Miyakogusa Predicted Gene
- Lj1g3v3354000.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3354000.1 Non Chatacterized Hit- tr|K4AIS8|K4AIS8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si038790,24.39,2e-18,PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; no
description,Tetratricopeptide-like,CUFF.30509.1
(468 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 277 1e-74
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 1e-71
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 255 5e-68
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 254 9e-68
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 251 7e-67
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 250 1e-66
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 2e-66
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 249 2e-66
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 249 3e-66
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 247 1e-65
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 2e-65
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 2e-65
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 5e-65
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 1e-64
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 243 2e-64
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 242 5e-64
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 6e-64
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 240 1e-63
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 238 5e-63
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 238 6e-63
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 236 3e-62
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 6e-62
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 1e-61
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 234 1e-61
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 234 1e-61
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 234 1e-61
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 233 2e-61
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 2e-61
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 5e-61
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 7e-61
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 231 8e-61
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 230 1e-60
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 230 2e-60
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 2e-60
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 3e-60
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 6e-60
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 6e-60
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 7e-60
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 9e-60
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 1e-59
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 227 1e-59
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 227 2e-59
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 4e-59
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 5e-59
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 225 5e-59
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 225 5e-59
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 6e-59
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 225 7e-59
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 7e-59
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 7e-59
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 224 1e-58
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 223 2e-58
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 222 4e-58
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 4e-58
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 222 4e-58
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 9e-58
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 1e-57
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 220 2e-57
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 218 9e-57
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 1e-56
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 217 1e-56
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 217 2e-56
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 216 3e-56
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 3e-56
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 216 4e-56
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 6e-56
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 7e-56
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 8e-56
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 8e-56
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 9e-56
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 213 2e-55
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 3e-55
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 4e-55
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 212 5e-55
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 211 6e-55
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 8e-55
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 2e-54
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 209 5e-54
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 209 5e-54
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 6e-54
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 208 8e-54
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 207 9e-54
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 2e-53
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 206 2e-53
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 4e-53
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 5e-53
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 205 7e-53
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 8e-53
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 8e-53
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 204 9e-53
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 203 2e-52
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 2e-52
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 3e-52
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 7e-52
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 7e-52
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 201 1e-51
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 1e-51
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 1e-51
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 3e-51
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 3e-51
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 197 1e-50
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 4e-50
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 4e-50
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 6e-50
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 195 7e-50
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 194 1e-49
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 2e-49
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 192 3e-49
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 4e-49
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 5e-49
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 192 6e-49
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 6e-49
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 8e-49
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 1e-48
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 3e-48
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 5e-48
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 7e-48
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 8e-48
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 8e-48
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 187 1e-47
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 1e-47
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 2e-47
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 187 2e-47
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 3e-47
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 4e-47
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 4e-47
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 186 4e-47
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 180 2e-45
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 2e-45
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 179 5e-45
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 5e-45
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 7e-45
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 174 1e-43
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 6e-43
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 171 1e-42
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 171 1e-42
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 3e-42
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 3e-42
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 169 4e-42
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 168 8e-42
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 168 8e-42
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 167 1e-41
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 2e-41
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 166 3e-41
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 5e-41
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 6e-41
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 164 2e-40
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 1e-39
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 4e-38
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 4e-38
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 5e-38
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 151 7e-37
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 8e-34
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 1e-33
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 5e-33
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 2e-18
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 85 1e-16
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 79 6e-15
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 1e-14
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 76 4e-14
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 4e-14
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 75 1e-13
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 5e-13
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 73 6e-13
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 6e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 70 4e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 67 4e-11
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 66 4e-11
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 66 5e-11
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 8e-11
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 65 8e-11
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 65 1e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 5e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 5e-10
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 6e-10
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 62 7e-10
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 62 7e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 62 7e-10
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 1e-09
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 62 1e-09
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 59 5e-09
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 59 5e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 6e-09
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 59 7e-09
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 59 8e-09
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 3e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 57 4e-08
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 56 5e-08
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 56 6e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 6e-08
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 7e-08
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 8e-08
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 9e-08
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 50 4e-06
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 49 8e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/468 (34%), Positives = 259/468 (55%), Gaps = 22/468 (4%)
Query: 2 SNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDL--HTNLIAAYATCLPKNHLQT 59
S + L C +L + +H + R G F D+ LIA YA C +T
Sbjct: 119 SFTFPHLLKACSGLSHLQMGRFVHAQVFRLG---FDADVFVQNGLIALYAKCRRLGSART 175
Query: 60 LHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSR 119
+ T + + I+S + + G P AL FS M +V D AL S L A +
Sbjct: 176 VFEGLPLPERT-IVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTC 234
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANAL 179
+ D+ G+ IHA V K+G + +L +Y+K V A ++FD++ N + NA+
Sbjct: 235 LQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAM 294
Query: 180 LSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTH 239
+SGY + G + +++ +M ++ D ++++A+ AC + ++E R ++ YV R+
Sbjct: 295 ISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRS-- 352
Query: 240 DIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKY 299
D DVF+ S+LI+M+ KCG V+ A+ VF RDVV+W++M+ YG +G+
Sbjct: 353 DYRDDVFISSALIDMFAKCGSVEGARLVFD-------RTLDRDVVVWSAMIVGYGLHGRA 405
Query: 300 KEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSC 359
+E I L++ M G+ P+ + FL ++ AC H+G V G +F M++ K+NP +HY+C
Sbjct: 406 REAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMADH-KINPQQQHYAC 464
Query: 360 LVDLLCRAGELQKAWELLN-QTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALE 418
++DLL RAG L +A+E++ + G +++WGALL+AC ++ELG+ A Q+
Sbjct: 465 VIDLLGRAGHLDQAYEVIKCMPVQPG-----VTVWGALLSACKKHRHVELGEYAAQQLFS 519
Query: 419 LDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+DP N G + LSNLYA +WD + +RV +KE+GL KDVGCSWV+V
Sbjct: 520 IDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEV 567
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/382 (28%), Positives = 193/382 (50%), Gaps = 23/382 (6%)
Query: 19 SAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVI 78
+ +K++H LL G L F L T LI A ++ + F + +N I
Sbjct: 35 AQLKQIHARLLVLG-LQFSGFLITKLIHASSSF---GDITFARQVFDDLPRPQIFPWNAI 90
Query: 79 ISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGW 138
I + R AL +S M V D++ L A S ++ + G+ +HA V +LG+
Sbjct: 91 IRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGF 150
Query: 139 SSSVFVGSALVDLYSKLSSVKDAALVFD--EIPEKNTVCANALLSGYGEAGLWAQGLELV 196
+ VFV + L+ LY+K + A VF+ +PE+ V A++S Y + G + LE+
Sbjct: 151 DADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 197 RKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYG 256
+M + +K D L + L A T L ++ GR +H+ V++ +IE D+ + SL MY
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYA 268
Query: 257 KCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRP 316
KCG V A+ +F D ++S N ++LW +M+ Y +NG +E ID+F EM+ + +RP
Sbjct: 269 KCGQVATAKILF--DKMKSPN-----LILWNAMISGYAKNGYAREAIDMFHEMINKDVRP 321
Query: 317 DGIAFLTVISACGHTGQVHAGVKYFESMS-NEFKLNPGPEHYSCLVDLLCRAGELQKAWE 375
D I+ + ISAC G + +E + ++++ + S L+D+ + G ++ A
Sbjct: 322 DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFIS--SALIDMFAKCGSVEGARL 379
Query: 376 LLNQTLYKGMGNCTISMWGALL 397
+ ++TL + + +W A++
Sbjct: 380 VFDRTLDR-----DVVVWSAMI 396
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 138/278 (49%), Gaps = 13/278 (4%)
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
KQIHA + LG S F+ + L+ S + A VFD++P NA++ GY
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
+ L + M + R+ D FT L+AC+GLS +++GR +H+ V R D +DVF
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFD--ADVF 155
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
+Q+ LI +Y KC + A+ VF E R +V WT+++ Y +NG+ E +++F
Sbjct: 156 VQNGLIALYAKCRRLGSARTVF-----EGLPLPERTIVSWTAIVSAYAQNGEPMEALEIF 210
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
+M + ++PD +A ++V++A + G S+ + L P+ L + +
Sbjct: 211 SQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVV-KMGLEIEPDLLISLNTMYAK 269
Query: 367 AGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG 404
G++ A + L+ M + + +W A+++ G
Sbjct: 270 CGQVATA-----KILFDKMKSPNLILWNAMISGYAKNG 302
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 138/417 (33%), Positives = 240/417 (57%), Gaps = 13/417 (3%)
Query: 50 TCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYA 109
TC+ + ++ F+ M + + +N II+ + + G AL M T ++ D++
Sbjct: 185 TCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFT 244
Query: 110 LCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIP 169
L S L S DV GK+IH +V + G S V++GS+LVD+Y+K + ++D+ VF +
Sbjct: 245 LSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLY 304
Query: 170 EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQ 229
++ + N+L++GY + G + + L L R+M ++K S+ + AC L+ + LG+Q
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 230 LHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSM 289
LH YVLR S++F+ S+L++MY KCG +K A+++F V D V WT++
Sbjct: 365 LHGYVLRG--GFGSNIFIASALVDMYSKCGNIKAARKIFDRMNV-------LDEVSWTAI 415
Query: 290 LGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFK 349
+ + +G E + LF+EM +G++P+ +AF+ V++AC H G V YF SM+ +
Sbjct: 416 IMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYG 475
Query: 350 LNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELG 409
LN EHY+ + DLL RAG+L++A+ +++ + G S+W LL++C N+EL
Sbjct: 476 LNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTG----SVWSTLLSSCSVHKNLELA 531
Query: 410 KLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+ ++ +D N G +L+ N+YA G W E+ LR+ ++++GLRK CSW+++
Sbjct: 532 EKVAEKIFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEM 588
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 188/406 (46%), Gaps = 63/406 (15%)
Query: 16 KNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHF 75
K+ S K+LH +RT +L HT+ + L FK + S L +
Sbjct: 19 KSKSQAKQLHAQFIRTQSLS-----HTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAW 73
Query: 76 NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
+I F + AL +F M + D S L + + + D+ FG+ +H + +
Sbjct: 74 KSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVR 133
Query: 136 LGWSSSVFVGSALVDLYSKL---SSVKDAALVFDEIPE---------------------- 170
LG ++ G+AL+++Y+KL S VFDE+P+
Sbjct: 134 LGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGID 193
Query: 171 -----------KNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACT 219
K+ V N +++GY ++G++ L +VR+M LK D FTLS+ L +
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS 253
Query: 220 GLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNER 279
V G+++H YV+R I+SDV++ SSL++MY K ++ +++VF
Sbjct: 254 EYVDVIKGKEIHGYVIRK--GIDSDVYIGSSLVDMYAKSARIEDSERVFS-------RLY 304
Query: 280 SRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK 339
RD + W S++ Y +NG+Y E + LF++M+ ++P +AF +VI AC H +H G +
Sbjct: 305 CRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQ 364
Query: 340 YFESM------SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQ 379
+ SN F S LVD+ + G ++ A ++ ++
Sbjct: 365 LHGYVLRGGFGSNIFIA-------SALVDMYSKCGNIKAARKIFDR 403
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 259 bits (662), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/463 (32%), Positives = 252/463 (54%), Gaps = 19/463 (4%)
Query: 7 QFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKC 66
LH C K+L K+ +L +L L + LI ++ C L F
Sbjct: 136 DLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLSKLITLFSVC---RRLDLARKIFDD 192
Query: 67 MNSTNPLHFNV---IISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
+ ++ L V + + R G P AL + M + + +++ L A + D+
Sbjct: 193 VTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDL 252
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
G+ IHA + K V + L+ LY + DA VFD + E+N V N+L+S
Sbjct: 253 RVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVL 312
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+ + L RKM + + TL+ L AC+ ++A+ G+++H+ +L++ +
Sbjct: 313 SKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE--KP 370
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
DV L +SL++MYGKCG V+ +++VF + ++D+ W ML Y NG +EVI
Sbjct: 371 DVPLLNSLMDMYGKCGEVEYSRRVFDV-------MLTKDLASWNIMLNCYAINGNIEEVI 423
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
+LF+ M+E G+ PDGI F+ ++S C TG G+ FE M EF+++P EHY+CLVD+
Sbjct: 424 NLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDI 483
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHN 423
L RAG++++A +++ +K + S+WG+LLN+C GN+ +G++A + L+PHN
Sbjct: 484 LGRAGKIKEAVKVIETMPFKP----SASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHN 539
Query: 424 AGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
G +++SN+YA MWD + +R ++K+RG++K+ GCSWVQV
Sbjct: 540 PGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQV 582
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 141/452 (31%), Positives = 251/452 (55%), Gaps = 18/452 (3%)
Query: 16 KNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHF 75
+NL K++H ++R + L + LI AY C + N F NS + + F
Sbjct: 354 ENLEYCKQIHCYIMRHSISLDIF-LTSALIDAYFKC---RGVSMAQNIFSQCNSVDVVVF 409
Query: 76 NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
+IS + G +L F ++ + + L S L + + G+++H + K
Sbjct: 410 TAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIK 469
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLEL 195
G+ + +G A++D+Y+K + A +F+ + +++ V N++++ ++ + +++
Sbjct: 470 KGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDI 529
Query: 196 VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
R+M V + YD ++SAAL AC L + G+ +H ++++ H + SDV+ +S+LI+MY
Sbjct: 530 FRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK--HSLASDVYSESTLIDMY 587
Query: 256 GKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEE-GI 314
KCG +K A VFK + +++V W S++ G +GK K+ + LF EM+E+ GI
Sbjct: 588 AKCGNLKAAMNVFK-------TMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGI 640
Query: 315 RPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAW 374
RPD I FL +IS+C H G V GV++F SM+ ++ + P EHY+C+VDL RAG L +A+
Sbjct: 641 RPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAY 700
Query: 375 ELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLY 434
E + + +WG LL AC N+EL ++A + ++LDP N+G +L+SN +
Sbjct: 701 ETVKSMPFPP----DAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAH 756
Query: 435 ARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
A W+ + +R ++KER ++K G SW+++
Sbjct: 757 ANAREWESVTKVRSLMKEREVQKIPGYSWIEI 788
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 185/385 (48%), Gaps = 19/385 (4%)
Query: 23 KLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNF 82
+LHG ++ +G + F + +L++ Y+ C F+ M+ + + +N +IS +
Sbjct: 260 QLHGLVVVSG-VDFEGSIKNSLLSMYSKC---GRFDDASKLFRMMSRADTVTWNCMISGY 315
Query: 83 CRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSV 142
+ G +LT F M ++ V D S L + S+ ++ + KQIH ++ + S +
Sbjct: 316 VQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDI 375
Query: 143 FVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVL 202
F+ SAL+D Y K V A +F + + V A++SGY GL+ LE+ R + +
Sbjct: 376 FLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKV 435
Query: 203 RLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVK 262
++ ++ TL + L L A++LGR+LH ++++ D ++ ++I+MY KCG +
Sbjct: 436 KISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNI--GCAVIDMYAKCGRMN 493
Query: 263 KAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFL 322
A ++F+ RD+V W SM+ ++ ID+F++M GI D ++
Sbjct: 494 LAYEIFE-------RLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSIS 546
Query: 323 TVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLY 382
+SAC + G K + L S L+D+ + G L+ A ++
Sbjct: 547 AALSACANLPSESFG-KAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAA-----MNVF 600
Query: 383 KGMGNCTISMWGALLNACVDCGNIE 407
K M I W +++ AC + G ++
Sbjct: 601 KTMKEKNIVSWNSIIAACGNHGKLK 625
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 169/367 (46%), Gaps = 24/367 (6%)
Query: 42 TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN 101
++LI AY L + F + + + +NV+++ + + G + FS M +
Sbjct: 177 SSLIKAY---LEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMD 233
Query: 102 NVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
+ + L+ + ++ G Q+H V G + ++L+ +YSK DA
Sbjct: 234 QISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDA 293
Query: 162 ALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGL 221
+ +F + +TV N ++SGY ++GL + L +M + D T S+ L + +
Sbjct: 294 SKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKF 353
Query: 222 SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR 281
+E +Q+H Y++R H I D+FL S+LI+ Y KC V AQ +F S
Sbjct: 354 ENLEYCKQIHCYIMR--HSISLDIFLTSALIDAYFKCRGVSMAQNIFS-------QCNSV 404
Query: 282 DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK-- 339
DVV++T+M+ Y NG Y + +++F+ +++ I P+ I ++++ G + G +
Sbjct: 405 DVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELH 464
Query: 340 -YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLN 398
+ + + N G ++D+ + G + A+E +++ + I W +++
Sbjct: 465 GFIIKKGFDNRCNIG----CAVIDMYAKCGRMNLAYE-----IFERLSKRDIVSWNSMIT 515
Query: 399 ACVDCGN 405
C N
Sbjct: 516 RCAQSDN 522
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 117/254 (46%), Gaps = 11/254 (4%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N IIS+F R G AL + M V D + A + + + V
Sbjct: 106 WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVS 165
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
LG + FV S+L+ Y + + + +FD + +K+ V N +L+GY + G ++
Sbjct: 166 SLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIK 225
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
M + ++ + T L C ++LG QLH V+ + D E + ++SL+ M
Sbjct: 226 GFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI--KNSLLSM 283
Query: 255 YGKCGLVKKAQQVFKLDGVESRNERSR-DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
Y KCG A ++F++ SR D V W M+ Y ++G +E + F EM+ G
Sbjct: 284 YSKCGRFDDASKLFRM--------MSRADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 314 IRPDGIAFLTVISA 327
+ PD I F +++ +
Sbjct: 336 VLPDAITFSSLLPS 349
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 98/228 (42%), Gaps = 11/228 (4%)
Query: 114 LTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNT 173
L A S N + GKQ+HA + S + ++ +Y+ S D +F + + +
Sbjct: 42 LQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRRS 101
Query: 174 VCA--NALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLH 231
N+++S + GL Q L KM + D T ++AC L + L
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 232 SYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
V ++ ++ + F+ SSLI+ Y + G + ++F D V +D V+W ML
Sbjct: 162 DTV--SSLGMDCNEFVASSLIKAYLEYGKIDVPSKLF--DRV-----LQKDCVIWNVMLN 212
Query: 292 VYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK 339
Y + G VI F M + I P+ + F V+S C + GV+
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQ 260
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 88/198 (44%), Gaps = 15/198 (7%)
Query: 211 LSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF-K 269
LS L+AC+ + + G+Q+H++++ + I D + ++ MY CG ++F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLI--VNSISGDSYTDERILGMYAMCGSFSDCGKMFYR 95
Query: 270 LDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG 329
LD R + W S++ + RNG + + + +ML G+ PD F ++ AC
Sbjct: 96 LD------LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACV 149
Query: 330 HTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCT 389
G+ + + ++ S L+ G++ +L ++ L K +C
Sbjct: 150 ALKNFK-GIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK---DCV 205
Query: 390 ISMWGALLNACVDCGNIE 407
I W +LN CG ++
Sbjct: 206 I--WNVMLNGYAKCGALD 221
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 255 bits (652), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 143/460 (31%), Positives = 258/460 (56%), Gaps = 19/460 (4%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCM 67
L+ C + L +++H ++++T L + L T L+ Y C + L+ M
Sbjct: 58 LLNACLDKRALRDGQRVHAHMIKTRYLPATY-LRTRLLIFYGKC---DCLEDARKVLDEM 113
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGK 127
N + + +IS + + G ALT F+ M ++ + + + LT+ R + + GK
Sbjct: 114 PEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGK 173
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
QIH + K + S +FVGS+L+D+Y+K +K+A +F+ +PE++ V A+++GY + G
Sbjct: 174 QIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLG 233
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
L + LE+ ++ + + T ++ L A +GL+ ++ G+Q H +VLR ++ L
Sbjct: 234 LDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLR--RELPFYAVL 291
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
Q+SLI+MY KCG + A+++F N R + W +ML Y ++G +EV++LF+
Sbjct: 292 QNSLIDMYSKCGNLSYARRLFD-------NMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 308 EMLEEG-IRPDGIAFLTVISACGHTGQVHAGVKYFESM-SNEFKLNPGPEHYSCLVDLLC 365
M +E ++PD + L V+S C H G+ F+ M + E+ PG EHY C+VD+L
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLG 404
Query: 366 RAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAG 425
RAG + +A+E + + K T + G+LL AC ++++G+ G+R +E++P NAG
Sbjct: 405 RAGRIDEAFEFIKRMPSKP----TAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAG 460
Query: 426 ICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
++LSNLYA G W ++ ++R ++ ++ + K+ G SW+Q
Sbjct: 461 NYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 97/189 (51%), Gaps = 22/189 (11%)
Query: 212 SAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLD 271
A L AC A+ G+++H+++++T + +L++ L+ YGKC ++ A++V LD
Sbjct: 56 DALLNACLDKRALRDGQRVHAHMIKTRY--LPATYLRTRLLIFYGKCDCLEDARKV--LD 111
Query: 272 GVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC--- 328
+ +N VV WT+M+ Y + G E + +F EM+ +P+ F TV+++C
Sbjct: 112 EMPEKN-----VVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA 166
Query: 329 ---GHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGM 385
G Q+H + + S+ F S L+D+ +AG++++A E+ + +
Sbjct: 167 SGLGLGKQIHGLIVKWNYDSHIFV-------GSSLLDMYAKAGQIKEAREIFECLPERDV 219
Query: 386 GNCTISMWG 394
+CT + G
Sbjct: 220 VSCTAIIAG 228
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 254 bits (649), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 137/406 (33%), Positives = 224/406 (55%), Gaps = 18/406 (4%)
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
F+ M + + + +I + G A+ F M + +D Y S L A +
Sbjct: 226 QLFRGMEK-DSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLG 284
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
+N GKQIHA + + + ++VGSAL+D+Y K + A VFD + +KN V A++
Sbjct: 285 AINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVV 344
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
GYG+ G + +++ M + D +TL A+ AC +S++E G Q H + T +
Sbjct: 345 GYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAI--TSGL 402
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS-RDVVLWTSMLGVYGRNGKYK 300
V + +SL+ +YGKCG + + ++F NE + RD V WT+M+ Y + G+
Sbjct: 403 IHYVTVSNSLVTLYGKCGDIDDSTRLF--------NEMNVRDAVSWTAMVSAYAQFGRAV 454
Query: 301 EVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL 360
E I LF +M++ G++PDG+ VISAC G V G +YF+ M++E+ + P HYSC+
Sbjct: 455 ETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCM 514
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISM-WGALLNACVDCGNIELGKLAGQRALEL 419
+DL R+G L++A +N GM ++ W LL+AC + GN+E+GK A + +EL
Sbjct: 515 IDLFSRSGRLEEAMRFIN-----GMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL 569
Query: 420 DPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
DPH+ LLS++YA G WD + LR ++E+ ++K+ G SW++
Sbjct: 570 DPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIK 615
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 114/422 (27%), Positives = 195/422 (46%), Gaps = 78/422 (18%)
Query: 21 IKKLHGNLLRTGTLFFLHDLHTNLIAAYATC------------LPKNHLQTLHNF----- 63
+K +HGN++R + L+ N++ AYA +P+ +L + +N
Sbjct: 25 VKMIHGNIIRA-LPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYS 83
Query: 64 -----------FKCMNSTNPLHFNVIISNFCRKGFPFLALTAF-SFMHTNNVPLDTYALC 111
F+ + + + +NV+I + G A+ A+ + M + L L
Sbjct: 84 KAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLM 143
Query: 112 STLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK 171
+ L SS V+ GKQIH V KLG+ S + VGS L+ +Y+ + + DA VF + ++
Sbjct: 144 TMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDR 203
Query: 172 NTVCAN------------------------------ALLSGYGEAGLWAQGLELVRKMPV 201
NTV N A++ G + GL + +E R+M V
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKV 263
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
LK DQ+ + L AC GL A+ G+Q+H+ ++RT + + +++ S+LI+MY KC +
Sbjct: 264 QGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT--NFQDHIYVGSALIDMYCKCKCL 321
Query: 262 KKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAF 321
A+ VF D ++ +N VV WT+M+ YG+ G+ +E + +F +M GI PD
Sbjct: 322 HYAKTVF--DRMKQKN-----VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 322 LTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY----SCLVDLLCRAGELQKAWELL 377
ISAC + + G ++ + G HY + LV L + G++ + L
Sbjct: 375 GQAISACANVSSLEEGSQFHGK-----AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLF 429
Query: 378 NQ 379
N+
Sbjct: 430 NE 431
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/375 (24%), Positives = 157/375 (41%), Gaps = 75/375 (20%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
K++H ++RT ++ + + LI Y C ++ +T+ F M N + + ++
Sbjct: 290 KQIHACIIRTNFQDHIY-VGSALIDMYCKCKCLHYAKTV---FDRMKQKNVVSWTAMVVG 345
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
+ + G A+ F M + + D Y L ++A + V+ + G Q H G
Sbjct: 346 YGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHY 405
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV 201
V V ++LV LY K + D+ +F+E+ ++ V A++S Y + G + ++L KM
Sbjct: 406 VTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQ 465
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
LK D TL+ + AC+ + GLV
Sbjct: 466 HGLKPDGVTLTGVISACS-------------------------------------RAGLV 488
Query: 262 KKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE--MLEEGIR---- 315
+K Q+ FK L TS G+ G Y +IDLF LEE +R
Sbjct: 489 EKGQRYFK---------------LMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFING 533
Query: 316 ----PDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNP-GPEHYSCLVDLLCRAGEL 370
PD I + T++SAC + G + G ES+ +L+P P Y+ L + G+
Sbjct: 534 MPFPPDAIGWTTLLSACRNKGNLEIGKWAAESL---IELDPHHPAGYTLLSSIYASKGK- 589
Query: 371 QKAWELLNQTLYKGM 385
W+ + Q L +GM
Sbjct: 590 ---WDSVAQ-LRRGM 600
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 153/359 (42%), Gaps = 60/359 (16%)
Query: 96 SFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKL 155
+F++ N V YAL + T + RV D +I ++F + L+ YSK
Sbjct: 41 TFLYNNIV--HAYALMKSSTYARRVFD-----RIP--------QPNLFSWNNLLLAYSKA 85
Query: 156 SSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRK-MPVLRLKYDQFTLSAA 214
+ + F+++P+++ V N L+ GY +GL ++ M + TL
Sbjct: 86 GLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLTRVTLMTM 145
Query: 215 LRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVE 274
L+ + V LG+Q+H V++ ES + + S L+ MY G + A++VF G++
Sbjct: 146 LKLSSSNGHVSLGKQIHGQVIKL--GFESYLLVGSPLLYMYANVGCISDAKKVFY--GLD 201
Query: 275 SRNE-------------------------RSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
RN +D V W +M+ +NG KE I+ F+EM
Sbjct: 202 DRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 310 LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY--SCLVDLLCRA 367
+G++ D F +V+ ACG G ++ G + + + N Y S L+D+ C+
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACI---IRTNFQDHIYVGSALIDMYCKC 318
Query: 368 GELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGI 426
L A +T++ M + W A++ G + G+ + LD +GI
Sbjct: 319 KCLHYA-----KTVFDRMKQKNVVSWTAMV-----VGYGQTGRAEEAVKIFLDMQRSGI 367
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 151/469 (32%), Positives = 247/469 (52%), Gaps = 52/469 (11%)
Query: 36 FLHDLH--TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALT 93
FL D++ + L+ Y+ C N Q + F M N + +N +I+ F + G AL
Sbjct: 183 FLSDVYIGSALVDMYSKCGNVNDAQRV---FDEMGDRNVVSWNSLITCFEQNGPAVEALD 239
Query: 94 AFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG-WSSSVFVGSALVDLY 152
F M + V D L S ++A + ++ + G+++H V K + + + +A VD+Y
Sbjct: 240 VFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMY 299
Query: 153 SKLSSVKDAALVFDEIP-------------------------------EKNTVCANALLS 181
+K S +K+A +FD +P E+N V NAL++
Sbjct: 300 AKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIA 359
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
GY + G + L L + + ++ + L+AC L+ + LG Q H +VL+
Sbjct: 360 GYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKF 419
Query: 242 ES----DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNG 297
+S D+F+ +SLI+MY KCG V++ VF R RD V W +M+ + +NG
Sbjct: 420 QSGEEDDIFVGNSLIDMYVKCGCVEEGYLVF-------RKMMERDCVSWNAMIIGFAQNG 472
Query: 298 KYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY 357
E ++LF+EMLE G +PD I + V+SACGH G V G YF SM+ +F + P +HY
Sbjct: 473 YGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHY 532
Query: 358 SCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRAL 417
+C+VDLL RAG L++A ++ + + +WG+LL AC NI LGK ++ L
Sbjct: 533 TCMVDLLGRAGFLEEAKSMIEEMPMQP----DSVIWGSLLAACKVHRNITLGKYVAEKLL 588
Query: 418 ELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
E++P N+G +LLSN+YA G W+++ ++R +++ G+ K GCSW+++
Sbjct: 589 EVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKI 637
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/459 (25%), Positives = 231/459 (50%), Gaps = 75/459 (16%)
Query: 2 SNSIIQFLHQCHVTKNLSAI--KKLHGNLLRTGTLFFLHDL--HTNLIAAYATC------ 51
S+ + L C + LSAI + +H +++++G F +++ LI AY+ C
Sbjct: 19 SSPFAKLLDSC-IKSKLSAIYVRYVHASVIKSG---FSNEIFIQNRLIDAYSKCGSLEDG 74
Query: 52 ------LPKNHLQTLHN----------------FFKCMNSTNPLHFNVIISNFCRKGFPF 89
+P+ ++ T ++ F+ M + +N ++S F +
Sbjct: 75 RQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCE 134
Query: 90 LALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALV 149
AL F+ MH L+ Y+ S L+A S +ND+N G Q+H+ + K + S V++GSALV
Sbjct: 135 EALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALV 194
Query: 150 DLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQF 209
D+YSK +V DA VFDE+ ++N V N+L++ + + G + L++ + M R++ D+
Sbjct: 195 DMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEV 254
Query: 210 TLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFK 269
TL++ + AC LSA+++G+++H V++ + +D+ L ++ ++MY KC +K+A+ +F
Sbjct: 255 TLASVISACASLSAIKVGQEVHGRVVKNDK-LRNDIILSNAFVDMYAKCSRIKEARFIF- 312
Query: 270 LDGVESRN---ERS-----------------------RDVVLWTSMLGVYGRNGKYKEVI 303
D + RN E S R+VV W +++ Y +NG+ +E +
Sbjct: 313 -DSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEAL 371
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK-YFESMSNEFKLNPGPEHY----S 358
LF + E + P +F ++ AC ++H G++ + + + FK G E +
Sbjct: 372 SLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGN 431
Query: 359 CLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
L+D+ + G +++ + + + + + +C W A++
Sbjct: 432 SLIDMYVKCGCVEEGYLVFRKMMER---DCV--SWNAMI 465
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 155/332 (46%), Gaps = 40/332 (12%)
Query: 125 FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYG 184
+ + +HA V K G+S+ +F+ + L+D YSK S++D VFD++P++N N++++G
Sbjct: 38 YVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLT 97
Query: 185 EAGLWAQGLELVRKMPVLR-------------------------------LKYDQFTLSA 213
+ G + L R MP ++++ ++
Sbjct: 98 KLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFAS 157
Query: 214 ALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGV 273
L AC+GL+ + G Q+HS + ++ SDV++ S+L++MY KCG V AQ+VF G
Sbjct: 158 VLSACSGLNDMNKGVQVHSLIAKSP--FLSDVYIGSALVDMYSKCGNVNDAQRVFDEMG- 214
Query: 274 ESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQ 333
R+VV W S++ + +NG E +D+F+ MLE + PD + +VISAC
Sbjct: 215 ------DRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSA 268
Query: 334 VHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMW 393
+ G + + KL + VD+ + +++A + + + + T +
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 394 GALLNACVDCGNIELGKLAGQRALELDPHNAG 425
G + A + K+A + + + AG
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAG 360
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 143/465 (30%), Positives = 249/465 (53%), Gaps = 20/465 (4%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTN-LIAAYATCLPKNHLQTLHN 62
+I+ C ++ +S + +H + F D N L+ Y+ C L +
Sbjct: 298 TIVSVFAGCADSRLISLGRAVHS--IGVKACFSREDRFCNTLLDMYSKC---GDLDSAKA 352
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F+ M+ + + + +I+ + R+G A+ F M + D Y + + L +R
Sbjct: 353 VFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRL 412
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
++ GK++H + + +FV +AL+D+Y+K S+++A LVF E+ K+ + N ++ G
Sbjct: 413 LDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGG 472
Query: 183 YGEAGLWAQGLELVRKM-PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
Y + + L L + R D+ T++ L AC LSA + GR++H Y++R +
Sbjct: 473 YSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGY-- 530
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
SD + +SL++MY KCG + A +F D + S+ D+V WT M+ YG +G KE
Sbjct: 531 FSDRHVANSLVDMYAKCGALLLAHMLF--DDIASK-----DLVSWTVMIAGYGMHGFGKE 583
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
I LF +M + GI D I+F++++ AC H+G V G ++F M +E K+ P EHY+C+V
Sbjct: 584 AIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIV 643
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDP 421
D+L R G+L KA+ + ++WGALL C +++L + ++ EL+P
Sbjct: 644 DMLARTGDLIKAYRFIENMPIPP----DATIWGALLCGCRIHHDVKLAEKVAEKVFELEP 699
Query: 422 HNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
N G +L++N+YA W+++ LR I +RGLRK+ GCSW+++
Sbjct: 700 ENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 174/370 (47%), Gaps = 14/370 (3%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNF 63
++ L C +K+L K++ N +R +L + L Y C L+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVD-NFIRGNGFVIDSNLGSKLSLMYTNC---GDLKEASRV 151
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F + L +N++++ + G ++ F M ++ V +D+Y + S + V
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
+ G+Q+H + K G+ VG++LV Y K V A VFDE+ E++ + N++++GY
Sbjct: 212 HGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
GL +GL + +M V ++ D T+ + C + LGR +HS ++ E
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE- 330
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
D F ++L++MY KCG + A+ VF R R VV +TSM+ Y R G E +
Sbjct: 331 DRFC-NTLLDMYSKCGDLDSAKAVF-------REMSDRSVVSYTSMIAGYAREGLAGEAV 382
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
LF+EM EEGI PD V++ C + G + E + E L + L+D+
Sbjct: 383 KLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI-KENDLGFDIFVSNALMDM 441
Query: 364 LCRAGELQKA 373
+ G +Q+A
Sbjct: 442 YAKCGSMQEA 451
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 165/357 (46%), Gaps = 18/357 (5%)
Query: 105 LDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALV 164
+D LCS L + + GK++ + G+ +GS L +Y+ +K+A+ V
Sbjct: 92 IDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRV 151
Query: 165 FDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAV 224
FDE+ + + N L++ ++G ++ + L +KM ++ D +T S ++ + L +V
Sbjct: 152 FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 211
Query: 225 ELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVV 284
G QLH ++L++ + V +SL+ Y K V A++VF RDV+
Sbjct: 212 HGGEQLHGFILKSGFGERNSV--GNSLVAFYLKNQRVDSARKVFD-------EMTERDVI 262
Query: 285 LWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
W S++ Y NG ++ + +F +ML GI D ++V + C + + G + S+
Sbjct: 263 SWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLG-RAVHSI 321
