVTNNGWAEGECKGRAGWFPFGYIERRE 360
           SMGYFLGEVLFPYH  ++VEL+LS G+Y+V+RKVT +GWAEGECKG+AGWFP+GYIERRE
Sbjct: 298 SMGYFLGEVLFPYHGVTDVELSLSTGEYVVVRKVTGSGWAEGECKGKAGWFPYGYIERRE 357

Query: 361 RVLASKVAEVF 371
           RVLASKV+EVF
Sbjct: 358 RVLASKVSEVF 368


>AT4G34660.2 | Symbols:  | SH3 domain-containing protein |
           chr4:16545595-16548294 REVERSE LENGTH=345
          Length = 345

 Score =  573 bits (1476), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 278/371 (74%), Positives = 310/371 (83%), Gaps = 26/371 (7%)

Query: 1   MDAIRKQASKLREQVARQQQAVLKQFGAGGYGGSDNMVTDEIELQQHQKLEKLYISTRAG 60
           MDAIRKQAS+LREQVARQQQ                          HQKLEKLYISTRA 
Sbjct: 1   MDAIRKQASRLREQVARQQQ--------------------------HQKLEKLYISTRAA 34

Query: 61  KHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGAENTCTSGSTLSRAALNYARARAQ 120
           KHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYG+ENTCT+G+ L+RAALNY RARAQ
Sbjct: 35  KHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGSENTCTNGNVLTRAALNYGRARAQ 94

Query: 121 MEKERGNVLKALGTQVAEPLRAMVMGAPLEDARHLAQRYDRMRQDAEAQAIEVSKRQAKV 180
           MEKERGN+LKALGTQVAEPLRAMV+GAPLEDARHLAQRYDRMRQ+AEAQA EV++RQAK 
Sbjct: 95  MEKERGNMLKALGTQVAEPLRAMVLGAPLEDARHLAQRYDRMRQEAEAQATEVARRQAKA 154

Query: 181 RESPGNAENSMKLEAAEAKLQDLKSNMSILGKEXXXXXXXXXXXXXRLTLQRLIAMVEAE 240
           RES GN +  MKLE+AEAKL DLKSNM+ILGKE             +LTL+RL++MVE+E
Sbjct: 155 RESQGNPDILMKLESAEAKLHDLKSNMTILGKEAASALASVEDQQQKLTLERLLSMVESE 214

Query: 241 RAYHQRVLQILDHLEGEMISERQRIEAPPTPSVDNSMPPPPSYEDVNDVFASQAHNGSTD 300
           RAYHQRVLQILD LEGEM+SERQRIEAP TPS  +SMPPPPSYE+ N VFASQ H+ STD
Sbjct: 215 RAYHQRVLQILDQLEGEMVSERQRIEAPSTPSSADSMPPPPSYEEANGVFASQMHDTSTD 274

Query: 301 SMGYFLGEVLFPYHAESEVELNLSAGDYIVIRKVTNNGWAEGECKGRAGWFPFGYIERRE 360
           SMGYFLGEVLFPYH  ++VEL+LS G+Y+V+RKVT +GWAEGECKG+AGWFP+GYIERRE
Sbjct: 275 SMGYFLGEVLFPYHGVTDVELSLSTGEYVVVRKVTGSGWAEGECKGKAGWFPYGYIERRE 334

Query: 361 RVLASKVAEVF 371
           RVLASKV+EVF
Sbjct: 335 RVLASKVSEVF 345


>AT4G34660.3 | Symbols:  | SH3 domain-containing protein |
           chr4:16545595-16548294 REVERSE LENGTH=317
          Length = 317

 Score =  484 bits (1247), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 250/371 (67%), Positives = 281/371 (75%), Gaps = 54/371 (14%)

Query: 1   MDAIRKQASKLREQVARQQQAVLKQFGAGGYGGSDNMVTDEIELQQHQKLEKLYISTRAG 60
           MDAIRKQAS+LREQVARQQQAV KQFG GG     + + DE EL QHQKLEKLYISTRA 
Sbjct: 1   MDAIRKQASRLREQVARQQQAVFKQFGGGG---YGSGLADEAELNQHQKLEKLYISTRAA 57

Query: 61  KHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGAENTCTSGSTLSRAALNYARARAQ 120
           KHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYG+ENTCT+G+ L+RAALNY RARAQ
Sbjct: 58  KHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGSENTCTNGNVLTRAALNYGRARAQ 117

