Miyakogusa Predicted Gene

Lj1g3v3354060.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3354060.1 Non Chatacterized Hit- tr|I3SKX0|I3SKX0_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,92.8,0,Thioredoxin-like,Thioredoxin-like fold; seg,NULL;
PHOSDUCIN-LIKE PROTEIN 2, 3 (VIRAL IAP-ASSOCIATED ,CUFF.30514.1
         (250 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14240.1 | Symbols:  | Thioredoxin superfamily protein | chr5...   321   2e-88

>AT5G14240.1 | Symbols:  | Thioredoxin superfamily protein |
           chr5:4596223-4597568 REVERSE LENGTH=256
          Length = 256

 Score =  321 bits (823), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 155/249 (62%), Positives = 192/249 (77%), Gaps = 3/249 (1%)

Query: 1   MADYHFVYKDLEGASTQWDDIQRKLGNLXXXXXXXXXXXXXXXXXXXTLPKDKDWLDSKT 60
           MADYHFVYKD+EGASTQWDDIQRKLGNL                   + PKD+ W D KT
Sbjct: 1   MADYHFVYKDIEGASTQWDDIQRKLGNLPEKAPAFKPPAYTPAEDESSAPKDQAWFDKKT 60

Query: 61  QXXXXXXXXXXXXX--RFLQEYRKKRLAEIQETAKVLRFGSVTPISGSDFIREVSQAPSD 118
           +               RFL+EYRKKRL+E++E AKV R+G+VTPISGSDF+REV+QA ++
Sbjct: 61  EEELEDLEDDKDLDDDRFLEEYRKKRLSELREAAKVKRYGTVTPISGSDFVREVTQASAE 120

Query: 119 VWVVVILYKEGIPECVLLMQSIEELAARYPATKFVKIISTDCIPNYPDRNLPTLLVYNNG 178
            WVVV LYK+G+ EC LL+  ++EL +RYPATKFVKIISTDCIPNYPD NLPTLLVY++G
Sbjct: 121 DWVVVCLYKDGVAECSLLLGCLDELGSRYPATKFVKIISTDCIPNYPDCNLPTLLVYHHG 180

Query: 179 AVKGNYVGLHSFGRRCTPEGVALVLCQSDPVLNDGQSG-NEQSREAVIEGVRKRFIEKVV 237
           A+KG +VGL SFGRRCTPE VAL+LCQS+PVLNDG+ G ++ SREAV+ GVR++FIE+VV
Sbjct: 181 AIKGTHVGLKSFGRRCTPESVALLLCQSEPVLNDGKGGDDDSSREAVMAGVRRQFIERVV 240

Query: 238 LDHEEQEDD 246
            DHE++++D
Sbjct: 241 KDHEDKDND 249