Query: 345 SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG 404
+ + + L+D+ + G+L A + +++ M + ++ + +++ G
Sbjct: 322 GVKACFSREDRFCNTLLDMYSKCGDLDSA-----KAVFREMSDRSVVSYTSMIAGYAREG 376
Query: 405 NI-ELGKLAGQRALE-LDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDV 459
E KL + E + P + +L N AR+ + DE + IKE L D+
Sbjct: 377 LAGEAVKLFEEMEEEGISPDVYTVTAVL-NCCARYRLLDEGKRVHEWIKENDLGFDI 432
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 250 bits (639), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 139/414 (33%), Positives = 226/414 (54%), Gaps = 22/414 (5%)
Query: 55 NHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTL 114
N L H F M N + + +IS + + AL M +NV + Y S L
Sbjct: 110 NLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVL 169
Query: 115 TASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTV 174
+ + ++DV + +H + K G S VFV SAL+D+++KL +DA VFDE+ + +
Sbjct: 170 RSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAI 226
Query: 175 CANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYV 234
N+++ G+ + LEL ++M +Q TL++ LRACTGL+ +ELG Q H ++
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHI 286
Query: 235 LRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYG 294
++ + D+ L ++L++MY KCG ++ A +VF + RDV+ W++M+
Sbjct: 287 VK----YDQDLILNNALVDMYCKCGSLEDALRVFN-------QMKERDVITWSTMISGLA 335
Query: 295 RNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGP 354
+NG +E + LF+ M G +P+ I + V+ AC H G + G YF SM + ++P
Sbjct: 336 QNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVR 395
Query: 355 EHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTIS--MWGALLNACVDCGNIELGKLA 412
EHY C++DLL +AG+L A +LLN+ C W LL AC N+ L + A
Sbjct: 396 EHYGCMIDLLGKAGKLDDAVKLLNEM------ECEPDAVTWRTLLGACRVQRNMVLAEYA 449
Query: 413 GQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
++ + LDP +AG LLSN+YA WD + +R +++RG++K+ GCSW++V
Sbjct: 450 AKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEV 503
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 152/315 (48%), Gaps = 36/315 (11%)
Query: 77 VIISNFCR----KGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAH 132
+++S F R + P A+ A + ++ + D+ + V+ G I H
Sbjct: 28 LLLSEFTRLCYQRDLP-RAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86
Query: 133 VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQG 192
+ G +F+ + L+++Y K + + DA +FD++P++N + ++S Y + + +
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 193 LELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLI 252
LEL+ M ++ + +T S+ LR+C G+S V R LH +++ +ESDVF++S+LI
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIK--EGLESDVFVRSALI 201
Query: 253 EMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEE 312
+++ K G + A VF + D ++W S++G + +N + ++LFK M
Sbjct: 202 DVFAKLGEPEDALSVFD-------EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRA 254
Query: 313 GIRPDGIAFLTVISAC--------GHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLL 364
G + +V+ AC G VH VKY + LN + LVD+
Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQAHVHI-VKY----DQDLILN------NALVDMY 303
Query: 365 CRAGELQKAWELLNQ 379
C+ G L+ A + NQ
Sbjct: 304 CKCGSLEDALRVFNQ 318
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 250 bits (638), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/464 (31%), Positives = 246/464 (53%), Gaps = 19/464 (4%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTN-LIAAYATCLPKNHLQTLHN 62
++ L C ++LS K ++ +L+ G F L N LI YA C + T +
Sbjct: 309 TVSSVLRACGHLRDLSLAKYIYNYMLKAG--FVLESTVRNILIDVYAKC---GDMITARD 363
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F M + + +N IIS + + G A+ F M D ++ S+R+ D
Sbjct: 364 VFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLAD 423
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ FGK +H++ K G + V +AL+D+Y+K V D+ +F + +TV N ++S
Sbjct: 424 LKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISA 483
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
G +A GL++ +M + D T L C L+A LG+++H +LR + E
Sbjct: 484 CVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY--E 541
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
S++ + ++LIEMY KCG ++ + +VF+ R R RDVV WT M+ YG G+ ++
Sbjct: 542 SELQIGNALIEMYSKCGCLENSSRVFE------RMSR-RDVVTWTGMIYAYGMYGEGEKA 594
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVD 362
++ F +M + GI PD + F+ +I AC H+G V G+ FE M +K++P EHY+C+VD
Sbjct: 595 LETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVD 654
Query: 363 LLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPH 422
LL R+ ++ KA E + K S+W ++L AC G++E + +R +EL+P
Sbjct: 655 LLSRSQKISKAEEFIQAMPIKP----DASIWASVLRACRTSGDMETAERVSRRIIELNPD 710
Query: 423 NAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+ G IL SN YA WD++ +R +K++ + K+ G SW++V
Sbjct: 711 DPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEV 754
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 191/396 (48%), Gaps = 27/396 (6%)
Query: 15 TKNLSAIKKLHGNLLRTG---TLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTN 71
+ NL+ ++++H ++ G + FF LI Y+ + +L F + + N
Sbjct: 17 SSNLNELRRIHALVISLGLDSSDFF----SGKLIDKYSHF--REPASSLSVFRRVSPAKN 70
Query: 72 PLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHA 131
+N II F + G AL + + + V D Y S + A + + D G ++
Sbjct: 71 VYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYE 130
Query: 132 HVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQ 191
+ +G+ S +FVG+ALVD+YS++ + A VFDE+P ++ V N+L+SGY G + +
Sbjct: 131 QILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEE 190
Query: 192 GLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSL 251
LE+ ++ + D FT+S+ L A L V+ G+ LH + L++ S V + + L
Sbjct: 191 ALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGV--NSVVVVNNGL 248
Query: 252 IEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLE 311
+ MY K A++VF V RD V + +M+ Y + +E + +F E L+
Sbjct: 249 VAMYLKFRRPTDARRVFDEMDV-------RDSVSYNTMICGYLKLEMVEESVRMFLENLD 301
Query: 312 EGIRPDGIAFLTVISACGHTGQVH-AGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGEL 370
+ +PD + +V+ ACGH + A Y + F L + L+D+ + G++
Sbjct: 302 Q-FKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRN--ILIDVYAKCGDM 358
Query: 371 QKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNI 406
A ++ N K T+S W ++++ + G++
Sbjct: 359 ITARDVFNSMECKD----TVS-WNSIISGYIQSGDL 389
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 122/229 (53%), Gaps = 13/229 (5%)
Query: 110 LCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEI- 168
+ L++SS +N++ ++IHA V LG SS F L+D YS + VF +
Sbjct: 10 ISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 169 PEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGR 228
P KN N+++ + + GL+ + LE K+ ++ D++T + ++AC GL E+G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 229 QLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTS 288
++ +L ESD+F+ ++L++MY + GL+ +A+QVF V RD+V W S
Sbjct: 127 LVYEQIL--DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV-------RDLVSWNS 177
Query: 289 MLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
++ Y +G Y+E ++++ E+ I PD +V+ A G+ V G
Sbjct: 178 LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 130/274 (47%), Gaps = 10/274 (3%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F M+ + + +N +I + + ++ F + + D + S L A + D+
Sbjct: 265 FDEMDVRDSVSYNTMICGYLKLEMVEESVRMF-LENLDQFKPDLLTVSSVLRACGHLRDL 323
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
+ K I+ ++ K G+ V + L+D+Y+K + A VF+ + K+TV N+++SGY
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGY 383
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
++G + ++L + M ++ + D T + T L+ ++ G+ LHS +++ I
Sbjct: 384 IQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSG--ICI 441
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
D+ + ++LI+MY KCG V + ++F G + D V W +++ R G + +
Sbjct: 442 DLSVSNALIDMYAKCGEVGDSLKIFSSMG-------TGDTVTWNTVISACVRFGDFATGL 494
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
+ +M + + PD FL + C G
Sbjct: 495 QVTTQMRKSEVVPDMATFLVTLPMCASLAAKRLG 528
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 239/457 (52%), Gaps = 18/457 (3%)
Query: 12 CHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTN 71
C +NLS K+LH +R+G + D+ +L+ YA C + F M +
Sbjct: 279 CAELENLSLGKQLHSWAIRSG---LVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHS 335
Query: 72 PLHFNVIISNFCRK-GFPFLALTAFSFMHTN-NVPLDTYALCSTLTASSRVNDVNFGKQI 129
+ + +I+ + + A+ FS M T +V + + S A ++D GKQ+
Sbjct: 336 VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQV 395
Query: 130 HAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLW 189
K G +S+ V ++++ ++ K ++DA F+ + EKN V N L G +
Sbjct: 396 LGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNF 455
Query: 190 AQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQS 249
Q +L+ ++ L FT ++ L + ++ G Q+HS V++ V +
Sbjct: 456 EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVC--N 513
Query: 250 SLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
+LI MY KCG + A +VF +E+RN V+ WTSM+ + ++G V++ F +M
Sbjct: 514 ALISMYSKCGSIDTASRVFNF--MENRN-----VISWTSMITGFAKHGFAIRVLETFNQM 566
Query: 310 LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGE 369
+EEG++P+ + ++ ++SAC H G V G ++F SM + K+ P EHY+C+VDLLCRAG
Sbjct: 567 IEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGL 626
Query: 370 LQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICIL 429
L A+E +N ++ + +W L AC N ELGKLA ++ LELDP+ I
Sbjct: 627 LTDAFEFINTMPFQA----DVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQ 682
Query: 430 LSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
LSN+YA G W+E +R +KER L K+ GCSW++V
Sbjct: 683 LSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEV 719
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 207/462 (44%), Gaps = 66/462 (14%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAF-SFM 98
L+ +LI+ Y+ + + + + + ++ +++ + G A+ F F+
Sbjct: 99 LYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFL 158
Query: 99 HTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG-WSSSVFVGSALVDLYSK-LS 156
VP D Y + + A S + V G+ + K G + S V VG +L+D++ K +
Sbjct: 159 ELGLVPND-YCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGEN 217
Query: 157 SVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALR 216
S ++A VFD++ E N V +++ + G + + M + + D+FTLS+
Sbjct: 218 SFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFS 277
Query: 217 ACTGLSAVELGRQLHSYVLRT--THDIESDVFLQSSLIEMYGKC---GLVKKAQQVFKLD 271
AC L + LG+QLHS+ +R+ D+E SL++MY KC G V ++VF D
Sbjct: 278 ACAELENLSLGKQLHSWAIRSGLVDDVE------CSLVDMYAKCSADGSVDDCRKVF--D 329
Query: 272 GVESRNERSRDVVLWTSMLGVYGRNGKY-KEVIDLFKEMLEEG-IRPDGIAFLTVISACG 329
+E + V+ WT+++ Y +N E I+LF EM+ +G + P+ F + ACG
Sbjct: 330 RMEDHS-----VMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACG 384
Query: 330 HTGQVHAG-----------------------------------VKYFESMSNEFKLNPGP 354
+ G + FES+S + ++
Sbjct: 385 NLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVS--- 441
Query: 355 EHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQ 414
Y+ +D CR ++A++LL++ + +G + + +LL+ + G+I G+
Sbjct: 442 --YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFT-FASLLSGVANVGSIRKGEQIHS 498
Query: 415 RALELDPH-NAGICILLSNLYARFGMWDEIGHLRVVIKERGL 455
+ ++L N +C L ++Y++ G D + ++ R +
Sbjct: 499 QVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNV 540
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 118/252 (46%), Gaps = 13/252 (5%)
Query: 91 ALTAFSFMHTNNV-PLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALV 149
A++A M + + P+D+ S L + R D GK +HA + + + ++L+
Sbjct: 45 AVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLI 104
Query: 150 DLYSKLSSVKDAALVFDEIP---EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKY 206
LYSK A VF+ + +++ V +A+++ YG G +++ + L L
Sbjct: 105 SLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVP 164
Query: 207 DQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC-GLVKKAQ 265
+ + +A +RAC+ V +GR ++++T H ESDV + SLI+M+ K + A
Sbjct: 165 NDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGH-FESDVCVGCSLIDMFVKGENSFENAY 223
Query: 266 QVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVI 325
+VF D + N VV WT M+ + G +E I F +M+ G D +V
Sbjct: 224 KVF--DKMSELN-----VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVF 276
Query: 326 SACGHTGQVHAG 337
SAC + G
Sbjct: 277 SACAELENLSLG 288
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 249 bits (636), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 257/484 (53%), Gaps = 53/484 (10%)
Query: 17 NLSAIKKLHGNLLRT--GTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLH 74
+LS + LHG +++ G+ F+ + +LI Y +C L + F + + +
Sbjct: 146 SLSLGQSLHGMAVKSAVGSDVFVAN---SLIHCYFSC---GDLDSACKVFTTIKEKDVVS 199
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N +I+ F +KG P AL F M + +V + L+A +++ ++ FG+Q+ +++
Sbjct: 200 WNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIE 259
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
+ + ++ + +A++D+Y+K S++DA +FD + EK+ V +L GY + + E
Sbjct: 260 ENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAARE 319
Query: 195 LVRKMPVL--------------------------------RLKYDQFTLSAALRACTGLS 222
++ MP +K +Q TL + L AC +
Sbjct: 320 VLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVG 379
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRD 282
A+ELGR +HSY+ + H I + + S+LI MY KCG ++K+++VF + VE R D
Sbjct: 380 ALELGRWIHSYIKK--HGIRMNFHVTSALIHMYSKCGDLEKSREVF--NSVEKR-----D 430
Query: 283 VVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFE 342
V +W++M+G +G E +D+F +M E ++P+G+ F V AC HTG V F
Sbjct: 431 VFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFH 490
Query: 343 SMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVD 402
M + + + P +HY+C+VD+L R+G L+KA + + + S+WGALL AC
Sbjct: 491 QMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPP----STSVWGALLGACKI 546
Query: 403 CGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCS 462
N+ L ++A R LEL+P N G +LLSN+YA+ G W+ + LR ++ GL+K+ GCS
Sbjct: 547 HANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCS 606
Query: 463 WVQV 466
+++
Sbjct: 607 SIEI 610
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 196/417 (47%), Gaps = 38/417 (9%)
Query: 17 NLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFN 76
+L +K+ HG+++RTGT F + + A A L+ F + N +N
Sbjct: 42 SLRQLKQTHGHMIRTGT--FSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWN 99
Query: 77 VIISNFCRKGFPFLALTAF-SFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
+I + P L++ AF + + + Y + A++ V+ ++ G+ +H K
Sbjct: 100 TLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVK 159
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLEL 195
S VFV ++L+ Y + A VF I EK+ V N++++G+ + G + LEL
Sbjct: 160 SAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALEL 219
Query: 196 VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
+KM +K T+ L AC + +E GRQ+ SY+ + + ++ L +++++MY
Sbjct: 220 FKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYI--EENRVNVNLTLANAMLDMY 277
Query: 256 GKCGLVKKAQQVFK-------------LDG--VESRNERSR---------DVVLWTSMLG 291
KCG ++ A+++F LDG + E +R D+V W +++
Sbjct: 278 TKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALIS 337
Query: 292 VYGRNGKYKEVIDLFKEM-LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKL 350
Y +NGK E + +F E+ L++ ++ + I ++ +SAC G + G ++ S + +
Sbjct: 338 AYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGI 396
Query: 351 NPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLN--ACVDCGN 405
S L+ + + G+L+K+ E+ N + + +W A++ A CGN
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRD-----VFVWSAMIGGLAMHGCGN 448
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 219/398 (55%), Gaps = 13/398 (3%)
Query: 72 PLHF--NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQI 129
P+ F N I+ ++ R P A+ + M + V D Y+L + A+ +++D GK++
Sbjct: 80 PIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKEL 139
Query: 130 HAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLW 189
H+ +LG+ F S + LY K ++A VFDE PE+ NA++ G AG
Sbjct: 140 HSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRA 199
Query: 190 AQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQS 249
+ +E+ M L+ D FT+ + +C GL + L QLH VL+ + +SD+ + +
Sbjct: 200 NEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLN 259
Query: 250 SLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
SLI+MYGKCG + A +F+ R R+VV W+SM+ Y NG E ++ F++M
Sbjct: 260 SLIDMYGKCGRMDLASHIFE-------EMRQRNVVSWSSMIVGYAANGNTLEALECFRQM 312
Query: 310 LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGE 369
E G+RP+ I F+ V+SAC H G V G YF M +EF+L PG HY C+VDLL R G+
Sbjct: 313 REFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQ 372
Query: 370 LQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICIL 429
L++A +++ + K + +WG L+ C G++E+ + +EL+P N G+ ++
Sbjct: 373 LKEAKKVVEEMPMKP----NVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVV 428
Query: 430 LSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQVT 467
L+N+YA GMW ++ +R ++K + + K S+ T
Sbjct: 429 LANVYALRGMWKDVERVRKLMKTKKVAKIPAYSYASTT 466
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/465 (31%), Positives = 254/465 (54%), Gaps = 21/465 (4%)
Query: 3 NSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHN 62
+S + C K L ++LH ++++ G LF ++ T L+ AY+ C L L
Sbjct: 296 SSFASVIKLCANLKELRFTEQLHCSVVKYGFLFD-QNIRTALMVAYSKCTA--MLDALRL 352
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F + N + + +IS F + A+ FS M V + + LTA ++
Sbjct: 353 FKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISP 412
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
++HA V K + S VG+AL+D Y KL V++AA VF I +K+ V +A+L+G
Sbjct: 413 ----SEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAG 468
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSA-VELGRQLHSYVLRTTHDI 241
Y + G +++ ++ +K ++FT S+ L C +A + G+Q H + +++ D
Sbjct: 469 YAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLD- 527
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
S + + S+L+ MY K G ++ A++VFK +R +D+V W SM+ Y ++G+ +
Sbjct: 528 -SSLCVSSALLTMYAKKGNIESAEEVFK-------RQREKDLVSWNSMISGYAQHGQAMK 579
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
+D+FKEM + ++ DG+ F+ V +AC H G V G KYF+ M + K+ P EH SC+V
Sbjct: 580 ALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMV 639
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDP 421
DL RAG+L+KA +++ + + G+ ++W +L AC ELG+LA ++ + + P
Sbjct: 640 DLYSRAGQLEKAMKVI-ENMPNPAGS---TIWRTILAACRVHKKTELGRLAAEKIIAMKP 695
Query: 422 HNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
++ +LLSN+YA G W E +R ++ ER ++K+ G SW++V
Sbjct: 696 EDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEV 740
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 136/290 (46%), Gaps = 15/290 (5%)
Query: 55 NHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTL 114
+ L HN F + + ++ F R G A F +H + +D S L
Sbjct: 41 SRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVL 100
Query: 115 TASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTV 174
S+ + D FG+Q+H K G+ V VG++LVD Y K S+ KD VFDE+ E+N V
Sbjct: 101 KVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVV 160
Query: 175 CANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYV 234
L+SGY + + L L +M + + FT +AAL G Q+H+ V
Sbjct: 161 TWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVV 220
Query: 235 LRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYG 294
++ + ++ + + +SLI +Y KCG V+KA+ +F V+S VV W SM+ Y
Sbjct: 221 VK--NGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS-------VVTWNSMISGYA 271
Query: 295 RNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGH------TGQVHAGV 338
NG E + +F M +R +F +VI C + T Q+H V
Sbjct: 272 ANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSV 321
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 180/390 (46%), Gaps = 30/390 (7%)
Query: 22 KKLHGNLLRTGTLFFLHDLH--TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVII 79
++LH ++ G FL D+ T+L+ Y + ++ + F M N + + +I
Sbjct: 113 RQLHCQCIKFG---FLDDVSVGTSLVDTY---MKGSNFKDGRKVFDEMKERNVVTWTTLI 166
Query: 80 SNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWS 139
S + R LT F M +++ + L + G Q+H V K G
Sbjct: 167 SGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
++ V ++L++LY K +V+ A ++FD+ K+ V N+++SGY GL + L + M
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Query: 200 PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG 259
+ ++ + + ++ ++ C L + QLH V++ + D ++++L+ Y KC
Sbjct: 287 RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVK--YGFLFDQNIRTALMVAYSKCT 344
Query: 260 LVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGI 319
+ A ++FK G +VV WT+M+ + +N +E +DLF EM +G+RP+
Sbjct: 345 AMLDALRLFKEIGCVG------NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEF 398
Query: 320 AFLTVISACG--HTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELL 377
+ +++A +VHA V + E G + L+D + G++++A
Sbjct: 399 TYSVILTALPVISPSEVHAQVV---KTNYERSSTVG----TALLDAYVKLGKVEEA---- 447
Query: 378 NQTLYKGMGNCTISMWGALLNACVDCGNIE 407
++ G+ + I W A+L G E
Sbjct: 448 -AKVFSGIDDKDIVAWSAMLAGYAQTGETE 476
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 246 bits (629), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 141/464 (30%), Positives = 255/464 (54%), Gaps = 18/464 (3%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTN-LIAAYATCLPKNHLQTLHN 62
+I+ + C L ++K+LH L+ F ++L N +A+YA C ++ Q +
Sbjct: 397 TILNAVPVCFHESFLPSLKELHCYSLKQE--FVYNELVANAFVASYAKCGSLSYAQRV-- 452
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F + S +N +I + P L+L A M + + D++ +CS L+A S++
Sbjct: 453 -FHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKS 511
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ GK++H + + +FV +++ LY + +FD + +K+ V N +++G
Sbjct: 512 LRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITG 571
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
Y + G + L + R+M + ++ ++ AC+ L ++ LGR+ H+Y L+ H +E
Sbjct: 572 YLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK--HLLE 629
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
D F+ SLI+MY K G + ++ +VF +G++ ++ S W +M+ YG +G KE
Sbjct: 630 DDAFIACSLIDMYAKNGSITQSSKVF--NGLKEKSTAS-----WNAMIMGYGIHGLAKEA 682
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVD 362
I LF+EM G PD + FL V++AC H+G +H G++Y + M + F L P +HY+C++D
Sbjct: 683 IKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVID 742
Query: 363 LLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPH 422
+L RAG+L KA ++ + + + + +W +LL++C N+E+G+ + EL+P
Sbjct: 743 MLGRAGQLDKALRVVAEEMSE---EADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPE 799
Query: 423 NAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+LLSNLYA G W+++ +R + E LRKD GCSW+++
Sbjct: 800 KPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIEL 843
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 193/438 (44%), Gaps = 53/438 (12%)
Query: 16 KNLSAIKKLHGNLLRTGTLFFLHD--LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPL 73
K++ +K+H L +G+ +D L T +I YA C + + + F + S N
Sbjct: 98 KDIEMGRKIHQ--LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFV---FDALRSKNLF 152
Query: 74 HFNVIISNFCRKGFPFLALTAF-SFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAH 132
+N +IS++ R L F + T ++ D + + A + ++DV G +H
Sbjct: 153 QWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGL 212
Query: 133 VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQG 192
V K G VFVG+ALV Y V DA +FD +PE+N V N+++ + + G +
Sbjct: 213 VVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEES 272
Query: 193 LELVRKMPVLR----LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
L+ +M D TL L C + LG+ +H + ++ D E + L
Sbjct: 273 FLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKE--LVLN 330
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
++L++MY KCG + AQ +FK++ +++VV W +M+G + G D+ ++
Sbjct: 331 NALMDMYSKCGCITNAQMIFKMNN-------NKNVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 309 MLE--EGIRPDGIAFLTVISACGHTG------QVHAGVKYFESMSNEFKLNPGPEHYSCL 360
ML E ++ D + L + C H ++H E + NE N Y+
Sbjct: 384 MLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYA-- 441
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELG-------KLAG 413
+ G L A Q ++ G+ + T++ W AL+ + L K++G
Sbjct: 442 -----KCGSLSYA-----QRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISG 491
Query: 414 QRALELDPHNAGICILLS 431
L P + +C LLS
Sbjct: 492 -----LLPDSFTVCSLLS 504
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 152/336 (45%), Gaps = 27/336 (8%)
Query: 74 HFNVIISNFCRKGFPFLAL-TAFSFMHTNNVPLDTY-----ALCSTLTASSRVNDVNFGK 127
HF ISNFC G + T F+ + D + AL L AS + D+ G+
Sbjct: 45 HFLRRISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGR 104
Query: 128 QIHAHV-GKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
+IH V G + + + ++ +Y+ S D+ VFD + KN NA++S Y
Sbjct: 105 KIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRN 164
Query: 187 GLWAQGLE-LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
L+ + LE + + L D FT ++AC G+S V +G +H V++T + DV
Sbjct: 165 ELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTG--LVEDV 222
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
F+ ++L+ YG G V A Q+F + R++V W SM+ V+ NG +E L
Sbjct: 223 FVGNALVSFYGTHGFVTDALQLFDI-------MPERNLVSWNSMIRVFSDNGFSEESFLL 275
Query: 306 FKEMLEE----GIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
EM+EE PD +TV+ C ++ G K + + +L+ + L+
Sbjct: 276 LGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLG-KGVHGWAVKLRLDKELVLNNALM 334
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
D+ + G + A Q ++K N + W ++
Sbjct: 335 DMYSKCGCITNA-----QMIFKMNNNKNVVSWNTMV 365
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 245 bits (625), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 230/425 (54%), Gaps = 45/425 (10%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N +IS + +GF AL M ++ + LD + S + A + + GKQ+HA+V
Sbjct: 254 YNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVL 313
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY------GEA-- 186
+ S ++LV LY K +A +F+++P K+ V NALLSGY GEA
Sbjct: 314 RRE-DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKL 372
Query: 187 -----------------------GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSA 223
G +GL+L M + + S A+++C L A
Sbjct: 373 IFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGA 432
Query: 224 VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
G+Q H+ +L+ D S + ++LI MY KCG+V++A+QVF R D
Sbjct: 433 YCNGQQYHAQLLKIGFD--SSLSAGNALITMYAKCGVVEEARQVF-------RTMPCLDS 483
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFES 343
V W +++ G++G E +D+++EML++GIRPD I LTV++AC H G V G KYF+S
Sbjct: 484 VSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDS 543
Query: 344 MSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDC 403
M +++ PG +HY+ L+DLLCR+G+ A ++ +K T +W ALL+ C
Sbjct: 544 METVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKP----TAEIWEALLSGCRVH 599
Query: 404 GNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSW 463
GN+ELG +A + L P + G +LLSN++A G W+E+ +R ++++RG++K+V CSW
Sbjct: 600 GNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSW 659
Query: 464 VQVTS 468
+++ +
Sbjct: 660 IEMET 664
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 163/382 (42%), Gaps = 55/382 (14%)
Query: 66 CMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV-NDVN 124
CM T + +N +I+ F + A+ F M D + S L + V +D
Sbjct: 109 CMRDT--VMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEK 166
Query: 125 FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSS----VKDAALVFDEIPEKNT------- 173
Q HA K G V +ALV +YSK +S + A VFDEI EK+
Sbjct: 167 QCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMM 226
Query: 174 -------------------------VCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQ 208
V NA++SGY G + + LE+VR+M ++ D+
Sbjct: 227 TGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDE 286
Query: 209 FTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF 268
FT + +RAC ++LG+Q+H+YVLR + +SL+ +Y KCG +A+ +F
Sbjct: 287 FTYPSVIRACATAGLLQLGKQVHAYVLRRE---DFSFHFDNSLVSLYYKCGKFDEARAIF 343
Query: 269 KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC 328
+ ++D+V W ++L Y +G E +FKEM E+ I ++++ +IS
Sbjct: 344 E-------KMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI----LSWMIMISGL 392
Query: 329 GHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNC 388
G G+K F M E P +S + G + Q L G +
Sbjct: 393 AENGFGEEGLKLFSCMKRE-GFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGF-DS 450
Query: 389 TISMWGALLNACVDCGNIELGK 410
++S AL+ CG +E +
Sbjct: 451 SLSAGNALITMYAKCGVVEEAR 472
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 102/214 (47%), Gaps = 1/214 (0%)
Query: 56 HLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLT 115
H+ FK M N L + ++IS GF L FS M YA +
Sbjct: 366 HIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIK 425
Query: 116 ASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVC 175
+ + + G+Q HA + K+G+ SS+ G+AL+ +Y+K V++A VF +P ++V
Sbjct: 426 SCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS 485
Query: 176 ANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVL 235
NAL++ G+ G A+ +++ +M ++ D+ TL L AC+ V+ GR+ +
Sbjct: 486 WNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFD-SM 544
Query: 236 RTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFK 269
T + I + LI++ + G A+ V +
Sbjct: 545 ETVYRIPPGADHYARLIDLLCRSGKFSDAESVIE 578
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 148/385 (38%), Gaps = 104/385 (27%)
Query: 106 DTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVF 165
+ YA L R + + +H ++ G+ + + L+D+Y K S + A +F
Sbjct: 13 NRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLF 72
Query: 166 DEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV-LR--------------------- 203
DEI E + + ++SGY +G + K PV +R
Sbjct: 73 DEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSA 132
Query: 204 -----------LKYDQFTLSAALRACTGLSAVELGR----QLHSYVLRTTHDIESDVFLQ 248
K D FT ++ L GL+ V Q H+ L++ + V
Sbjct: 133 INLFCKMKHEGFKPDNFTFASVL---AGLALVADDEKQCVQFHAAALKSGAGYITSV--S 187
Query: 249 SSLIEMYGKCG----LVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGK------ 298
++L+ +Y KC L+ A++VF D + ++ERS WT+M+ Y +NG
Sbjct: 188 NALVSVYSKCASSPSLLHSARKVF--DEILEKDERS-----WTTMMTGYVKNGYFDLGEE 240
Query: 299 --------------------------YKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTG 332
Y+E +++ + M+ GI D + +VI AC G
Sbjct: 241 LLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAG 300
Query: 333 ------QVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMG 386
QVHA V E S F + LV L + G+ +A + +++ M
Sbjct: 301 LLQLGKQVHAYVLRREDFSFHFD--------NSLVSLYYKCGKFDEA-----RAIFEKMP 347
Query: 387 NCTISMWGALLNACVDCGNIELGKL 411
+ W ALL+ V G+I KL
Sbjct: 348 AKDLVSWNALLSGYVSSGHIGEAKL 372
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 144/467 (30%), Positives = 261/467 (55%), Gaps = 23/467 (4%)
Query: 3 NSIIQFLHQCHVTKNLSAIKKLHGNLLRT---GTLFFLHDLHTNLIAAYATCLPKNHLQT 59
N + + L C + K HG ++R G + L+ LI AY+ C ++
Sbjct: 62 NLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLN----VLINAYSKC---GFVEL 114
Query: 60 LHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSR 119
F M + + +N +I + R AL F M + + S L+A
Sbjct: 115 ARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGV 174
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANAL 179
D K++H K +++VG+AL+DLY+K +KDA VF+ + +K++V +++
Sbjct: 175 NCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSM 234
Query: 180 LSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTH 239
++GY + + + L L R+ + L+ +QFTLS+ + AC+ L+A+ G+Q+H+ + ++
Sbjct: 235 VAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKS-- 292
Query: 240 DIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKY 299
S+VF+ SS ++MY KCG ++++ +F V+ +N + LW +++ + ++ +
Sbjct: 293 GFGSNVFVASSAVDMYAKCGSLRESYIIF--SEVQEKN-----LELWNTIISGFAKHARP 345
Query: 300 KEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSC 359
KEV+ LF++M ++G+ P+ + F +++S CGHTG V G ++F+ M + L+P HYSC
Sbjct: 346 KEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSC 405
Query: 360 LVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALEL 419
+VD+L RAG L +A+EL+ + + T S+WG+LL +C N+EL ++A ++ EL
Sbjct: 406 MVDILGRAGLLSEAYELIKSIPF----DPTASIWGSLLASCRVYKNLELAEVAAEKLFEL 461
Query: 420 DPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+P NAG +LLSN+YA W+EI R ++++ ++K G SW+ +
Sbjct: 462 EPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDI 508
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 243 bits (620), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 144/427 (33%), Positives = 230/427 (53%), Gaps = 20/427 (4%)
Query: 43 NLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFL---ALTAFSFMH 99
+LI YA C + L F + + + FN +I + R G + AL F M
Sbjct: 390 SLIDMYAKC---DCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMR 446
Query: 100 TNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVK 159
+ S L AS+ + + KQIH + K G + +F GSAL+D+YS +K
Sbjct: 447 FRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLK 506
Query: 160 DAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACT 219
D+ LVFDE+ K+ V N++ +GY + + L L ++ + R + D+FT + + A
Sbjct: 507 DSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAG 566
Query: 220 GLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNER 279
L++V+LG++ H +L+ +E + ++ ++L++MY KCG + A + F +
Sbjct: 567 NLASVQLGQEFHCQLLK--RGLECNPYITNALLDMYAKCGSPEDAHKAFD-------SAA 617
Query: 280 SRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK 339
SRDVV W S++ Y +G+ K+ + + ++M+ EGI P+ I F+ V+SAC H G V G+K
Sbjct: 618 SRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLK 677
Query: 340 YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
FE M F + P EHY C+V LL RAG L KA EL+ + K +W +LL+
Sbjct: 678 QFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAA----IVWRSLLSG 732
Query: 400 CVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDV 459
C GN+EL + A + A+ DP ++G +LSN+YA GMW E +R +K G+ K+
Sbjct: 733 CAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEP 792
Query: 460 GCSWVQV 466
G SW+ +
Sbjct: 793 GRSWIGI 799
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 146/281 (51%), Gaps = 18/281 (6%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F + + + + +IS + G +++L F + +NV D Y L + L+A S + +
Sbjct: 206 FDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFL 265
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
GKQIHAH+ + G + + L+D Y K V A +F+ +P KN + LLSGY
Sbjct: 266 EGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGY 325
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+ L + +EL M LK D + S+ L +C L A+ G Q+H+Y ++ ++ +
Sbjct: 326 KQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKA--NLGN 383
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNG---KYK 300
D ++ +SLI+MY KC + A++VF + + DVVL+ +M+ Y R G +
Sbjct: 384 DSYVTNSLIDMYAKCDCLTDARKVFDIFA-------AADVVLFNAMIEGYSRLGTQWELH 436
Query: 301 EVIDLFKEMLEEGIRPDGIAFLTVISAC------GHTGQVH 335
E +++F++M IRP + F++++ A G + Q+H
Sbjct: 437 EALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIH 477
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/284 (30%), Positives = 151/284 (53%), Gaps = 22/284 (7%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAF-SFMHTNNVPLDTYALCSTLTASSRVND 122
F+ M N + ++ ++S G +L F F T + Y L S + A S ++
Sbjct: 102 FEKMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD- 160
Query: 123 VNFGK----QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANA 178
G+ Q+ + + K G+ V+VG+ L+D Y K ++ A LVFD +PEK+TV
Sbjct: 161 -GRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTT 219
Query: 179 LLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTT 238
++SG + G L+L ++ + D + LS L AC+ L +E G+Q+H+++LR
Sbjct: 220 MISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-- 277
Query: 239 HDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGK 298
+ +E D L + LI+ Y KCG V A ++F +G+ ++N ++ WT++L Y +N
Sbjct: 278 YGLEMDASLMNVLIDSYVKCGRVIAAHKLF--NGMPNKN-----IISWTTLLSGYKQNAL 330
Query: 299 YKEVIDLFKEMLEEGIRPDGIAFLTVISAC------GHTGQVHA 336
+KE ++LF M + G++PD A +++++C G QVHA
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHA 374
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 139/283 (49%), Gaps = 26/283 (9%)
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+++ +H + G ++ + L++LYS+ + A VF+++PE+N V + ++S
Sbjct: 60 LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSA 119
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYD---QFTLSAALRACTGLSAVELGR----QLHSYVL 235
G++ + LV + R + D ++ LS+ ++AC+GL GR QL S+++
Sbjct: 120 CNHHGIYEES--LVVFLEFWRTRKDSPNEYILSSFIQACSGLDG--RGRWMVFQLQSFLV 175
Query: 236 RTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGR 295
++ D DV++ + LI+ Y K G + A+ VF ++ E+S V WT+M+ +
Sbjct: 176 KSGFD--RDVYVGTLLIDFYLKDGNIDYARLVF-----DALPEKS--TVTWTTMISGCVK 226
Query: 296 NGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPE 355
G+ + LF +++E+ + PDG TV+SAC + G K + + L
Sbjct: 227 MGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG-KQIHAHILRYGLEMDAS 285
Query: 356 HYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLN 398
+ L+D + G + A +L N GM N I W LL+
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFN-----GMPNKNIISWTTLLS 323
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 144/463 (31%), Positives = 241/463 (52%), Gaps = 17/463 (3%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNF 63
+I+ L + +S K++HG +R+G L ++ T L+ YA C L+T
Sbjct: 238 TIVSVLPAVSALRLISVGKEIHGYAMRSG-FDSLVNISTALVDMYAKC---GSLETARQL 293
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F M N + +N +I + + P A+ F M V ++ L A + + D+
Sbjct: 294 FDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDL 353
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
G+ IH +LG +V V ++L+ +Y K V AA +F ++ + V NA++ G+
Sbjct: 354 ERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGF 413
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+ G L +M +K D FT + + A LS + +H V+R+ D
Sbjct: 414 AQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLD--K 471
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
+VF+ ++L++MY KCG + A+ +F + R V W +M+ YG +G K +
Sbjct: 472 NVFVTTALVDMYAKCGAIMIARLIFDM-------MSERHVTTWNAMIDGYGTHGFGKAAL 524
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
+LF+EM + I+P+G+ FL+VISAC H+G V AG+K F M + + +HY +VDL
Sbjct: 525 ELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDL 584
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHN 423
L RAG L +AW+ + Q K ++++GA+L AC N+ + A +R EL+P +
Sbjct: 585 LGRAGRLNEAWDFIMQMPVKP----AVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDD 640
Query: 424 AGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
G +LL+N+Y MW+++G +RV + +GLRK GCS V++
Sbjct: 641 GGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEI 683
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/390 (26%), Positives = 194/390 (49%), Gaps = 22/390 (5%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCM 67
L +C K L I L + + G L+ H T L++ + + F+ +
Sbjct: 43 LLERCSSLKELRQILPL---VFKNG-LYQEHFFQTKLVSLFCR---YGSVDEAARVFEPI 95
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGK 127
+S + ++ ++ F + AL F M ++V Y L ++ GK
Sbjct: 96 DSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGK 155
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
+IH + K G+S +F + L ++Y+K V +A VFD +PE++ V N +++GY + G
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNG 215
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
+ LE+V+ M LK T+ + L A + L + +G+++H Y +R+ D S V +
Sbjct: 216 MARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFD--SLVNI 273
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
++L++MY KCG ++ A+Q+F DG+ RN VV W SM+ Y +N KE + +F+
Sbjct: 274 STALVDMYAKCGSLETARQLF--DGMLERN-----VVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 308 EMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRA 367
+ML+EG++P ++ + + AC G + G ++ +S E L+ + L+ + C+
Sbjct: 327 KMLDEGVKPTDVSVMGALHACADLGDLERG-RFIHKLSVELGLDRNVSVVNSLISMYCKC 385
Query: 368 GELQKAWELLNQTLYKGMGNCTISMWGALL 397
E+ A +++ + + T+ W A++
Sbjct: 386 KEVDTA-----ASMFGKLQSRTLVSWNAMI 410
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 241 bits (616), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 139/445 (31%), Positives = 240/445 (53%), Gaps = 17/445 (3%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
+++H ++ G L F+ L L+ Y+ C L F N + ++ +++
Sbjct: 241 RQIHCITIKNGLLGFVA-LSNALVTMYSKC---ESLNEACKMFDSSGDRNSITWSAMVTG 296
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
+ + G A+ FS M + + Y + L A S + + GKQ+H+ + KLG+
Sbjct: 297 YSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERH 356
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV 201
+F +ALVD+Y+K + DA FD + E++ +L+SGY + + L L R+M
Sbjct: 357 LFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKT 416
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
+ + T+++ L+AC+ L+ +ELG+Q+H + ++ H +V + S+L MY KCG +
Sbjct: 417 AGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK--HGFGLEVPIGSALSTMYSKCGSL 474
Query: 262 KKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAF 321
+ VF R ++DVV W +M+ NG+ E ++LF+EML EG+ PD + F
Sbjct: 475 EDGNLVF-------RRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTF 527
Query: 322 LTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTL 381
+ +ISAC H G V G YF MS++ L+P +HY+C+VDLL RAG+L++A E + ++
Sbjct: 528 VNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFI-ESA 586
Query: 382 YKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWD 441
G C +W LL+AC + G ELG AG++ + L + + LS +Y G
Sbjct: 587 NIDHGLC---LWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMR 643
Query: 442 EIGHLRVVIKERGLRKDVGCSWVQV 466
++ + ++ G+ K+VGCSW+++
Sbjct: 644 DVERVWKHMRANGVSKEVGCSWIEL 668
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 123/494 (24%), Positives = 217/494 (43%), Gaps = 75/494 (15%)
Query: 16 KNLSAIKKLHGNLLRTGTLFFLHDLHTN-LIAAYATCLPKNHLQTLHNFFKCMNSTNPLH 74
+NL A + +HG ++RTG + H N L+ YA C L H+ F + + +
Sbjct: 28 RNLVAGRAVHGQIIRTGASTCIQ--HANVLVNFYAKC---GKLAKAHSIFNAIICKDVVS 82
Query: 75 FNVIISNFCRKG---FPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHA 131
+N +I+ + + G + + F M ++ + Y L A S + G+Q HA
Sbjct: 83 WNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHA 142
Query: 132 HVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQ 191
V K+ ++V ++LV +Y K V+D VF +PE+NT + ++SGY G +
Sbjct: 143 LVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 192 GLELVRKMPVLRLKYD----QFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
+++ LR K + + +A L + V LGRQ+H ++ + + V L
Sbjct: 203 AIKVFNLF--LREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIK--NGLLGFVAL 258
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
++L+ MY KC + +A ++F G R+ + W++M+ Y +NG+ E + LF
Sbjct: 259 SNALVTMYSKCESLNEACKMFDSSG-------DRNSITWSAMVTGYSQNGESLEAVKLFS 311
Query: 308 EMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY----SCLVDL 363
M GI+P + V++AC + G + + F L G E + + LVD+
Sbjct: 312 RMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL-----HSFLLKLGFERHLFATTALVDM 366
Query: 364 LCRAG---ELQKAWELLNQ-----------------------TLYKGMGNCTI----SMW 393
+AG + +K ++ L + LY+ M I
Sbjct: 367 YAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTM 426
Query: 394 GALLNACVDCGNIELGKLAGQRALELDPHNAGICI----LLSNLYARFGMWDEIGHLRVV 449
++L AC +ELGK ++ H G+ + LS +Y++ G ++ G+L
Sbjct: 427 ASVLKACSSLATLELGKQVHGHTIK---HGFGLEVPIGSALSTMYSKCGSLED-GNL--- 479
Query: 450 IKERGLRKDVGCSW 463
+ R KDV SW
Sbjct: 480 VFRRTPNKDV-VSW 492
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 178/378 (47%), Gaps = 42/378 (11%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFS-FMHTNNVPLDT-YALCSTLTASSRVN 121
F M N ++ ++S + +G A+ F+ F+ D+ Y + L++ +
Sbjct: 176 FAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATI 235
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
V G+QIH K G V + +ALV +YSK S+ +A +FD ++N++ +A+++
Sbjct: 236 YVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVT 295
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
GY + G + ++L +M +K ++T+ L AC+ + +E G+QLHS++L+