Query: 121 MEKERGNVLKALGTQVAEPLRAMVMGAPLEDARHLAQRYDRMRQDAEAQAIEVSKRQAKV 180
           MEKERGN+LKALGTQVAEPLRAMV+GAPLEDARHLAQRYDRMRQ+AEAQA EV++RQAK 
Sbjct: 118 MEKERGNMLKALGTQVAEPLRAMVLGAPLEDARHLAQRYDRMRQEAEAQATEVARRQAKA 177

Query: 181 RESPGNAENSMKLEAAEAKLQDLKSNMSILGKEXXXXXXXXXXXXXRLTLQRLIAMVEAE 240
           RES GN +  MKLE+AEAKL DLKSNM+ILGKE             +LTL+RL++MVE+E
Sbjct: 178 RESQGNPDILMKLESAEAKLHDLKSNMTILGKEAASALASVEDQQQKLTLERLLSMVESE 237

Query: 241 RAYHQRVLQILDHLEGEMISERQRIEAPPTPSVDNSMPPPPSYEDVNDVFASQAHNGSTD 300
           RAYHQRVLQILD LEGE+                                          
Sbjct: 238 RAYHQRVLQILDQLEGEV------------------------------------------ 255

Query: 301 SMGYFLGEVLFPYHAESEVELNLSAGDYIVIRKVTNNGWAEGECKGRAGWFPFGYIERRE 360
                    LFPYH  ++VEL+LS G+Y+V+RKVT +GWAEGECKG+AGWFP+GYIERRE
Sbjct: 256 ---------LFPYHGVTDVELSLSTGEYVVVRKVTGSGWAEGECKGKAGWFPYGYIERRE 306

Query: 361 RVLASKVAEVF 371
           RVLASKV+EVF
Sbjct: 307 RVLASKVSEVF 317


>AT4G18060.1 | Symbols:  | SH3 domain-containing protein |
           chr4:10027668-10029662 REVERSE LENGTH=351
          Length = 351

 Score =  375 bits (962), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/373 (51%), Positives = 251/373 (67%), Gaps = 24/373 (6%)

Query: 1   MDAIRKQASKLREQVARQQQAVLKQFGAGGYGGSDNMVTDEIELQQHQKLEKLYISTRAG 60
           MDA R+QASKLR+QVA+QQ AV+KQF   GY  SD MV DE+E+Q+H +L+KLY STR+ 
Sbjct: 1   MDAFRRQASKLRDQVAKQQLAVIKQFSGTGYESSDVMVIDELEMQRHHQLDKLYRSTRSA 60

Query: 61  KHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGAENT-CTSGSTLSRAALNYARARA 119
           K +QRDIV+  E +   G + +E GTKLSED  +YG EN+     + L++AA  Y  AR 
Sbjct: 61  KEFQRDIVKAAEAFTTIGLRHIEAGTKLSEDCCRYGNENSQNIDENILAKAAAIYGDARK 120

Query: 120 QMEKERGNVLKALGTQVAEPLRAMVMGAPLEDARHLAQRYDRMRQDAEAQAIEVSKRQAK 179
            ++KE+ +  K L +QV +PLRAMV G+PLEDARHLAQRY RMRQ+AE  A EVS+RQA+
Sbjct: 121 HVDKEQEDFNKLLASQVLDPLRAMVAGSPLEDARHLAQRYSRMRQEAETHATEVSRRQAR 180

Query: 180 VRESPGNAENSMKLEAAEAKLQDLKSNMSILGKEXXXXXXXXXXXXXRLTLQRLIAMVEA 239
           VRE+P   EN  KL+ AEAK+Q+LK+NM++LGKE             RLT QRL+AMVE 
Sbjct: 181 VREAP-IPENVAKLQLAEAKMQELKANMAVLGKEATAALAAVESQQHRLTFQRLVAMVEG 239

Query: 240 ERAYHQRVLQILDHLEGEMISERQRIEAPPTPSVDNSMPPPPSYEDVNDVFASQAHNGST 299
           E+ YH R+  IL  +E EM++E+Q  E+ P        P  P+             NGS 
Sbjct: 240 EKNYHLRIAAILSDIEAEMVTEKQHKESAP--------PAIPT------------ENGS- 278

Query: 300 DSMGYFLGEVLFPYHAESEVELNLSAGDYIVIRKVTNNGWAEGECKGRAGWFPFGYIERR 359
           +   YFL EV+ P+ A SE EL+L  GDYIV+RKV+  GWAEGECKG+AGWFP  YIE+R
Sbjct: 279 EKTSYFLAEVIHPFSAASEKELDLDKGDYIVVRKVSQTGWAEGECKGKAGWFPMAYIEKR 338