Sbjct: 296 GYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKL--GF 353
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
E +F ++L++MY K G + A++ F + RDV LWTS++ Y +N +E
Sbjct: 354 ERHLFATTALVDMYAKAGCLADARKGFDC-------LQERDVALWTSLISGYVQNSDNEE 406
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISAC-------------GHT---------------GQ 333
+ L++ M GI P+ +V+ AC GHT
Sbjct: 407 ALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALST 466
Query: 334 VHAGVKYFESMSNEFKLNPGPE--HYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTIS 391
+++ E + F+ P + ++ ++ L G+ +A EL + L +GM ++
Sbjct: 467 MYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVT 526
Query: 392 MWGALLNACVDCGNIELG 409
+++AC G +E G
Sbjct: 527 FVN-IISACSHKGFVERG 543
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 159/339 (46%), Gaps = 45/339 (13%)
Query: 107 TYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFD 166
T L LT S+ ++ G+ +H + + G S+ + + LV+ Y+K + A +F+
Sbjct: 14 TSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFN 73
Query: 167 EIPEKNTVCANALLSGYGEAGLWAQG---LELVRKMPVLRLKYDQFTLSAALRACTGLSA 223
I K+ V N+L++GY + G + ++L R+M + + +TL+ +A + L +
Sbjct: 74 AIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQS 133
Query: 224 VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
+GRQ H+ V++ + D+++ +SL+ MY K GLV+ +VF R+
Sbjct: 134 STVGRQAHALVVKMSS--FGDIYVDTSLVGMYCKAGLVEDGLKVFAY-------MPERNT 184
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEML---EEGIRPDGI--AFLTVISACGHTG---QVH 335
W++M+ Y G+ +E I +F L EEG D + A L+ ++A + G Q+H
Sbjct: 185 YTWSTMVSGYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIH 244
Query: 336 A-----GVKYFESMSNEF--------KLNPGPEHY-----------SCLVDLLCRAGELQ 371
G+ F ++SN LN + + S +V + GE
Sbjct: 245 CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESL 304
Query: 372 KAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGK 410
+A +L ++ G+ ++ G +LNAC D +E GK
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVG-VLNACSDICYLEEGK 342
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 241 bits (614), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 148/461 (32%), Positives = 245/461 (53%), Gaps = 22/461 (4%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHD--LHTNLIAAYATCLPKNHLQTLHNFFK 65
L +C V K L + +H ++L++ F HD + L+ YA C L+ F+
Sbjct: 66 LLKKCTVFKLLIQGRIVHAHILQS---IFRHDIVMGNTLLNMYAKC---GSLEEARKVFE 119
Query: 66 CMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNF 125
M + + + +IS + + P AL F+ M + + L S + A++
Sbjct: 120 KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCC 179
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
G Q+H K G+ S+V VGSAL+DLY++ + DA LVFD + +N V NAL++G+
Sbjct: 180 GHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHAR 239
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
+ LEL + M + F+ ++ AC+ +E G+ +H+Y++++ + +
Sbjct: 240 RSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA-- 297
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
F ++L++MY K G + A+++F RDVV W S+L Y ++G KE +
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFD-------RLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLC 365
F+EM GIRP+ I+FL+V++AC H+G + G Y+E M + + P HY +VDLL
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLG 409
Query: 366 RAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAG 425
RAG+L +A + + + T ++W ALLNAC N ELG A + ELDP + G
Sbjct: 410 RAGDLNRALRFIEEMPIEP----TAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPG 465
Query: 426 ICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
++L N+YA G W++ +R +KE G++K+ CSWV++
Sbjct: 466 PHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEI 506
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 101/239 (42%), Gaps = 50/239 (20%)
Query: 207 DQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQ 266
D+ + L+ CT + GR +H+++L++ D+ + ++L+ MY KCG +++A++
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSI--FRHDIVMGNTLLNMYAKCGSLEEARK 116
Query: 267 VFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVIS 326
VF+ RD V WT+++ Y ++ + + + F +ML G P+ +VI
Sbjct: 117 VFE-------KMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIK 169
Query: 327 A-------------------CGHTGQVHAG-------VKY---------FESMSNEFKLN 351
A CG VH G +Y F+++ + ++
Sbjct: 170 AAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVS 229
Query: 352 PGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGK 410
++ L+ R +KA EL L G S + +L AC G +E GK
Sbjct: 230 -----WNALIAGHARRSGTEKALELFQGMLRDGFRPSHFS-YASLFGACSSTGFLEQGK 282
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 130/392 (33%), Positives = 225/392 (57%), Gaps = 13/392 (3%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+ +I+ + + F ALT F M + D L + ++A + + + G+QIHA
Sbjct: 559 WTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQAC 618
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
G+SS + +ALV LYS+ ++++ L F++ + + NAL+SG+ ++G + L
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
+ +M + + FT +A++A + + ++ G+Q+H+ + +T +D E++V ++LI M
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVC--NALISM 736
Query: 255 YGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGI 314
Y KCG + A++ F V ++NE V W +++ Y ++G E +D F +M+ +
Sbjct: 737 YAKCGSISDAEKQFL--EVSTKNE-----VSWNAIINAYSKHGFGSEALDSFDQMIHSNV 789
Query: 315 RPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAW 374
RP+ + + V+SAC H G V G+ YFESM++E+ L+P PEHY C+VD+L RAG L +A
Sbjct: 790 RPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAK 849
Query: 375 ELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLY 434
E + + K +W LL+ACV N+E+G+ A LEL+P ++ +LLSNLY
Sbjct: 850 EFIQEMPIKP----DALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLY 905
Query: 435 ARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
A WD R +KE+G++K+ G SW++V
Sbjct: 906 AVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 937
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 194/408 (47%), Gaps = 37/408 (9%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHT--NLIAAYATCLPKNHLQTLHNFFKC 66
L C ++L ++LHG +L+ G F D + L++ Y +L + + F
Sbjct: 295 LSACKKIESLEIGEQLHGLVLKLG---FSSDTYVCNALVSLY---FHLGNLISAEHIFSN 348
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
M+ + + +N +I+ + G+ A+ F MH + + D+ L S + A S + G
Sbjct: 349 MSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG 408
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
+Q+HA+ KLG++S+ + AL++LY+K + ++ A F E +N V N +L YG
Sbjct: 409 QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLL 468
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
+ R+M + + +Q+T + L+ C L +ELG Q+HS +++T + + + +
Sbjct: 469 DDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT--NFQLNAY 526
Query: 247 LQSSLIEMYGKCGLVKKAQQVF-KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
+ S LI+MY K G + A + + G +DVV WT+M+ Y + + +
Sbjct: 527 VCSVLIDMYAKLGKLDTAWDILIRFAG--------KDVVSWTTMIAGYTQYNFDDKALTT 578
Query: 306 FKEMLEEGIRPDGIAFLTVISACG------HTGQVHAGVKYFESMSNEFKLNPGPEHYSC 359
F++ML+ GIR D + +SAC Q+HA S++ +
Sbjct: 579 FRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQA-CVSGFSSDLPFQ------NA 631
Query: 360 LVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
LV L R G++++++ QT + N W AL++ GN E
Sbjct: 632 LVTLYSRCGKIEESYLAFEQT--EAGDNIA---WNALVSGFQQSGNNE 674
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 148/290 (51%), Gaps = 16/290 (5%)
Query: 91 ALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVD 150
A+ F M+ + YA S L+A ++ + G+Q+H V KLG+SS +V +ALV
Sbjct: 272 AIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVS 331
Query: 151 LYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFT 210
LY L ++ A +F + +++ V N L++G + G + +EL ++M + L+ D T
Sbjct: 332 LYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 211 LSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKL 270
L++ + AC+ + G+QLH+Y T S+ ++ +L+ +Y KC ++ A F
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYT--TKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 271 DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGH 330
VE +VVLW ML YG + +F++M E I P+ + +++ C
Sbjct: 450 TEVE-------NVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 331 TGQVHAGVK-YFESMSNEFKLNPGPEHYSC--LVDLLCRAGELQKAWELL 377
G + G + + + + F+LN Y C L+D+ + G+L AW++L
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAWDIL 548
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 189/453 (41%), Gaps = 48/453 (10%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
+KLH +L+ G L L L Y L K L F M +N +I
Sbjct: 105 RKLHSQILKLG-LDSNGCLSEKLFDFY---LFKGDLYGAFKVFDEMPERTIFTWNKMIKE 160
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG--KQIHAHVGKLGWS 139
+ F M + NV + L A R V F +QIHA + G
Sbjct: 161 LASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEAC-RGGSVAFDVVEQIHARILYQGLR 219
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
S V + L+DLYS+ V A VFD + K+ A++SG + A+ + L M
Sbjct: 220 DSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDM 279
Query: 200 PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG 259
VL + + S+ L AC + ++E+G QLH VL+ SD ++ ++L+ +Y G
Sbjct: 280 YVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKL--GFSSDTYVCNALVSLYFHLG 337
Query: 260 LVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGI 319
+ A+ +F N RD V + +++ + G ++ ++LFK M +G+ PD
Sbjct: 338 NLISAEHIFS-------NMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSN 390
Query: 320 AFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQ 379
+++ AC G + G + + + + + L++L + +++ A + +
Sbjct: 391 TLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLE 449
Query: 380 TLYKG--MGNCTISMWG----------------------------ALLNACVDCGNIELG 409
T + + N + +G ++L C+ G++ELG
Sbjct: 450 TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELG 509
Query: 410 KLAGQRALELDPH-NAGICILLSNLYARFGMWD 441
+ + ++ + NA +C +L ++YA+ G D
Sbjct: 510 EQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLD 542
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 130/297 (43%), Gaps = 27/297 (9%)
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
G+++H+ + KLG S+ + L D Y + A VFDE+PE+ N ++
Sbjct: 104 GRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKMIKELAS 163
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS-AVELGRQLHSYVLRTTHDIESD 244
L + L +M + ++ T S L AC G S A ++ Q+H+ +L +
Sbjct: 164 RNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL--YQGLRDS 221
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVID 304
+ + LI++Y + G V A++VF DG+ R +D W +M+ +N E I
Sbjct: 222 TVVCNPLIDLYSRNGFVDLARRVF--DGL-----RLKDHSSWVAMISGLSKNECEAEAIR 274
Query: 305 LFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSC--LVD 362
LF +M GI P AF +V+SAC + G + + KL + Y C LV
Sbjct: 275 LFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLV---LKLGFSSDTYVCNALVS 331
Query: 363 LLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALEL 419
L G L A + ++ M + L+N CG G++A+EL
Sbjct: 332 LYFHLGNLISA-----EHIFSNMSQRDAVTYNTLINGLSQCG-------YGEKAMEL 376
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 125/257 (48%), Gaps = 18/257 (7%)
Query: 45 IAAYATCLP-KNHLQTLHN----------FFKCMNSTNPLHFNVIISNFCRKGFPFLALT 93
++ +++ LP +N L TL++ F+ + + + +N ++S F + G AL
Sbjct: 619 VSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALR 678
Query: 94 AFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYS 153
F M+ + + + S + A+S ++ GKQ+HA + K G+ S V +AL+ +Y+
Sbjct: 679 VFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYA 738
Query: 154 KLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSA 213
K S+ DA F E+ KN V NA+++ Y + G ++ L+ +M ++ + TL
Sbjct: 739 KCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVG 798
Query: 214 ALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGV 273
L AC+ + V+ G + + + + +++M + GL+ +A++ + +
Sbjct: 799 VLSACSHIGLVDKGIAYFE-SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPI 857
Query: 274 ESRNERSRDVVLWTSML 290
+ D ++W ++L
Sbjct: 858 KP------DALVWRTLL 868
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 238 bits (608), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 136/391 (34%), Positives = 217/391 (55%), Gaps = 13/391 (3%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N +IS + A F M V +D+ + + + + G+ +H
Sbjct: 124 YNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCV 183
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
K G S V V ++ + +Y K SV+ +FDE+P K + NA++SGY + GL LE
Sbjct: 184 KGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLE 243
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
L +M + D FTL + L +C L A ++G ++ V ++ +VF+ ++ I M
Sbjct: 244 LYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLV--ESNGFVPNVFVSNASISM 301
Query: 255 YGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGI 314
Y +CG + KA+ VF + V+S +V WT+M+G YG +G + + LF +M++ GI
Sbjct: 302 YARCGNLAKARAVFDIMPVKS-------LVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGI 354
Query: 315 RPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAW 374
RPDG F+ V+SAC H+G G++ F +M E+KL PGPEHYSCLVDLL RAG L +A
Sbjct: 355 RPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAM 414
Query: 375 ELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLY 434
E + + G ++WGALL AC N+++ +LA + +E +P+N G +L+SN+Y
Sbjct: 415 EFIESMPVEPDG----AVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIY 470
Query: 435 ARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
+ + I +RV+++ER RK G S+V+
Sbjct: 471 SDSKNQEGIWRIRVMMRERAFRKKPGYSYVE 501
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 151/305 (49%), Gaps = 20/305 (6%)
Query: 96 SFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKL 155
S + + + P D ++ L + + ++ G+Q+H HV K G + FV +AL+ +Y K
Sbjct: 43 SMLRSGSSP-DAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKC 101
Query: 156 SSVKDAALVFDEIPEKN--TVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSA 213
V DA VF+E P+ + +VC NAL+SGY + R+M + D T+
Sbjct: 102 GLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLG 161
Query: 214 ALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGV 273
+ CT + LGR LH ++ D S+V + +S I MY KCG V+ +++F V
Sbjct: 162 LVPLCTVPEYLWLGRSLHGQCVKGGLD--SEVAVLNSFITMYMKCGSVEAGRRLFDEMPV 219
Query: 274 ESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQ 333
+ ++ W +++ Y +NG +V++L+++M G+ PD ++V+S+C H G
Sbjct: 220 -------KGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGA 272
Query: 334 VHAGVKYFESM-SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISM 392
G + + + SN F N + S + + R G L KA + ++ M ++
Sbjct: 273 KKIGHEVGKLVESNGFVPNVFVSNAS--ISMYARCGNLAKA-----RAVFDIMPVKSLVS 325
Query: 393 WGALL 397
W A++
Sbjct: 326 WTAMI 330
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 74/152 (48%), Gaps = 7/152 (4%)
Query: 177 NALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLR 236
N L L+++ + L R M D F+ L++C LS G+QLH +V
Sbjct: 22 NVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHV-- 79
Query: 237 TTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRN 296
T E++ F+ ++LI MY KCGLV A++VF E + S+ V + +++ Y N
Sbjct: 80 TKGGCETEPFVLTALISMYCKCGLVADARKVF-----EENPQSSQLSVCYNALISGYTAN 134
Query: 297 GKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC 328
K + +F+ M E G+ D + L ++ C
Sbjct: 135 SKVTDAAYMFRRMKETGVSVDSVTMLGLVPLC 166
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 238 bits (608), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 131/364 (35%), Positives = 215/364 (59%), Gaps = 19/364 (5%)
Query: 107 TYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFD 166
TY L + + + VN + GK+IHAH+ + G+SS V++ + LVD+Y++ V A+ VF
Sbjct: 182 TYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFG 241
Query: 167 EIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQ----FTLSAALRACTGLS 222
+P +N V +A+++ Y + G + L R+M +R D T+ + L+AC L+
Sbjct: 242 GMPVRNVVSWSAMIACYAKNGKAFEALRTFREM--MRETKDSSPNSVTMVSVLQACASLA 299
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRD 282
A+E G+ +H Y+LR ++S + + S+L+ MYG+CG ++ Q+VF RD
Sbjct: 300 ALEQGKLIHGYILR--RGLDSILPVISALVTMYGRCGKLEVGQRVFD-------RMHDRD 350
Query: 283 VVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFE 342
VV W S++ YG +G K+ I +F+EML G P + F++V+ AC H G V G + FE
Sbjct: 351 VVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFE 410
Query: 343 SMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVD 402
+M + + P EHY+C+VDLL RA L +A +++ Q + G +WG+LL +C
Sbjct: 411 TMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMV-QDMRTEPGP---KVWGSLLGSCRI 466
Query: 403 CGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCS 462
GN+EL + A +R L+P NAG +LL+++YA MWDE+ ++ +++ RGL+K G
Sbjct: 467 HGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRC 526
Query: 463 WVQV 466
W++V
Sbjct: 527 WMEV 530
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 156/330 (47%), Gaps = 25/330 (7%)
Query: 76 NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
N +I + C++G A+ S ++ TY L + + ++ ++H H+
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLS--QESSPSQQTYELL--ILCCGHRSSLSDALRVHRHILD 105
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLEL 195
G F+ + L+ +YS L SV A VFD+ ++ NAL AG + L L
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 196 VRKMPVLRLKYDQFTLSAALRACTG----LSAVELGRQLHSYVLRTTHDIESDVFLQSSL 251
KM + ++ D+FT + L+AC ++ + G+++H+++ R + S V++ ++L
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYS--SHVYIMTTL 223
Query: 252 IEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLE 311
++MY + G V A VF G+ RN VV W++M+ Y +NGK E + F+EM+
Sbjct: 224 VDMYARFGCVDYASYVF--GGMPVRN-----VVSWSAMIACYAKNGKAFEALRTFREMMR 276
Query: 312 E--GIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGE 369
E P+ + ++V+ AC + G K L+ S LV + R G+
Sbjct: 277 ETKDSSPNSVTMVSVLQACASLAALEQG-KLIHGYILRRGLDSILPVISALVTMYGRCGK 335
Query: 370 LQKAWELLNQTLYKGMGNCTISMWGALLNA 399
L+ + Q ++ M + + W +L+++
Sbjct: 336 LE-----VGQRVFDRMHDRDVVSWNSLISS 360
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 129/272 (47%), Gaps = 13/272 (4%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
K++H +L R G ++ + T L+ YA ++ + F M N + ++ +I+
Sbjct: 202 KEIHAHLTRRGYSSHVY-IMTTLVDMYARFGCVDYASYV---FGGMPVRNVVSWSAMIAC 257
Query: 82 FCRKGFPFLALTAFSFM--HTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWS 139
+ + G F AL F M T + ++ + S L A + + + GK IH ++ + G
Sbjct: 258 YAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLD 317
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
S + V SALV +Y + ++ VFD + +++ V N+L+S YG G + +++ +M
Sbjct: 318 SILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEM 377
Query: 200 PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG 259
T + L AC+ VE G++L + R H I+ + + ++++ G+
Sbjct: 378 LANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWR-DHGIKPQIEHYACMVDLLGRAN 436
Query: 260 LVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
+ +A ++ + + R E V W S+LG
Sbjct: 437 RLDEAAKMVQ----DMRTEPGPKV--WGSLLG 462
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 134/406 (33%), Positives = 222/406 (54%), Gaps = 14/406 (3%)
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
F + + + +I F R G A+ F M V + + S L A+ +V
Sbjct: 159 RLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVE 218
Query: 122 DVNFGKQIHAHVGKLGW-SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALL 180
DV FG+ +H + G VF+GS+LVD+Y K S DA VFDE+P +N V AL+
Sbjct: 219 DVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALI 278
Query: 181 SGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD 240
+GY ++ + +G+ + +M + ++ TLS+ L AC + A+ GR++H Y+++ +
Sbjct: 279 AGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNS-- 336
Query: 241 IESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
IE + ++LI++Y KCG +++A VF E +E+ +V WT+M+ + +G +
Sbjct: 337 IEINTTAGTTLIDLYVKCGCLEEAILVF-----ERLHEK--NVYTWTAMINGFAAHGYAR 389
Query: 301 EVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL 360
+ DLF ML + P+ + F+ V+SAC H G V G + F SM F + P +HY+C+
Sbjct: 390 DAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACM 449
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELD 420
VDL R G L++A L+ + + T +WGAL +C+ + ELGK A R ++L
Sbjct: 450 VDLFGRKGLLEEAKALIERMPMEP----TNVVWGALFGSCLLHKDYELGKYAASRVIKLQ 505
Query: 421 PHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
P ++G LL+NLY+ WDE+ +R +K++ + K G SW++V
Sbjct: 506 PSHSGRYTLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEV 551
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 153/312 (49%), Gaps = 21/312 (6%)
Query: 90 LALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALV 149
L+ A+ M N V + L A ++ D N Q HAH+ K G S FV ++L+
Sbjct: 87 LSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDSN-PFQFHAHIVKFGLDSDPFVRNSLI 145
Query: 150 DLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQF 209
YS A+ +FD +K+ V A++ G+ G ++ + +M + ++
Sbjct: 146 SGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEM 205
Query: 210 TLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFK 269
T+ + L+A + V GR +H L T ++ DVF+ SSL++MYGKC AQ+VF
Sbjct: 206 TVVSVLKAAGKVEDVRFGRSVHGLYLETGR-VKCDVFIGSSLVDMYGKCSCYDDAQKVF- 263
Query: 270 LDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG 329
D + SRN VV WT+++ Y ++ + + + +F+EML+ + P+ +V+SAC
Sbjct: 264 -DEMPSRN-----VVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACA 317
Query: 330 HTGQVHAGVK---YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMG 386
H G +H G + Y S E G + L+DL + G L++A +++ +
Sbjct: 318 HVGALHRGRRVHCYMIKNSIEINTTAG----TTLIDLYVKCGCLEEAI-----LVFERLH 368
Query: 387 NCTISMWGALLN 398
+ W A++N
Sbjct: 369 EKNVYTWTAMIN 380
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 136/288 (47%), Gaps = 10/288 (3%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNF 63
+++ L +++ + +HG L TG + + ++L+ Y C + Q +
Sbjct: 206 TVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKV--- 262
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F M S N + + +I+ + + + F M ++V + L S L+A + V +
Sbjct: 263 FDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGAL 322
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
+ G+++H ++ K + G+ L+DLY K +++A LVF+ + EKN A+++G+
Sbjct: 323 HRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGF 382
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
G +L M + ++ T A L AC VE GR+L ++ ++E
Sbjct: 383 AAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLF-LSMKGRFNMEP 441
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
+ +++++G+ GL+++A+ + + +E N V+W ++ G
Sbjct: 442 KADHYACMVDLFGRKGLLEEAKALIERMPMEPTN------VVWGALFG 483
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 131/407 (32%), Positives = 217/407 (53%), Gaps = 13/407 (3%)
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
+ F+ M+ + + FN + + R P + F + + + D Y S L A +
Sbjct: 84 HLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAK 143
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
+ G+Q+H KLG +V+V L+++Y++ V A VFD I E VC NA+++
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMIT 203
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
GY + L L R+M LK ++ TL + L +C L +++LG+ +H Y + H
Sbjct: 204 GYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKK--HSF 261
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
V + ++LI+M+ KCG + A +F+ R +D W++M+ Y +GK ++
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFE-------KMRYKDTQAWSAMIVAYANHGKAEK 314
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
+ +F+ M E ++PD I FL +++AC HTG+V G KYF M ++F + P +HY +V
Sbjct: 315 SMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMV 374
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDP 421
DLL RAG L+ A+E +++ T +W LL AC N++L + +R ELD
Sbjct: 375 DLLSRAGNLEDAYEFIDKLPISP----TPMLWRILLAACSSHNNLDLAEKVSERIFELDD 430
Query: 422 HNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQVTS 468
+ G ++LSNLYAR W+ + LR V+K+R K GCS ++V +
Sbjct: 431 SHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNN 477
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 236 bits (601), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 143/436 (32%), Positives = 243/436 (55%), Gaps = 25/436 (5%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFM- 98
+ + LI Y+TC L+ F + N + + +I + G A++ F +
Sbjct: 113 VSSALIVMYSTC---GKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDLL 169
Query: 99 -----HTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYS 153
+ + LD+ L S ++A SRV + IH+ V K G+ V VG+ L+D Y+
Sbjct: 170 VDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYA 229
Query: 154 K--LSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRL-KYDQFT 210
K V A +FD+I +K+ V N+++S Y ++G+ + E+ R++ ++ ++ T
Sbjct: 230 KGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAIT 289
Query: 211 LSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKL 270
LS L A + A+ +G+ +H V+R +E DV + +S+I+MY KCG V+ A++ F
Sbjct: 290 LSTVLLAVSHSGALRIGKCIHDQVIRMG--LEDDVIVGTSIIDMYCKCGRVETARKAF-- 345
Query: 271 DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGH 330
D ++++N RS WT+M+ YG +G + ++LF M++ G+RP+ I F++V++AC H
Sbjct: 346 DRMKNKNVRS-----WTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSH 400
Query: 331 TGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTI 390
G G ++F +M F + PG EHY C+VDLL RAG LQKA++L+ + K
Sbjct: 401 AGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP----DS 456
Query: 391 SMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVI 450
+W +LL AC N+EL +++ R ELD N G +LLS++YA G W ++ +R+++
Sbjct: 457 IIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIM 516
Query: 451 KERGLRKDVGCSWVQV 466
K RGL K G S +++
Sbjct: 517 KNRGLVKPPGFSLLEL 532
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 168/353 (47%), Gaps = 26/353 (7%)
Query: 54 KNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCST 113
+ +L TL N + ++ T+ +N +I++ R G AL AFS M ++ +
Sbjct: 25 RQNLTTLFNRY--VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCA 82
Query: 114 LTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNT 173
+ A S + D+ GKQ H G+ S +FV SAL+ +YS ++DA VFDEIP++N
Sbjct: 83 IKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNI 142
Query: 174 VCANALLSGYGEAGLWAQGLELVRKMPVLR------LKYDQFTLSAALRACTGLSAVELG 227
V +++ GY G + L + + V + D L + + AC+ + A L
Sbjct: 143 VSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLT 202
Query: 228 RQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGL--VKKAQQVFKLDGVESRNERSRDVVL 285
+HS+V++ D V + ++L++ Y K G V A+++F D + +D V
Sbjct: 203 ESIHSFVIKRGFD--RGVSVGNTLLDAYAKGGEGGVAVARKIF--DQIV-----DKDRVS 253
Query: 286 WTSMLGVYGRNGKYKEVIDLFKEMLEEGIRP-DGIAFLTVISACGHTGQVHAGVKYFESM 344
+ S++ VY ++G E ++F+ +++ + + I TV+ A H+G + G K
Sbjct: 254 YNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIG-KCIHDQ 312
Query: 345 SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
L + ++D+ C+ G ++ A + ++ M N + W A++
Sbjct: 313 VIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDR-----MKNKNVRSWTAMI 360
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 235 bits (599), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 135/402 (33%), Positives = 221/402 (54%), Gaps = 23/402 (5%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
++ IS + ++G + AL M ++ + + L S L+ + V + GK+IH +
Sbjct: 333 WSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAI 392
Query: 135 KL-------GWSSSVFVGSALVDLYSKLSSVKDAALVFDEIP--EKNTVCANALLSGYGE 185
K G V + L+D+Y+K V A +FD + E++ V ++ GY +
Sbjct: 393 KYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQ 452
Query: 186 AGLWAQGLELVRKM--PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
G + LEL+ +M + + + FT+S AL AC L+A+ +G+Q+H+Y LR +
Sbjct: 453 HGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQN-AV 511
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
+F+ + LI+MY KCG + A+ VF D + ++NE V WTS++ YG +G +E +
Sbjct: 512 PLFVSNCLIDMYAKCGSISDARLVF--DNMMAKNE-----VTWTSLMTGYGMHGYGEEAL 564
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
+F EM G + DG+ L V+ AC H+G + G++YF M F ++PGPEHY+CLVDL
Sbjct: 565 GIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDL 624
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHN 423
L RAG L A L+ + + +W A L+ C G +ELG+ A ++ EL ++
Sbjct: 625 LGRAGRLNAALRLIEEMPMEP----PPVVWVAFLSCCRIHGKVELGEYAAEKITELASNH 680
Query: 424 AGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
G LLSNLYA G W ++ +R +++ +G++K GCSWV+
Sbjct: 681 DGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 164/326 (50%), Gaps = 16/326 (4%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCM 67
F+H+C K +S +K +H LL G L +L ++LI+ Y + +H +L F
Sbjct: 34 FIHKC---KTISQVKLIHQKLLSFGILTL--NLTSHLISTYISVGCLSHAVSLLRRFPPS 88
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGK 127
++ H+N +I ++ G L F MH+ + D Y A ++ V G+
Sbjct: 89 DA-GVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGE 147
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
HA G+ S+VFVG+ALV +YS+ S+ DA VFDE+ + V N+++ Y + G
Sbjct: 148 SAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLG 207
Query: 188 LWAQGLELVRKMP-VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
LE+ +M + D TL L C L LG+QLH + + T ++ ++F
Sbjct: 208 KPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAV--TSEMIQNMF 265
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
+ + L++MY KCG++ +A VF N +DVV W +M+ Y + G++++ + LF
Sbjct: 266 VGNCLVDMYAKCGMMDEANTVFS-------NMSVKDVVSWNAMVAGYSQIGRFEDAVRLF 318
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTG 332
++M EE I+ D + + IS G
Sbjct: 319 EKMQEEKIKMDVVTWSAAISGYAQRG 344
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 169/385 (43%), Gaps = 55/385 (14%)
Query: 44 LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNV 103
L+A Y+ C L F M+ + + +N II ++ + G P +AL FS M TN
Sbjct: 168 LVAMYSRC---RSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRM-TNEF 223
Query: 104 PL--DTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
D L + L + + + GKQ+H ++FVG+ LVD+Y+K + +A
Sbjct: 224 GCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEA 283
Query: 162 ALVFDEIPEKNTVCANAL-----------------------------------LSGYGEA 186
VF + K+ V NA+ +SGY +
Sbjct: 284 NTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQR 343
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE---- 242
GL + L + R+M +K ++ TL + L C + A+ G+++H Y ++ D+
Sbjct: 344 GLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGH 403
Query: 243 -SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
+ + + LI+MY KC V A+ +F +S + + RDVV WT M+G Y ++G +
Sbjct: 404 GDENMVINQLIDMYAKCKKVDTARAMF-----DSLSPKERDVVTWTVMIGGYSQHGDANK 458
Query: 302 VIDLFKEMLEEG--IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYS- 358
++L EM EE RP+ + AC + G K + + + N P S
Sbjct: 459 ALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIG-KQIHAYALRNQQNAVPLFVSN 517
Query: 359 CLVDLLCRAGELQKAWELLNQTLYK 383
CL+D+ + G + A + + + K
Sbjct: 518 CLIDMYAKCGSISDARLVFDNMMAK 542
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 141/462 (30%), Positives = 243/462 (52%), Gaps = 21/462 (4%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L C + L ++HG L+ G + ++ +L+ Y+ C N + + F+ +
Sbjct: 114 LKACGLLNALEKGLQIHGFCLKIG-FEMMVEVGNSLVDMYSKCGRINEAEKV---FRRIV 169
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVP--LDTYALCSTLTASSRVNDVNFG 126
+ + +N +I+ F G+ AL F M N+ D + L S L A S + G
Sbjct: 170 DRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAG 229
Query: 127 KQIHAHVGKLGW--SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYG 184
KQIH + + G+ SS + +LVDLY K + A FD+I EK + ++L+ GY
Sbjct: 230 KQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYA 289
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESD 244
+ G + + + L +++ L + D F LS+ + + + G+Q+ + ++ +E+
Sbjct: 290 QEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS 349
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVID 304
V +S+++MY KCGLV +A++ F + +DV+ WT ++ YG++G K+ +
Sbjct: 350 VL--NSVVDMYLKCGLVDEAEKCFA-------EMQLKDVISWTVVITGYGKHGLGKKSVR 400
Query: 305 LFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLL 364
+F EML I PD + +L V+SAC H+G + G + F + + P EHY+C+VDLL
Sbjct: 401 IFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLL 460
Query: 365 CRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNA 424
RAG L++A L++ K + +W LL+ C G+IELGK G+ L +D N
Sbjct: 461 GRAGRLKEAKHLIDTMPIKP----NVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNP 516
Query: 425 GICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+++SNLY + G W+E G+ R + +GL+K+ G SWV++
Sbjct: 517 ANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEI 558
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 189/377 (50%), Gaps = 20/377 (5%)
Query: 23 KLHGNLLRTGTLFFLHDLHTN-LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
++H LL++G+ L + +N LI Y C + L + F M N + ++ ++S
Sbjct: 27 QVHCYLLKSGSGLNL--ITSNYLIDMYCKC--REPLMA-YKVFDSMPERNVVSWSALMSG 81
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
G +L+ FS M + + + + L A +N + G QIH K+G+
Sbjct: 82 HVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 141
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV 201
V VG++LVD+YSK + +A VF I +++ + NA+++G+ AG ++ L+ M
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQE 201
Query: 202 LRLKY--DQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG 259
+K D+FTL++ L+AC+ + G+Q+H +++R+ S + SL+++Y KCG
Sbjct: 202 ANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCG 261
Query: 260 LVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGI 319
+ A++ F D + + + ++ W+S++ Y + G++ E + LFK + E + D
Sbjct: 262 YLFSARKAF--DQI-----KEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSF 314
Query: 320 AFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEH--YSCLVDLLCRAGELQKAWELL 377
A ++I + G K ++++ KL G E + +VD+ + G + +A +
Sbjct: 315 ALSSIIGVFADFALLRQG-KQMQALA--VKLPSGLETSVLNSVVDMYLKCGLVDEAEKCF 371
Query: 378 NQTLYKGMGNCTISMWG 394
+ K + + T+ + G
Sbjct: 372 AEMQLKDVISWTVVITG 388
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 137/286 (47%), Gaps = 12/286 (4%)
Query: 103 VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAA 162
+P L S L +R + G Q+H ++ K G ++ + L+D+Y K A
Sbjct: 2 IPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAY 61
Query: 163 LVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS 222
VFD +PE+N V +AL+SG+ G L L +M + ++FT S L+AC L+
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLN 121
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRD 282
A+E G Q+H + L+ ++ +V +SL++MY KCG + +A++VF R R
Sbjct: 122 ALEKGLQIHGFCLKIGFEMMVEV--GNSLVDMYSKCGRINEAEKVF-------RRIVDRS 172
Query: 283 VVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGI--RPDGIAFLTVISACGHTGQVHAGVKY 340
++ W +M+ + G + +D F M E I RPD +++ AC TG ++AG +
Sbjct: 173 LISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQI 232
Query: 341 FESMSNE-FKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGM 385
+ F LVDL + G L A + +Q K M
Sbjct: 233 HGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTM 278
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 150/317 (47%), Gaps = 19/317 (5%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHT---NLIAAYATCLPKNHLQTL 60
++ L C T + A K++HG L+R+G F T +L+ Y C +L +
Sbjct: 212 TLTSLLKACSSTGMIYAGKQIHGFLVRSG--FHCPSSATITGSLVDLYVKC---GYLFSA 266
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV 120
F + + ++ +I + ++G A+ F + N +D++AL S + +
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADF 326
Query: 121 NDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALL 180
+ GKQ+ A KL V +++VD+Y K V +A F E+ K+ + ++
Sbjct: 327 ALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVI 386
Query: 181 SGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD 240
+GYG+ GL + + + +M ++ D+ A L AC+ ++ G +L S +L TH
Sbjct: 387 TGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLE-THG 445
Query: 241 IESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
I+ V + ++++ G+ G +K+A+ + ++ +V +W ++L + +G
Sbjct: 446 IKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKP------NVGIWQTLLSLCRVHGD-- 497
Query: 301 EVIDLFKEMLEEGIRPD 317
I+L KE+ + +R D
Sbjct: 498 --IELGKEVGKILLRID 512
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/444 (32%), Positives = 234/444 (52%), Gaps = 19/444 (4%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
K++HG L++G + L + ++L Y+ C L+ + F+ + + + +IS
Sbjct: 470 KQVHGYTLKSGLVLDL-TVGSSLFTLYSKC---GSLEESYKLFQGIPFKDNACWASMISG 525
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
F G+ A+ FS M + D L + LT S + GK+IH + + G
Sbjct: 526 FNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKG 585
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV 201
+ +GSALV++YSK S+K A V+D +PE + V ++L+SGY + GL G L R M +
Sbjct: 586 MDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVM 645
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
D F +S+ L+A LG Q+H+Y+ + E V SSL+ MY K G +
Sbjct: 646 SGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSV--GSSLLTMYSKFGSI 703
Query: 262 KKAQQVF-KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIA 320
+ F +++G D++ WT+++ Y ++GK E + ++ M E+G +PD +
Sbjct: 704 DDCCKAFSQING--------PDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVT 755
Query: 321 FLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQT 380
F+ V+SAC H G V + SM ++ + P HY C+VD L R+G L++A +N
Sbjct: 756 FVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNM 815
Query: 381 LYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMW 440
K +WG LL AC G +ELGK+A ++A+EL+P +AG I LSN+ A G W
Sbjct: 816 HIKP----DALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEW 871
Query: 441 DEIGHLRVVIKERGLRKDVGCSWV 464
DE+ R ++K G++K+ G S V
Sbjct: 872 DEVEETRKLMKGTGVQKEPGWSSV 895
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 138/267 (51%), Gaps = 18/267 (6%)
Query: 76 NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
NV+I++F + P A+ F+ M + D +++CS L S ++ +N GKQ+H + K
Sbjct: 422 NVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLK 478
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLEL 195
G + VGS+L LYSK S++++ +F IP K+ C +++SG+ E G + + L
Sbjct: 479 SGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGL 538
Query: 196 VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
+M D+ TL+A L C+ ++ G+++H Y LR D D L S+L+ MY
Sbjct: 539 FSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMD--LGSALVNMY 596
Query: 256 GKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIR 315
KCG +K A+QV+ D V +S++ Y ++G ++ LF++M+ G
Sbjct: 597 SKCGSLKLARQVYD-------RLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFT 649
Query: 316 PDGIAFLTVISACGHT------GQVHA 336
D A +++ A + QVHA
Sbjct: 650 MDSFAISSILKAAALSDESSLGAQVHA 676
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 152/328 (46%), Gaps = 19/328 (5%)
Query: 17 NLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFN 76
NL K L +LLR L F L +L++ Y+ + F + + + N
Sbjct: 63 NLRTTKILQAHLLRRYLLPFDVFLTKSLLSWYSN---SGSMADAAKLFDTIPQPDVVSCN 119
Query: 77 VIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKL 136
++IS + + +L FS MH + + S ++A S + F + + H K+
Sbjct: 120 IMISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKM 179
Query: 137 GWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELV 196
G+ V SAL+D++SK +DA VF + N C N +++G + +L
Sbjct: 180 GYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLF 239
Query: 197 RKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYG 256
+M V K D +T S+ L AC L + G+ + + V++ + DVF+ ++++++Y
Sbjct: 240 HEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAE---DVFVCTAIVDLYA 296
Query: 257 KCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRP 316
KCG + +A +VF SR VV WT ML Y ++ +++FKEM G+
Sbjct: 297 KCGHMAEAMEVF------SRIPNP-SVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEI 349
Query: 317 DGIAFLTVISACG------HTGQVHAGV 338
+ +VISACG QVHA V
Sbjct: 350 NNCTVTSVISACGRPSMVCEASQVHAWV 377
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 167/353 (47%), Gaps = 24/353 (6%)
Query: 35 FFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTA 94
FF + + LI ++ L + + F+ S N +N II+ R
Sbjct: 182 FFYEVVESALIDVFSKNL---RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 95 FSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSK 154
F M D+Y S L A + + + FGK + A V K G + VFV +A+VDLY+K
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCG-AEDVFVCTAIVDLYAK 297
Query: 155 LSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAA 214
+ +A VF IP + V +LSGY ++ LE+ ++M ++ + T+++
Sbjct: 298 CGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSV 357
Query: 215 LRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFK-LDGV 273
+ AC S V Q+H++V ++ ++S V ++LI MY K G + ++QVF+ LD +
Sbjct: 358 ISACGRPSMVCEASQVHAWVFKSGFYLDSSV--AAALISMYSKSGDIDLSEQVFEDLDDI 415
Query: 274 ESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISA--CGHT 331
+ +N + M+ + ++ K + I LF ML+EG+R D + +++S C +
Sbjct: 416 QRQN-------IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNL 468
Query: 332 G-QVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYK 383
G QVH Y L G S L L + G L+++++L +K
Sbjct: 469 GKQVHG---YTLKSGLVLDLTVG----SSLFTLYSKCGSLEESYKLFQGIPFK 514
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 147/499 (29%), Positives = 251/499 (50%), Gaps = 65/499 (13%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLI-AAYATCLPKNHLQTLHN 62
++I L C KN++ + +H ++RT HD ++ C + + ++
Sbjct: 31 TLISVLRSC---KNIAHVPSIHAKIIRT-----FHDQDAFVVFELIRVCSTLDSVDYAYD 82
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F +++ N + +I F G ++ + M N+V D Y + S L A D
Sbjct: 83 VFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----D 138
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ ++IHA V KLG+ SS VG ++++Y K + +A +FDE+P+++ V A +++
Sbjct: 139 LKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINC 198
Query: 183 YGEAGL------------------WA-------------QGLELVRKMPVLRLKYDQFTL 211
Y E G W + LEL R+M + + ++FT
Sbjct: 199 YSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTA 258
Query: 212 SAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLD 271
L AC+ L A+ELGR +HS+V +E F+ ++LI MY +CG + +A++VF++
Sbjct: 259 VCVLSACSDLGALELGRWVHSFV--ENQRMELSNFVGNALINMYSRCGDINEARRVFRV- 315
Query: 272 GVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHT 331
R +DV+ + +M+ +G E I+ F++M+ G RP+ + + +++AC H
Sbjct: 316 ------MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHG 369
Query: 332 GQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTIS 391
G + G++ F SM F + P EHY C+VDLL R G L++A Y+ + N I
Sbjct: 370 GLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEA--------YRFIENIPIE 421
Query: 392 ----MWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLR 447
M G LL+AC GN+ELG+ +R E + ++G +LLSNLYA G W E +R
Sbjct: 422 PDHIMLGTLLSACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIR 481
Query: 448 VVIKERGLRKDVGCSWVQV 466
+++ G+ K+ GCS ++V
Sbjct: 482 ESMRDSGIEKEPGCSTIEV 500
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 234 bits (596), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 145/462 (31%), Positives = 241/462 (52%), Gaps = 55/462 (11%)
Query: 44 LIAAYATCLPKNHLQTLHNFFKCMNST----NPLHFNVIISNFCRKGFPFLALTAFSFMH 99
L+ AYA K L+ + M S+ N + +N I+S F R G+ A+ F +H
Sbjct: 188 LLCAYAR---KGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIH 244
Query: 100 TNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVK 159
D + S L + +N G+ IH +V K G V SA++D+Y K V
Sbjct: 245 HLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVY 304
Query: 160 DAALVFDEIP-----------------------------------EKNTVCANALLSGYG 184
+F++ E N V ++++G
Sbjct: 305 GIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCA 364
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESD 244
+ G + LEL R+M V +K + T+ + L AC ++A+ GR H + +R + +
Sbjct: 365 QNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRV--HLLDN 422
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVID 304
V + S+LI+MY KCG + +Q VF + ++++V W S++ + +GK KEV+
Sbjct: 423 VHVGSALIDMYAKCGRINLSQIVFNM-------MPTKNLVCWNSLMNGFSMHGKAKEVMS 475
Query: 305 LFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLL 364
+F+ ++ ++PD I+F +++SACG G G KYF+ MS E+ + P EHYSC+V+LL
Sbjct: 476 IFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLL 535
Query: 365 CRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNA 424
RAG+LQ+A++L+ + ++ +C +WGALLN+C N++L ++A ++ L+P N
Sbjct: 536 GRAGKLQEAYDLIKEMPFEP-DSC---VWGALLNSCRLQNNVDLAEIAAEKLFHLEPENP 591
Query: 425 GICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
G +LLSN+YA GMW E+ +R ++ GL+K+ GCSW+QV
Sbjct: 592 GTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQV 633
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 157/375 (41%), Gaps = 77/375 (20%)
Query: 91 ALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVD 150
++ FS M ++ + D++ L + + ++ GKQIH G FV ++
Sbjct: 100 SIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFH 159
Query: 151 LYSKLSSVKDAALVFDEIPEKNTV------CA---------------------------- 176
+Y + + DA VFD + +K+ V CA
Sbjct: 160 MYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVS 219
Query: 177 -NALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVL 235
N +LSG+ +G + + + +K+ L DQ T+S+ L + + +GR +H YV+
Sbjct: 220 WNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVI 279
Query: 236 RTTHDIESDVFLQSSLIEMYGKC-------------------------------GLVKKA 264
+ + D + S++I+MYGK GLV KA
Sbjct: 280 K--QGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 265 QQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTV 324
++F+L ++ +VV WTS++ +NGK E ++LF+EM G++P+ + ++
Sbjct: 338 LEMFELFKEQT---MELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSM 394
Query: 325 ISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKG 384
+ ACG+ + G + + L S L+D+ + G + L+Q ++
Sbjct: 395 LPACGNIAALGHG-RSTHGFAVRVHLLDNVHVGSALIDMYAKCGRIN-----LSQIVFNM 448
Query: 385 MGNCTISMWGALLNA 399
M + W +L+N
Sbjct: 449 MPTKNLVCWNSLMNG 463
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 157/348 (45%), Gaps = 29/348 (8%)
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
Q HA + K G + ++ + L+ YS + DA LV IP+ ++L+ +A
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAK 95
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
L+ Q + + +M L D L + C LSA ++G+Q+H + ++ D F+
Sbjct: 96 LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIH--CVSCVSGLDMDAFV 153
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
Q S+ MY +CG + A++VF +DVV +++L Y R G +EV+ +
Sbjct: 154 QGSMFHMYMRCGRMGDARKVFD-------RMSDKDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 308 EMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRA 367
EM GI + +++ ++S +G V F+ + + L P+ + + +L
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH---LGFCPDQVT-VSSVLPSV 262
Query: 368 GELQKAWELLNQ-TLYKGMGNCTISMWGALLNACVDCGNIEL----GKLAGQRAL--ELD 420
G+ E+LN L G + G L + CV I++ G + G +L + +
Sbjct: 263 GD----SEMLNMGRLIHGY----VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFE 314
Query: 421 PHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQVTS 468
AG+C +R G+ D+ + + KE+ + +V SW + +
Sbjct: 315 MMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV-VSWTSIIA 361
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/492 (29%), Positives = 253/492 (51%), Gaps = 50/492 (10%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCM 67
FL+ + LS +K++H +++ +G L + L +L+ Y + + F M
Sbjct: 136 FLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFY---MELGNFGVAEKVFARM 192
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGK 127
+ FNV+I + ++GF AL + M ++ + D Y + S L ++D+ GK
Sbjct: 193 PHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Query: 128 QIHAHVGKLG--WSSSVFVGSALVDLYSK------------------------------- 154
+H + + G +SS++ + +AL+D+Y K
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVR 312
Query: 155 LSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGL-ELVRKMPVL-RLKYDQFTLS 212
L ++ A VFD++P+++ V N+LL GY + G + + EL +M ++ ++K D+ T+
Sbjct: 313 LGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 213 AALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDG 272
+ + + GR +H V+R ++ D FL S+LI+MY KCG++++A VFK
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRL--QLKGDAFLSSALIDMYCKCGIIERAFMVFK--- 427
Query: 273 VESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTG 332
+DV LWTSM+ +G ++ + LF M EEG+ P+ + L V++AC H+G
Sbjct: 428 ----TATEKDVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSG 483
Query: 333 QVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISM 392
V G+ F M ++F +P EHY LVDLLCRAG +++A +++ + + + SM
Sbjct: 484 LVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQKKMPM---RPSQSM 540
Query: 393 WGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKE 452
WG++L+AC +IE +LA L+L+P G +LLSN+YA G W R ++
Sbjct: 541 WGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIYATVGRWGYSDKTREAMEN 600
Query: 453 RGLRKDVGCSWV 464
RG++K G S V
Sbjct: 601 RGVKKTAGYSSV 612
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 182/405 (44%), Gaps = 45/405 (11%)
Query: 42 TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN 101
+ LI A P+N F + N +N +IS L +S M +
Sbjct: 70 SRLIFFSAITYPENLDLAKLLFLNFTPNPNVFVYNTMISAVSSSKNECFGL--YSSMIRH 127
Query: 102 NVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG-WSSSVFVGSALVDLYSKLSSVKD 160
V D + ASS +++V KQIH H+ G S ++ ++LV Y +L +
Sbjct: 128 RVSPDRQTFLYLMKASSFLSEV---KQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGV 184
Query: 161 AALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTG 220
A VF +P + N ++ GY + G + L+L KM ++ D++T+ + L C
Sbjct: 185 AEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGH 244
Query: 221 LSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC---GLVKKAQQVFKLDGVESRN 277
LS + LG+ +H ++ R S++ L ++L++MY KC GL K+A K + S N
Sbjct: 245 LSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWN 304
Query: 278 ER---------------------SRDVVLWTSMLGVYGRNG-KYKEVIDLFKEM-LEEGI 314
RD+V W S+L Y + G + V +LF EM + E +
Sbjct: 305 TMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKV 364
Query: 315 RPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAW 374
+PD + +++IS + G++ G ++ + +L S L+D+ C+ G +++A+
Sbjct: 365 KPDRVTMVSLISGAANNGELSHG-RWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAF 423
Query: 375 ELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALEL 419
++K +++W +++ GN GQ+AL+L
Sbjct: 424 -----MVFKTATEKDVALWTSMITGLAFHGN-------GQQALQL 456
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 129/428 (30%), Positives = 235/428 (54%), Gaps = 14/428 (3%)
Query: 41 HTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHT 100
+T LI YA+ + +++ F + + + +N +IS + G AL F M
Sbjct: 203 YTALIKGYAS---RGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMK 259
Query: 101 NNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKD 160
NV D + + ++A ++ + G+Q+H + G+ S++ + +AL+DLYSK ++
Sbjct: 260 TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELET 319
Query: 161 AALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTG 220
A +F+ +P K+ + N L+ GY L+ + L L ++M + T+ + L AC
Sbjct: 320 ACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAH 379
Query: 221 LSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS 280
L A+++GR +H Y+ + + + L++SLI+MY KCG ++ A QVF +
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFN-------SILH 432
Query: 281 RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKY 340
+ + W +M+ + +G+ DLF M + GI+PD I F+ ++SAC H+G + G
Sbjct: 433 KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
Query: 341 FESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNAC 400
F +M+ ++K+ P EHY C++DLL +G ++A E++N + G +W +LL AC
Sbjct: 493 FRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDG----VIWCSLLKAC 548
Query: 401 VDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVG 460
GN+ELG+ + ++++P N G +LLSN+YA G W+E+ R ++ ++G++K G
Sbjct: 549 KMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 608
Query: 461 CSWVQVTS 468
CS +++ S
Sbjct: 609 CSSIEIDS 616
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 215/469 (45%), Gaps = 70/469 (14%)
Query: 6 IQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLH---N 62
+ LH C K L +++ +H +++ G LH+ + L C+ H + L +
Sbjct: 37 LSLLHNC---KTLQSLRIIHAQMIKIG----LHNTNYALSKLIEFCILSPHFEGLPYAIS 89
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
FK + N L +N + P AL + M + + ++Y L + ++
Sbjct: 90 VFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKA 149
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA----------------ALV-- 164
G+QIH HV KLG ++V ++L+ +Y + ++DA AL+
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKG 209
Query: 165 -------------FDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTL 211
FDEIP K+ V NA++SGY E G + + LEL + M ++ D+ T+
Sbjct: 210 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 212 SAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLD 271
+ AC ++ELGRQ+H ++ H S++ + ++LI++Y KCG ++ A +F
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWI--DDHGFGSNLKIVNALIDLYSKCGELETACGLF--- 324
Query: 272 GVESRNER--SRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG 329
ER +DV+ W +++G Y YKE + LF+EML G P+ + L+++ AC
Sbjct: 325 ------ERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACA 378
Query: 330 HTGQVHAGV-------KYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLY 382
H G + G K + ++N L + L+D+ + G+++ A ++ N L+
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLR------TSLIDMYAKCGDIEAAHQVFNSILH 432
Query: 383 KGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLS 431
K + + ++G ++ D + R + + P + LLS
Sbjct: 433 KSLSSWNAMIFGFAMHGRADAS---FDLFSRMRKIGIQPDDITFVGLLS 478
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 125/405 (30%), Positives = 227/405 (56%), Gaps = 14/405 (3%)
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F M + + +NV+IS++ + +L F M + + L+ ++ ++
Sbjct: 307 LFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSS 366
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ G+Q+H S + VG++LVD+Y+K ++A L+F +P++ TV AL+SG
Sbjct: 367 LQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISG 426
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
Y + GL GL+L KM L+ DQ T + L+A +++ LG+QLH++++R+ ++E
Sbjct: 427 YVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG-NLE 485
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
+VF S L++MY KCG +K A QVF+ R+ V W +++ + NG +
Sbjct: 486 -NVFSGSGLVDMYAKCGSIKDAVQVFE-------EMPDRNAVSWNALISAHADNGDGEAA 537
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVD 362
I F +M+E G++PD ++ L V++AC H G V G +YF++MS + + P +HY+C++D
Sbjct: 538 IGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLD 597
Query: 363 LLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDP- 421
LL R G +A +L+++ ++ MW ++LNAC N L + A ++ ++
Sbjct: 598 LLGRNGRFAEAEKLMDEMPFEP----DEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKL 653
Query: 422 HNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+A + +SN+YA G W+++ ++ ++ERG++K SWV+V
Sbjct: 654 RDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEV 698
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 173/377 (45%), Gaps = 29/377 (7%)
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F+ + + + FN +I+ + + G ++ F M + + L A ++D
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
G+Q+HA G+S VG+ ++D YSK V + ++FDE+PE + V N ++S
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
Y +A + L R+M + F + L LS++++GRQLH L T D
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATAD-- 383
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
S + + +SL++MY KC + ++A+ +FK + R V WT+++ Y + G +
Sbjct: 384 SILHVGNSLVDMYAKCEMFEEAELIFK-------SLPQRTTVSWTALISGYVQKGLHGAG 436
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTG------QVHAGVKYFESMSNEFKLNPGPEH 356
+ LF +M +R D F TV+ A Q+HA + ++ N F
Sbjct: 437 LKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS------- 489
Query: 357 YSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE--LGKLAGQ 414
S LVD+ + G ++ A ++ + M + W AL++A D G+ E +G A
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEE-----MPDRNAVSWNALISAHADNGDGEAAIGAFAKM 544
Query: 415 RALELDPHNAGICILLS 431
L P + I +L+
Sbjct: 545 IESGLQPDSVSILGVLT 561
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 155/340 (45%), Gaps = 37/340 (10%)
Query: 8 FLHQCHVTKNLSAI---KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFF 64
F + NLS++ ++LH L LH + +L+ YA C + F
Sbjct: 354 FATMLSIAANLSSLQMGRQLHCQALLATADSILH-VGNSLVDMYAKC---EMFEEAELIF 409
Query: 65 KCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVN 124
K + + + +IS + +KG L F+ M +N+ D + L AS+ +
Sbjct: 410 KSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLL 469
Query: 125 FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYG 184
GKQ+HA + + G +VF GS LVD+Y+K S+KDA VF+E+P++N V NAL+S +
Sbjct: 470 LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHA 529
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESD 244
+ G + KM L+ D ++ L AC+ VE G + + + + I
Sbjct: 530 DNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCGFVEQGTE-YFQAMSPIYGITPK 588
Query: 245 VFLQSSLIEMYGKCGLVKKAQQV-----FKLDGV--------------ESRNERS----- 280
+ ++++ G+ G +A+++ F+ D + +S ER+
Sbjct: 589 KKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLF 648
Query: 281 -----RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIR 315
RD + SM +Y G++++V D+ K M E GI+
Sbjct: 649 SMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGIK 688
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 134/282 (47%), Gaps = 23/282 (8%)
Query: 128 QIHAHVGKLGWSSSVF--VGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
Q+HA KLG+ ++ F V + L+ Y ++ + A ++F+EIPEK++V N L++GY +
Sbjct: 168 QVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEK 227
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
GL+ + + L KM + FT S L+A GL LG+QLH+ L T D
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHA--LSVTTGFSRDA 285
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
+ + +++ Y K V + + +F D V + ++ Y + +Y+ +
Sbjct: 286 SVGNQILDFYSKHDRVLETRMLFD-------EMPELDFVSYNVVISSYSQADQYEASLHF 338
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK-YFESM--SNEFKLNPGPEHYSCLVD 362
F+EM G F T++S + + G + + +++ + + L+ G + LVD
Sbjct: 339 FREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVG----NSLVD 394
Query: 363 LLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG 404
+ + ++A + ++K + T W AL++ V G
Sbjct: 395 MYAKCEMFEEA-----ELIFKSLPQRTTVSWTALISGYVQKG 431
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 233 bits (594), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 146/459 (31%), Positives = 247/459 (53%), Gaps = 17/459 (3%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L C K L+ +HG +++ G L+ + ++ YATC L F+ +
Sbjct: 118 LKSCRNMKVLAYGALVHGVVVKLGMEGSLY-VDNAMMNMYATCSVTMEAACL--IFRDIK 174
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
N + + +I+ F G L + M N + Y + + AS+ ++ V GKQ
Sbjct: 175 VKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRASASIDSVTTGKQ 234
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGL 188
IHA V K G+ S++ V ++++DLY + + +A F E+ +K+ + N L+S E
Sbjct: 235 IHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISEL-ERSD 293
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
++ L + ++ + +T ++ + AC ++A+ G+QLH + R +V L
Sbjct: 294 SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFR--RGFNKNVELA 351
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
++LI+MY KCG + +Q+VF + V+ RN +V WTSM+ YG +G E ++LF +
Sbjct: 352 NALIDMYAKCGNIPDSQRVFG-EIVDRRN-----LVSWTSMMIGYGSHGYGAEAVELFDK 405
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAG 368
M+ GIRPD I F+ V+SAC H G V G+KYF M +E+ +NP + Y+C+VDLL RAG
Sbjct: 406 MVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAG 465
Query: 369 ELQKAWELLNQTLYKGMGNCTISMWGALLNAC-VDCGNIELGKLAGQRALELDPHNAGIC 427
++ +A+EL+ + +K S WGA+L AC N + +LA ++ +EL P G
Sbjct: 466 KIGEAYELVERMPFKP----DESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTY 521
Query: 428 ILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
++LS +YA G W + +R +++ G +K+ G SW+ V
Sbjct: 522 VMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWILV 560
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 165/345 (47%), Gaps = 15/345 (4%)
Query: 38 HDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSF 97
H L TNLI +Y K ++ + F M + + + +I+ + + A F
Sbjct: 45 HILATNLIVSY---FEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 98 MHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSS 157
M + + L S L + + + +G +H V KLG S++V +A++++Y+ S
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 158 VKDAA-LVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALR 216
+AA L+F +I KN V L++G+ G GL++ ++M + + + ++ A+R
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVR 221
Query: 217 ACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESR 276
A + +V G+Q+H+ V++ +S++ + +S++++Y +CG + +A+ F
Sbjct: 222 ASASIDSVTTGKQIHASVIK--RGFQSNLPVMNSILDLYCRCGYLSEAKHYF-------H 272
Query: 277 NERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHA 336
+D++ W +++ R+ E + +F+ +G P+ F ++++AC + ++
Sbjct: 273 EMEDKDLITWNTLISELERSDS-SEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNC 331
Query: 337 GVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTL 381
G + + N E + L+D+ + G + + + + +
Sbjct: 332 GQQLHGRIFRR-GFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 139/458 (30%), Positives = 245/458 (53%), Gaps = 17/458 (3%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L C + + K +H +++ G + L + +L Y C +Q F+ M+
Sbjct: 216 LKACAGLRQVKYGKAIHTHVIVRGFVTTLC-VANSLATMYTEC---GEMQDGLCLFENMS 271
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
+ + + +I + R G A+ F M + VP + S +A + ++ + +G+Q
Sbjct: 272 ERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQ 331
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGL 188
+H +V LG + S+ V ++++ +YS ++ A+++F + ++ + + ++ GY +AG
Sbjct: 332 LHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGF 391
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
+G + M K F L++ L ++ +E GRQ+H+ L +E + ++
Sbjct: 392 GEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALAL--CFGLEQNSTVR 449
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
SSLI MY KCG +K+A +F G R+ D+V T+M+ Y +GK KE IDLF++
Sbjct: 450 SSLINMYSKCGSIKEASMIF---GETDRD----DIVSLTAMINGYAEHGKSKEAIDLFEK 502
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAG 368
L+ G RPD + F++V++AC H+GQ+ G YF M + + P EHY C+VDLLCRAG
Sbjct: 503 SLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAG 562
Query: 369 ELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICI 428
L A +++N+ +K +W LL AC G+IE G+ A +R LELDP A +
Sbjct: 563 RLSDAEKMINEMSWKK----DDVVWTTLLIACKAKGDIERGRRAAERILELDPTCATALV 618
Query: 429 LLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
L+N+Y+ G +E ++R +K +G+ K+ G S +++
Sbjct: 619 TLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKI 656
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 144/288 (50%), Gaps = 20/288 (6%)
Query: 53 PKNHLQTLHN---------FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNN- 102
P +HL++L N F M + + + II + AL FS M +
Sbjct: 43 PNSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDH 102
Query: 103 -VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
V DT L L A + +++ +G+ +HA+ K SSV+VGS+L+D+Y ++ + +
Sbjct: 103 AVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 162 ALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGL 221
VF E+P +N V A+++G AG + +GL +M D +T + AL+AC GL
Sbjct: 163 CRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGL 222
Query: 222 SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR 281
V+ G+ +H++V+ + + + +SL MY +CG ++ +F+ N R
Sbjct: 223 RQVKYGKAIHTHVI--VRGFVTTLCVANSLATMYTECGEMQDGLCLFE-------NMSER 273
Query: 282 DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG 329
DVV WTS++ Y R G+ + ++ F +M + P+ F ++ SAC
Sbjct: 274 DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 232 bits (591), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/408 (33%), Positives = 222/408 (54%), Gaps = 23/408 (5%)
Query: 70 TNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVP-LDTYALCSTLTASSRVNDVNF-GK 127
T L N + + G P AL F + +D++++ + SS + G+
Sbjct: 26 TKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGR 85
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK-NTVCANALLSGYGEA 186
QIHA V KLG+++ + + ++LV YS + V A VFDE PEK N V A++S Y E
Sbjct: 86 QIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTEN 145
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
+ +EL ++M +++ D ++ AL AC L AV++G +++S ++ + D+
Sbjct: 146 ENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLT 205
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
L++SL+ MY K G +KA+++F +DV +TSM+ Y NG+ +E ++LF
Sbjct: 206 LRNSLLNMYVKSGETEKARKLFD-------ESMRKDVTTYTSMIFGYALNGQAQESLELF 258
Query: 307 KEM------LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL 360
K+M + I P+ + F+ V+ AC H+G V G ++F+SM ++ L P H+ C+
Sbjct: 259 KKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCM 318
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELD 420
VDL CR+G L+ A E +NQ K N I W LL AC GN+ELG+ +R ELD
Sbjct: 319 VDLFCRSGHLKDAHEFINQMPIK--PNTVI--WRTLLGACSLHGNVELGEEVQRRIFELD 374
Query: 421 PHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQVTS 468
+ G + LSN+YA GMWDE +R +++R + G SW+++ S
Sbjct: 375 RDHVGDYVALSNIYASKGMWDEKSKMRDRVRKRRM---PGKSWIELGS 419
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 143/449 (31%), Positives = 239/449 (53%), Gaps = 19/449 (4%)
Query: 21 IKKLHGNLLRTGTLFFLHDLHTNLI--AAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVI 78
++++H +L+ TG L T LI A A + HL F + + FN +
Sbjct: 25 LQQVHAHLIVTG-YGRSRSLLTKLITLACSARAIAYTHL-----LFLSVPLPDDFLFNSV 78
Query: 79 ISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGW 138
I + + P + + M ++NV Y S + + + ++ + GK +H H G+
Sbjct: 79 IKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGF 138
Query: 139 SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRK 198
+V +ALV YSK ++ A VFD +PEK+ V N+L+SG+ + GL + +++ +
Sbjct: 139 GLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQ 198
Query: 199 MPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC 258
M + D T + L AC AV LG +H Y++ D+ +V L ++LI +Y +C
Sbjct: 199 MRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDL--NVKLGTALINLYSRC 256
Query: 259 GLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEE-GIRPD 317
G V KA++VF D ++ N V WT+M+ YG +G ++ ++LF +M ++ G P+
Sbjct: 257 GDVGKAREVF--DKMKETN-----VAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPN 309
Query: 318 GIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELL 377
+ F+ V+SAC H G V G ++ M+ ++L PG EH+ C+VD+L RAG L +A++ +
Sbjct: 310 NVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFI 369
Query: 378 NQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARF 437
+Q G ++W A+L AC N +LG +R + L+P N G ++LSN+YA
Sbjct: 370 HQLDATGKATAP-ALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALS 428
Query: 438 GMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
G DE+ H+R + LRK VG S ++V
Sbjct: 429 GKTDEVSHIRDGMMRNNLRKQVGYSVIEV 457
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 231 bits (589), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 141/489 (28%), Positives = 242/489 (49%), Gaps = 52/489 (10%)
Query: 11 QCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNST 70
QC + L K++H +L++TG + D T C + + + F +N
Sbjct: 34 QCSTMREL---KQIHASLIKTG---LISDTVTASRVLAFCCASPSDMNYAYLVFTRINHK 87
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFM--HTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
NP +N II F R FP +A++ F M + +V S A R+ G+Q
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQ 147
Query: 129 IHAHVGKLGWSSSVFVGSALVDLY-------------------------------SKLSS 157
+H V K G F+ + ++ +Y +K
Sbjct: 148 LHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGL 207
Query: 158 VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRA 217
+ A +FDE+P++N V N+++SG+ G + L++ R+M +K D FT+ + L A
Sbjct: 208 IDQAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA 267
Query: 218 CTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRN 277
C L A E GR +H Y++R ++ S V ++LI+MY KCG +++ VF+
Sbjct: 268 CAYLGASEQGRWIHEYIVRNRFELNSIVV--TALIDMYCKCGCIEEGLNVFEC------- 318
Query: 278 ERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
+ + W SM+ NG + +DLF E+ G+ PD ++F+ V++AC H+G+VH
Sbjct: 319 APKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 338 VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
++F M ++ + P +HY+ +V++L AG L++A L+ + +W +LL
Sbjct: 379 DEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEE----DTVIWSSLL 434
Query: 398 NACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRK 457
+AC GN+E+ K A + +LDP +LLSN YA +G+++E R+++KER + K
Sbjct: 435 SACRKIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEK 494
Query: 458 DVGCSWVQV 466
+VGCS ++V
Sbjct: 495 EVGCSSIEV 503
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 135/407 (33%), Positives = 223/407 (54%), Gaps = 25/407 (6%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNN--VPLDTYALCSTLTASSRVN 121
F M + + + ++S F + AL F MH VP D + LTA +
Sbjct: 221 FDEMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVP-DGSTFGTVLTACGNLR 279
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
+ GK+IH + G S+V V S+L+D+Y K SV++A VF+ + +KN+V +ALL
Sbjct: 280 RLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLG 339
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
GY + G + +E+ R+M + D + L+AC GL+AV LG+++H +R
Sbjct: 340 GYCQNGEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVR--RGC 393
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
+V ++S+LI++YGK G + A +V+ + R+++ W +ML +NG+ +E
Sbjct: 394 FGNVIVESALIDLYGKSGCIDSASRVYSKMSI-------RNMITWNAMLSALAQNGRGEE 446
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
+ F +M+++GI+PD I+F+ +++ACGHTG V G YF M+ + + PG EHYSC++
Sbjct: 447 AVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMI 506
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLA---GQRALE 418
DLL RAG ++A LL + + S+WG LL C N + ++A +R +E
Sbjct: 507 DLLGRAGLFEEAENLLERAECRN----DASLWGVLLGPCA--ANADASRVAERIAKRMME 560
Query: 419 LDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
L+P +LLSN+Y G + ++R ++ RG+ K VG SW+
Sbjct: 561 LEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 116/423 (27%), Positives = 200/423 (47%), Gaps = 44/423 (10%)
Query: 6 IQFLHQCHVTKNLSAIKKLHGNLLRT---------GTLFFLH----------DLHTNLIA 46
I+ L+ H + + A KL+ +LL+T G F H ++ +L++
Sbjct: 46 IRILNSTH-SSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLS 104
Query: 47 AYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLD 106
Y P ++ F + + + ++S + AL F M + + +
Sbjct: 105 LYFKLGPG--MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDAN 162
Query: 107 TYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFD 166
+ L S + A S + +V G+ H V G+ + F+ S L LY DA VFD
Sbjct: 163 EFTLSSAVKACSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFD 222
Query: 167 EIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR-LKYDQFTLSAALRACTGLSAVE 225
E+PE + +C A+LS + + L+ + L L M + L D T L AC L ++
Sbjct: 223 EMPEPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLK 282
Query: 226 LGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVL 285
G+++H ++ T+ I S+V ++SSL++MYGKCG V++A+QVF +G+ +N V
Sbjct: 283 QGKEIHGKLI--TNGIGSNVVVESSLLDMYGKCGSVREARQVF--NGMSKKNS-----VS 333
Query: 286 WTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK-YFESM 344
W+++LG Y +NG++++ I++F+EM E+ D F TV+ AC V G + + + +
Sbjct: 334 WSALLGGYCQNGEHEKAIEIFREMEEK----DLYCFGTVLKACAGLAAVRLGKEIHGQYV 389
Query: 345 SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG 404
N E S L+DL ++G + A +Y M + W A+L+A G
Sbjct: 390 RRGCFGNVIVE--SALIDLYGKSGCIDSA-----SRVYSKMSIRNMITWNAMLSALAQNG 442
Query: 405 NIE 407
E
Sbjct: 443 RGE 445
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 169/344 (49%), Gaps = 20/344 (5%)
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
++S+ P + I+ C+ G A+ + H++ +P S L ++V G
Sbjct: 22 ISSSAPTKQSRIL-ELCKLGQLTEAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHG 80
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLS-SVKDAALVFDEIPEKNTVCANALLSGYGE 185
Q HAHV K G + VG++L+ LY KL +++ VFD K+ + +++SGY
Sbjct: 81 IQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVT 140
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
+ LE+ +M L ++FTLS+A++AC+ L V LGR H V+ TH E +
Sbjct: 141 GKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVI--THGFEWNH 198
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
F+ S+L +YG A++VF DV+ WT++L + +N Y+E + L
Sbjct: 199 FISSTLAYLYGVNREPVDARRVFD-------EMPEPDVICWTAVLSAFSKNDLYEEALGL 251
Query: 306 FKEMLE-EGIRPDGIAFLTVISACGHTGQVHAGVK-YFESMSNEFKLNPGPEHYSCLVDL 363
F M +G+ PDG F TV++ACG+ ++ G + + + ++N N E S L+D+
Sbjct: 252 FYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVE--SSLLDM 309
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
+ G +++A ++ N GM W ALL G E
Sbjct: 310 YGKCGSVREARQVFN-----GMSKKNSVSWSALLGGYCQNGEHE 348
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 221/395 (55%), Gaps = 17/395 (4%)
Query: 75 FNVIISNFCRKGFPFLALTAF-SFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHV 133
+N ISN G P A+ AF F + P ++ C+ L A S +N G Q+H V
Sbjct: 177 WNAFISNSVTDGRPREAIEAFIEFRRIDGHP-NSITFCAFLNACSDWLHLNLGMQLHGLV 235
Query: 134 GKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGL 193
+ G+ + V V + L+D Y K ++ + ++F E+ KN V +L++ Y + +
Sbjct: 236 LRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKAS 295
Query: 194 ELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIE 253
L + ++ F +S+ L AC G++ +ELGR +H++ ++ +E +F+ S+L++
Sbjct: 296 VLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC--VERTIFVGSALVD 353
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
MYGKCG ++ ++Q F D + +N +R+ S++G Y G+ + LF+EM G
Sbjct: 354 MYGKCGCIEDSEQAF--DEMPEKNLVTRN-----SLIGGYAHQGQVDMALALFEEMAPRG 406
Query: 314 I--RPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQ 371
P+ + F++++SAC G V G+K F+SM + + + PG EHYSC+VD+L RAG ++
Sbjct: 407 CGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVE 466
Query: 372 KAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLS 431
+A+E + + + TIS+WGAL NAC G +LG LA + +LDP ++G +LLS
Sbjct: 467 RAYEFIKKMPIQP----TISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLS 522
Query: 432 NLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
N +A G W E +R +K G++K G SW+ V
Sbjct: 523 NTFAAAGRWAEANTVREELKGVGIKKGAGYSWITV 557
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 129/266 (48%), Gaps = 11/266 (4%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHT--NLIAAYATCLPKNHLQTLHNFFK 65
FL+ C +L+ +LHG +LR+G F D+ LI Y C +++ F
Sbjct: 215 FLNACSDWLHLNLGMQLHGLVLRSG---FDTDVSVCNGLIDFYGKC---KQIRSSEIIFT 268
Query: 66 CMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNF 125
M + N + + +++ + + A + + V + + S L+A + + +
Sbjct: 269 EMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLEL 328
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
G+ IHAH K ++FVGSALVD+Y K ++D+ FDE+PEKN V N+L+ GY
Sbjct: 329 GRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAH 388
Query: 186 AGLWAQGLELVRKMPVLRL--KYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
G L L +M + T + L AC+ AVE G ++ +R+T+ IE
Sbjct: 389 QGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDS-MRSTYGIEP 447
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFK 269
S +++M G+ G+V++A + K
Sbjct: 448 GAEHYSCIVDMLGRAGMVERAYEFIK 473
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 9/283 (3%)
Query: 55 NHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTL 114
+H ++ + + N + + +IS + G AL F M V + +
Sbjct: 56 DHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAF 115
Query: 115 TASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTV 174
A + + GKQIHA K G VFVG + D+Y K DA +FDEIPE+N
Sbjct: 116 KAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLE 175
Query: 175 CANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYV 234
NA +S G + +E + + + T A L AC+ + LG QLH V
Sbjct: 176 TWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLV 235
Query: 235 LRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYG 294
LR+ D +DV + + LI+ YGKC ++ ++ +F G +++ V W S++ Y
Sbjct: 236 LRSGFD--TDVSVCNGLIDFYGKCKQIRSSEIIFTEMG-------TKNAVSWCSLVAAYV 286
Query: 295 RNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
+N + ++ L+ ++ + +V+SAC + G
Sbjct: 287 QNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELG 329
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 104/220 (47%), Gaps = 14/220 (6%)
Query: 110 LCSTLTASSRVNDVNFGKQIHAHVGK-LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEI 168
L + ++ASS + G+ +HA + K L F+ + L+++YSKL + A LV
Sbjct: 13 LKNAISASS----MRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLT 68
Query: 169 PEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGR 228
P +N V +L+SG + G ++ L +M + + FT A +A L G+
Sbjct: 69 PARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGK 128
Query: 229 QLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTS 288
Q+H+ ++ + DVF+ S +MY K L A+++F D + RN + W +
Sbjct: 129 QIHALAVKCGRIL--DVFVGCSAFDMYCKTRLRDDARKLF--DEIPERNLET-----WNA 179
Query: 289 MLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC 328
+ +G+ +E I+ F E P+ I F ++AC
Sbjct: 180 FISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNAC 219
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 229 bits (585), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 125/412 (30%), Positives = 226/412 (54%), Gaps = 16/412 (3%)
Query: 57 LQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMH--TNNVPLDTYALCSTL 114
L+ F M + + +++ + +K P AL +S M N+ P + + + +
Sbjct: 167 LEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRP-NIFTVSIAV 225
Query: 115 TASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTV 174
A++ V + GK+IH H+ + G S + S+L+D+Y K + +A +FD+I EK+ V
Sbjct: 226 AAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVV 285
Query: 175 CANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYV 234
+++ Y ++ W +G L ++ + +++T + L AC L+ ELG+Q+H Y+
Sbjct: 286 SWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYM 345
Query: 235 LRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYG 294
R D S F SSL++MY KCG ++ A+ V +DG D+V WTS++G
Sbjct: 346 TRVGFDPYS--FASSSLVDMYTKCGNIESAKHV--VDGCPKP-----DLVSWTSLIGGCA 396
Query: 295 RNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGP 354
+NG+ E + F +L+ G +PD + F+ V+SAC H G V G+++F S++ + +L+
Sbjct: 397 QNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTS 456
Query: 355 EHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQ 414
+HY+CLVDLL R+G ++ ++++ K + +W ++L C GNI+L + A Q
Sbjct: 457 DHYTCLVDLLARSGRFEQLKSVISEMPMKP----SKFLWASVLGGCSTYGNIDLAEEAAQ 512
Query: 415 RALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+++P N + ++N+YA G W+E G +R ++E G+ K G SW ++
Sbjct: 513 ELFKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEI 564
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 174/400 (43%), Gaps = 65/400 (16%)
Query: 54 KNHLQTLHNFFKCMNST---NPLHFN--VIISNFCRK-----------GFPFLALTAFSF 97
K +L + H K + NP H + V++ CR G L
Sbjct: 18 KRNLSSFHASLKRFSDKKFFNPNHEDGGVVVERLCRANRFGEAIDVLCGQKLLREAVQLL 77
Query: 98 MHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSS 157
P TY C+ + S+ + GK++H H+ G+ + + + L+ +Y+K S
Sbjct: 78 GRAKKPPASTY--CNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGS 135
Query: 158 VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMP-----------VLRLKY 206
+ DA VFDE+P ++ N +++GY E GL + +L +M +K
Sbjct: 136 LVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKK 195
Query: 207 DQ---------------------FTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
DQ FT+S A+ A + + G+++H +++R ++SD
Sbjct: 196 DQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRA--GLDSDE 253
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
L SSL++MYGKCG + +A+ +F D + +DVV WTSM+ Y ++ +++E L
Sbjct: 254 VLWSSLMDMYGKCGCIDEARNIF--DKI-----VEKDVVSWTSMIDRYFKSSRWREGFSL 306
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLC 365
F E++ RP+ F V++AC G + M+ +P S LVD+
Sbjct: 307 FSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR-VGFDPYSFASSSLVDMYT 365
Query: 366 RAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGN 405
+ G ++ A +++ G + W +L+ C G
Sbjct: 366 KCGNIESAKHVVD-----GCPKPDLVSWTSLIGGCAQNGQ 400
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 229 bits (584), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 241/477 (50%), Gaps = 45/477 (9%)
Query: 21 IKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIIS 80
+K++H +L+TG + + + T ++ + + L F + + +N++I
Sbjct: 30 LKQIHARMLKTGLMQDSYAI-TKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFLWNLMIR 88
Query: 81 NFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSS 140
F P +L + M ++ P + Y S L A S ++ QIHA + KLG+ +
Sbjct: 89 GFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLGYEN 148
Query: 141 SVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMP 200
V+ ++L++ Y+ + K A L+FD IPE + V N+++ GY +AG L L RKM
Sbjct: 149 DVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMA 208
Query: 201 ----------------------VLRL---------KYDQFTLSAALRACTGLSAVELGRQ 229
L+L + D +L+ AL AC L A+E G+
Sbjct: 209 EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKW 268
Query: 230 LHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSM 289
+HSY+ +T I D L LI+MY KCG +++A +VFK N + + V WT++
Sbjct: 269 IHSYLNKTR--IRMDSVLGCVLIDMYAKCGEMEEALEVFK-------NIKKKSVQAWTAL 319
Query: 290 LGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFK 349
+ Y +G +E I F EM + GI+P+ I F V++AC +TG V G F SM ++
Sbjct: 320 ISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYN 379
Query: 350 LNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELG 409
L P EHY C+VDLL RAG L +A + + K N I WGALL AC NIELG
Sbjct: 380 LKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLK--PNAVI--WGALLKACRIHKNIELG 435
Query: 410 KLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+ G+ + +DP++ G + +N++A WD+ R ++KE+G+ K GCS + +
Sbjct: 436 EEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISL 492
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 228 bits (582), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 142/450 (31%), Positives = 238/450 (52%), Gaps = 24/450 (5%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTN--LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVII 79
K++H ++ G F D + N L+ Y C + L+ F+ M + + +N +I
Sbjct: 228 KEIHRKCVKKG---FELDEYVNSALVDMYGKC---DCLEVAREVFQKMPRKSLVAWNSMI 281
Query: 80 SNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWS 139
+ KG + + M L S L A SR ++ GK IH +V + +
Sbjct: 282 KGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVN 341
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
+ ++V +L+DLY K A VF + + N ++S Y G W + +E+ +M
Sbjct: 342 ADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQM 401
Query: 200 PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG 259
+ +K D T ++ L AC+ L+A+E G+Q+H + + +E+D L S+L++MY KCG
Sbjct: 402 VSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSI--SESRLETDELLLSALLDMYSKCG 459
Query: 260 LVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGI 319
K+A ++F + +DVV WT M+ YG +G+ +E + F EM + G++PDG+
Sbjct: 460 NEKEAFRIFN-------SIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGV 512
Query: 320 AFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQ 379
L V+SACGH G + G+K+F M +++ + P EHYSC++D+L RAG L +A+E++ Q
Sbjct: 513 TLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQ 572
Query: 380 TLYKGMGNCTISMWGALLNACVDCGNIE--LGKLAGQRALELDPHNAGICILLSNLYARF 437
T + + L +AC C ++E LG + +E P +A ++L NLYA
Sbjct: 573 T---PETSDNAELLSTLFSAC--CLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASG 627
Query: 438 GMWDEIGHLRVVIKERGLRKDVGCSWVQVT 467
WD +R+ +KE GLRK GCSW++++
Sbjct: 628 ESWDAARRVRLKMKEMGLRKKPGCSWIEMS 657
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 183/358 (51%), Gaps = 19/358 (5%)
Query: 42 TNLIAAYATC-LPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHT 100
++L+ YA L +N LQ F M + +N +IS F + G AL F M +
Sbjct: 146 SSLVGMYAKFNLFENSLQV----FDEMPERDVASWNTVISCFYQSGEAEKALELFGRMES 201
Query: 101 NNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKD 160
+ ++ +L ++A SR+ + GK+IH K G+ +V SALVD+Y K ++
Sbjct: 202 SGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEV 261
Query: 161 AALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTG 220
A VF ++P K+ V N+++ GY G +E++ +M + + Q TL++ L AC+
Sbjct: 262 AREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSR 321
Query: 221 LSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS 280
+ G+ +H YV+R+ + +D+++ SLI++Y KCG A+ VF ++
Sbjct: 322 SRNLLHGKFIHGYVIRSV--VNADIYVNCSLIDLYFKCGEANLAETVF--------SKTQ 371
Query: 281 RDVV-LWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK 339
+DV W M+ Y G + + ++++ +M+ G++PD + F +V+ AC + G +
Sbjct: 372 KDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQ 431
Query: 340 YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCT--ISMWGA 395
S+S E +L S L+D+ + G ++A+ + N K + + T IS +G+
Sbjct: 432 IHLSIS-ESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGS 488
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 194/408 (47%), Gaps = 24/408 (5%)
Query: 2 SNSIIQFLHQC-HVTKNLSAIKKLHGNLLRTGTLFFLHD--LHTNLIAAYATCLPKNHLQ 58
S+ ++ L +C + TK+L IK +H +L TL D L +LI Y TC K+H
Sbjct: 3 SSKLLSLLRECTNSTKSLRRIKLVHQRIL---TLGLRRDVVLCKSLINVYFTC--KDHCS 57
Query: 59 TLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPL-DTYALCSTLTAS 117
H F ++ +N ++S + + L F + ++ + D++ + + A
Sbjct: 58 ARHVFENFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAY 117
Query: 118 SRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCAN 177
+ G+ IH V K G+ V V S+LV +Y+K + +++ VFDE+PE++ N
Sbjct: 118 GALGREFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWN 177
Query: 178 ALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRT 237
++S + ++G + LEL +M + + +L+ A+ AC+ L +E G+++H ++
Sbjct: 178 TVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKK 237
Query: 238 THDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNG 297
++ D ++ S+L++MYGKC ++ A++VF+ + +V W SM+ Y G
Sbjct: 238 GFEL--DEYVNSALVDMYGKCDCLEVAREVFQ-------KMPRKSLVAWNSMIKGYVAKG 288
Query: 298 KYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY 357
K +++ M+ EG RP +++ AC + + G K+ +N
Sbjct: 289 DSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHG-KFIHGYVIRSVVNADIYVN 347
Query: 358 SCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGN 405
L+DL + GE L +T++ W ++++ + GN
Sbjct: 348 CSLIDLYFKCGEAN-----LAETVFSKTQKDVAESWNVMISSYISVGN 390
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 149/452 (32%), Positives = 235/452 (51%), Gaps = 28/452 (6%)
Query: 31 TGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNS-------TNPLHFNVIISNFC 83
T +LF +H LH N A HL L+ F +S N ++ +I
Sbjct: 30 THSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICS 89
Query: 84 RKGFPFLALTAFSFM---HTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG-WS 139
R P L L F M ++ + A + + GKQIH V K G +
Sbjct: 90 RSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFL 149
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
S V + ++ +Y + + DA VFDEIP+ + V + L++GY GL ++GLE+ R+M
Sbjct: 150 SDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREM 209
Query: 200 PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG 259
V L+ D+F+++ AL AC + A+ G+ +H +V + + IESDVF+ ++L++MY KCG
Sbjct: 210 LVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSW-IESDVFVGTALVDMYAKCG 268
Query: 260 LVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM-LEEGIRPDG 318
++ A +VFK R+V W +++G Y G K+ + + + E+GI+PD
Sbjct: 269 CIETAVEVFK-------KLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDS 321
Query: 319 IAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLN 378
+ L V++AC H G + G E+M +++ P EHYSC+VDL+CRAG L A L+
Sbjct: 322 VVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIE 381
Query: 379 QTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNA----GICILLSNLY 434
+ K + S+WGALLN C N+ELG+LA + L+L+ N + LSN+Y