Query: 360 ERVLASKV-AEVF 371
           +R+  +   AEV+
Sbjct: 339 QRLPTTNFAAEVY 351


>AT1G31440.1 | Symbols:  | SH3 domain-containing protein |
           chr1:11256150-11258479 REVERSE LENGTH=439
          Length = 439

 Score =  309 bits (791), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 180/437 (41%), Positives = 250/437 (57%), Gaps = 72/437 (16%)

Query: 1   MDAIRKQASKLREQVARQQQAVLKQFGAGGYGGSDNMVTDEIELQQHQKLEKLYISTRAG 60
           M+AIRKQA+KLREQVARQQQAVLK  G   +  +D +V DE EL  HQKL+ LY ST+A 
Sbjct: 1   MEAIRKQAAKLREQVARQQQAVLKHLG---HVNADAVVVDEEELHCHQKLQDLYSSTKAA 57

Query: 61  KHYQRDIVRGVEGYIVTGSKQVEIGTKLSEDSRKYGAENTCTSGSTLSRAALNYARARAQ 120
           K  QR+IVRG+EG+I TG+K VEIG K +ED +KYG EN   + + LSR A ++  +   
Sbjct: 58  KRLQRNIVRGLEGFIATGTKVVEIGLKFAEDFKKYGDENP-DANTPLSRVAHHFGTSYKS 116

Query: 121 MEKERGNVLKALGTQVAEPLRAMVMGAPLEDARHLAQRYDRMRQDAEAQAIEVSKRQAKV 180
           +E ER  +L  L  QV EP+R M+  APLEDARHL   YDR+RQ+ EAQA +V +R++K+
Sbjct: 117 VEGERETLLGVLSEQVCEPIRTMIYSAPLEDARHLVNHYDRLRQEVEAQATDVLRRRSKL 176

Query: 181 RESPGNAENSMKLEAAEAKLQDLKSNMSILGKEXXXXXXXXXXXXXRLTLQRLIAMVEAE 240
           +ES  + E  +KL+ +E++L +LKS+M  LGKE              +T QRL A+VEAE
Sbjct: 177 KESDISEEAYIKLKNSESRLAELKSSMKTLGKEATKAMLEVDDQQQNVTSQRLRALVEAE 236

Query: 241 RAYHQRVLQILDHLEGEMISE--------------------------------------- 261
           R+YH+  L ILD L  EMI+E                                       
Sbjct: 237 RSYHRNALDILDKLHSEMIAEEEAIGSSPKSLPLHIEDSASLPQQEPNSNSSGEIKSNPL 296

Query: 262 -------RQRIEAPP----TPSVDNSMPPPPSYEDVND----VFAS-----QAHNGSTDS 301
                  R+ I++ P     PS  + M   P  E  ++    + +S     +  NGS D 
Sbjct: 297 GKIKASRREEIKSNPQEVTKPSPKDEMKSSPQEETKSNHQKEIKSSPQEEIKKSNGSDDH 356

Query: 302 MG---------YFLGEVLFPYHAESEVELNLSAGDYIVIRKVTNNGWAEGECKGRAGWFP 352
                      YFL +V+ P+ A++  EL+L+  DY+++R+V   GW+EGE KG+AGWFP
Sbjct: 357 HNHQLLSQNDSYFLAKVVHPFDAQAPGELSLAVDDYVIVRQVAGTGWSEGEYKGKAGWFP 416

Query: 353 FGYIERRERVLASKVAE 369
             Y+E++E+  ASK+ E
Sbjct: 417 SAYVEKQEKAPASKIVE 433


>AT4G39020.1 | Symbols:  | SH3 domain-containing protein |
           chr4:18182315-18184340 FORWARD LENGTH=169
          Length = 169

 Score =  131 bits (329), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 56/81 (69%), Positives = 70/81 (86%)

Query: 291 ASQAHNGSTDSMGYFLGEVLFPYHAESEVELNLSAGDYIVIRKVTNNGWAEGECKGRAGW 350
           ASQ HNG++D+MGYFLGEV+FPY A+S+ EL+LS GDY+VIR+V ++ WAEGECKG AGW
Sbjct: 89  ASQMHNGTSDAMGYFLGEVMFPYQADSDFELSLSVGDYVVIREVVSSVWAEGECKGNAGW 148

Query: 351 FPFGYIERRERVLASKVAEVF 371
           F + YIERR+RV A+KV EVF
Sbjct: 149 FTYIYIERRDRVFATKVIEVF 169