Sbjct: 382 KMPMKPLA----SVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIY 437
Query: 435 ARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
E +R +I++RG+RK G S ++V
Sbjct: 438 FSVQRNPEASKVRGMIEQRGVRKTPGWSVLEV 469
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 228 bits (581), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 137/428 (32%), Positives = 227/428 (53%), Gaps = 23/428 (5%)
Query: 42 TNLIAAYAT--CLPKNH-LQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFM 98
T LI AY+ C+ + L HNF + + +N +++ + + L F+ M
Sbjct: 456 TALIDAYSRNRCMKEAEILFERHNF-------DLVAWNAMMAGYTQSHDGHKTLKLFALM 508
Query: 99 HTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSV 158
H D + L + + +N GKQ+HA+ K G+ ++V S ++D+Y K +
Sbjct: 509 HKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDM 568
Query: 159 KDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRAC 218
A FD IP + V ++SG E G + + +M ++ + D+FT++ +A
Sbjct: 569 SAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKAS 628
Query: 219 TGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNE 278
+ L+A+E GRQ+H+ L+ + +D F+ +SL++MY KCG + A +FK +E N
Sbjct: 629 SCLTALEQGRQIHANALKL--NCTNDPFVGTSLVDMYAKCGSIDDAYCLFK--RIEMMN- 683
Query: 279 RSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGV 338
+ W +ML ++G+ KE + LFK+M GI+PD + F+ V+SAC H+G V
Sbjct: 684 ----ITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAY 739
Query: 339 KYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLN 398
K+ SM ++ + P EHYSCL D L RAG +++A L+ + + SM+ LL
Sbjct: 740 KHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEA----SASMYRTLLA 795
Query: 399 ACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKD 458
AC G+ E GK + LEL+P ++ +LLSN+YA WDE+ R ++K ++KD
Sbjct: 796 ACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKD 855
Query: 459 VGCSWVQV 466
G SW++V
Sbjct: 856 PGFSWIEV 863
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 161/331 (48%), Gaps = 19/331 (5%)
Query: 79 ISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGW 138
+S + G L F+ M ++V D L + +V+ + G+Q+H KLG
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 139 SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRK 198
+ V ++L+++Y KL A VFD + E++ + N++++G + GL + + L +
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 199 MPVLRLKYDQFTLSAALRACTGL-SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGK 257
+ LK DQ+T+++ L+A + L + L +Q+H + ++ + SD F+ ++LI+ Y +
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINN--VSDSFVSTALIDAYSR 464
Query: 258 CGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPD 317
+K+A+ +F+ + D+V W +M+ Y ++ + + LF M ++G R D
Sbjct: 465 NRCMKEAEILFE--------RHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSD 516
Query: 318 GIAFLTVISACGHTGQVHAGVK-YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWEL 376
TV CG ++ G + + ++ + + L+ S ++D+ + G++ A
Sbjct: 517 DFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVS--SGILDMYVKCGDMSAA--- 571
Query: 377 LNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
Q + + W +++ C++ G E
Sbjct: 572 --QFAFDSIPVPDDVAWTTMISGCIENGEEE 600
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 100/224 (44%), Gaps = 17/224 (7%)
Query: 121 NDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALL 180
+D+ GK HA + + F+ + L+ +YSK S+ A VFD++P+++ V N++L
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 181 SGYGEAGLWA-----QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVL 235
+ Y ++ Q L R + + + TLS L+ C V H Y
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYAC 172
Query: 236 RTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGR 295
+ ++ D F+ +L+ +Y K G VK+ + +F+ RDVVLW ML Y
Sbjct: 173 KI--GLDGDEFVAGALVNIYLKFGKVKEGKVLFE-------EMPYRDVVLWNLMLKAYLE 223
Query: 296 NGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG---HTGQVHA 336
G +E IDL G+ P+ I + G GQV +
Sbjct: 224 MGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKS 267
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 16/179 (8%)
Query: 177 NALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLR 236
N LS Y +G ++ L+ M ++ DQ T L + ++ LG+Q+H L+
Sbjct: 284 NKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALK 343
Query: 237 TTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRN 296
D+ V +SLI MY K A+ VF N RD++ W S++ +N
Sbjct: 344 LGLDLMLTV--SNSLINMYCKLRKFGFARTVFD-------NMSERDLISWNSVIAGIAQN 394
Query: 297 GKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGH-------TGQVHAGVKYFESMSNEF 348
G E + LF ++L G++PD +V+ A + QVH ++S+ F
Sbjct: 395 GLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 8/161 (4%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFL-----ALTA 94
L NLI+ Y+ C L F M + + +N I++ + + + A
Sbjct: 76 LINNLISMYSKC---GSLTYARRVFDKMPDRDLVSWNSILAAYAQSSECVVENIQQAFLL 132
Query: 95 FSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSK 154
F + + V L L V + H + K+G FV ALV++Y K
Sbjct: 133 FRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLK 192
Query: 155 LSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLEL 195
VK+ ++F+E+P ++ V N +L Y E G + ++L
Sbjct: 193 FGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDL 233
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 208/419 (49%), Gaps = 47/419 (11%)
Query: 79 ISNFCRKGFPFLALTAFSFMHTN-NVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG 137
+S++ +G AL F MH++ +PLD + L + + G +HAH K
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 138 WSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELV- 196
+ S+ FVG AL+D+Y K SV A +FDEIP++N V NA++S Y G + +EL
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 197 --------------------------------RKMPVLRLKYDQFTLSAALRACTGLSAV 224
RKM R K + TL A + AC+ + A
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 225 ELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVV 284
L +++HSY R IE L+S L+E YG+CG + Q VF D +E R DVV
Sbjct: 199 RLIKEIHSYAFRNL--IEPHPQLKSGLVEAYGRCGSIVYVQLVF--DSMEDR-----DVV 249
Query: 285 LWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
W+S++ Y +G + + F+EM + PD IAFL V+ AC H G + YF+ M
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKRM 309
Query: 345 SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG 404
++ L +HYSCLVD+L R G ++A++++ K T WGALL AC + G
Sbjct: 310 QGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKP----TAKTWGALLGACRNYG 365
Query: 405 NIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSW 463
IEL ++A + L ++P N +LL +Y G +E LR+ +KE G++ G SW
Sbjct: 366 EIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 228 bits (580), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 244/460 (53%), Gaps = 17/460 (3%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCM 67
L +CH N+ K++H ++ + ++++A A +N + + F+ +
Sbjct: 36 LLKRCH---NIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGI 92
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGK 127
+ FN +I + AL ++ M D + L A +R+ + GK
Sbjct: 93 DDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGK 152
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
QIH V KLG + VFV ++L+++Y + ++ ++ VF+++ K ++++S G
Sbjct: 153 QIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMG 212
Query: 188 LWAQGLELVRKM-PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
+W++ L L R M LK ++ + +AL AC A+ LG +H ++LR ++ ++
Sbjct: 213 MWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISEL--NII 270
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
+Q+SL++MY KCG + KA +F+ +E RN + +++M+ +G+ + + +F
Sbjct: 271 VQTSLVDMYVKCGCLDKALHIFQ--KMEKRNN-----LTYSAMISGLALHGEGESALRMF 323
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
+M++EG+ PD + +++V++AC H+G V G + F M E K+ P EHY CLVDLL R
Sbjct: 324 SKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Query: 367 AGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGI 426
AG L++A E + + +W L+ C NIELG++A Q L+L HN G
Sbjct: 384 AGLLEEALETIQSIPIEK----NDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGD 439
Query: 427 CILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+L+SNLY++ MWD++ R I +GL++ G S V++
Sbjct: 440 YLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFSIVEL 479
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/474 (28%), Positives = 253/474 (53%), Gaps = 27/474 (5%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNF 63
+I L C + L K+LH L+ G+L + + L+ Y C + +
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC---KQVLSGRRV 360
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPL-DTYALCSTLTASSRVND 122
F M +N +I+ + + AL F M + L ++ + + A R
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGA 420
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ + IH V K G FV + L+D+YS+L + A +F ++ +++ V N +++G
Sbjct: 421 FSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITG 480
Query: 183 YGEAGLWAQGLELVRKMPVLR-----------LKYDQFTLSAALRACTGLSAVELGRQLH 231
Y + L L+ KM L LK + TL L +C LSA+ G+++H
Sbjct: 481 YVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIH 540
Query: 232 SYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
+Y ++ +++ +DV + S+L++MY KCG ++ +++VF D + +N V+ W ++
Sbjct: 541 AYAIK--NNLATDVAVGSALVDMYAKCGCLQMSRKVF--DQIPQKN-----VITWNVIIM 591
Query: 292 VYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLN 351
YG +G +E IDL + M+ +G++P+ + F++V +AC H+G V G++ F M ++ +
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651
Query: 352 PGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKL 411
P +HY+C+VDLL RAG +++A++L+N + + W +LL A N+E+G++
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNM-MPRDFNKA--GAWSSLLGASRIHNNLEIGEI 708
Query: 412 AGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
A Q ++L+P+ A +LL+N+Y+ G+WD+ +R +KE+G+RK+ GCSW++
Sbjct: 709 AAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 144/296 (48%), Gaps = 19/296 (6%)
Query: 106 DTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWS-SSVFVGSALVDLYSKLSSVKDAALV 164
D YA + L A + + D+ GKQIHAHV K G+ SV V + LV+LY K V
Sbjct: 96 DNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKV 155
Query: 165 FDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAV 224
FD I E+N V N+L+S W LE R M ++ FTL + + AC+ L
Sbjct: 156 FDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMP 215
Query: 225 E---LGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR 281
E +G+Q+H+Y LR E + F+ ++L+ MYGK G + ++ + G R
Sbjct: 216 EGLMMGKQVHAYGLRKG---ELNSFIINTLVAMYGKLGKLASSKVLLGSFG-------GR 265
Query: 282 DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYF 341
D+V W ++L +N + E ++ +EM+ EG+ PD +V+ AC H + G +
Sbjct: 266 DLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELH 325
Query: 342 ESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
L+ S LVD+ C ++ L + ++ GM + I +W A++
Sbjct: 326 AYALKNGSLDENSFVGSALVDMYCNCKQV-----LSGRRVFDGMFDRKIGLWNAMI 376
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 156/315 (49%), Gaps = 16/315 (5%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
K++H ++ + G + L+ Y C ++ F ++ N + +N +IS+
Sbjct: 117 KQIHAHVYKFGYGVDSVTVANTLVNLYRKC---GDFGAVYKVFDRISERNQVSWNSLISS 173
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV---NDVNFGKQIHAHVGKLGW 138
C +AL AF M NV ++ L S +TA S + + GKQ+HA+ + G
Sbjct: 174 LCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE 233
Query: 139 SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRK 198
+S F+ + LV +Y KL + + ++ ++ V N +LS + + LE +R+
Sbjct: 234 LNS-FIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 292
Query: 199 MPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC 258
M + ++ D+FT+S+ L AC+ L + G++LH+Y L+ ++ + F+ S+L++MY C
Sbjct: 293 MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG-SLDENSFVGSALVDMYCNC 351
Query: 259 GLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEE-GIRPD 317
V ++VF DG+ R + LW +M+ Y +N KE + LF M E G+ +
Sbjct: 352 KQVLSGRRVF--DGMFDRK-----IGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLAN 404
Query: 318 GIAFLTVISACGHTG 332
V+ AC +G
Sbjct: 405 STTMAGVVPACVRSG 419
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 73/132 (55%), Gaps = 8/132 (6%)
Query: 199 MPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC 258
M VL +K D + A L+A L +ELG+Q+H++V + + ++S V + ++L+ +Y KC
Sbjct: 88 MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDS-VTVANTLVNLYRKC 146
Query: 259 GLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDG 318
G +VF D + RN+ V W S++ K++ ++ F+ ML+E + P
Sbjct: 147 GDFGAVYKVF--DRISERNQ-----VSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSS 199
Query: 319 IAFLTVISACGH 330
++V++AC +
Sbjct: 200 FTLVSVVTACSN 211
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/470 (29%), Positives = 247/470 (52%), Gaps = 25/470 (5%)
Query: 2 SNSIIQFLHQCHVTKNLSAIKKLHGNLLRTG--TLFFLHDLHTNLIAAYATCLPKNHLQT 59
S +++ L C + + +H ++ G + F+ + +L A + L+
Sbjct: 247 SVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFG------RLRD 300
Query: 60 LHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSR 119
F M + + +N II + P A++ F M + + D L S + S+
Sbjct: 301 CQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQ 360
Query: 120 VNDVNFGKQIHAHVGKLGWS-SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANA 178
+ D+ + + + GW + +G+A+V +Y+KL V A VF+ +P + + N
Sbjct: 361 LGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNT 420
Query: 179 LLSGYGEAGLWAQGLELVRKMPVL-RLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRT 237
++SGY + G ++ +E+ M + +Q T + L AC+ A+ G +LH +L+
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK- 479
Query: 238 THDIESDVFLQSSLIEMYGKCGLVKKAQQVF-KLDGVESRNERSRDVVLWTSMLGVYGRN 296
+ + DVF+ +SL +MYGKCG ++ A +F ++ V S V W +++ +G +
Sbjct: 480 -NGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS--------VPWNTLIACHGFH 530
Query: 297 GKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEH 356
G ++ + LFKEML+EG++PD I F+T++SAC H+G V G FE M ++ + P +H
Sbjct: 531 GHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKH 590
Query: 357 YSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRA 416
Y C+VD+ RAG+L+ A + + + S+WGALL+AC GN++LGK+A +
Sbjct: 591 YGCMVDMYGRAGQLETALKFIKSMSLQP----DASIWGALLSACRVHGNVDLGKIASEHL 646
Query: 417 LELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
E++P + G +LLSN+YA G W+ + +R + +GLRK G S ++V
Sbjct: 647 FEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEV 696
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 157/321 (48%), Gaps = 21/321 (6%)
Query: 17 NLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFN 76
NL + K LH L+ + + + + L+ Y C N H F N + +N
Sbjct: 66 NLQSAKCLHARLVVSKQIQNVC-ISAKLVNLY--CYLGNVALARHTFDHIQNR-DVYAWN 121
Query: 77 VIISNFCRKGFPFLALTAFS-FMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
++IS + R G + FS FM ++ + D S L A V D G +IH K
Sbjct: 122 LMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVID---GNKIHCLALK 178
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLEL 195
G+ V+V ++L+ LYS+ +V +A ++FDE+P ++ NA++SGY ++G + L L
Sbjct: 179 FGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTL 238
Query: 196 VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
+ + D T+ + L ACT G +HSY ++ H +ES++F+ + LI++Y
Sbjct: 239 SNGLRAM----DSVTVVSLLSACTEAGDFNRGVTIHSYSIK--HGLESELFVSNKLIDLY 292
Query: 256 GKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIR 315
+ G ++ Q+VF V RD++ W S++ Y N + I LF+EM I+
Sbjct: 293 AEFGRLRDCQKVFDRMYV-------RDLISWNSIIKAYELNEQPLRAISLFQEMRLSRIQ 345
Query: 316 PDGIAFLTVISACGHTGQVHA 336
PD + +++ S G + A
Sbjct: 346 PDCLTLISLASILSQLGDIRA 366
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 151/307 (49%), Gaps = 16/307 (5%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N +IS +C+ G ALT + + +D+ + S L+A + D N G IH++
Sbjct: 219 WNAMISGYCQSGNAKEALTLSNGLRA----MDSVTVVSLLSACTEAGDFNRGVTIHSYSI 274
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
K G S +FV + L+DLY++ ++D VFD + ++ + N+++ Y + +
Sbjct: 275 KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 334
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
L ++M + R++ D TL + + L + R + + LR +E D+ + ++++ M
Sbjct: 335 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLE-DITIGNAVVVM 393
Query: 255 YGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG- 313
Y K GLV A+ VF + DV+ W +++ Y +NG E I+++ M EEG
Sbjct: 394 YAKLGLVDSARAVFNW-------LPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGE 446
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVK-YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQK 372
I + +++V+ AC G + G+K + + N L+ + L D+ + G L+
Sbjct: 447 IAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFV--VTSLADMYGKCGRLED 504
Query: 373 AWELLNQ 379
A L Q
Sbjct: 505 ALSLFYQ 511
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 146/453 (32%), Positives = 227/453 (50%), Gaps = 48/453 (10%)
Query: 44 LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNV 103
LI+ YA C N + L F ++ + +N +IS + AL F+ M N
Sbjct: 259 LISGYANCGRVNESRGL---FDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NET 314
Query: 104 PLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSS------ 157
D+ L + + A + + GKQ+H H K G + V S L+D+YSK S
Sbjct: 315 REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACK 374
Query: 158 -------------------------VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQG 192
+ DA VF+ I K+ + N++ +G+ + G +
Sbjct: 375 LFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVET 434
Query: 193 LELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLI 252
LE +M L L D+ +LS+ + AC +S++ELG Q+ + T ++SD + SSLI
Sbjct: 435 LEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQV--FARATIVGLDSDQVVSSSLI 492
Query: 253 EMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEE 312
++Y KCG V+ ++VF V+S D V W SM+ Y NG+ E IDLFK+M
Sbjct: 493 DLYCKCGFVEHGRRVFDT-MVKS------DEVPWNSMISGYATNGQGFEAIDLFKKMSVA 545
Query: 313 GIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQK 372
GIRP I F+ V++AC + G V G K FESM + P EH+SC+VDLL RAG +++
Sbjct: 546 GIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEE 605
Query: 373 AWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSN 432
A L+ + + G SMW ++L CV G +GK A ++ +EL+P N+ + LS
Sbjct: 606 AINLVEEMPFDVDG----SMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSA 661
Query: 433 LYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
++A G W+ +R +++E + K+ G SW
Sbjct: 662 IFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 156/367 (42%), Gaps = 60/367 (16%)
Query: 56 HLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLT 115
L F M + + N ++ + G+ AL F + N D L + L
Sbjct: 139 ELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL---NFSADAITLTTVLK 195
Query: 116 ASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVC 175
A + + + GKQIHA + G + S+LV++Y+K ++ A+ + ++I E +
Sbjct: 196 ACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHS 255
Query: 176 ANALLSGYGEAG------------------LWAQGLELV----RKMPVLRL--------K 205
+AL+SGY G LW + KM L L +
Sbjct: 256 LSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNETR 315
Query: 206 YDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQ 265
D TL+A + AC GL +E G+Q+H + + + D+ + S+L++MY KCG +A
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACK--FGLIDDIVVASTLLDMYSKCGSPMEAC 373
Query: 266 QVF----------------------KLDGVESRNER--SRDVVLWTSMLGVYGRNGKYKE 301
++F ++D + ER ++ ++ W SM + +NG E
Sbjct: 374 KLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVE 433
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
++ F +M + + D ++ +VISAC + G + F + + L+ S L+
Sbjct: 434 TLEYFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVF-ARATIVGLDSDQVVSSSLI 492
Query: 362 DLLCRAG 368
DL C+ G
Sbjct: 493 DLYCKCG 499
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 145/326 (44%), Gaps = 22/326 (6%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMH 99
L ++I Y +C + F+ + + + + +N + + F + G L F MH
Sbjct: 386 LLNSMIKVYFSC---GRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMH 442
Query: 100 TNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVK 159
++P D +L S ++A + ++ + G+Q+ A +G S V S+L+DLY K V+
Sbjct: 443 KLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVE 502
Query: 160 DAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACT 219
VFD + + + V N+++SGY G + ++L +KM V ++ Q T L AC
Sbjct: 503 HGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACN 562
Query: 220 GLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKA-----QQVFKLDGVE 274
VE GR+L ++ H D S ++++ + G V++A + F +DG
Sbjct: 563 YCGLVEEGRKLFE-SMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDG-- 619
Query: 275 SRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQV 334
+W+S+L NG YK + E + E + +A++ + + +G
Sbjct: 620 ---------SMWSSILRGCVANG-YKAMGKKAAEKIIELEPENSVAYVQLSAIFATSGDW 669
Query: 335 HAGVKYFESM-SNEFKLNPGPEHYSC 359
+ + M N NPG C
Sbjct: 670 ESSALVRKLMRENNVTKNPGSSWTDC 695
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/408 (20%), Positives = 152/408 (37%), Gaps = 102/408 (25%)
Query: 6 IQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFK 65
++ L C + ++ +G LL+ G L + + +L+ Y+ + N F
Sbjct: 30 VRLLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSR---SGKMGIARNLFD 86
Query: 66 CMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNF 125
M N +N +I + G +L F M +
Sbjct: 87 EMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMMPERD----------------------- 123
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
G+S +V V ++K + A +F+ +PEK+ V N+LL GY
Sbjct: 124 -----------GYSWNVVVSG-----FAKAGELSVARRLFNAMPEKDVVTLNSLLHGYIL 167
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
G + L L ++ L D TL+ L+AC L A++ G+Q+H+ +L
Sbjct: 168 NGYAEEALRLFKE---LNFSADAITLTTVLKACAELEALKCGKQIHAQIL---------- 214
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
+ GVE D + +S++ VY + G + +
Sbjct: 215 ------------------------IGGVEC------DSKMNSSLVNVYAKCGDLR----M 240
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLC 365
MLE+ PD + +IS + G+V+ F+ SN + ++ ++
Sbjct: 241 ASYMLEQIREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVI-----LWNSMI---- 291
Query: 366 RAGELQKAWELLNQTLYKGMGNCTIS---MWGALLNACVDCGNIELGK 410
+G + ++ L+ M N T A++NAC+ G +E GK
Sbjct: 292 -SGYIANNMKMEALVLFNEMRNETREDSRTLAAVINACIGLGFLETGK 338
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/460 (30%), Positives = 240/460 (52%), Gaps = 29/460 (6%)
Query: 12 CHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTN--LIAAYATCLPKNHLQTLHNFFKCMNS 69
C + + + +H +L + G D+H N LI YA C + + L F +
Sbjct: 142 CAKLEEIGVGRSVHSSLFKVG---LERDVHINHSLIMMYAKCGQVGYARKL---FDEITE 195
Query: 70 TNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQI 129
+ + +N +IS + G+ A+ F M D L S L A S + D+ G+ +
Sbjct: 196 RDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLL 255
Query: 130 H--AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
A K+G S+ F+GS L+ +Y K + A VF+++ +K+ V A+++ Y + G
Sbjct: 256 EEMAITKKIGLST--FLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNG 313
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
++ +L +M + D TLS L AC + A+ELG+Q+ ++ + ++ ++++
Sbjct: 314 KSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELS--LQHNIYV 371
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
+ L++MYGKCG V++A +VF + + +NE + W +M+ Y G KE + LF
Sbjct: 372 ATGLVDMYGKCGRVEEALRVF--EAMPVKNEAT-----WNAMITAYAHQGHAKEALLLFD 424
Query: 308 EMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRA 367
M + P I F+ V+SAC H G VH G +YF MS+ F L P EHY+ ++DLL RA
Sbjct: 425 RM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 481
Query: 368 GELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALEL-DPHNAGI 426
G L +AWE + + G M A+L AC ++ + + A + +E+ + NAG
Sbjct: 482 GMLDEAWEFMERF----PGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGN 537
Query: 427 CILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
++ SN+ A MWDE +R ++++RG+ K GCSW+++
Sbjct: 538 YVISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEI 577
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 99/315 (31%), Positives = 160/315 (50%), Gaps = 15/315 (4%)
Query: 91 ALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVD 150
AL+ + M + + D + A +++ ++ G+ +H+ + K+G V + +L+
Sbjct: 116 ALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIM 175
Query: 151 LYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFT 210
+Y+K V A +FDEI E++TV N+++SGY EAG ++L RKM + D+ T
Sbjct: 176 MYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERT 235
Query: 211 LSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKL 270
L + L AC+ L + GR L + T I FL S LI MYGKCG + A++VF
Sbjct: 236 LVSMLGACSHLGDLRTGRLLEEMAI--TKKIGLSTFLGSKLISMYGKCGDLDSARRVFN- 292
Query: 271 DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGH 330
+D V WT+M+ VY +NGK E LF EM + G+ PD TV+SACG
Sbjct: 293 ------QMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGS 346
Query: 331 TGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTI 390
G + G K E+ ++E L + LVD+ + G +++A +++ M
Sbjct: 347 VGALELG-KQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALR-----VFEAMPVKNE 400
Query: 391 SMWGALLNACVDCGN 405
+ W A++ A G+
Sbjct: 401 ATWNAMITAYAHQGH 415
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 150/486 (30%), Positives = 249/486 (51%), Gaps = 53/486 (10%)
Query: 17 NLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFN 76
NL +K+ H ++ TG L+ + N+ C HL+ ++ F N N
Sbjct: 27 NLKTLKQSHCYMIITG----LNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNTYLHN 82
Query: 77 VIISNFCRKGFP---FLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHV 133
+I P +A+T + + DT+ L + RV+DV FG+QIH V
Sbjct: 83 TMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQV 142
Query: 134 GKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG------ 187
G+ SSV V + L+ +Y + DA +FDE+ K+ NALL+GYG+ G
Sbjct: 143 VVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEMDEAR 202
Query: 188 -------LW--------------------AQGLELVRKMPVLRLKYDQFTLSAALRACTG 220
W ++ +E+ ++M + ++ D+ TL A L AC
Sbjct: 203 SLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACAD 262
Query: 221 LSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS 280
L ++ELG ++ SYV + V L +++I+MY K G + KA VF E NER
Sbjct: 263 LGSLELGERICSYV--DHRGMNRAVSLNNAVIDMYAKSGNITKALDVF-----ECVNER- 314
Query: 281 RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKY 340
+VV WT+++ +G E + +F M++ G+RP+ + F+ ++SAC H G V G +
Sbjct: 315 -NVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRL 373
Query: 341 FESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNAC 400
F SM +++ ++P EHY C++DLL RAG+L++A E++ +K ++WG+LL A
Sbjct: 374 FNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKA----NAAIWGSLLAAS 429
Query: 401 VDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVG 460
++ELG+ A ++L+P+N+G +LL+NLY+ G WDE +R ++K G++K G
Sbjct: 430 NVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAG 489
Query: 461 CSWVQV 466
S ++V
Sbjct: 490 ESSIEV 495
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 225 bits (574), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 233/459 (50%), Gaps = 47/459 (10%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMH 99
+H I +A+C ++ F + + +N +I+ + + G A+ + M
Sbjct: 193 VHNASIHMFASC---GDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYVYKLME 249
Query: 100 TNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVK 159
+ V D + +++ S + D+N GK+ + +V + G ++ + +AL+D++SK +
Sbjct: 250 SEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIH 309
Query: 160 DAALVFDEIPEKNTVCANALLSGYGEAGL------------------W------------ 189
+A +FD + ++ V ++SGY GL W
Sbjct: 310 EARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLWNAMIGGSVQAKR 369
Query: 190 -AQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
L L ++M K D+ T+ L AC+ L A+++G +H Y+ + + + +V L
Sbjct: 370 GQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK--YSLSLNVALG 427
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
+SL++MY KCG + +A VF G+++RN + +T+++G +G I F E
Sbjct: 428 TSLVDMYAKCGNISEALSVFH--GIQTRNS-----LTYTAIIGGLALHGDASTAISYFNE 480
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAG 368
M++ GI PD I F+ ++SAC H G + G YF M + F LNP +HYS +VDLL RAG
Sbjct: 481 MIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAG 540
Query: 369 ELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICI 428
L++A L+ + ++WGALL C GN+ELG+ A ++ LELDP ++GI +
Sbjct: 541 LLEEADRLMESMPMEA----DAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYV 596
Query: 429 LLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQVT 467
LL +Y MW++ R ++ ERG+ K GCS ++V
Sbjct: 597 LLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVN 635
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 177/407 (43%), Gaps = 49/407 (12%)
Query: 1 MSNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTL 60
+ N ++ L +C K L +K++ ++ G L ++ + A+ +L
Sbjct: 52 LHNPLLSLLEKC---KLLLHLKQIQAQMIING--LILDPFASSRLIAFCALSESRYLDYS 106
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLD-----TYALCSTLT 115
K + + N +NV I F P + + M + TY + +
Sbjct: 107 VKILKGIENPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVC 166
Query: 116 ASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVC 175
A R++ + G I HV KL V +A + +++ +++A VFDE P ++ V
Sbjct: 167 ADLRLS--SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVS 224
Query: 176 ANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVL 235
N L++GY + G + + + + M +K D T+ + +C+ L + G++ + YV
Sbjct: 225 WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV- 283
Query: 236 RTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESR------------------- 276
+ + + L ++L++M+ KCG + +A+++F D +E R
Sbjct: 284 -KENGLRMTIPLVNALMDMFSKCGDIHEARRIF--DNLEKRTIVSWTTMISGYARCGLLD 340
Query: 277 -------NERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG 329
+ +DVVLW +M+G + + ++ + LF+EM +PD I + +SAC
Sbjct: 341 VSRKLFDDMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACS 400
Query: 330 HTGQVHAGV---KYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
G + G+ +Y E S + G + LVD+ + G + +A
Sbjct: 401 QLGALDVGIWIHRYIEKYSLSLNVALG----TSLVDMYAKCGNISEA 443
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 225 bits (573), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 129/384 (33%), Positives = 214/384 (55%), Gaps = 14/384 (3%)
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
F + P+++L M N+ D + L S + + ++ + G+ +H K G+ +
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV 201
VFVGS+LVD+Y+K + A +FDE+P++N V + ++ GY + G + L L ++
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
L + ++ S+ + C + +ELGRQ+H L +S F+ SSL+ +Y KCG+
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQIHG--LSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 262 KKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAF 321
+ A QVF V +++ +W +ML Y ++ ++VI+LFK M G++P+ I F
Sbjct: 269 EGAYQVFNEVPV-------KNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITF 321
Query: 322 LTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTL 381
L V++AC H G V G YF+ M E ++ P +HY+ LVD+L RAG LQ+A E++
Sbjct: 322 LNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP 380
Query: 382 YKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWD 441
+ T S+WGALL +C N EL A + EL P ++G+ I LSN YA G ++
Sbjct: 381 I----DPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFE 436
Query: 442 EIGHLRVVIKERGLRKDVGCSWVQ 465
+ R ++++RG +K+ G SWV+
Sbjct: 437 DAAKARKLLRDRGEKKETGLSWVE 460
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 225 bits (573), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 139/424 (32%), Positives = 230/424 (54%), Gaps = 33/424 (7%)
Query: 50 TCLPKN-HLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAF-SFMHTNNVPLDT 107
+C +N + + +FF M + +N +I+ + R+G A F S M N V +
Sbjct: 132 SCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARELFYSMMEKNEVSWNA 191
Query: 108 ----YALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAAL 163
Y C L +S H K+ V +A++ Y K V+ A
Sbjct: 192 MISGYIECGDLEKAS-------------HFFKVAPVRGVVAWTAMITGYMKAKKVELAEA 238
Query: 164 VFDEIP-EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS 222
+F ++ KN V NA++SGY E GL+L R M ++ + LS+AL C+ LS
Sbjct: 239 MFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRD 282
A++LGRQ+H V ++T + +DV +SLI MY KCG + A ++F++ + +D
Sbjct: 299 ALQLGRQIHQIVSKST--LCNDVTALTSLISMYCKCGELGDAWKLFEV-------MKKKD 349
Query: 283 VVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFE 342
VV W +M+ Y ++G + + LF+EM++ IRPD I F+ V+ AC H G V+ G+ YFE
Sbjct: 350 VVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFE 409
Query: 343 SMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVD 402
SM ++K+ P P+HY+C+VDLL RAG+L++A +L+ ++ +++G LL AC
Sbjct: 410 SMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHA----AVFGTLLGACRV 465
Query: 403 CGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCS 462
N+EL + A ++ L+L+ NA + L+N+YA W+++ +R +KE + K G S
Sbjct: 466 HKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKESNVVKVPGYS 525
Query: 463 WVQV 466
W+++
Sbjct: 526 WIEI 529
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 139/333 (41%), Gaps = 29/333 (8%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
N II+ R G AL F M N L SR+ + + Q+ +
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAH---QLFDEIP 120
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
+ F + ++ Y + + + A FD +P K+ N +++GY G + E
Sbjct: 121 E----PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKARE 176
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
L M ++ ++ + +A + + +L + H + + V +++I
Sbjct: 177 LFYSM----MEKNEVSWNAMISGY--IECGDLEKASHFFKVAPVR----GVVAWTAMITG 226
Query: 255 YGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGI 314
Y K V+ A+ +FK V ++++V W +M+ Y N + ++ + LF+ MLEEGI
Sbjct: 227 YMKAKKVELAEAMFKDMTV------NKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGI 280
Query: 315 RPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAW 374
RP+ + + C + G + + +S N + L+ + C+ GEL AW
Sbjct: 281 RPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCN-DVTALTSLISMYCKCGELGDAW 339
Query: 375 ELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
+ L++ M + W A+++ GN +
Sbjct: 340 K-----LFEVMKKKDVVAWNAMISGYAQHGNAD 367
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 136/448 (30%), Positives = 231/448 (51%), Gaps = 24/448 (5%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
+++H +++R G L + T ++ Y C L F M P+ ++
Sbjct: 204 RQIHAHVIRAG-LCSNTSIETGIVNMYVKC---GWLVGAKRVFDQMAVKKPVACTGLMVG 259
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
+ + G AL F + T V D++ L A + + ++N GKQIHA V KLG S
Sbjct: 260 YTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESE 319
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV 201
V VG+ LVD Y K SS + A F EI E N V +A++SGY + +Q E V+
Sbjct: 320 VSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQM---SQFEEAVKTFKS 376
Query: 202 LRLK----YDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGK 257
LR K + FT ++ +AC+ L+ +G Q+H+ ++ + + + +S+LI MY K
Sbjct: 377 LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRS--LIGSQYGESALITMYSK 434
Query: 258 CGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPD 317
CG + A +VF ES + + D+V WT+ + + G E + LF++M+ G++P+
Sbjct: 435 CGCLDDANEVF-----ESMD--NPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPN 487
Query: 318 GIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELL 377
+ F+ V++AC H G V G ++M ++ + P +HY C++D+ R+G L +A + +
Sbjct: 488 SVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFM 547
Query: 378 NQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARF 437
++ W L+ C N+ELG++AG+ +LDP + +L NLY
Sbjct: 548 KNMPFEP----DAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWA 603
Query: 438 GMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
G W+E + ++ ER L+K++ CSW+Q
Sbjct: 604 GKWEEAAEMMKLMNERMLKKELSCSWIQ 631
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 200/466 (42%), Gaps = 51/466 (10%)
Query: 12 CHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTN 71
C ++LS + LH + +R G L ++ Y C L+ F M+ N
Sbjct: 93 CRELRSLSHGRLLH-DRMRMGIENPSVLLQNCVLQMYCEC---RSLEDADKLFDEMSELN 148
Query: 72 PLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHA 131
+ +IS + +G A+ FS M + + + L + ++FG+QIHA
Sbjct: 149 AVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHA 208
Query: 132 HVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQ 191
HV + G S+ + + +V++Y K + A VFD++ K V L+ GY +AG
Sbjct: 209 HVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARD 268
Query: 192 GLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSL 251
L+L + +++D F S L+AC L + LG+Q+H+ V + +ES+V + + L
Sbjct: 269 ALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKL--GLESEVSVGTPL 326
Query: 252 IEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM-- 309
++ Y KC + A + F+ R + V W++++ Y + +++E + FK +
Sbjct: 327 VDFYIKCSSFESACRAFQ-------EIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 310 -----LEEGIRPDGIAFLTVISACGHTGQVHA--------GVKYFESM------------ 344
L +V++ C GQVHA G +Y ES
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLD 439
Query: 345 -SNEF---KLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNAC 400
+NE NP ++ + G +A L + + GM +++ + A+L AC
Sbjct: 440 DANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVT-FIAVLTAC 498
Query: 401 VDCGNIELGKLAGQRALELDPHNAGICI----LLSNLYARFGMWDE 442
G +E GK L +N I + ++YAR G+ DE
Sbjct: 499 SHAGLVEQGKHCLDTMLR--KYNVAPTIDHYDCMIDIYARSGLLDE 542
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 120/247 (48%), Gaps = 12/247 (4%)
Query: 94 AFSF---MHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVD 150
AF F M V + +Y+ A + ++ G+ +H + + SV + + ++
Sbjct: 67 AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQNCVLQ 126
Query: 151 LYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFT 210
+Y + S++DA +FDE+ E N V ++S Y E G+ + + L M K
Sbjct: 127 MYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPPSSM 186
Query: 211 LSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKL 270
+ L++ A++ GRQ+H++V+R + S+ +++ ++ MY KCG + A++VF
Sbjct: 187 YTTLLKSLVNPRALDFGRQIHAHVIRA--GLCSNTSIETGIVNMYVKCGWLVGAKRVFDQ 244
Query: 271 DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGH 330
V + V T ++ Y + G+ ++ + LF +++ EG+ D F V+ AC
Sbjct: 245 MAV-------KKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACAS 297
Query: 331 TGQVHAG 337
+++ G
Sbjct: 298 LEELNLG 304
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 24/211 (11%)
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES-DVFLQS 249
+ E +++M + ++ AC L ++ GR LH R IE+ V LQ+
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD---RMRMGIENPSVLLQN 122
Query: 250 SLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
+++MY +C ++ A ++F D + N SR T+M+ Y G + + LF M
Sbjct: 123 CVLQMYCECRSLEDADKLF--DEMSELNAVSR-----TTMISAYAEQGILDKAVGLFSGM 175
Query: 310 LEEGIRPDGIAFLTVIS------ACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
L G +P + T++ A Q+HA V SN + G +V++
Sbjct: 176 LASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNT-SIETG------IVNM 228
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWG 394
+ G L A + +Q K CT M G
Sbjct: 229 YVKCGWLVGAKRVFDQMAVKKPVACTGLMVG 259
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 129/395 (32%), Positives = 213/395 (53%), Gaps = 14/395 (3%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N+I + G AL S M LD A+ L A S + + GK+IH
Sbjct: 248 WNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI 307
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCA-NALLSGYGEAGLWAQGL 193
+ V + L+ +YSK ++ A +VF + E+N++C N+++SGY + +
Sbjct: 308 HSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQT-EENSLCTWNSIISGYAQLNKSEEAS 366
Query: 194 ELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIE 253
L+R+M V + + TL++ L C ++ ++ G++ H Y+LR + L +SL++
Sbjct: 367 HLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKC-FKDYTMLWNSLVD 425
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
+Y K G + A+QV L RD V +TS++ YG G+ + LFKEM G
Sbjct: 426 VYAKSGKIVAAKQVSDL-------MSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSG 478
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
I+PD + + V+SAC H+ VH G + F M E+ + P +H+SC+VDL RAG L KA
Sbjct: 479 IKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKA 538
Query: 374 WELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNL 433
++++ YK G + W LLNAC GN ++GK A ++ LE+ P N G +L++N+
Sbjct: 539 KDIIHNMPYKPSG----ATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANM 594
Query: 434 YARFGMWDEIGHLRVVIKERGLRKDVGCSWVQVTS 468
YA G W ++ +R ++++ G++KD GC+W+ S
Sbjct: 595 YAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDS 629
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/338 (22%), Positives = 153/338 (45%), Gaps = 44/338 (13%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
+PL +NV+I+++ + + A+ M + + D + S L A DV FG+ +H
Sbjct: 108 HPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVH 167
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWA 190
+ + SS++V +AL+ +Y + ++ A +FD + E++ V NA+++ Y G+W+
Sbjct: 168 GSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWS 227
Query: 191 QGLELVRKM------------------------------PVLRLK-----YDQFTLSAAL 215
+ EL KM + R++ D + L
Sbjct: 228 EAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMIIGL 287
Query: 216 RACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVES 275
+AC+ + A+ LG+++H + +++D +V +++LI MY KC ++ A VF
Sbjct: 288 KACSLIGAIRLGKEIHGLAIHSSYDGIDNV--RNTLITMYSKCKDLRHALIVF------- 338
Query: 276 RNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVH 335
R + W S++ Y + K +E L +EML G +P+ I +++ C +
Sbjct: 339 RQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQ 398
Query: 336 AGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
G ++ + ++ LVD+ ++G++ A
Sbjct: 399 HGKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAA 436
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 112/262 (42%), Gaps = 12/262 (4%)
Query: 85 KGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFV 144
K F L L + S + + L ++ S L+A V G Q+HAH G +
Sbjct: 24 KTFSLLRLQSSSAVSDD---LVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVL 80
Query: 145 GSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRL 204
LV YS + +A + + + + N L++ Y + L+ + + ++M +
Sbjct: 81 VPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGI 140
Query: 205 KYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKA 264
+ D FT + L+AC V GR +H + +++ +S +++ ++LI MY + + A
Sbjct: 141 RPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSSY--KSSLYVCNALISMYKRFRNMGIA 198
Query: 265 QQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTV 324
+++F RD V W +++ Y G + E +LF +M G+ I + +
Sbjct: 199 RRLFD-------RMFERDAVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNII 251
Query: 325 ISACGHTGQVHAGVKYFESMSN 346
C TG + M N
Sbjct: 252 SGGCLQTGNYVGALGLISRMRN 273
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 224 bits (572), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 135/474 (28%), Positives = 241/474 (50%), Gaps = 48/474 (10%)
Query: 23 KLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNF 82
+LHG + TL + T + YA+C N+ + N F M+ + + +N +I +
Sbjct: 132 ELHGVAFKIATLCDPF-VETGFMDMYASCGRINYAR---NVFDEMSHRDVVTWNTMIERY 187
Query: 83 CRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH------------ 130
CR G A F M +NV D LC+ ++A R ++ + + I+
Sbjct: 188 CRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDT 247
Query: 131 ----------AHVGKLGWSS---------SVFVGSALVDLYSKLSSVKDAALVFDEIPEK 171
A G + + ++FV +A+V YSK + DA ++FD+ +K
Sbjct: 248 HLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKK 307
Query: 172 NTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLH 231
+ VC ++S Y E+ + L + +M +K D ++ + + AC L ++ + +H
Sbjct: 308 DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVH 367
Query: 232 SYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
S + + +ES++ + ++LI MY KCG + + VF+ R+VV W+SM+
Sbjct: 368 SCI--HVNGLESELSINNALINMYAKCGGLDATRDVFE-------KMPRRNVVSWSSMIN 418
Query: 292 VYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLN 351
+G+ + + LF M +E + P+ + F+ V+ C H+G V G K F SM++E+ +
Sbjct: 419 ALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNIT 478
Query: 352 PGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKL 411
P EHY C+VDL RA L++A E++ + +WG+L++AC G +ELGK
Sbjct: 479 PKLEHYGCMVDLFGRANLLREALEVIESMPVAS----NVVIWGSLMSACRIHGELELGKF 534
Query: 412 AGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
A +R LEL+P + G +L+SN+YAR W+++ ++R V++E+ + K+ G S +
Sbjct: 535 AAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRID 588
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 191/428 (44%), Gaps = 50/428 (11%)
Query: 2 SNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLH 61
+N+I++ L C K+L+ IK+LH ++LRT H L++ L + N L+
Sbjct: 12 ANTILEKLSFC---KSLNHIKQLHAHILRT---VINHKLNSFLFNLSVSSSSINLSYALN 65
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
F + + FN + + R P + + + LD ++ L A S+V+
Sbjct: 66 VFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVS 125
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
+ G ++H K+ FV + +D+Y+ + A VFDE+ ++ V N ++
Sbjct: 126 ALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIE 185
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
Y GL + +L +M + D+ L + AC + R ++ +++ +D+
Sbjct: 186 RYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE--NDV 243
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVF----------------------KLDGVESRNER 279
D L ++L+ MY G + A++ F +LD + ++
Sbjct: 244 RMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQ 303
Query: 280 S--RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTG----- 332
+ +D+V WT+M+ Y + +E + +F+EM GI+PD ++ +VISAC + G
Sbjct: 304 TEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKA 363
Query: 333 -QVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTIS 391
VH+ + + + +E +N + L+++ + G L + +++ M +
Sbjct: 364 KWVHSCI-HVNGLESELSIN------NALINMYAKCGGLDAT-----RDVFEKMPRRNVV 411
Query: 392 MWGALLNA 399
W +++NA
Sbjct: 412 SWSSMINA 419
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 136/307 (44%), Gaps = 20/307 (6%)
Query: 104 PLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAAL 163
P+ + A + L S +N KQ+HAH+ + + + + + S ++ A
Sbjct: 6 PIASTAANTILEKLSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALN 65
Query: 164 VFDEIPE-KNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS 222
VF IP ++ N L + + +++ + + DQF+ L+A + +S
Sbjct: 66 VFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVSKVS 125
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS-R 281
A+ G +LH + D F+++ ++MY CG + A+ VF +E S R
Sbjct: 126 ALFEGMELHGVAFKIA--TLCDPFVETGFMDMYASCGRINYARNVF--------DEMSHR 175
Query: 282 DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYF 341
DVV W +M+ Y R G E LF+EM + + PD + ++SACG TG + +
Sbjct: 176 DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIY 235
Query: 342 ESM-SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNAC 400
E + N+ +++ + LV + AG + A E + + + T A+++
Sbjct: 236 EFLIENDVRMD--THLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVST-----AMVSGY 288
Query: 401 VDCGNIE 407
CG ++
Sbjct: 289 SKCGRLD 295
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 224 bits (570), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 141/463 (30%), Positives = 246/463 (53%), Gaps = 20/463 (4%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFF-KCM 67
L Q + +++ ++++H +R G +L +LI + + H F K
Sbjct: 21 LLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIE 80
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNN-VPLDTYALCSTLTASSRVNDVNFG 126
N +N +I + G A + + M + V DT+ + A + + DV G
Sbjct: 81 KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLG 140
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
+ IH+ V + G+ S ++V ++L+ LY+ V A VFD++PEK+ V N++++G+ E
Sbjct: 141 ETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAEN 200
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRT--THDIESD 244
G + L L +M +K D FT+ + L AC + A+ LG+++H Y+++ T ++ S
Sbjct: 201 GKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS- 259
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVID 304
+ L+++Y +CG V++A+ +F D + +N V WTS++ NG KE I+
Sbjct: 260 ---SNVLLDLYARCGRVEEAKTLF--DEMVDKNS-----VSWTSLIVGLAVNGFGKEAIE 309
Query: 305 LFKEMLE-EGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
LFK M EG+ P I F+ ++ AC H G V G +YF M E+K+ P EH+ C+VDL
Sbjct: 310 LFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 369
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHN 423
L RAG+++KA+E + + + +W LL AC G+ +L + A + L+L+P++
Sbjct: 370 LARAGQVKKAYEYIKSMPMQP----NVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNH 425
Query: 424 AGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+G +LLSN+YA W ++ +R + G++K G S V+V
Sbjct: 426 SGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 468
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 124/425 (29%), Positives = 230/425 (54%), Gaps = 17/425 (4%)
Query: 42 TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN 101
++++ Y C + + L F M + + + +++ F + G A+ + M
Sbjct: 155 SSVLNLYMKCGKMDEAEVL---FGKMAKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNE 211
Query: 102 NVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
D + L AS + D G+ +H ++ + G +V V ++LVD+Y+K+ ++ A
Sbjct: 212 GFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVA 271
Query: 162 ALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGL 221
+ VF + K V +L+SG+ + GL + E V +M L + D TL L AC+ +
Sbjct: 272 SRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQV 331
Query: 222 SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR 281
+++ GR +H Y+L+ H + D ++L++MY KCG + ++++F+ G +
Sbjct: 332 GSLKTGRLVHCYILKR-HVL--DRVTATALMDMYSKCGALSSSREIFEHVG-------RK 381
Query: 282 DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYF 341
D+V W +M+ YG +G +EV+ LF +M E I PD F +++SA H+G V G +F
Sbjct: 382 DLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGLVEQGQHWF 441
Query: 342 ESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACV 401
M N++K+ P +HY CL+DLL RAG +++A +++N + + N + +W ALL+ C+
Sbjct: 442 SVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINS---EKLDN-ALPIWVALLSGCI 497
Query: 402 DCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGC 461
+ N+ +G +A + L+L+P + GI L+SN +A W E+ +R +++ + K G
Sbjct: 498 NHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGY 557
Query: 462 SWVQV 466
S ++V
Sbjct: 558 SAIEV 562
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 151/332 (45%), Gaps = 14/332 (4%)
Query: 6 IQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFK 65
I+FL ++K I ++H ++ TG L + +LIA +C + F
Sbjct: 20 IKFLQS--ISKLKRHITQIHAFVISTGNLLNGSSISRDLIA---SCGRIGEISYARKVFD 74
Query: 66 CMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNF 125
+ +N +I + R P L + M + D+ T+ A +
Sbjct: 75 ELPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEK 134
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
G+ + G+ + VFV S++++LY K + +A ++F ++ +++ +C +++G+ +
Sbjct: 135 GEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQ 194
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
AG + +E R+M D+ + L+A L ++GR +H Y+ RT + +V
Sbjct: 195 AGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRT--GLPMNV 252
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
+++SL++MY K G ++ A +VF + V W S++ + +NG + +
Sbjct: 253 VVETSLVDMYAKVGFIEVASRVFS-------RMMFKTAVSWGSLISGFAQNGLANKAFEA 305
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
EM G +PD + + V+ AC G + G
Sbjct: 306 VVEMQSLGFQPDLVTLVGVLVACSQVGSLKTG 337
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/432 (30%), Positives = 223/432 (51%), Gaps = 63/432 (14%)
Query: 71 NPLHFNVI--ISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
N L+ +VI RK F F FM + C++L + GKQ
Sbjct: 86 NSLYCDVIRIYKQLLRKSFELPDRFTFPFM---------FKSCASLGSCY------LGKQ 130
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE--- 185
+H H+ K G V +AL+D+Y K + DA VFDE+ E++ + N+LLSGY
Sbjct: 131 VHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQ 190
Query: 186 ----------------------------AGLWAQGLELVRKMPVLRLKYDQFTLSAALRA 217
G + + ++ R+M + ++ D+ +L + L +
Sbjct: 191 MKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPS 250
Query: 218 CTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF-KLDGVESR 276
C L ++ELG+ +H Y R ++ V ++LIEMY KCG++ +A Q+F +++G
Sbjct: 251 CAQLGSLELGKWIHLYAERRGFLKQTGVC--NALIEMYSKCGVISQAIQLFGQMEG---- 304
Query: 277 NERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHA 336
+DV+ W++M+ Y +G I+ F EM ++P+GI FL ++SAC H G
Sbjct: 305 ----KDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQE 360
Query: 337 GVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGAL 396
G++YF+ M ++++ P EHY CL+D+L RAG+L++A E+ K +WG+L
Sbjct: 361 GLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKP----DSKIWGSL 416
Query: 397 LNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLR 456
L++C GN+++ +A +EL+P + G +LL+N+YA G W+++ LR +I+ ++
Sbjct: 417 LSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLRKMIRNENMK 476
Query: 457 KDVGCSWVQVTS 468
K G S ++V +
Sbjct: 477 KTPGGSLIEVNN 488
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 54/360 (15%)
Query: 119 RVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANA 178
RV N K+I+A + G S S F+ + +VD K+ + A +F+++ N N+
Sbjct: 19 RVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNS 78
Query: 179 LLSGYGEAGLWAQGLELVRKMPVLRLKY---DQFTLSAALRACTGLSAVELGRQLHSYV- 234
++ Y L+ + + +++ LR + D+FT ++C L + LG+Q+H ++
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQL--LRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLC 136
Query: 235 -----------------------LRTTHDI-----ESDVFLQSSLIEMYGKCGLVKKAQQ 266
L H + E DV +SL+ Y + G +KKA+
Sbjct: 137 KFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKG 196
Query: 267 VFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVIS 326
+F L + +V WT+M+ Y G Y E +D F+EM GI PD I+ ++V+
Sbjct: 197 LFHL-------MLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLP 249
Query: 327 ACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMG 386
+C G + G K+ + + L+++ + G + +A +L Q M
Sbjct: 250 SCAQLGSLELG-KWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQ-----ME 303
Query: 387 NCTISMWGALLNACVDCGNIELGKLAG----QRALELDPHNAGICILLSNLYARFGMWDE 442
+ W +++ GN G + QRA ++ P+ LLS + GMW E
Sbjct: 304 GKDVISWSTMISGYAYHGNAH-GAIETFNEMQRA-KVKPNGITFLGLLSAC-SHVGMWQE 360
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/248 (21%), Positives = 111/248 (44%), Gaps = 10/248 (4%)
Query: 43 NLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNN 102
+L++ YA ++ F M + + +IS + G A+ F M
Sbjct: 180 SLLSGYARL---GQMKKAKGLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAG 236
Query: 103 VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAA 162
+ D +L S L + +++ + GK IH + + G+ V +AL+++YSK + A
Sbjct: 237 IEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAI 296
Query: 163 LVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS 222
+F ++ K+ + + ++SGY G +E +M ++K + T L AC+ +
Sbjct: 297 QLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGLLSACSHVG 356
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRD 282
+ G + ++R + IE + LI++ + G +++A ++ K ++ D
Sbjct: 357 MWQEGLRYFD-MMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMKP------D 409
Query: 283 VVLWTSML 290
+W S+L
Sbjct: 410 SKIWGSLL 417
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 147/452 (32%), Positives = 232/452 (51%), Gaps = 28/452 (6%)
Query: 31 TGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNS-------TNPLHFNVIISNFC 83
T +LF +H LH N A HL L+ F +S N ++ +I
Sbjct: 30 THSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSIEIPNSFVYDTMIRICS 89
Query: 84 RKGFPFLALTAFSFM---HTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG-WS 139
R P L L F M ++ + A + + GKQIH V K G +
Sbjct: 90 RSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFL 149
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
S V + ++ +Y + + DA VFDEIP+ + V + L++GY GL ++GLE+ ++M
Sbjct: 150 SDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEM 209
Query: 200 PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG 259
V ++ D+F+++ AL AC + A+ G+ +H +V + IESDVF+ ++L++MY KCG
Sbjct: 210 LVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFV-KKKRWIESDVFVGTALVDMYAKCG 268
Query: 260 LVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM-LEEGIRPDG 318
++ A +VF+ R+V W +++G Y G K+ + E+GI+PD
Sbjct: 269 CIETAVEVFE-------KLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDS 321
Query: 319 IAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLN 378
+ L V++AC H G + G E+M + + P EHYSC+VDL+CRAG L A +L+
Sbjct: 322 VVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIE 381
Query: 379 QTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNA----GICILLSNLY 434
+ K + S+WGALLN C N+ELG+LA Q L+L+ N + LSN+Y
Sbjct: 382 KMPMKPLA----SVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIY 437
Query: 435 ARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
E +R +I++RG+RK G S ++V
Sbjct: 438 FSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEV 469
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/461 (29%), Positives = 239/461 (51%), Gaps = 18/461 (3%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L+ C + S K +H ++ + +L L L L+ Y +C ++ F ++
Sbjct: 307 LNGCSKLGSYSLGKLIHARIIVSDSLADL-PLDNALLDMYCSC---GDMREAFYVFGRIH 362
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPL-DTYALCSTLTASSRVNDVNFGK 127
+ N + +N IIS GF A+ + + + P D Y + ++A++ GK
Sbjct: 363 NPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGK 422
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
+H V KLG+ SVFVG+ L+ +Y K + A VFD + E++ V ++ G+ G
Sbjct: 423 LLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLG 482
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
++ +M + + D F+LS+ + AC+ ++ + G H +RT D V
Sbjct: 483 NSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVC- 541
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
+L++MYGK G + A+ +F L + D+ W SMLG Y ++G ++ + F+
Sbjct: 542 -GALVDMYGKNGKYETAETIFSLAS-------NPDLKCWNSMLGAYSQHGMVEKALSFFE 593
Query: 308 EMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRA 367
++LE G PD + +L++++AC H G G K+ + E + G +HYSC+V+L+ +A
Sbjct: 594 QILENGFMPDAVTYLSLLAACSHRGSTLQG-KFLWNQMKEQGIKAGFKHYSCMVNLVSKA 652
Query: 368 GELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGIC 427
G + +A EL+ Q+ GN +W LL+ACV+ N+++G A ++ L+LDP +
Sbjct: 653 GLVDEALELIEQS---PPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATH 709
Query: 428 ILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQVTS 468
ILLSNLYA G W+++ +R I+ KD G SW++V +
Sbjct: 710 ILLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNN 750
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 183/407 (44%), Gaps = 64/407 (15%)
Query: 41 HTNLIAAYATC------------LPKNHLQTLHNF---FKCMNSTNPLHFNVIISNFCRK 85
+ NLI+ Y C +P+ ++ TL F+ ++ + LH +I
Sbjct: 25 NNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQII------- 77
Query: 86 GFPFLALTAFSFMHTNNVPLDTYAL---CSTLTASSRVNDVNFGKQIHAHV---GKLGWS 139
+ FM N + L C ++T R +QIHA V G +
Sbjct: 78 --KLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKR------ARQIHALVLTAGAGAAT 129
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQ-GLELVRK 198
S + + L+ +Y + S++ A VFD++P +N V NAL S Y +A L
Sbjct: 130 ESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTH 189
Query: 199 MPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC 258
M +K + T ++ ++ C L V +G L+S +++ + +V +Q+S++ MY C
Sbjct: 190 MAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYS--DNVVVQTSVLGMYSSC 247
Query: 259 GLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDG 318
G ++ A+++F D V +R D V W +M+ +N K ++ + F+ ML G+ P
Sbjct: 248 GDLESARRIF--DCVNNR-----DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQ 300
Query: 319 IAFLTVISACGHTGQ------VHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQK 372
+ V++ C G +HA + +S++ + L+ + L+D+ C G++++
Sbjct: 301 FTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLA-DLPLD------NALLDMYCSCGDMRE 353
Query: 373 AWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALEL 419
A+ + + + N + W ++++ C + G E L +R L +
Sbjct: 354 AFYVFGR-----IHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRM 395
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 154/340 (45%), Gaps = 28/340 (8%)
Query: 1 MSNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTN--LIAAYATCLPKNHLQ 58
+++S+++ +C L +++H +L G + N LI+ Y C L+
Sbjct: 93 IASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRC---GSLE 149
Query: 59 TLHNFFKCMNSTNPLHFNVIISNFCRK------GFPFLALTAFSFMHTNNVPLDTYA-LC 111
F M N + +N + S + R FP AF ++ N+ + +C
Sbjct: 150 QARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVC 209
Query: 112 STLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK 171
+ L DV G +++ + KLG+S +V V ++++ +YS ++ A +FD + +
Sbjct: 210 AVL------EDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNR 263
Query: 172 NTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLH 231
+ V N ++ G + GL R M + + QFT S L C+ L + LG+ +H
Sbjct: 264 DAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIH 323
Query: 232 SYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
+ ++ D +D+ L ++L++MY CG +++A VF + ++V W S++
Sbjct: 324 ARII--VSDSLADLPLDNALLDMYCSCGDMREAFYVFG-------RIHNPNLVSWNSIIS 374
Query: 292 VYGRNGKYKEVIDLFKEMLEEGI-RPDGIAFLTVISACGH 330
NG ++ + +++ +L RPD F ISA
Sbjct: 375 GCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAE 414
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 143 FVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQ---------GL 193
+ + L+ +Y + SS++ A VFD++P++N V L + + + +
Sbjct: 23 YANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGSF 82
Query: 194 ELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV-FLQSSLI 252
+++ MP+ + L+ R C ++ ++ RQ+H+ VL ++ + ++LI
Sbjct: 83 QMIFFMPLNEIASSVVELT---RKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLI 139
Query: 253 EMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE-VIDLFKEMLE 311
MY +CG +++A++VF D + RN VV + ++ Y RN + L M
Sbjct: 140 SMYVRCGSLEQARKVF--DKMPHRN-----VVSYNALYSAYSRNPDFASYAFPLTTHMAF 192
Query: 312 EGIRPDGIAFLTVISACG 329
E ++P+ F +++ C
Sbjct: 193 EYVKPNSSTFTSLVQVCA 210
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 222 bits (566), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 149/506 (29%), Positives = 239/506 (47%), Gaps = 64/506 (12%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
++ C ++LS I H +++G + L + L L H F M
Sbjct: 30 INNCRTIRDLSQI---HAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 69 STNPLHFNVIISNFCR--KGFPFLALTAFSFMHTNN-VPLDTYALCSTLTASSRVNDVNF 125
N +N II F + +A+T F M ++ V + + S L A ++ +
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 126 GKQIHAHVGKLGWSSSVFVGSALV------------------------------------ 149
GKQIH K G+ FV S LV
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 150 ---------DLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMP 200
D Y +L K A ++FD++ +++ V N ++SGY G + +E+ R+M
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 201 VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGL 260
++ + TL + L A + L ++ELG LH Y I D L S+LI+MY KCG+
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYA--EDSGIRIDDVLGSALIDMYSKCGI 324
Query: 261 VKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIA 320
++KA VF+ R R +V+ W++M+ + +G+ + ID F +M + G+RP +A
Sbjct: 325 IEKAIHVFE------RLPRE-NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 377
Query: 321 FLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQT 380
++ +++AC H G V G +YF M + L P EHY C+VDLL R+G L +A E +
Sbjct: 378 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 381 LYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMW 440
K +W ALL AC GN+E+GK +++ PH++G + LSN+YA G W
Sbjct: 438 PIKP----DDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNW 493
Query: 441 DEIGHLRVVIKERGLRKDVGCSWVQV 466
E+ +R+ +KE+ +RKD GCS + +
Sbjct: 494 SEVSEMRLRMKEKDIRKDPGCSLIDI 519
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 221 bits (563), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 239/463 (51%), Gaps = 19/463 (4%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNF 63
++ L C + + K +HG +R L L+ YA C L
Sbjct: 305 TLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAEC---GKLSDCETV 361
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
+ ++ N + +N +IS + +G AL F M T + D + L S+++A V
Sbjct: 362 LRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLV 421
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
GKQIH HV + S FV ++L+D+YSK SV A+ VF++I ++ V N++L G+
Sbjct: 422 PLGKQIHGHVIRTDVSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGF 480
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+ G + + L M L+ ++ T A ++AC+ + ++E G+ +H ++ +
Sbjct: 481 SQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGL---K 537
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
D+F ++LI+MY KCG + A+ VF R SR +V W+SM+ YG +G+ I
Sbjct: 538 DLFTDTALIDMYAKCGDLNAAETVF-------RAMSSRSIVSWSSMINAYGMHGRIGSAI 590
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
F +M+E G +P+ + F+ V+SACGH+G V G YF M + F ++P EH++C +DL
Sbjct: 591 STFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDL 649
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHN 423
L R+G+L++A+ + + + S+WG+L+N C +++ K ++ +
Sbjct: 650 LSRSGDLKEAYRTIKEMPFLA----DASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDD 705
Query: 424 AGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
G LLSN+YA G W+E LR +K L+K G S +++
Sbjct: 706 TGYYTLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEI 748
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 115/400 (28%), Positives = 198/400 (49%), Gaps = 28/400 (7%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHD-LHTNLIAAYATCLPKNHLQTLHN 62
++I + C L + +HG + R +F L + L +L+ Y+ C L +
Sbjct: 204 TMISVVEGCAELGCLRIARSVHGQITRK--MFDLDETLCNSLLTMYSKC---GDLLSSER 258
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F+ + N + + +IS++ R F AL +FS M + + + L S L++ +
Sbjct: 259 IFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGL 318
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGS-ALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
+ GK +H + + S ALV+LY++ + D V + ++N V N+L+S
Sbjct: 319 IREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLIS 378
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
Y G+ Q L L R+M R+K D FTL++++ AC V LG+Q+H +V+RT D+
Sbjct: 379 LYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRT--DV 436
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
SD F+Q+SLI+MY K G V A VF + R VV W SML + +NG E
Sbjct: 437 -SDEFVQNSLIDMYSKSGSVDSASTVFN-------QIKHRSVVTWNSMLCGFSQNGNSVE 488
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY--SC 359
I LF M + + + FL VI AC G + G + + ++ ++ + + +
Sbjct: 489 AISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKG----KWVHHKLIISGLKDLFTDTA 544
Query: 360 LVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
L+D+ + G+L A +T+++ M + +I W +++NA
Sbjct: 545 LIDMYAKCGDLNAA-----ETVFRAMSSRSIVSWSSMINA 579
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/399 (22%), Positives = 181/399 (45%), Gaps = 37/399 (9%)
Query: 16 KNLSAIKKLHGNLLRTGTLFFLHD---LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNP 72
++LS K+HG +++ G + D + T+L+ Y +L F M +
Sbjct: 115 EHLSVGGKVHGRIIKGG----VDDDAVIETSLLCMYGQ---TGNLSDAEKVFDGMPVRDL 167
Query: 73 LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAH 132
+ ++ ++S+ G AL F M + V D + S + + + + + +H
Sbjct: 168 VAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQ 227
Query: 133 VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQG 192
+ + + + ++L+ +YSK + + +F++I +KN V A++S Y +
Sbjct: 228 ITRKMFDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKA 287
Query: 193 LELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLI 252
L +M ++ + TL + L +C + + G+ +H + +R D + L +L+
Sbjct: 288 LRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYES-LSLALV 346
Query: 253 EMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEE 312
E+Y +CG + + V ++ V RN +V W S++ +Y G + + LF++M+ +
Sbjct: 347 ELYAECGKLSDCETVLRV--VSDRN-----IVAWNSLISLYAHRGMVIQALGLFRQMVTQ 399
Query: 313 GIRPDGIAFLTVISACGHTG------QVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
I+PD + ISAC + G Q+H V + +S+EF N L+D+ +
Sbjct: 400 RIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD-VSDEFVQNS-------LIDMYSK 451
Query: 367 AGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGN 405
+G + A + NQ ++ ++ W ++L GN
Sbjct: 452 SGSVDSASTVFNQIKHR-----SVVTWNSMLCGFSQNGN 485
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 162/364 (44%), Gaps = 48/364 (13%)
Query: 128 QIHAHV---GKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYG 184
Q+HAH+ G+L + L++ Y+ + S + LVF+ P ++ L+
Sbjct: 19 QLHAHLLVTGRL--RRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSFMYGVLIKCNV 76
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSA-VELGRQLHSYVLRTTHDIES 243
L ++L ++ + +F + LRAC G + +G ++H +++ ++
Sbjct: 77 WCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKG--GVDD 134
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
D +++SL+ MYG+ G + A++VF DG+ RD+V W++++ NG+ + +
Sbjct: 135 DAVIETSLLCMYGQTGNLSDAEKVF--DGMP-----VRDLVAWSTLVSSCLENGEVVKAL 187
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTG------QVHAGVKYFESMSNEFKLNPGPEHY 357
+FK M+++G+ PD + ++V+ C G VH + +E N Y
Sbjct: 188 RMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTMY 247
Query: 358 SCLVDLLCRA-----------------------GEL-QKAWELLNQTLYKGMGNCTISMW 393
S DLL GE +KA ++ + G+ ++++
Sbjct: 248 SKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLY 307
Query: 394 GALLNACVDCGNIELGKLAGQRAL--ELDPHNAGICILLSNLYARFGMWDEIGHLRVVIK 451
++L++C G I GK A+ ELDP+ + + L LYA G + + V+
Sbjct: 308 -SVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSDCETVLRVVS 366
Query: 452 ERGL 455
+R +
Sbjct: 367 DRNI 370
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 239/445 (53%), Gaps = 18/445 (4%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
K HG L+++G + L T+L+ Y C + F + + + + +I
Sbjct: 262 KWFHGCLVKSG-IELSSCLVTSLLDMYVKC---GDISNARRVFNEHSHVDLVMWTAMIVG 317
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG-WSS 140
+ G AL+ F M + + + S L+ + ++ G+ +H K+G W +
Sbjct: 318 YTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDT 377
Query: 141 SVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMP 200
+V +ALV +Y+K +DA VF+ EK+ V N+++SG+ + G + L L +M
Sbjct: 378 NV--ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMN 435
Query: 201 VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGL 260
+ + T+++ AC L ++ +G LH+Y ++ S V + ++L++ Y KCG
Sbjct: 436 SESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGD 495
Query: 261 VKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIA 320
+ A+ +F D +E +N + W++M+G YG+ G ++LF+EML++ +P+
Sbjct: 496 PQSARLIF--DTIEEKN-----TITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNEST 548
Query: 321 FLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQT 380
F +++SACGHTG V+ G KYF SM ++ P +HY+C+VD+L RAGEL++A +++ +
Sbjct: 549 FTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDIIEKM 608
Query: 381 LYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMW 440
+ C +GA L+ C +LG++ ++ L+L P +A +L+SNLYA G W
Sbjct: 609 PIQPDVRC----FGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRW 664
Query: 441 DEIGHLRVVIKERGLRKDVGCSWVQ 465
++ +R ++K+RGL K G S ++
Sbjct: 665 NQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 174/366 (47%), Gaps = 16/366 (4%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L C ++L KK+H L++ + F + + T L+ YA C +++ H F +
Sbjct: 149 LKACTELQDLDNGKKIHCQLVKVPS--FDNVVLTGLLDMYAKC---GEIKSAHKVFNDIT 203
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
N + + +I+ + + L F+ M NNV + Y + + A ++++ ++ GK
Sbjct: 204 LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKW 263
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGL 188
H + K G S + ++L+D+Y K + +A VF+E + V A++ GY G
Sbjct: 264 FHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGS 323
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
+ L L +KM + +K + T+++ L C + +ELGR +H ++ D +
Sbjct: 324 VNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG---IWDTNVA 380
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
++L+ MY KC + A+ VF++ E +D+V W S++ + +NG E + LF
Sbjct: 381 NALVHMYAKCYQNRDAKYVFEM-------ESEKDIVAWNSIISGFSQNGSIHEALFLFHR 433
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVK-YFESMSNEFKLNPGPEHYSCLVDLLCRA 367
M E + P+G+ ++ SAC G + G + S+ F + + L+D +
Sbjct: 434 MNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKC 493
Query: 368 GELQKA 373
G+ Q A
Sbjct: 494 GDPQSA 499
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 158/314 (50%), Gaps = 16/314 (5%)
Query: 17 NLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFN 76
N+ ++++ HG L G + + + T L++ Y + + F + + +
Sbjct: 56 NIDSLRQSHGVLTGNGLMGDI-SIATKLVSLYGFF---GYTKDARLVFDQIPEPDFYLWK 111
Query: 77 VIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKL 136
V++ +C + + + + D L A + + D++ GK+IH + K+
Sbjct: 112 VMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQLVKV 171
Query: 137 GWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELV 196
+V V + L+D+Y+K +K A VF++I +N VC ++++GY + L +GL L
Sbjct: 172 PSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLVLF 230
Query: 197 RKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYG 256
+M + +++T + ACT LSA+ G+ H ++++ IE L +SL++MY
Sbjct: 231 NRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKS--GIELSSCLVTSLLDMYV 288
Query: 257 KCGLVKKAQQVFKLDGVESRNERSR-DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIR 315
KCG + A++VF NE S D+V+WT+M+ Y NG E + LF++M I+
Sbjct: 289 KCGDISNARRVF--------NEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIK 340
Query: 316 PDGIAFLTVISACG 329
P+ + +V+S CG
Sbjct: 341 PNCVTIASVLSGCG 354
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 157/348 (45%), Gaps = 47/348 (13%)
Query: 118 SRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCAN 177
S+ +++ +Q H + G + + + LV LY KDA LVFD+IPE +
Sbjct: 52 SKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYLWK 111
Query: 178 ALLSGYGEAGLWAQGLELVRKMPVLR---LKYDQFTLSAALRACTGLSAVELGRQLHSYV 234
+L Y L + +E+V+ +L +YD S AL+ACT L ++ G+++H +
Sbjct: 112 VMLRCY---CLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQL 168
Query: 235 LRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYG 294
++ D + + L++MY KCG +K A +VF + R+VV WTSM+ Y
Sbjct: 169 VKVP---SFDNVVLTGLLDMYAKCGEIKSAHKVF-------NDITLRNVVCWTSMIAGYV 218
Query: 295 RNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGP 354
+N +E + LF M E + + + T+I AC +H G K+F + G
Sbjct: 219 KNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQG-KWFHGC----LVKSGI 273
Query: 355 EHYSCLV----DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE--L 408
E SCLV D+ + G++ A + N+ + + MW A++ G++ L
Sbjct: 274 ELSSCLVTSLLDMYVKCGDISNARRVFNE-----HSHVDLVMWTAMIVGYTHNGSVNEAL 328
Query: 409 GKLAGQRALELDPHNAGICILLS---------------NLYARFGMWD 441
+ +E+ P+ I +LS L + G+WD
Sbjct: 329 SLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWD 376
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 140/437 (32%), Positives = 233/437 (53%), Gaps = 46/437 (10%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNV-PLDTYALCSTLTASSRVND 122
F+ M + + +N +IS F ++G+ AL FS M +++ D + L S L+A + +
Sbjct: 235 FEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEK 294
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYS----------------------------- 153
+ GKQIH+H+ G+ S V +AL+ +YS
Sbjct: 295 LCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALL 354
Query: 154 ----KLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQF 209
KL + A +F + +++ V A++ GY + G + + + L R M + + +
Sbjct: 355 DGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSY 414
Query: 210 TLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFK 269
TL+A L + L+++ G+Q+H +++ +I S V + ++LI MY K G + A + F
Sbjct: 415 TLAAMLSVASSLASLSHGKQIHGSAVKSG-EIYS-VSVSNALITMYAKAGNITSASRAFD 472
Query: 270 LDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG 329
L E RD V WTSM+ ++G +E ++LF+ ML EG+RPD I ++ V SAC
Sbjct: 473 LIRCE------RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACT 526
Query: 330 HTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCT 389
H G V+ G +YF+ M + K+ P HY+C+VDL RAG LQ+A E + + +
Sbjct: 527 HAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP----D 582
Query: 390 ISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVV 449
+ WG+LL+AC NI+LGK+A +R L L+P N+G L+NLY+ G W+E +R
Sbjct: 583 VVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKS 642
Query: 450 IKERGLRKDVGCSWVQV 466
+K+ ++K+ G SW++V
Sbjct: 643 MKDGRVKKEQGFSWIEV 659
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 136/295 (46%), Gaps = 31/295 (10%)
Query: 141 SVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMP 200
+ F + ++ YSK + FD++P++++V ++ GY G + + + ++ M
Sbjct: 79 TAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMV 138
Query: 201 VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG- 259
++ QFTL+ L + +E G+++HS++++ + +V + +SL+ MY KCG
Sbjct: 139 KEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKL--GLRGNVSVSNSLLNMYAKCGD 196
Query: 260 ---------------------LVKKAQQVFKLDGVESRNER--SRDVVLWTSMLGVYGRN 296
++ QV ++D ++ E+ RD+V W SM+ + +
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 297 GKYKEVIDLFKEMLEEG-IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPE 355
G +D+F +ML + + PD +V+SAC + ++ G K S +
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIG-KQIHSHIVTTGFDISGI 315
Query: 356 HYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGK 410
+ L+ + R G ++ A L+ Q +G + I + ALL+ + G++ K
Sbjct: 316 VLNALISMYSRCGGVETARRLIEQ---RGTKDLKIEGFTALLDGYIKLGDMNQAK 367
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 8/230 (3%)
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
N F + + + + +I + + G A+ F M ++Y L + L+ +S +
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIP-EKNTVCANALL 180
++ GKQIH K G SV V +AL+ +Y+K ++ A+ FD I E++TV +++
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 181 SGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD 240
+ G + LEL M + L+ D T ACT V GRQ +++
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFD-MMKDVDK 546
Query: 241 IESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSML 290
I + + +++++G+ GL+++AQ+ + +E DVV W S+L
Sbjct: 547 IIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEP------DVVTWGSLL 590
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 131/432 (30%), Positives = 229/432 (53%), Gaps = 28/432 (6%)
Query: 43 NLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNN 102
+L+ Y+ C + F M + + +N +IS F + G L M
Sbjct: 358 SLMVMYSRC---GSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQG 414
Query: 103 VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVG--SALVDLYSKLSSVKD 160
+D + + L+A+S + + GKQ HA + + G F G S L+D+YSK ++
Sbjct: 415 FKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ---FEGMNSYLIDMYSKSGLIRI 471
Query: 161 AALVFDE--IPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRAC 218
+ +F+ E++ N+++SGY + G + + RKM ++ + T+++ L AC
Sbjct: 472 SQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPAC 531
Query: 219 TGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNE 278
+ + +V+LG+QLH + +R D +VF+ S+L++MY K G +K A+ +F
Sbjct: 532 SQIGSVDLGKQLHGFSIRQYLD--QNVFVASALVDMYSKAGAIKYAEDMFS-------QT 582
Query: 279 RSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGV 338
+ R+ V +T+M+ YG++G + I LF M E GI+PD I F+ V+SAC ++G + G+
Sbjct: 583 KERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGL 642
Query: 339 KYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGN--CTISMWGAL 396
K FE M + + P EHY C+ D+L R G + +A+E + KG+G +WG+L
Sbjct: 643 KIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEFV-----KGLGEEGNIAELWGSL 697
Query: 397 LNACVDCGNIELGKLAGQRALELDPHN--AGICILLSNLYARFGMWDEIGHLRVVIKERG 454
L +C G +EL + +R + D +G +LLSN+YA W + +R ++E+G
Sbjct: 698 LGSCKLHGELELAETVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKG 757
Query: 455 LRKDVGCSWVQV 466
L+K+VG S +++
Sbjct: 758 LKKEVGRSGIEI 769
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/274 (31%), Positives = 144/274 (52%), Gaps = 11/274 (4%)
Query: 107 TYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFD 166
TY L ++ A S + V G+Q H V K + + ++L+ +YS+ SV + VF
Sbjct: 320 TYLLAAS--AVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFL 377
Query: 167 EIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVEL 226
+ E++ V N ++S + + GL +GL LV +M K D T++A L A + L E+
Sbjct: 378 SMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEI 437
Query: 227 GRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLW 286
G+Q H++++R E + S LI+MY K GL++ +Q++F+ G RD W
Sbjct: 438 GKQTHAFLIRQGIQFEG---MNSYLIDMYSKSGLIRISQKLFEGSGYA-----ERDQATW 489
Query: 287 TSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSN 346
SM+ Y +NG ++ +F++MLE+ IRP+ + +++ AC G V G K S
Sbjct: 490 NSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLG-KQLHGFSI 548
Query: 347 EFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQT 380
L+ S LVD+ +AG ++ A ++ +QT
Sbjct: 549 RQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQT 582
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 195/439 (44%), Gaps = 41/439 (9%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHD----LHTNLIAAYATCLPKN---HLQTLH 61
L C TKNL A K +H +L+R L + +H +L+ Y +CL +
Sbjct: 114 LKACAETKNLKAGKAVHCHLIRC-----LQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
F M N + +N +IS + + G A F M V + + A S
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 122 DVNFGKQIHAHVGKLG--WSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANAL 179
+ + + KLG + +FV S+ + +Y++L ++ + VFD E+N N +
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 180 LSGYGEAGLWAQGLEL-VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTT 238
+ Y + + +EL + + + D+ T A A + L VELGRQ H +V +
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 239 HDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGK 298
++ + + +SL+ MY +CG V K+ VF + R RDVV W +M+ + +NG
Sbjct: 349 RELP--IVIVNSLMVMYSRCGSVHKSFGVF-------LSMRERDVVSWNTMISAFVQNGL 399
Query: 299 YKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY- 357
E + L EM ++G + D I ++SA + G ++ F + G +
Sbjct: 400 DDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIG-----KQTHAFLIRQGIQFEG 454
Query: 358 --SCLVDLLCRAGELQKAWELLNQTLYKGMGNCT--ISMWGALLNACVDCGNIELGKLAG 413
S L+D+ ++G ++ ++Q L++G G + W ++++ G+ E L
Sbjct: 455 MNSYLIDMYSKSGLIR-----ISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVF 509
Query: 414 QRALE--LDPHNAGICILL 430
++ LE + P+ + +L
Sbjct: 510 RKMLEQNIRPNAVTVASIL 528
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 154/357 (43%), Gaps = 24/357 (6%)
Query: 58 QTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPL---DTYALCSTL 114
Q F + + +N II F P AL +S M P D Y STL
Sbjct: 56 QLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMK-KTAPFTNCDAYTYSSTL 114
Query: 115 TASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKD------AALVFDEI 168
A + ++ GK +H H+ + +SS V ++L+++Y + D VFD +
Sbjct: 115 KACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNM 174
Query: 169 PEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGR 228
KN V N L+S Y + G A+ M + +K + A + +++
Sbjct: 175 RRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKAN 234
Query: 229 QLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTS 288
+ +L+ + D+F+ SS I MY + G ++ +++VF D RN + +W +
Sbjct: 235 VFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVF--DSCVERN-----IEVWNT 287
Query: 289 MLGVYGRNGKYKEVIDLFKEML-EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNE 347
M+GVY +N E I+LF E + + I D + +L SA QV G ++ +S
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 348 FKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG 404
F+ P S +V + R G + K++ ++ M + W +++A V G
Sbjct: 348 FRELPIVIVNSLMV-MYSRCGSVHKSF-----GVFLSMRERDVVSWNTMISAFVQNG 398
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 139/432 (32%), Positives = 224/432 (51%), Gaps = 22/432 (5%)
Query: 40 LHTNLIAAYATC--LPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSF 97
+ + L+ Y+ C P +L FK M + + + +IS C+ G AL F
Sbjct: 410 IESALLTLYSKCGCDPDAYL-----VFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGD 464
Query: 98 MHTNNVPL--DTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKL 155
M ++ L D+ + S A + + + FG Q+H + K G +VFVGS+L+DLYSK
Sbjct: 465 MKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKC 524
Query: 156 SSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAAL 215
+ A VF + +N V N+++S Y L ++L M + D ++++ L
Sbjct: 525 GLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVL 584
Query: 216 RACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVES 275
A + +++ G+ LH Y LR I SD L+++LI+MY KCG K A+ +FK
Sbjct: 585 VAISSTASLLKGKSLHGYTLRL--GIPSDTHLKNALIDMYVKCGFSKYAENIFK------ 636
Query: 276 RNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVH 335
+ + ++ W M+ YG +G + LF EM + G PD + FL++ISAC H+G V
Sbjct: 637 -KMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVE 695
Query: 336 AGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGA 395
G FE M ++ + P EHY+ +VDLL RAG L++A+ + + S+W
Sbjct: 696 EGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEA----DSSIWLC 751
Query: 396 LLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGL 455
LL+A N+ELG L+ ++ L ++P + L NLY G+ +E L ++KE+GL
Sbjct: 752 LLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGL 811
Query: 456 RKDVGCSWVQVT 467
K GCSW++V+
Sbjct: 812 HKQPGCSWIEVS 823
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 156/325 (48%), Gaps = 14/325 (4%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
K++HG +LR +L L T LI Y + F + + +N + +NV+I
Sbjct: 190 KQIHGFMLRN-SLDTDSFLKTALIDMYFKF--GLSIDAWRVFVEIEDKSNVVLWNVMIVG 246
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
F G +L + N+V L + + L A S+ + FG+QIH V K+G +
Sbjct: 247 FGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHND 306
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV 201
+V ++L+ +YSK V +A VF + +K NA+++ Y E L+L M
Sbjct: 307 PYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQ 366
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
+ D FTLS + C+ L G+ +H+ + + I+S ++S+L+ +Y KCG
Sbjct: 367 KSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK--RPIQSTSTIESALLTLYSKCGCD 424
Query: 262 KKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML--EEGIRPDGI 319
A VFK + +D+V W S++ +NGK+KE + +F +M ++ ++PD
Sbjct: 425 PDAYLVFK-------SMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 477
Query: 320 AFLTVISACGHTGQVHAGVKYFESM 344
+V +AC + G++ SM
Sbjct: 478 IMTSVTNACAGLEALRFGLQVHGSM 502
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 175/382 (45%), Gaps = 54/382 (14%)
Query: 35 FFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTA 94
F LHD+H I C+ +++ +P N I +KG AL
Sbjct: 3 FKLHDVH---IRRGLCCVADSYI-------------SPASINSGIRALIQKGEYLQALHL 46
Query: 95 FSFMHTNNVPLDT--YALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLY 152
+S H + P T + S L A S + ++++GK IH V LGW F+ ++LV++Y
Sbjct: 47 YS-KHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMY 105
Query: 153 SKLSSVKDAALVFD-------EIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLK 205
K + A VFD + ++ N+++ GY + + +G+ R+M V ++
Sbjct: 106 VKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVR 165
Query: 206 YDQFTLSAALRAC--TGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKK 263
D F+LS + G E G+Q+H ++LR + D +D FL+++LI+MY K GL
Sbjct: 166 PDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLD--TDSFLKTALIDMYFKFGLSID 223
Query: 264 AQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLT 323
A +VF VE E +VVLW M+ +G +G + +DL+ ++ +F
Sbjct: 224 AWRVF----VEI--EDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTG 277
Query: 324 VISAC------GHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELL 377
+ AC G Q+H V + L+ P + L+ + + G + +A
Sbjct: 278 ALGACSQSENSGFGRQIHCDVV-------KMGLHNDPYVCTSLLSMYSKCGMVGEA---- 326
Query: 378 NQTLYKGMGNCTISMWGALLNA 399
+T++ + + + +W A++ A
Sbjct: 327 -ETVFSCVVDKRLEIWNAMVAA 347
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 183/415 (44%), Gaps = 37/415 (8%)
Query: 7 QFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHD--LHTNLIAAYATCLPKNH-LQTLHNF 63
L C NLS K +HG+++ G + +D + T+L+ Y C ++ +Q +
Sbjct: 65 SLLKACSALTNLSYGKTIHGSVVVLG---WRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 64 FKCMNSTNPLH---FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV 120
+ + + +N +I + + + F M V D ++L ++ S
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSL--SIVVSVMC 179
Query: 121 NDVNF----GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK-NTVC 175
+ NF GKQIH + + + F+ +AL+D+Y K DA VF EI +K N V
Sbjct: 180 KEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVL 239
Query: 176 ANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVL 235
N ++ G+G +G+ L+L +K + + AL AC+ GRQ+H V+
Sbjct: 240 WNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV 299
Query: 236 RTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGR 295
+ + +D ++ +SL+ MY KCG+V +A+ VF V+ R E +W +M+ Y
Sbjct: 300 KM--GLHNDPYVCTSLLSMYSKCGMVGEAETVFSC-VVDKRLE------IWNAMVAAYAE 350
Query: 296 NGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNP--- 352
N +DLF M ++ + PD VIS C G + G +S+ E P
Sbjct: 351 NDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG----KSVHAELFKRPIQS 406
Query: 353 GPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
S L+ L + G A+ ++K M + WG+L++ G +
Sbjct: 407 TSTIESALLTLYSKCGCDPDAY-----LVFKSMEEKDMVAWGSLISGLCKNGKFK 456
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 113/274 (41%), Gaps = 49/274 (17%)
Query: 209 FTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF 268
FT + L+AC+ L+ + G+ +H V+ D F+ +SL+ MY KCG + A QVF
Sbjct: 61 FTFPSLLKACSALTNLSYGKTIHGSVV--VLGWRYDPFIATSLVNMYVKCGFLDYAVQVF 118
Query: 269 KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC 328
+RDV +W SM+ Y + ++KE + F+ ML G+RPD + V+S
Sbjct: 119 DGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVM 178
Query: 329 GHTG--------QVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELL--- 377
G Q+H G S+ + L + L+D+ + G AW +
Sbjct: 179 CKEGNFRREEGKQIH-GFMLRNSLDTDSFLK------TALIDMYFKFGLSIDAWRVFVEI 231
Query: 378 ----NQTLYK-------GMGNCTISM-----------------WGALLNACVDCGNIELG 409
N L+ G G C S+ + L AC N G
Sbjct: 232 EDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFG 291
Query: 410 KLAGQRALELDPHNAG-ICILLSNLYARFGMWDE 442
+ +++ HN +C L ++Y++ GM E
Sbjct: 292 RQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGE 325
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 218 bits (554), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 138/518 (26%), Positives = 252/518 (48%), Gaps = 71/518 (13%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATC---------LPKNHLQ 58
L QC TK+L K +H +L TG L +LI Y C + HL+
Sbjct: 52 LLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR 111
Query: 59 TLHNF-------------------FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMH 99
L+++ F M + + +N ++ + + G AL +
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFR 171
Query: 100 TNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVK 159
+ + + ++ LTA + + +Q H V G+ S+V + +++D Y+K ++
Sbjct: 172 RSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQME 231
Query: 160 DAALVFDEI-------------------------------PEKNTVCANALLSGYGEAGL 188
A FDE+ PEKN V AL++GY G
Sbjct: 232 SAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGS 291
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
+ L+L RKM L +K +QFT S+ L A ++++ G+++H Y++RT ++ + +
Sbjct: 292 GNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT--NVRPNAIVI 349
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
SSLI+MY K G ++ +++VF++ + D V W +M+ ++G + + + +
Sbjct: 350 SSLIDMYSKSGSLEASERVFRI------CDDKHDCVFWNTMISALAQHGLGHKALRMLDD 403
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAG 368
M++ ++P+ + +++AC H+G V G+++FESM+ + + P EHY+CL+DLL RAG
Sbjct: 404 MIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAG 463
Query: 369 ELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICI 428
++ + + ++ + +W A+L C GN ELGK A ++LDP ++ I
Sbjct: 464 CFKELMRKIEEMPFEPDKH----IWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYI 519
Query: 429 LLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
LLS++YA G W+ + LR V+K+R + K+ SW+++
Sbjct: 520 LLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEI 557
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 115/275 (41%), Gaps = 54/275 (19%)
Query: 169 PEKNTVC-ANALLSGYGEAGLWAQGLELVRKMPV--LRLKYDQFTLSAALRACTGLSAVE 225
P K +C A + LS + +Q + + + +RL +D L++ L+ C +++
Sbjct: 6 PRKRPICVAQSFLSKHATKAELSQAVSRLESLTQQGIRLPFD--LLASLLQQCGDTKSLK 63
Query: 226 LGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS----- 280
G+ +H + L+ T + L + LI MY KCG A +VF D + RN S
Sbjct: 64 QGKWIHRH-LKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVF--DQMHLRNLYSWNNMV 120
Query: 281 ---------------------RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGI 319
RDVV W +M+ Y ++G E + +KE GI+ +
Sbjct: 121 SGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNEF 180
Query: 320 AFLTVISACGHTGQV------HAGVKYFESMSNEFKLNPGPEHYSC-LVDLLCRAGELQK 372
+F +++AC + Q+ H V +SN SC ++D + G+++
Sbjct: 181 SFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVV--------LSCSIIDAYAKCGQMES 232
Query: 373 AWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
A ++ K I +W L++ G++E
Sbjct: 233 AKRCFDEMTVK-----DIHIWTTLISGYAKLGDME 262
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/439 (31%), Positives = 229/439 (52%), Gaps = 20/439 (4%)
Query: 29 LRTGTLFFLHD-LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGF 87
L T T + HD + T I+ Y+ C ++ F+ + + +N +I + G
Sbjct: 246 LATKTGCYSHDYVLTGFISLYSKC---GKIKMGSALFREFRKPDIVAYNAMIHGYTSNGE 302
Query: 88 PFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSA 147
L+L+ F + + L + L S + S + + IH + K + S V +A
Sbjct: 303 TELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTA 359
Query: 148 LVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYD 207
L +YSKL+ ++ A +FDE PEK+ NA++SGY + GL + L R+M +
Sbjct: 360 LTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPN 419
Query: 208 QFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQV 267
T++ L AC L A+ LG+ +H V T D ES +++ ++LI MY KCG + +A+++
Sbjct: 420 PVTITCILSACAQLGALSLGKWVHDLVRST--DFESSIYVSTALIGMYAKCGSIAEARRL 477
Query: 268 FKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISA 327
F L + +NE V W +M+ YG +G+ +E +++F EML GI P + FL V+ A
Sbjct: 478 FDL--MTKKNE-----VTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYA 530
Query: 328 CGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGN 387
C H G V G + F SM + + P +HY+C+VD+L RAG LQ+A + + + + G+
Sbjct: 531 CSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFI-EAMSIEPGS 589
Query: 388 CTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLR 447
S+W LL AC + L + ++ ELDP N G +LLSN+++ + + +R
Sbjct: 590 ---SVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVR 646
Query: 448 VVIKERGLRKDVGCSWVQV 466
K+R L K G + +++
Sbjct: 647 QTAKKRKLAKAPGYTLIEI 665
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 174/379 (45%), Gaps = 32/379 (8%)
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMH-TNNVPLDTYALCSTLTASSRV 120
+ F + + FNV++ F P +L+ F+ + + ++ ++ ++A+S
Sbjct: 73 DIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGF 132
Query: 121 NDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALL 180
D G+ IH G S + +GS +V +Y K V+DA VFD +PEK+T+ N ++
Sbjct: 133 RDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMI 192
Query: 181 SGYGEAGLWAQGLELVRKM---PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRT 237
SGY + ++ + +++ R + RL D TL L A L + LG Q+HS +T
Sbjct: 193 SGYRKNEMYVESIQVFRDLINESCTRL--DTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 238 ---THDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYG 294
+HD ++ + I +Y KCG +K +F R R D+V + +M+ Y
Sbjct: 251 GCYSHD-----YVLTGFISLYSKCGKIKMGSALF-------REFRKPDIVAYNAMIHGYT 298
Query: 295 RNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGP 354
NG+ + + LFKE++ G R ++++ GH ++A Y + + F +
Sbjct: 299 SNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYAIHGY--CLKSNFLSHASV 356
Query: 355 EHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE--LGKLA 412
+ L + + E++ A +L +++ K + + W A+++ G E +
Sbjct: 357 S--TALTTVYSKLNEIESARKLFDESPEKSLPS-----WNAMISGYTQNGLTEDAISLFR 409
Query: 413 GQRALELDPHNAGICILLS 431
+ E P+ I +LS
Sbjct: 410 EMQKSEFSPNPVTITCILS 428
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 250/466 (53%), Gaps = 21/466 (4%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNH-LQTLHN 62
++I + C N + +HG ++R G F +DL +L+ + C K+ + N
Sbjct: 165 TLITLVSACTKLSNSRLGRCVHGFVIRRG---FSNDL--SLVNSLLNCYAKSRAFKEAVN 219
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
FK + + + ++ +I+ + + G AL F+ M + + + L A + +D
Sbjct: 220 LFKMIAEKDVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHD 279
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ G++ H + G + V V +ALVD+Y K S ++A VF IP K+ V AL+SG
Sbjct: 280 LEQGRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISG 339
Query: 183 YGEAGLWAQGLELVRKMPVLR-LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
+ G+ + +E M + + D + L +C+ L +E + HSYV++ D
Sbjct: 340 FTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFD- 398
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
S+ F+ +SL+E+Y +CG + A +VF +G+ + D V+WTS++ YG +GK +
Sbjct: 399 -SNPFIGASLVELYSRCGSLGNASKVF--NGIALK-----DTVVWTSLITGYGIHGKGTK 450
Query: 302 VIDLFKEMLEEG-IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL 360
++ F M++ ++P+ + FL+++SAC H G +H G++ F+ M N+++L P EHY+ L
Sbjct: 451 ALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVL 510
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELD 420
VDLL R G+L A E+ + + + T + G LL AC N E+ + ++ EL+
Sbjct: 511 VDLLGRVGDLDTAIEITKRMPF----SPTPQILGTLLGACRIHQNGEMAETVAKKLFELE 566
Query: 421 PHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
++AG +L+SN+Y G W+ + LR +K+RG++K + S +++
Sbjct: 567 SNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEI 612
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 167/345 (48%), Gaps = 20/345 (5%)
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV 120
F M + +N ++ + R+ L FS M + D + L L A +
Sbjct: 14 RQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGEL 73
Query: 121 NDVNFGKQIHAHVGK-LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANAL 179
+VN+G+ IH V K + S ++VGS+L+ +Y K + +A +FDE+ + + V +++
Sbjct: 74 REVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTWSSM 133
Query: 180 LSGYGEAGLWAQGLELVRKMPVLR-LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTT 238
+SG+ + G Q +E R+M + + D+ TL + ACT LS LGR +H +V+R
Sbjct: 134 VSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIR-- 191
Query: 239 HDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGK 298
+D+ L +SL+ Y K K+A +FK+ +DV+ W++++ Y +NG
Sbjct: 192 RGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA-------EKDVISWSTVIACYVQNGA 244
Query: 299 YKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEH-- 356
E + +F +M+++G P+ L V+ AC + G K ++E + G E
Sbjct: 245 AAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRK-----THELAIRKGLETEV 299
Query: 357 --YSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
+ LVD+ + ++A+ + ++ K + + + G LN
Sbjct: 300 KVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNG 344
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 182/372 (48%), Gaps = 15/372 (4%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L C + ++ + +HG + + TL + ++LI Y C + F +
Sbjct: 67 LKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKC---GRMIEALRMFDELE 123
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFM-HTNNVPLDTYALCSTLTASSRVNDVNFGK 127
+ + ++ ++S F + G P+ A+ F M ++V D L + ++A +++++ G+
Sbjct: 124 KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
+H V + G+S+ + + ++L++ Y+K + K+A +F I EK+ + + +++ Y + G
Sbjct: 184 CVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNG 243
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
A+ L + M + + T+ L+AC +E GR+ H +R +E++V +
Sbjct: 244 AAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRK--GLETEVKV 301
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
++L++MY KC ++A VF SR R +DVV W +++ + NG I+ F
Sbjct: 302 STALVDMYMKCFSPEEAYAVF------SRIPR-KDVVSWVALISGFTLNGMAHRSIEEFS 354
Query: 308 EM-LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
M LE RPD I + V+ +C G + K F S ++ + P + LV+L R
Sbjct: 355 IMLLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSR 413
Query: 367 AGELQKAWELLN 378
G L A ++ N
Sbjct: 414 CGSLGNASKVFN 425
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 91/176 (51%), Gaps = 9/176 (5%)
Query: 154 KLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSA 213
K SS DA +F E+ +++ N LL W + L M K D FTL
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 214 ALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGV 273
AL+AC L V G +H +V + + SD+++ SSLI MY KCG + +A ++F D +
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDV-TLGSDLYVGSSLIYMYIKCGRMIEALRMF--DEL 122
Query: 274 ESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM-LEEGIRPDGIAFLTVISAC 328
E D+V W+SM+ + +NG + ++ F+ M + + PD + +T++SAC
Sbjct: 123 E-----KPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSAC 173
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 224/432 (51%), Gaps = 20/432 (4%)
Query: 39 DLHT--NLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFS 96
DLHT +LI Y+ C ++ F + + + N +I+ + + A+ F
Sbjct: 563 DLHTGSSLIDMYSKC---GIIKDARKVFSSLPEWSVVSMNALIAGYSQNNLE-EAVVLFQ 618
Query: 97 FMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS-VFVGSALVDLYSKL 155
M T V + + A + + G Q H + K G+SS ++G +L+ +Y
Sbjct: 619 EMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNS 678
Query: 156 SSVKDAALVFDEIPE-KNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAA 214
+ +A +F E+ K+ V ++SG+ + G + + L+ ++M + DQ T
Sbjct: 679 RGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTV 738
Query: 215 LRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVE 274
LR C+ LS++ GR +HS + HD+ D ++LI+MY KCG +K + QVF E
Sbjct: 739 LRVCSVLSSLREGRAIHSLIFHLAHDL--DELTSNTLIDMYAKCGDMKGSSQVFD----E 792
Query: 275 SRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQV 334
R R +VV W S++ Y +NG ++ + +F M + I PD I FL V++AC H G+V
Sbjct: 793 MR--RRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKV 850
Query: 335 HAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWG 394
G K FE M ++ + +H +C+VDLL R G LQ+A + + K +W
Sbjct: 851 SDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKP----DARLWS 906
Query: 395 ALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERG 454
+LL AC G+ G+++ ++ +EL+P N+ +LLSN+YA G W++ LR V+++RG
Sbjct: 907 SLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRG 966
Query: 455 LRKDVGCSWVQV 466
++K G SW+ V
Sbjct: 967 VKKVPGYSWIDV 978
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 173/340 (50%), Gaps = 14/340 (4%)
Query: 41 HTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHT 100
H + T + L+ F M+S + + +NV+IS ++G +A+ F M
Sbjct: 261 HLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRK 320
Query: 101 NNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKD 160
++V L S L+A V +++ G +HA KLG +S+++VGS+LV +YSK ++
Sbjct: 321 SSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEA 380
Query: 161 AALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTG 220
AA VF+ + EKN V NA++ GY G + +EL M D FT ++ L C
Sbjct: 381 AAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAA 440
Query: 221 LSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNER- 279
+E+G Q HS +++ + ++F+ ++L++MY KCG ++ A+Q+F ER
Sbjct: 441 SHDLEMGSQFHSIIIKKK--LAKNLFVGNALVDMYAKCGALEDARQIF---------ERM 489
Query: 280 -SRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGV 338
RD V W +++G Y ++ E DLFK M GI DG + + AC H ++ G
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG- 548
Query: 339 KYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLN 378
K +S + L+ S L+D+ + G ++ A ++ +
Sbjct: 549 KQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 169/364 (46%), Gaps = 16/364 (4%)
Query: 44 LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNV 103
L+ YA C L+ F+ M + + +N II ++ + A F M+ +
Sbjct: 469 LVDMYAKC---GALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGI 525
Query: 104 PLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAAL 163
D L STL A + V+ + GKQ+H K G + GS+L+D+YSK +KDA
Sbjct: 526 VSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Query: 164 VFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSA 223
VF +PE + V NAL++GY + L + + L ++M + + T + + AC +
Sbjct: 586 VFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPES 644
Query: 224 VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
+ LG Q H + + E + +L SL+ MY + +A +F S + +
Sbjct: 645 LTLGTQFHGQITKRGFSSEGE-YLGISLLGMYMNSRGMTEACALF------SELSSPKSI 697
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFES 343
VLWT M+ + +NG Y+E + +KEM +G+ PD F+TV+ C + G + S
Sbjct: 698 VLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREG-RAIHS 756
Query: 344 MSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDC 403
+ + + L+D+ + G+++ + ++ ++ + + W +L+N
Sbjct: 757 LIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRS----NVVSWNSLINGYAKN 812
Query: 404 GNIE 407
G E
Sbjct: 813 GYAE 816
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 150/314 (47%), Gaps = 28/314 (8%)
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ GK +H+ LG S +G+A+VDLY+K + V A FD + EK+ N++LS
Sbjct: 76 LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSM 134
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
Y G + L + ++ ++FT S L C + VE GRQ+H +++ +E
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG--LE 192
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFK--LDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
+ + +L++MY KC + A++VF+ +D + V WT + Y + G +
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWIVDP---------NTVCWTCLFSGYVKAGLPE 243
Query: 301 EVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL 360
E + +F+ M +EG RPD +AF+TVI+ G++ F MS +P ++ +
Sbjct: 244 EAVLVFERMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVM 298
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELD 420
+ + G A E + K T S G++L+A N++LG + A++L
Sbjct: 299 ISGHGKRGCETVAIEYFF-NMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 357
Query: 421 PHNAGICILLSNLY 434
L SN+Y
Sbjct: 358 --------LASNIY 363
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 122/299 (40%), Gaps = 48/299 (16%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMH 99
L ++ YA C ++ + +F + + +N ++S + G P L +F +
Sbjct: 97 LGNAIVDLYAKCAQVSYAEKQFDFLE----KDVTAWNSMLSMYSSIGKPGKVLRSFVSLF 152
Query: 100 TNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVK 159
N + + + L+ +R +V FG+QIH + K+G + + G ALVD+Y+K +
Sbjct: 153 ENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRIS 212
Query: 160 DAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACT 219
DA VF+ I + NTVC L SGY +AGL + + + +M + D
Sbjct: 213 DARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAF-------- 264
Query: 220 GLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNER 279
++I Y + G +K A+ +F
Sbjct: 265 -----------------------------VTVINTYIRLGKLKDARLLFG-------EMS 288
Query: 280 SRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGV 338
S DVV W M+ +G+ G I+ F M + ++ +V+SA G + G+
Sbjct: 289 SPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGL 347
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 131/440 (29%), Positives = 241/440 (54%), Gaps = 34/440 (7%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFS--F 97
L+ ++ AY++ LP H + +FF+ M + + N I K P+L+ +AFS
Sbjct: 90 LYAAVLTAYSSSLPL-HASSAFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLS-SAFSTPL 147
Query: 98 MHTN--NVPLDTYALCSTL---TASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLY 152
+HT+ Y + T + +S V+ + +Q+ + + +V +A++ Y
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSE----RNVVSWTAMLSGY 203
Query: 153 SKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM---PVLRLKYDQF 209
++ + +A +F+++PE++ NA+L+ + GL+ + + L R+M P +R ++
Sbjct: 204 ARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRP--NEV 261
Query: 210 TLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFK 269
T+ L AC ++L + +H++ R D+ SDVF+ +SL+++YGKCG +++A VFK
Sbjct: 262 TVVCVLSACAQTGTLQLAKGIHAFAYR--RDLSSDVFVSNSLVDLYGKCGNLEEASSVFK 319
Query: 270 LDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLE---EGIRPDGIAFLTVIS 326
+ +S + W SM+ + +G+ +E I +F+EM++ I+PD I F+ +++
Sbjct: 320 MASKKS-------LTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLN 372
Query: 327 ACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMG 386
AC H G V G YF+ M+N F + P EHY CL+DLL RAG +A E+++ K
Sbjct: 373 ACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKA-- 430
Query: 387 NCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHL 446
++WG+LLNAC G+++L ++A + + L+P+N G +++NLY G W+E
Sbjct: 431 --DEAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRA 488
Query: 447 RVVIKERGLRKDVGCSWVQV 466
R +IK + K G S +++
Sbjct: 489 RKMIKHQNAYKPPGWSRIEI 508
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/418 (29%), Positives = 227/418 (54%), Gaps = 18/418 (4%)
Query: 40 LHTNLIAAYATC--LPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSF 97
+ + L++ YA C + + LQ F M + + +N +I + + + F
Sbjct: 150 VRSALLSLYARCGKMEEARLQ-----FDSMKERDLVSWNAMIDGYTANACADTSFSLFQL 204
Query: 98 MHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSS 157
M T D + S L AS V + ++H KLG+ S + +LV+ Y K S
Sbjct: 205 MLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNAYVKCGS 264
Query: 158 VKDAALVFDEIPEKNTVCANALLSGYGEAG-LWAQGLELVRKMPVLRLKYDQFTLSAALR 216
+ +A + + +++ + AL++G+ + + ++ + M ++ K D+ +S+ L+
Sbjct: 265 LANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLK 324
Query: 217 ACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESR 276
CT +++V +GRQ+H + L+++ I DV L +SLI+MY K G ++ A F+
Sbjct: 325 ICTTIASVTIGRQIHGFALKSSQ-IRFDVALGNSLIDMYAKSGEIEDAVLAFE------- 376
Query: 277 NERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHA 336
+ +DV WTS++ YGR+G +++ IDL+ M E I+P+ + FL+++SAC HTGQ
Sbjct: 377 EMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTEL 436
Query: 337 GVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGAL 396
G K +++M N+ + EH SC++D+L R+G L++A+ L+ +G+ + + S WGA
Sbjct: 437 GWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSK--EGIVSLSSSTWGAF 494
Query: 397 LNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERG 454
L+AC GN++L K+A + L ++P I L+++YA G WD + R ++KE G
Sbjct: 495 LDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESG 552
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 171/387 (44%), Gaps = 23/387 (5%)
Query: 24 LHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFC 83
+HGN + G L L LI Y L + ++ F ++ + + + +IS F
Sbjct: 34 IHGNSITNGFCSNLQ-LKDMLIDLY---LKQGDVKHARKLFDRISKRDVVSWTAMISRFS 89
Query: 84 RKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVF 143
R G+ AL F MH +V + + S L + + + G QIH V K + ++
Sbjct: 90 RCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGNCAGNLI 149
Query: 144 VGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR 203
V SAL+ LY++ +++A L FD + E++ V NA++ GY L + M
Sbjct: 150 VRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQLMLTEG 209
Query: 204 LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKK 263
K D FT + LRA + +E+ +LH ++ S + SL+ Y KCG +
Sbjct: 210 KKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALI--RSLVNAYVKCGSLAN 267
Query: 264 AQQVFKLDGVESRNERSRDVVLWTSML-GVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFL 322
A ++ + + RD++ T+++ G +N + D+FK+M+ + D +
Sbjct: 268 AWKLHE-------GTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVS 320
Query: 323 TVISACGHTGQVHAG--VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQT 380
+++ C V G + F S++ + + + L+D+ ++GE++ A
Sbjct: 321 SMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGN--SLIDMYAKSGEIEDA-----VL 373
Query: 381 LYKGMGNCTISMWGALLNACVDCGNIE 407
++ M + W +L+ GN E
Sbjct: 374 AFEEMKEKDVRSWTSLIAGYGRHGNFE 400
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 134/410 (32%), Positives = 220/410 (53%), Gaps = 19/410 (4%)
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV 120
H F+ + + + +N +IS++ + A++ + MH V D + S L S
Sbjct: 343 HKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSL-- 400
Query: 121 NDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALL 180
D++ + + A + K G SS + + +AL+ YSK ++ A L+F+ KN + NA++
Sbjct: 401 -DLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAII 459
Query: 181 SGYGEAGLWAQGLELVRKM--PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTT 238
SG+ G +GLE + +R+ D +TLS L C S++ LG Q H+YVLR
Sbjct: 460 SGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLR-- 517
Query: 239 HDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS-RDVVLWTSMLGVYGRNG 297
H + + ++LI MY +CG ++ + +VF N+ S +DVV W S++ Y R+G
Sbjct: 518 HGQFKETLIGNALINMYSQCGTIQNSLEVF--------NQMSEKDVVSWNSLISAYSRHG 569
Query: 298 KYKEVIDLFKEMLEEG-IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEH 356
+ + ++ +K M +EG + PD F V+SAC H G V G++ F SM + +H
Sbjct: 570 EGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDH 629
Query: 357 YSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRA 416
+SCLVDLL RAG L +A E L + K +G+ + +W AL +AC G+++LGK+ +
Sbjct: 630 FSCLVDLLGRAGHLDEA-ESLVKISEKTIGS-RVDVWWALFSACAAHGDLKLGKMVAKLL 687
Query: 417 LELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+E + + + + LSN+YA GMW E R I G K GCSW+++
Sbjct: 688 MEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 146/306 (47%), Gaps = 49/306 (16%)
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALTAFSFMHT-NNVPLDTYALCSTLTASSRVNDVNFG 126
NST L+ N ++ R G AL F+ +H + D Y++ +T + + D FG
Sbjct: 17 NSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFG 76
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYS-------------------------------KL 155
Q+H + + G V + L+ LY KL
Sbjct: 77 GQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKL 136
Query: 156 SSVKDAALVFDEIPEKNTVCA-NALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAA 214
++ A VFD++PE++ V NA+++G E+G +EL R+M L +++D+F +
Sbjct: 137 GDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATI 196
Query: 215 LRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVE 274
L C +++ G+Q+HS V++ I S V ++LI MY C +V A VF+ V
Sbjct: 197 LSMC-DYGSLDFGKQVHSLVIKAGFFIASSVV--NALITMYFNCQVVVDACLVFEETDVA 253
Query: 275 SRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC-----G 329
R++ + +VV+ G+ G K E + +F++MLE +RP + F++V+ +C G
Sbjct: 254 VRDQVTFNVVI----DGLAGF--KRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAMG 307
Query: 330 HTGQVH 335
H QVH
Sbjct: 308 H--QVH 311
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 140/306 (45%), Gaps = 44/306 (14%)
Query: 114 LTASSRVNDVNF------------GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
L AS R D+ F G Q+H K G+ V +A + +YS A
Sbjct: 283 LEASLRPTDLTFVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAA 342
Query: 162 ALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGL 221
VF+ + EK+ V N ++S Y +A L + + ++M ++ +K D+FT + L L
Sbjct: 343 HKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL 402
Query: 222 SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS- 280
+E+ + + +++ + S + + ++LI Y K G ++KA +F ERS
Sbjct: 403 DVLEM---VQACIIK--FGLSSKIEISNALISAYSKNGQIEKADLLF---------ERSL 448
Query: 281 -RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIR--PDGIAFLTVISACGHTGQVHAG 337
++++ W +++ + NG E ++ F +LE +R PD T++S C T + G
Sbjct: 449 RKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLG 508
Query: 338 VKYFESMSNEFKLNPGPEHYS----CLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMW 393
S ++ + L G + L+++ + G +Q + E+ NQ M + W
Sbjct: 509 -----SQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQ-----MSEKDVVSW 558
Query: 394 GALLNA 399
+L++A
Sbjct: 559 NSLISA 564
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 241/449 (53%), Gaps = 27/449 (6%)
Query: 22 KKLHGNLLRTGTLFFLHDLHT--NLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVII 79
K++HG + + G F D++ +L+ Y C + F M + + + II
Sbjct: 126 KQIHGIVTKMG---FYDDIYVQNSLVHFYGVC---GESRNACKVFGEMPVRDVVSWTGII 179
Query: 80 SNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWS 139
+ F R G AL FS M L TY L +S RV ++ GK IH + K
Sbjct: 180 TGFTRTGLYKEALDTFSKMDVEP-NLATYV--CVLVSSGRVGCLSLGKGIHGLILKRASL 236
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
S+ G+AL+D+Y K + DA VF E+ +K+ V N+++SG + ++L M
Sbjct: 237 ISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLM 296
Query: 200 PVLR-LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC 258
+K D L++ L AC L AV+ GR +H Y+L T I+ D + +++++MY KC
Sbjct: 297 QTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYIL--TAGIKWDTHIGTAIVDMYAKC 354
Query: 259 GLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDG 318
G ++ A ++F +G+ RS++V W ++LG +G E + F+EM++ G +P+
Sbjct: 355 GYIETALEIF--NGI-----RSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNL 407
Query: 319 IAFLTVISACGHTGQVHAGVKYFESM-SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELL 377
+ FL ++AC HTG V G +YF M S E+ L P EHY C++DLLCRAG L +A EL+
Sbjct: 408 VTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELV 467
Query: 378 NQTLYKGMGNCTISMWGALLNACVDCGNI-ELGKLAGQRALELDPHNAGICILLSNLYAR 436
K + + GA+L+AC + G + EL K L+++ ++G+ +LLSN++A
Sbjct: 468 KAMPVKP----DVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAA 523
Query: 437 FGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
WD++ +R ++K +G+ K G S+++
Sbjct: 524 NRRWDDVARIRRLMKVKGISKVPGSSYIE 552
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 158/343 (46%), Gaps = 30/343 (8%)
Query: 60 LHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSR 119
LH+ ++S +N ++S++ P + + A+ +N D + A +
Sbjct: 62 LHSIRSVLSS---FSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGK 118
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANAL 179
+ + GKQIH V K+G+ ++V ++LV Y ++A VF E+P ++ V +
Sbjct: 119 FSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGI 178
Query: 180 LSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTH 239
++G+ GL+ + L+ KM V + + T L + + + LG+ +H +L+
Sbjct: 179 ITGFTRTGLYKEALDTFSKMDV---EPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRAS 235
Query: 240 DIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKY 299
I + ++LI+MY KC + A +VF +D V W SM+ +
Sbjct: 236 LISLET--GNALIDMYVKCEQLSDAMRVFG-------ELEKKDKVSWNSMISGLVHCERS 286
Query: 300 KEVIDLFKEM-LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPE--- 355
KE IDLF M GI+PDG +V+SAC G V G +E+ L G +
Sbjct: 287 KEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHG-----RWVHEYILTAGIKWDT 341
Query: 356 HY-SCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
H + +VD+ + G ++ A E+ N G+ + + W ALL
Sbjct: 342 HIGTAIVDMYAKCGYIETALEIFN-----GIRSKNVFTWNALL 379
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 133/297 (44%), Gaps = 15/297 (5%)
Query: 18 LSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNV 77
LS K +HG +L+ +L L + LI Y C L F + + + +N
Sbjct: 220 LSLGKGIHGLILKRASLISL-ETGNALIDMYVKC---EQLSDAMRVFGELEKKDKVSWNS 275
Query: 78 IISNFCRKGFPFLALTAFSFMHTNN-VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKL 136
+IS A+ FS M T++ + D + L S L+A + + V+ G+ +H ++
Sbjct: 276 MISGLVHCERSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA 335
Query: 137 GWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELV 196
G +G+A+VD+Y+K ++ A +F+ I KN NALL G G + L
Sbjct: 336 GIKWDTHIGTAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYF 395
Query: 197 RKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYG 256
+M L K + T AAL AC V+ GR+ + +++ + +I++
Sbjct: 396 EEMVKLGFKPNLVTFLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLC 455
Query: 257 KCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKY----KEVIDLFKEM 309
+ GL+ +A ++ K V+ DV + ++L G KE++D F ++
Sbjct: 456 RAGLLDEALELVKAMPVKP------DVRICGAILSACKNRGTLMELPKEILDSFLDI 506
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 145/469 (30%), Positives = 242/469 (51%), Gaps = 30/469 (6%)
Query: 5 IIQFLHQCHVTKNLSAIKKLHGNLLRTG----TLFFLHDLHTNLIAAYATCLPKNHLQTL 60
I++ L C+ K L +K+H +++ G F H L A + +H Q L
Sbjct: 8 IVRMLQGCNSMKKL---RKIHSHVIINGLQHHPSIFNHLLR---FCAVSVTGSLSHAQLL 61
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPL-DTYALCSTLTASSR 119
+ F ST+ +N +I F P ++ ++ M ++V D + L + R
Sbjct: 62 FDHFDSDPSTSD--WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCER 119
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANAL 179
+ + +IH V + G+ V ++LV YS SV+ A+ VFDE+P ++ V N +
Sbjct: 120 IKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVM 179
Query: 180 LSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTH 239
+ + GL Q L + ++M + D +TL A L +C +SA+ +G LH R
Sbjct: 180 ICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLH----RIAC 235
Query: 240 DI--ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNG 297
DI ES VF+ ++LI+MY KCG ++ A VF R RDV+ W SM+ YG +G
Sbjct: 236 DIRCESCVFVSNALIDMYAKCGSLENAIGVFN-------GMRKRDVLTWNSMIIGYGVHG 288
Query: 298 KYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY 357
E I F++M+ G+RP+ I FL ++ C H G V GV++FE MS++F L P +HY
Sbjct: 289 HGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHY 348
Query: 358 SCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRAL 417
C+VDL RAG+L+ + E+ +Y + +W LL +C N+ELG++A ++ +
Sbjct: 349 GCMVDLYGRAGQLENSLEM----IYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLV 404
Query: 418 ELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+L+ NAG +L++++Y+ +R +I+ L+ G SW+++
Sbjct: 405 QLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEI 453
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 213/365 (58%), Gaps = 15/365 (4%)
Query: 102 NVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
V +TYA+ L + + GK+IHA + +G++ + ++ L+ LY+ ++ A
Sbjct: 105 QVEPETYAVL--LQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTA 162
Query: 162 ALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGL 221
++F + ++ + NA++SGY + GL +GL + M R+ DQ+T ++ RAC+ L
Sbjct: 163 GILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSAL 222
Query: 222 SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR 281
+E G++ H+ +++ I+S++ + S+L++MY KC +VF D + +RN
Sbjct: 223 DRLEHGKRAHAVMIKRC--IKSNIIVDSALVDMYFKCSSFSDGHRVF--DQLSTRN---- 274
Query: 282 DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYF 341
V+ WTS++ YG +GK EV+ F++M EEG RP+ + FL V++AC H G V G ++F
Sbjct: 275 -VITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHF 333
Query: 342 ESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACV 401
SM ++ + P +HY+ +VD L RAG LQ+A+E + ++ K +WG+LL AC
Sbjct: 334 YSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHP----PVWGSLLGACR 389
Query: 402 DCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGC 461
GN++L +LA + LELDP N G ++ +N YA G+ + +R ++ G++KD G
Sbjct: 390 IHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGY 449
Query: 462 SWVQV 466
S +++
Sbjct: 450 SQIEL 454
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 155/348 (44%), Gaps = 15/348 (4%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHD-LHTNLIAAYATCLPKNHLQTLHNFFKC 66
L +C K + K++H + G F L++ L L+ YA LQT F+
Sbjct: 114 LLQECKQRKEYTKGKRIHAQMFVVG--FALNEYLKVKLLILYAL---SGDLQTAGILFRS 168
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
+ + + +N +IS + +KG L + M N + D Y S A S ++ + G
Sbjct: 169 LKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHG 228
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
K+ HA + K S++ V SALVD+Y K SS D VFD++ +N + +L+SGYG
Sbjct: 229 KRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYH 288
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
G ++ L+ KM + + T L AC V+ G + H Y ++ + IE +
Sbjct: 289 GKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWE-HFYSMKRDYGIEPEGQ 347
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
+++++ G+ G +++A + ++ +W S+LG +G K +++L
Sbjct: 348 HYAAMVDTLGRAGRLQEAYEFV------MKSPCKEHPPVWGSLLGACRIHGNVK-LLELA 400
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNE-FKLNPG 353
E +G ++ + G A K M N K +PG
Sbjct: 401 ATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPG 448
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 216 bits (549), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 133/406 (32%), Positives = 219/406 (53%), Gaps = 16/406 (3%)
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV 120
F M + + + +IS + P A+ + M ++V D + + L+A + +
Sbjct: 352 EKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATL 411
Query: 121 NDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALL 180
D++ G ++H K S V V + L+++YSK + A +F IP KN + +++
Sbjct: 412 GDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSII 471
Query: 181 SGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD 240
+G + L +R+M + L+ + TL+AAL AC + A+ G+++H++VLRT
Sbjct: 472 AGLRLNNRCFEALIFLRQMK-MTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG-- 528
Query: 241 IESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
+ D FL ++L++MY +CG + A F N + +DV W +L Y G+
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNTAWSQF--------NSQKKDVTSWNILLTGYSERGQGS 580
Query: 301 EVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL 360
V++LF M++ +RPD I F++++ C + V G+ YF M ++ + P +HY+C+
Sbjct: 581 MVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKME-DYGVTPNLKHYACV 639
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELD 420
VDLL RAGELQ+A + + + ++WGALLNAC I+LG+L+ Q ELD
Sbjct: 640 VDLLGRAGELQEAHKFIQKMPVTP----DPAVWGALLNACRIHHKIDLGELSAQHIFELD 695
Query: 421 PHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+ G ILL NLYA G W E+ +R ++KE GL D GCSWV+V
Sbjct: 696 KKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEV 741
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 149/277 (53%), Gaps = 10/277 (3%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFM-HTNNVPLDTYALCSTLTASSRVND 122
F M+ N +NV++ + ++G+ A+ + M V D Y L + D
Sbjct: 152 FGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPD 211
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ GK++H HV + G+ + V +AL+ +Y K VK A L+FD +P ++ + NA++SG
Sbjct: 212 LARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISG 271
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
Y E G+ +GLEL M L + D TL++ + AC L LGR +H+YV+ T +
Sbjct: 272 YFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAV- 330
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
D+ + +SL +MY G ++A+++F SR ER +D+V WT+M+ Y N +
Sbjct: 331 -DISVCNSLTQMYLNAGSWREAEKLF------SRMER-KDIVSWTTMISGYEYNFLPDKA 382
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK 339
ID ++ M ++ ++PD I V+SAC G + GV+
Sbjct: 383 IDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVE 419
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 171/372 (45%), Gaps = 19/372 (5%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L C +L+ K++H +++R G + D+ LI Y C +++ F M
Sbjct: 203 LRTCGGIPDLARGKEVHVHVVRYGYELDI-DVVNALITMYVKC---GDVKSARLLFDRMP 258
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
+ + +N +IS + G L F M +V D L S ++A + D G+
Sbjct: 259 RRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRD 318
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGL 188
IHA+V G++ + V ++L +Y S ++A +F + K+ V ++SGY L
Sbjct: 319 IHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFL 378
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
+ ++ R M +K D+ T++A L AC L ++ G +LH ++ + S V +
Sbjct: 379 PDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR--LISYVIVA 436
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
++LI MY KC + KA +F N ++V+ WTS++ N + E + ++
Sbjct: 437 NNLINMYSKCKCIDKALDIF-------HNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQ 489
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY--SCLVDLLCR 366
M + ++P+ I ++AC G + G E ++ + G + + + L+D+ R
Sbjct: 490 M-KMTLQPNAITLTAALAACARIGALMCGK---EIHAHVLRTGVGLDDFLPNALLDMYVR 545
Query: 367 AGELQKAWELLN 378
G + AW N
Sbjct: 546 CGRMNTAWSQFN 557
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 10/200 (5%)
Query: 139 SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRK 198
S V +G+A + ++ + ++ DA VF ++ E+N N L+ GY + G + + + L +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 199 MP-VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGK 257
M V +K D +T LR C G+ + G+++H +V+R ++++ DV ++LI MY K
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVV--NALITMYVK 243
Query: 258 CGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPD 317
CG VK A+ +F R R RD++ W +M+ Y NG E ++LF M + PD
Sbjct: 244 CGDVKSARLLF------DRMPR-RDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPD 296
Query: 318 GIAFLTVISACGHTGQVHAG 337
+ +VISAC G G
Sbjct: 297 LMTLTSVISACELLGDRRLG 316
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 215 bits (547), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 130/448 (29%), Positives = 234/448 (52%), Gaps = 25/448 (5%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNS---TNPLHFNVI 78
K +HG +L+T + + L+ Y L + + FK N + + ++ +
Sbjct: 267 KGVHGQILKTCYVLDPR-VGVGLLQLYT------QLGDMSDAFKVFNEMPKNDVVPWSFM 319
Query: 79 ISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGW 138
I+ FC+ GF A+ F M V + + L S L + G+Q+H V K+G+
Sbjct: 320 IARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGF 379
Query: 139 SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRK 198
++V +AL+D+Y+K + A +F E+ KN V N ++ GY G + + R+
Sbjct: 380 DLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFRE 439
Query: 199 MPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC 258
++ + T S+AL AC L++++LG Q+H ++T + V + +SLI+MY KC
Sbjct: 440 ALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNN--AKKVAVSNSLIDMYAKC 497
Query: 259 GLVKKAQQVFKLDGVESRNE-RSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPD 317
G +K AQ VF NE + DV W +++ Y +G ++ + + M + +P+
Sbjct: 498 GDIKFAQSVF--------NEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPN 549
Query: 318 GIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELL 377
G+ FL V+S C + G + G + FESM + + P EHY+C+V LL R+G+L KA +L+
Sbjct: 550 GLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLI 609
Query: 378 NQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARF 437
Y+ ++ +W A+L+A ++ N E + + + L+++P + +L+SN+YA
Sbjct: 610 EGIPYEP----SVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGA 665
Query: 438 GMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
W + +R +KE G++K+ G SW++
Sbjct: 666 KQWANVASIRKSMKEMGVKKEPGLSWIE 693
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 167/356 (46%), Gaps = 18/356 (5%)
Query: 44 LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNV 103
LI AY+ C + +T+ C + + + I+S + G+ +L S M
Sbjct: 187 LINAYSVCGSVDSARTVFEGILC---KDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGF 243
Query: 104 PLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAAL 163
+ Y + L AS + +F K +H + K + VG L+ LY++L + DA
Sbjct: 244 MPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFK 303
Query: 164 VFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSA 223
VF+E+P+ + V + +++ + + G + ++L +M + ++FTLS+ L C
Sbjct: 304 VFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGKC 363
Query: 224 VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
LG QLH V++ D+ D+++ ++LI++Y KC + A ++F + S+NE
Sbjct: 364 SGLGEQLHGLVVKVGFDL--DIYVSNALIDVYAKCEKMDTAVKLFA--ELSSKNE----- 414
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFES 343
V W +++ Y G+ + +F+E L + + F + + AC + GV+
Sbjct: 415 VSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQ-VHG 473
Query: 344 MSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
++ + + L+D+ + G+++ A Q+++ M ++ W AL++
Sbjct: 474 LAIKTNNAKKVAVSNSLIDMYAKCGDIKFA-----QSVFNEMETIDVASWNALISG 524
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 150/324 (46%), Gaps = 21/324 (6%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCM 67
L +C + + K +H ++L+ G+ L + L A K+ L N F M
Sbjct: 55 MLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDAL----NLFDEM 110
Query: 68 NSTNPLHFNVIISNF-CRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
N + F + + C+ + +S +H L+ + S L ++
Sbjct: 111 PERNNVSFVTLAQGYACQD-----PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEIC 165
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
+H+ + KLG+ S+ FVG+AL++ YS SV A VF+ I K+ V ++S Y E
Sbjct: 166 PWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVEN 225
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
G + L+L+ M + + +T AL+A GL A + + +H +L+T + ++ V
Sbjct: 226 GYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVG 285
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR-DVVLWTSMLGVYGRNGKYKEVIDL 305
+ L+++Y + G + A +VF NE + DVV W+ M+ + +NG E +DL
Sbjct: 286 V--GLLQLYTQLGDMSDAFKVF--------NEMPKNDVVPWSFMIARFCQNGFCNEAVDL 335
Query: 306 FKEMLEEGIRPDGIAFLTVISACG 329
F M E + P+ ++++ C
Sbjct: 336 FIRMREAFVVPNEFTLSSILNGCA 359
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 134/289 (46%), Gaps = 15/289 (5%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTN--LIAAYATCLPKNHLQTLH 61
++ L+ C + K ++LHG +++ G F D++ + LI YA C + T
Sbjct: 350 TLSSILNGCAIGKCSGLGEQLHGLVVKVG---FDLDIYVSNALIDVYAKC---EKMDTAV 403
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
F ++S N + +N +I + G A + F N V + S L A + +
Sbjct: 404 KLFAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLA 463
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
++ G Q+H K + V V ++L+D+Y+K +K A VF+E+ + NAL+S
Sbjct: 464 SMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALIS 523
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
GY GL Q L ++ M K + T L C+ ++ G++ ++R H I
Sbjct: 524 GYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIR-DHGI 582
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSML 290
E + + ++ + G+ G + KA ++ ++G+ V++W +ML
Sbjct: 583 EPCLEHYTCMVRLLGRSGQLDKAMKL--IEGIPYEPS----VMIWRAML 625
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 27/230 (11%)
Query: 105 LDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALV 164
LD++A + L + ND K IH + K G +F + L++ Y K KDA +
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 165 FDEIPEKNTVCANALLSGYG---EAGLWA----QGLELVRKMPVLRLKYDQFTLSAALRA 217
FDE+PE+N V L GY GL++ +G EL + ++ L+
Sbjct: 107 FDEMPERNNVSFVTLAQGYACQDPIGLYSRLHREGHEL-----------NPHVFTSFLKL 155
Query: 218 CTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRN 277
L E+ LHS +++ +D S+ F+ ++LI Y CG V A+ VF +G+
Sbjct: 156 FVSLDKAEICPWLHSPIVKLGYD--SNAFVGAALINAYSVCGSVDSARTVF--EGI---- 207
Query: 278 ERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISA 327
+D+V+W ++ Y NG +++ + L M G P+ F T + A
Sbjct: 208 -LCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKA 256
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 147/475 (30%), Positives = 243/475 (51%), Gaps = 43/475 (9%)
Query: 2 SNSIIQFLHQCHVTKNLSAIKKLHGNLLR----TGTLFFLHDLHTNLIAAYATCLPKNHL 57
S++ L C + +++H +++ TGT+ T LI Y+ HL
Sbjct: 84 SHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTIS-----KTALIDMYS---KYGHL 135
Query: 58 QTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTAS 117
F+ + + + +N ++S F R G AL F+ M+ V + + L S +
Sbjct: 136 VDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTC 195
Query: 118 SRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIP-EKNTVCA 176
+ + + GKQ+HA V G V +G+A++ YS + + +A V++ + + V
Sbjct: 196 ASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVML 254
Query: 177 NALLSG------YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQL 230
N+L+SG Y EA L + R+ P +R+ LS++L C+ S + +G+Q+
Sbjct: 255 NSLISGCIRNRNYKEAFLL-----MSRQRPNVRV------LSSSLAGCSDNSDLWIGKQI 303
Query: 231 HSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSML 290
H LR + SD L + L++MYGKCG + +A+ +F R S+ VV WTSM+
Sbjct: 304 HCVALR--NGFVSDSKLCNGLMDMYGKCGQIVQARTIF-------RAIPSKSVVSWTSMI 354
Query: 291 GVYGRNGKYKEVIDLFKEMLEEG--IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEF 348
Y NG + +++F+EM EEG + P+ + FL VISAC H G V G + F M ++
Sbjct: 355 DAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKY 414
Query: 349 KLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIEL 408
+L PG EHY C +D+L +AGE ++ W L+ + + + ++W A+L+AC ++
Sbjct: 415 RLVPGTEHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTR 474
Query: 409 GKLAGQRAL-ELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCS 462
G+ +R + E P NA I +L+SN YA G WD + LR +K +GL K G S
Sbjct: 475 GEYVARRLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 161/341 (47%), Gaps = 37/341 (10%)
Query: 84 RKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVF 143
R G P L F +H + L ++ L A S ++ G+Q+HA + K G +
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 144 VGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR 203
+AL+D+YSK + D+ VF+ + EK+ V NALLSG+ G + L + M R
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 204 LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKK 263
++ +FTLS+ ++ C L ++ G+Q+H+ V+ T D+ V L +++I Y GL+ +
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDL---VVLGTAMISFYSSVGLINE 237
Query: 264 AQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLT 323
A +V+ V + D V+ S++ RN YKE L RP+ +
Sbjct: 238 AMKVYNSLNVHT------DEVMLNSLISGCIRNRNYKEAFLLMSRQ-----RPNVRVLSS 286
Query: 324 VISACGHTGQVHAG-----VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLN 378
++ C + G V ++ KL G L+D+ + G++ +A
Sbjct: 287 SLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNG------LMDMYGKCGQIVQA----- 335
Query: 379 QTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALEL 419
+T+++ + + ++ W ++++A G+ G +ALE+
Sbjct: 336 RTIFRAIPSKSVVSWTSMIDAYAVNGD-------GVKALEI 369
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 88/181 (48%), Gaps = 15/181 (8%)
Query: 164 VFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSA 223
+FDE+P+++ N+ LS + +G L L ++ T + L AC+ LS
Sbjct: 40 LFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSY 99
Query: 224 VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
E GRQ+H+ +++ E+ +++LI+MY K G + + +VF ES E +D+
Sbjct: 100 PETGRQVHALMIK--QGAETGTISKTALIDMYSKYGHLVDSVRVF-----ESVEE--KDL 150
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG------HTGQVHAG 337
V W ++L + RNGK KE + +F M E + +V+ C QVHA
Sbjct: 151 VSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAM 210
Query: 338 V 338
V
Sbjct: 211 V 211
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 142/497 (28%), Positives = 240/497 (48%), Gaps = 54/497 (10%)
Query: 3 NSIIQFLHQCHVTKNLSAIKKLHGNLLRTG---TLFFLHDLHTNLIAAYATCLPKNHLQT 59
+S+I L C NL+ IK++HG++LR G + + L L L P
Sbjct: 50 SSLISKLDDC---INLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDP-----Y 101
Query: 60 LHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSR 119
+ + NP + +I + +G A+ + M + ++ + L A
Sbjct: 102 ARRVIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGT 161
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTV----- 174
+ D+N G+Q HA +L V+VG+ ++D+Y K S+ A VFDE+PE++ +
Sbjct: 162 MKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTEL 221
Query: 175 -----------CA---------------NALLSGYGEAGLWAQGLELVRKMPVLRLKYDQ 208
CA A+++G+ + + LE +M ++ D+
Sbjct: 222 IAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADE 281
Query: 209 FTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF 268
T++ + AC L A + + ++ + V + S+LI+MY KCG V++A VF
Sbjct: 282 VTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVF 341
Query: 269 KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG-IRPDGIAFLTVISA 327
+ +++V ++SM+ +G+ +E + LF M+ + I+P+ + F+ + A
Sbjct: 342 M-------SMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMA 394
Query: 328 CGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGN 387
C H+G V G + F+SM F + P +HY+C+VDLL R G LQ+A EL+ + G
Sbjct: 395 CSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHG- 453
Query: 388 CTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLR 447
+WGALL AC N E+ ++A + EL+P G ILLSN+YA G W + +R
Sbjct: 454 ---GVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVR 510
Query: 448 VVIKERGLRKDVGCSWV 464
+IKE+GL+K SWV
Sbjct: 511 KLIKEKGLKKTPAVSWV 527
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 137/450 (30%), Positives = 228/450 (50%), Gaps = 25/450 (5%)
Query: 21 IKKLHGNLLRTG---TLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNV 77
+KK+H +LRTG L L NL+ C + F M+ +N
Sbjct: 27 LKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQ-------VFDEMHKPRIFLWNT 79
Query: 78 IISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG 137
+ + R PF +L + M V D + + A S++ D + G +HAHV K G
Sbjct: 80 LFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG 139
Query: 138 WSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVR 197
+ V + LV +Y K + A +F+ + K+ V NA L+ + G A LE
Sbjct: 140 FGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFN 199
Query: 198 KMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGK 257
KM +++D FT+ + L AC L ++E+G +++ + +I+ ++ ++++ ++M+ K
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK--EEIDCNIIVENARLDMHLK 257
Query: 258 CGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPD 317
CG + A+ +F+ + R+VV W++M+ Y NG +E + LF M EG+RP+
Sbjct: 258 CGNTEAARVLFE-------EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPN 310
Query: 318 GIAFLTVISACGHTGQVHAGVKYFESM--SNEFKLNPGPEHYSCLVDLLCRAGELQKAWE 375
+ FL V+SAC H G V+ G +YF M SN+ L P EHY+C+VDLL R+G L++A+E
Sbjct: 311 YVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYE 370
Query: 376 LLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYA 435
+ + + +WGALL AC ++ LG+ +E P +LLSN+YA
Sbjct: 371 FIKKMPVEP----DTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYA 426
Query: 436 RFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
G WD + +R +++ G +K S V+
Sbjct: 427 AAGKWDCVDKVRSKMRKLGTKKVAAYSSVE 456
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 200/365 (54%), Gaps = 15/365 (4%)
Query: 105 LDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALV 164
D Y L S + + D G H K G+ S V++GS+LV LY V++A V
Sbjct: 118 FDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKV 177
Query: 165 FDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAV 224
F+E+PE+N V A++SG+ + L+L KM + +T +A L ACTG A+
Sbjct: 178 FEEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGAL 237
Query: 225 ELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVV 284
GR +H L ++S + + +SLI MY KCG +K A ++F ++DVV
Sbjct: 238 GQGRSVHCQTLHM--GLKSYLHISNSLISMYCKCGDLKDAFRIFD-------QFSNKDVV 288
Query: 285 LWTSMLGVYGRNGKYKEVIDLFKEML-EEGIRPDGIAFLTVISACGHTGQVHAGVKYFES 343
W SM+ Y ++G + I+LF+ M+ + G +PD I +L V+S+C H G V G K+F
Sbjct: 289 SWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNL 348
Query: 344 MSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDC 403
M+ E L P HYSCLVDLL R G LQ+A EL+ K N I WG+LL +C
Sbjct: 349 MA-EHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKP--NSVI--WGSLLFSCRVH 403
Query: 404 GNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSW 463
G++ G A + L L+P A + L+NLYA G W E +R ++K++GL+ + GCSW
Sbjct: 404 GDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSW 463
Query: 464 VQVTS 468
+++ +
Sbjct: 464 IEINN 468
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 134/285 (47%), Gaps = 17/285 (5%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLH--TNLIAAYATCLPKNHLQTLHNFFKC 66
+ C + ++ H L+ G F+ D++ ++L+ Y ++ + F+
Sbjct: 127 VRSCGLNRDFRTGSGFHCLALKGG---FISDVYLGSSLVVLYR---DSGEVENAYKVFEE 180
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
M N + + +IS F ++ + L +S M + + Y + L+A + + G
Sbjct: 181 MPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQG 240
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
+ +H +G S + + ++L+ +Y K +KDA +FD+ K+ V N++++GY +
Sbjct: 241 RSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQH 300
Query: 187 GLWAQGLELVR-KMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
GL Q +EL MP K D T L +C V+ GR+ + L H ++ ++
Sbjct: 301 GLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKF--FNLMAEHGLKPEL 358
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSML 290
S L+++ G+ GL+++A L+ +E+ + V+ W S+L
Sbjct: 359 NHYSCLVDLLGRFGLLQEA-----LELIENMPMKPNSVI-WGSLL 397
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 150/507 (29%), Positives = 234/507 (46%), Gaps = 81/507 (15%)
Query: 2 SNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHT--NLIAAYATCLPKNHLQT 59
S++ + L K+L+ I++ H +L+TG HD + L+A AT +
Sbjct: 36 SSTPVPILSFTERAKSLTEIQQAHAFMLKTG---LFHDTFSASKLVAFAATNPEPKTVSY 92
Query: 60 LHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSR 119
H+ + S N N +I + P +ALT F M V D Y+ L A +
Sbjct: 93 AHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAA 152
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSK------------------------- 154
G+QIH K G + VFV + LV++Y +
Sbjct: 153 FCGFEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSL 212
Query: 155 LSS------VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRL---- 204
LS+ V +A +FDE+ E+N N ++SGY AGL + E+ MPV +
Sbjct: 213 LSAYLEKGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWN 272
Query: 205 ----------------------------KYDQFTLSAALRACTGLSAVELGRQLHSYVLR 236
K D FTL + L AC L ++ G +H Y+ +
Sbjct: 273 AMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDK 332
Query: 237 TTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRN 296
H IE + FL ++L++MY KCG + KA +VF R RDV W S++ +
Sbjct: 333 --HGIEIEGFLATALVDMYSKCGKIDKALEVF-------RATSKRDVSTWNSIISDLSVH 383
Query: 297 GKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEH 356
G K+ +++F EM+ EG +P+GI F+ V+SAC H G + K FE MS+ +++ P EH
Sbjct: 384 GLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEH 443
Query: 357 YSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRA 416
Y C+VDLL R G++++A EL+N+ + + +LL AC G +E + R
Sbjct: 444 YGCMVDLLGRMGKIEEAEELVNEI----PADEASILLESLLGACKRFGQLEQAERIANRL 499
Query: 417 LELDPHNAGICILLSNLYARFGMWDEI 443
LEL+ ++ +SNLYA G W+++
Sbjct: 500 LELNLRDSSGYAQMSNLYASDGRWEKV 526
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/425 (30%), Positives = 233/425 (54%), Gaps = 17/425 (4%)
Query: 43 NLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNN 102
+L YA C L + F + + +NVII+ G+ A++ FS M ++
Sbjct: 310 SLCDMYARC---GFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 103 VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAA 162
D +L S L A ++ ++ G QIH+++ K G+ + + V ++L+ +Y+ S +
Sbjct: 367 FIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCF 426
Query: 163 LVFDEIPEK-NTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGL 221
+F++ ++V N +L+ + + L L + M V + D T+ LR C +
Sbjct: 427 NLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGCVEI 486
Query: 222 SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR 281
S+++LG Q+H Y L+T + + F+++ LI+MY KCG + +A+++F D +++R
Sbjct: 487 SSLKLGSQVHCYSLKT--GLAPEQFIKNGLIDMYAKCGSLGQARRIF--DSMDNR----- 537
Query: 282 DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYF 341
DVV W++++ Y ++G +E + LFKEM GI P+ + F+ V++AC H G V G+K +
Sbjct: 538 DVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLY 597
Query: 342 ESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACV 401
+M E ++P EH SC+VDLL RAG L +A +++ + + +W LL+AC
Sbjct: 598 ATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEP----DVVVWKTLLSACK 653
Query: 402 DCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGC 461
GN+ L + A + L++DP N+ +LL +++A G W+ LR +K+ ++K G
Sbjct: 654 TQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQ 713
Query: 462 SWVQV 466
SW+++
Sbjct: 714 SWIEI 718
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 162/323 (50%), Gaps = 14/323 (4%)
Query: 6 IQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFK 65
I + C +++L+ +K+H ++L + + L+ ++++ Y C L+ F
Sbjct: 71 ISLICACSSSRSLAQGRKIHDHILNSNCKYDT-ILNNHILSMYGKC---GSLRDAREVFD 126
Query: 66 CMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNF 125
M N + + +I+ + + G A+ + M ++ D +A S + A + +DV
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
GKQ+HA V KL SS + +AL+ +Y + + + DA+ VF IP K+ + +++++G+ +
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 186 AGLWAQGLELVRKMPVLRLKY-DQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESD 244
G + L +++M + + +++ ++L+AC+ L + G Q+H +++ ++ +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS--ELAGN 304
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVID 304
SL +MY +CG + A++VF D +E D W ++ NG E +
Sbjct: 305 AIAGCSLCDMYARCGFLNSARRVF--DQIE-----RPDTASWNVIIAGLANNGYADEAVS 357
Query: 305 LFKEMLEEGIRPDGIAFLTVISA 327
+F +M G PD I+ +++ A
Sbjct: 358 VFSQMRSSGFIPDAISLRSLLCA 380
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 130/255 (50%), Gaps = 15/255 (5%)
Query: 79 ISNFCRKGFPFLALTAFSFMHTNN---VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
I++ C+ F AL AF F N+ + L TY S + A S + G++IH H+
Sbjct: 38 INSLCKSNFYREALEAFDFAQKNSSFKIRLRTYI--SLICACSSSRSLAQGRKIHDHILN 95
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLEL 195
+ + ++ +Y K S++DA VFD +PE+N V ++++GY + G A+ + L
Sbjct: 96 SNCKYDTILNNHILSMYGKCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRL 155
Query: 196 VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
KM L DQF + ++AC S V LG+QLH+ V++ + S + Q++LI MY
Sbjct: 156 YLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKL--ESSSHLIAQNALIAMY 213
Query: 256 GKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGI- 314
+ + A +VF G+ +D++ W+S++ + + G E + KEML G+
Sbjct: 214 VRFNQMSDASRVFY--GIP-----MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVF 266
Query: 315 RPDGIAFLTVISACG 329
P+ F + + AC
Sbjct: 267 HPNEYIFGSSLKACS 281
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 175/400 (43%), Gaps = 37/400 (9%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCM 67
+ C + ++ K+LH +++ + L LIA Y + N + F +
Sbjct: 174 IIKACASSSDVGLGKQLHAQVIKLESSSHL-IAQNALIAMY---VRFNQMSDASRVFYGI 229
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALT------AFSFMHTNNVPLDTYALCSTLTASSRVN 121
+ + ++ II+ F + GF F AL+ +F H N Y S+L A S +
Sbjct: 230 PMKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNE-----YIFGSSLKACSSLL 284
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
++G QIH K + + G +L D+Y++ + A VFD+I +T N +++
Sbjct: 285 RPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIA 344
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
G G + + + +M D +L + L A T A+ G Q+HSY+++
Sbjct: 345 GLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKW--GF 402
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
+D+ + +SL+ MY C + +F+ + RN + D V W ++L ++ + E
Sbjct: 403 LADLTVCNSLLTMYTFCSDLYCCFNLFE----DFRN--NADSVSWNTILTACLQHEQPVE 456
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPG--PEHY-- 357
++ LFK ML PD I ++ C + G S + + L G PE +
Sbjct: 457 MLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLG-----SQVHCYSLKTGLAPEQFIK 511
Query: 358 SCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
+ L+D+ + G L +A + ++ M N + W L+
Sbjct: 512 NGLIDMYAKCGSLGQA-----RRIFDSMDNRDVVSWSTLI 546
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/476 (27%), Positives = 243/476 (51%), Gaps = 39/476 (8%)
Query: 12 CHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTN 71
C + K LS +++G +++ +L + I Y C L F M +
Sbjct: 392 CALVKGLSEGLQIYGLAIKS-SLSLDVCVANAAIDMYGKC---QALAEAFRVFDEMRRRD 447
Query: 72 PLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHA 131
+ +N II+ + G + L F M + + D + S L A + + +G +IH+
Sbjct: 448 AVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHS 506
Query: 132 HVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCA--------------- 176
+ K G +S+ VG +L+D+YSK +++A + ++ V
Sbjct: 507 SIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQE 566
Query: 177 -----NALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLH 231
N+++SGY L +M + + D+FT + L C L++ LG+Q+H
Sbjct: 567 MCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIH 626
Query: 232 SYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
+ V++ +++SDV++ S+L++MY KCG + ++ +F+ RD V W +M+
Sbjct: 627 AQVIKK--ELQSDVYICSTLVDMYSKCGDLHDSRLMFE-------KSLRRDFVTWNAMIC 677
Query: 292 VYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLN 351
Y +GK +E I LF+ M+ E I+P+ + F++++ AC H G + G++YF M ++ L+
Sbjct: 678 GYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLD 737
Query: 352 PGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNAC-VDCGNIELGK 410
P HYS +VD+L ++G++++A EL+ + ++ +W LL C + N+E+ +
Sbjct: 738 PQLPHYSNMVDILGKSGKVKRALELIREMPFEA----DDVIWRTLLGVCTIHRNNVEVAE 793
Query: 411 LAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
A L LDP ++ LLSN+YA GMW+++ LR ++ L+K+ GCSWV++
Sbjct: 794 EATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVEL 849
Score = 129 bits (323), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 167/339 (49%), Gaps = 26/339 (7%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYAT----CLPKNHLQTLHNFF 64
L C ++ S ++HG ++R G T+++AA A K +++L F
Sbjct: 187 LKVCSFLEDTSLGMQIHGIVVRVGC-------DTDVVAASALLDMYAKGKRFVESLR-VF 238
Query: 65 KCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVN 124
+ + N + ++ II+ + LAL F M N + S L + + ++++
Sbjct: 239 QGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELR 298
Query: 125 FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYG 184
G Q+HAH K +++ V +A +D+Y+K +++DA ++FD N NA+++GY
Sbjct: 299 LGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS 358
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESD 244
+ + L L ++ L +D+ +LS RAC + + G Q++ ++++ + D
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSL--D 416
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVID 304
V + ++ I+MYGKC + +A +VF R RD V W +++ + +NGK E +
Sbjct: 417 VCVANAAIDMYGKCQALAEAFRVFD-------EMRRRDAVSWNAIIAAHEQNGKGYETLF 469
Query: 305 LFKEMLEEGIRPDGIAFLTVISAC-----GHTGQVHAGV 338
LF ML I PD F +++ AC G+ ++H+ +
Sbjct: 470 LFVSMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSI 508
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 143/287 (49%), Gaps = 9/287 (3%)
Query: 55 NHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTL 114
N + ++FF M + + +N ++S + + G ++ F M + D L
Sbjct: 128 NDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 187
Query: 115 TASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTV 174
S + D + G QIH V ++G + V SAL+D+Y+K ++ VF IPEKN+V
Sbjct: 188 KVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSV 247
Query: 175 CANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYV 234
+A+++G + L + L+ ++M + Q ++ LR+C LS + LG QLH++
Sbjct: 248 SWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHA 307
Query: 235 LRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYG 294
L++ D +D ++++ ++MY KC ++ AQ +F D E+ N +S + +M+ Y
Sbjct: 308 LKS--DFAADGIVRTATLDMYAKCDNMQDAQILF--DNSENLNRQS-----YNAMITGYS 358
Query: 295 RNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYF 341
+ + + LF ++ G+ D I+ V AC + G++ +
Sbjct: 359 QEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIY 405
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 109/251 (43%), Gaps = 46/251 (18%)
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ GKQ HAH+ G+ + FV + L+ +Y+ A++VFD++P ++ V N +++G
Sbjct: 64 LELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMING 123
Query: 183 YGEAGLWAQGLELVRKMPVLR-------------------------------LKYDQFTL 211
Y ++ + MPV +++D T
Sbjct: 124 YSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTF 183
Query: 212 SAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLD 271
+ L+ C+ L LG Q+H V+R D +DV S+L++MY K ++ +VF+
Sbjct: 184 AIILKVCSFLEDTSLGMQIHGIVVRVGCD--TDVVAASALLDMYAKGKRFVESLRVFQ-- 239
Query: 272 GVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHT 331
G+ +N V W++++ +N + FKEM + + +V+ +C
Sbjct: 240 GIPEKNS-----VSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAAL 294
Query: 332 ------GQVHA 336
GQ+HA
Sbjct: 295 SELRLGGQLHA 305
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 93/245 (37%), Gaps = 45/245 (18%)
Query: 211 LSAALRACTGLSAVELGRQLHSY------------------VLRTTHDIES--------- 243
S + C A+ELG+Q H++ V + D S
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 244 --DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
DV + +I Y K + KA F + V RDVV W SML Y +NG+ +
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPV-------RDVVSWNSMLSGYLQNGESLK 163
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
I++F +M EGI DG F ++ C G++ + + S L+
Sbjct: 164 SIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQ-IHGIVVRVGCDTDVVAASALL 222
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDP 421
D+ + ++ +++G+ W A++ CV L LA + E+
Sbjct: 223 DMYAKGKRFVESLR-----VFQGIPEKNSVSWSAIIAGCVQNN---LLSLALKFFKEMQK 274
Query: 422 HNAGI 426
NAG+
Sbjct: 275 VNAGV 279
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 212 bits (540), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 218/411 (53%), Gaps = 14/411 (3%)
Query: 57 LQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTA 116
+++ F + N + + V++ + + F M + LD L + A
Sbjct: 160 MESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKA 219
Query: 117 SSRVNDVNFGKQIHA-HVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVC 175
V GK +H + + S ++ ++++D+Y K + +A +F+ ++N V
Sbjct: 220 CGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVM 279
Query: 176 ANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVL 235
L+SG+ + + +L R+M + +Q TL+A L +C+ L ++ G+ +H Y++
Sbjct: 280 WTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMI 339
Query: 236 RTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGR 295
R + IE D +S I+MY +CG ++ A+ VF + R+V+ W+SM+ +G
Sbjct: 340 R--NGIEMDAVNFTSFIDMYARCGNIQMARTVFDM-------MPERNVISWSSMINAFGI 390
Query: 296 NGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPE 355
NG ++E +D F +M + + P+ + F++++SAC H+G V G K FESM+ ++ + P E
Sbjct: 391 NGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEE 450
Query: 356 HYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQR 415
HY+C+VDLL RAGE+ +A ++ K M S WGALL+AC ++L ++
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNMPVKPMA----SAWGALLSACRIHKEVDLAGEIAEK 506
Query: 416 ALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
L ++P + + +LLSN+YA GMW+ + +R + +G RK VG S +V
Sbjct: 507 LLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEV 557
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 155/299 (51%), Gaps = 22/299 (7%)
Query: 105 LDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALV 164
+D++ L + A + + G IH K G +V +LV++Y++L +++ A V
Sbjct: 107 VDSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKV 166
Query: 165 FDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR---LKYDQFTLSAALRACTGL 221
FDEIP +N+V L+ GY + +++ E+ R ++R L D TL ++AC +
Sbjct: 167 FDEIPVRNSVLWGVLMKGYLK---YSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNV 223
Query: 222 SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR 281
A ++G+ +H +R + +SD +LQ+S+I+MY KC L+ A+++F+ R
Sbjct: 224 FAGKVGKCVHGVSIRRSFIDQSD-YLQASIIDMYVKCRLLDNARKLFE-------TSVDR 275
Query: 282 DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYF 341
+VV+WT+++ + + + E DLF++ML E I P+ ++ +C G + G
Sbjct: 276 NVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVH 335
Query: 342 ESM-SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
M N +++ +++ +D+ R G +Q A +T++ M + W +++NA
Sbjct: 336 GYMIRNGIEMD--AVNFTSFIDMYARCGNIQMA-----RTVFDMMPERNVISWSSMINA 387
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 144/296 (48%), Gaps = 22/296 (7%)
Query: 114 LTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIP--EK 171
LT S+ +N +Q+HA V G+ V +GS+L + Y + + + A F+ IP ++
Sbjct: 11 LTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKR 70
Query: 172 NTVCANALLSGYGEAGL--WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQ 229
N N +LSGY ++ ++ L L +M D F L A++AC GL +E G
Sbjct: 71 NRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENGIL 130
Query: 230 LHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSM 289
+H ++ + ++ D ++ SL+EMY + G ++ AQ+VF D + RN VLW +
Sbjct: 131 IHGLAMK--NGLDKDDYVAPSLVEMYAQLGTMESAQKVF--DEIPVRNS-----VLWGVL 181
Query: 290 LGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHT--GQVHAGVKYFESMSNE 347
+ Y + K EV LF M + G+ D + + ++ ACG+ G+V V + S+
Sbjct: 182 MKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGKVGKCV-HGVSIRRS 240
Query: 348 FKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDC 403
F ++ + ++D+ + L A +L ++ + + MW L++ C
Sbjct: 241 F-IDQSDYLQASIIDMYVKCRLLDNARKLFETSVDR-----NVVMWTTLISGFAKC 290
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 111/245 (45%), Gaps = 6/245 (2%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
K +HG +R + L ++I Y C L F+ N + + +IS
Sbjct: 230 KCVHGVSIRRSFIDQSDYLQASIIDMYVKC---RLLDNARKLFETSVDRNVVMWTTLISG 286
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
F + A F M ++ + L + L + S + + GK +H ++ + G
Sbjct: 287 FAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMD 346
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV 201
++ +D+Y++ +++ A VFD +PE+N + +++++ +G GL+ + L+ KM
Sbjct: 347 AVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKS 406
Query: 202 LRLKYDQFTLSAALRACTGLSAVELG-RQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGL 260
+ + T + L AC+ V+ G +Q S + + + + + ++++ G+ G
Sbjct: 407 QNVVPNSVTFVSLLSACSHSGNVKEGWKQFES--MTRDYGVVPEEEHYACMVDLLGRAGE 464
Query: 261 VKKAQ 265
+ +A+
Sbjct: 465 IGEAK 469
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/460 (28%), Positives = 229/460 (49%), Gaps = 19/460 (4%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTN-LIAAYATCLPKNHLQTLHNFFKC 66
+ C K++ +K+++G ++ G F N ++ + C + F
Sbjct: 129 LVEACIRLKSIRCVKRVYGFMMSNG--FEPEQYMMNRILLMHVKC---GMIIDARRLFDE 183
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
+ N + IIS F G A F M +T+ L AS+ + + G
Sbjct: 184 IPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVG 243
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
KQ+H KLG + FV L+D+YSK ++DA F+ +PEK TV N +++GY
Sbjct: 244 KQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALH 303
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
G + L L+ M + DQFTLS +R T L+ +EL +Q H+ ++R + ES++
Sbjct: 304 GYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIR--NGFESEIV 361
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
++L++ Y K G V A+ VF D + +N ++ W +++G Y +G+ + + LF
Sbjct: 362 ANTALVDFYSKWGRVDTARYVF--DKLPRKN-----IISWNALMGGYANHGRGTDAVKLF 414
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
++M+ + P+ + FL V+SAC ++G G + F SMS + P HY+C+++LL R
Sbjct: 415 EKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGR 474
Query: 367 AGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGI 426
G L +A + + K T++MW ALLNAC N+ELG++ ++ + P G
Sbjct: 475 DGLLDEAIAFIRRAPLK----TTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGN 530
Query: 427 CILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+++ N+Y G E + ++ +GL C+WV+V
Sbjct: 531 YVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEV 570
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 143/450 (31%), Positives = 238/450 (52%), Gaps = 18/450 (4%)
Query: 17 NLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFN 76
NL A +LH +++ G L + LI Y+ C N + F M+ + + +
Sbjct: 401 NLLAGMELHAYVIKHGWDSNLQ-VGNTLIDMYSKC---NLTCYMGRAFLRMHDKDLISWT 456
Query: 77 VIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKL 136
+I+ + + AL F + + +D L S L ASS + + K+IH H+ +
Sbjct: 457 TVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRK 516
Query: 137 GWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELV 196
G +V + + LVD+Y K ++ A VF+ I K+ V +++S G ++ +EL
Sbjct: 517 GLLDTV-IQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELF 575
Query: 197 RKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYG 256
R+M L D L L A LSA+ GR++H Y+LR +E + + ++++MY
Sbjct: 576 RRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAV--AVVDMYA 633
Query: 257 KCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRP 316
CG ++ A+ VF R ER + ++ +TSM+ YG +G K ++LF +M E + P
Sbjct: 634 CCGDLQSAKAVF------DRIER-KGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSP 686
Query: 317 DGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWEL 376
D I+FL ++ AC H G + G + + M +E++L P PEHY CLVD+L RA + +A+E
Sbjct: 687 DHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEF 746
Query: 377 LNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYAR 436
+ + T +W ALL AC E+G++A QR LEL+P N G +L+SN++A
Sbjct: 747 VKMMKTEP----TAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAE 802
Query: 437 FGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
G W+++ +R +K G+ K GCSW+++
Sbjct: 803 QGRWNDVEKVRAKMKASGMEKHPGCSWIEM 832
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 174/333 (52%), Gaps = 14/333 (4%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L C + +S ++LH + +T F L L L+ Y C L F M
Sbjct: 87 LELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKC---GSLDDAEKVFDEMP 143
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
+N +I + G P AL + M VPL + + L A +++ D+ G +
Sbjct: 144 DRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSE 203
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK-NTVCANALLSGYGEAG 187
+H+ + KLG+ S+ F+ +ALV +Y+K + A +FD EK + V N++LS Y +G
Sbjct: 204 LHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG 263
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLR-TTHDIESDVF 246
+ LEL R+M + + +T+ +AL AC G S +LG+++H+ VL+ +TH S+++
Sbjct: 264 KSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHS--SELY 321
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
+ ++LI MY +CG + +A+++ R + DVV W S++ Y +N YKE ++ F
Sbjct: 322 VCNALIAMYTRCGKMPQAERIL-------RQMNNADVVTWNSLIKGYVQNLMYKEALEFF 374
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK 339
+M+ G + D ++ ++I+A G + AG++
Sbjct: 375 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGME 407
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 164/323 (50%), Gaps = 13/323 (4%)
Query: 2 SNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLH 61
S +I+ L C K++H ++L++ T + LIA Y C +
Sbjct: 284 SYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRC---GKMPQAE 340
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
+ MN+ + + +N +I + + AL FS M D ++ S + AS R++
Sbjct: 341 RILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLS 400
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
++ G ++HA+V K GW S++ VG+ L+D+YSK + F + +K+ + +++
Sbjct: 401 NLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIA 460
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
GY + + LEL R + R++ D+ L + LRA + L ++ + +++H ++LR
Sbjct: 461 GYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-- 518
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
D +Q+ L+++YGKC + A +VF+ + + +DVV WTSM+ NG E
Sbjct: 519 -LDTVIQNELVDVYGKCRNMGYATRVFE-------SIKGKDVVSWTSMISSSALNGNESE 570
Query: 302 VIDLFKEMLEEGIRPDGIAFLTV 324
++LF+ M+E G+ D +A L +
Sbjct: 571 AVELFRRMVETGLSADSVALLCI 593
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 211 bits (537), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 225/451 (49%), Gaps = 19/451 (4%)
Query: 21 IKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIIS 80
++++H LLRT + H L + +P++ + F + +N T H N +I
Sbjct: 27 LRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLS-HCNTMIR 85
Query: 81 NFCRKGFPFLALTAFSFMHTNN-VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWS 139
F P F + N+ +P + + L + D+ G QIH + G+
Sbjct: 86 AFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFL 145
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
S + + L+DLYS + DA VFDEIP+++TV N L S Y L L KM
Sbjct: 146 SDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKM 205
Query: 200 PVLR---LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYG 256
+K D T AL+AC L A++ G+Q+H ++ + + + L ++L+ MY
Sbjct: 206 KNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFI--DENGLSGALNLSNTLVSMYS 263
Query: 257 KCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRP 316
+CG + KA QVF R R+VV WT+++ NG KE I+ F EML+ GI P
Sbjct: 264 RCGSMDKAYQVFY-------GMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISP 316
Query: 317 DGIAFLTVISACGHTGQVHAGVKYFESM-SNEFKLNPGPEHYSCLVDLLCRAGELQKAWE 375
+ ++SAC H+G V G+ +F+ M S EFK+ P HY C+VDLL RA L KA+
Sbjct: 317 EEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYS 376
Query: 376 LLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYA 435
L+ K ++W LL AC G++ELG+ +EL AG +LL N Y+
Sbjct: 377 LIKSMEMKPDS----TIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYS 432
Query: 436 RFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
G W+++ LR ++KE+ + GCS +++
Sbjct: 433 TVGKWEKVTELRSLMKEKRIHTKPGCSAIEL 463
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 211 bits (537), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 141/480 (29%), Positives = 235/480 (48%), Gaps = 48/480 (10%)
Query: 21 IKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIIS 80
++++H L GTL H L + + A A K +L + N +I
Sbjct: 22 VRQIHAKLYVDGTLKDDH-LVGHFVKAVALSDHK-YLDYANQILDRSEKPTLFALNSMIR 79
Query: 81 NFCRKGFPFLALTAFSFMHT--NNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGW 138
C+ P + + + + N++ D Y + + A + + G Q+H + G+
Sbjct: 80 AHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRGF 139
Query: 139 SSSVFVGSALVDLYSKLSSVKDAALVFDEIP----------------------------- 169
+ V + L+ LY++L + VF+ IP
Sbjct: 140 DNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFEG 199
Query: 170 --EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELG 227
E++ + NA++SGY + G + L + M + +K + + + L ACT L A++ G
Sbjct: 200 MPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQG 259
Query: 228 RQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWT 287
R HSY+ R I+ V L ++L+++Y KCG ++KA +VF G+E +N V W+
Sbjct: 260 RWAHSYIERNK--IKITVRLATTLVDLYAKCGDMEKAMEVFW--GMEEKN-----VYTWS 310
Query: 288 SMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNE 347
S L NG ++ ++LF M ++G+ P+ + F++V+ C G V G ++F+SM NE
Sbjct: 311 SALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNE 370
Query: 348 FKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
F + P EHY CLVDL RAG L+ A ++ Q K ++W +LL+A N+E
Sbjct: 371 FGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHA----AVWSSLLHASRMYKNLE 426
Query: 408 LGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQVT 467
LG LA ++ LEL+ N G +LLSN+YA WD + H+R +K +G+RK GCS ++V
Sbjct: 427 LGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVN 486
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 232/441 (52%), Gaps = 38/441 (8%)
Query: 52 LPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALC 111
+ K + FF MN + + +N II+ + + G A F +V T A+
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWT-AMV 288
Query: 112 STLTASSRV-------------NDVNFGKQIHAHVG--KLGWSSSVF---------VGSA 147
S + V N+V++ + +V ++ + +F +
Sbjct: 289 SGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNT 348
Query: 148 LVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYD 207
++ Y++ + +A +FD++P+++ V A+++GY ++G + L L +M + +
Sbjct: 349 MITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLN 408
Query: 208 QFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQV 267
+ + S+AL C + A+ELG+QLH +++ + E+ F+ ++L+ MY KCG +++A +
Sbjct: 409 RSSFSSALSTCADVVALELGKQLHGRLVKGGY--ETGCFVGNALLLMYCKCGSIEEANDL 466
Query: 268 FKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISA 327
FK +D+V W +M+ Y R+G + + F+ M EG++PD + V+SA
Sbjct: 467 FK-------EMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSA 519
Query: 328 CGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGN 387
C HTG V G +YF +M+ ++ + P +HY+C+VDLL RAG L+ A L+ ++
Sbjct: 520 CSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP--- 576
Query: 388 CTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLR 447
++WG LL A GN EL + A + ++P N+G+ +LLSNLYA G W ++G LR
Sbjct: 577 -DAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLR 635
Query: 448 VVIKERGLRKDVGCSWVQVTS 468
V ++++G++K G SW+++ +
Sbjct: 636 VRMRDKGVKKVPGYSWIEIQN 656
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 117/249 (46%), Gaps = 10/249 (4%)
Query: 44 LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNV 103
+I YA C + N F M +P+ + +I+ + + G F AL F M
Sbjct: 349 MITGYAQC---GKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG 405
Query: 104 PLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAAL 163
L+ + S L+ + V + GKQ+H + K G+ + FVG+AL+ +Y K S+++A
Sbjct: 406 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 164 VFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSA 223
+F E+ K+ V N +++GY G L M LK D T+ A L AC+
Sbjct: 466 LFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGL 525
Query: 224 VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
V+ GRQ + Y + + + + + ++++ G+ GL++ A + K E D
Sbjct: 526 VDKGRQ-YFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEP------DA 578
Query: 284 VLWTSMLGV 292
+W ++LG
Sbjct: 579 AIWGTLLGA 587
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 150/375 (40%), Gaps = 60/375 (16%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
FK M + + +N +IS + R G LA F M ++ + + V +
Sbjct: 87 FKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDL------VSWNVMIKGYVRNR 140
Query: 124 NFGK-----QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANA 178
N GK +I W++ ++ Y++ V DA VFD +PEKN V NA
Sbjct: 141 NLGKARELFEIMPERDVCSWNT-------MLSGYAQNGCVDDARSVFDRMPEKNDVSWNA 193
Query: 179 LLSGY------GEAGLWAQGLE-------------LVRKMPVLRLKYDQFTLSAALRACT 219
LLS Y EA + + E V+K ++ + QF S +R
Sbjct: 194 LLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEAR--QFFDSMNVRDVV 251
Query: 220 GLSAVELGRQLHSYVLRTTHDIES----DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVES 275
+ + G + + DVF ++++ Y + +V++A+++F D +
Sbjct: 252 SWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELF--DKMPE 309
Query: 276 RNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVH 335
RNE V W +ML Y + + + +LF M + + T+I+ G++
Sbjct: 310 RNE-----VSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKIS 360
Query: 336 AGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGA 395
F+ M P ++ ++ ++G +A L Q +G G S + +
Sbjct: 361 EAKNLFDKMPKR-----DPVSWAAMIAGYSQSGHSFEALRLFVQMEREG-GRLNRSSFSS 414
Query: 396 LLNACVDCGNIELGK 410
L+ C D +ELGK
Sbjct: 415 ALSTCADVVALELGK 429
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/451 (29%), Positives = 231/451 (51%), Gaps = 33/451 (7%)
Query: 24 LHGNLLRTGTLFFLHDL--HTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
LH +++ G F HD+ T+L++ Y+ L H F + + + + + S
Sbjct: 133 LHSLVVKCG---FNHDVAAMTSLLSIYSG---SGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
+ G A+ F M V D+Y + L+A V D++ G+ I ++ ++ +
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKN 246
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV 201
FV + LV+LY+K ++ A VFD + EK+ V + ++ GY +G+EL +M
Sbjct: 247 SFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQ 306
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
LK DQF++ L +C L A++LG S + R H+ +++F+ ++LI+MY KCG +
Sbjct: 307 ENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDR--HEFLTNLFMANALIDMYAKCGAM 364
Query: 262 KKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAF 321
+ +VFK + +D+V+ + + +NG K +F + + GI PDG F
Sbjct: 365 ARGFEVFK-------EMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTF 417
Query: 322 LTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTL 381
L ++ C H G + G+++F ++S + L EHY C+VDL RAG L A+ L+
Sbjct: 418 LGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLI---- 473
Query: 382 YKGMGNCTISM------WGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYA 435
C + M WGALL+ C + +L + + + L+P NAG + LSN+Y+
Sbjct: 474 ------CDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYS 527
Query: 436 RFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
G WDE +R ++ ++G++K G SW+++
Sbjct: 528 VGGRWDEAAEVRDMMNKKGMKKIPGYSWIEL 558
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 186/388 (47%), Gaps = 45/388 (11%)
Query: 27 NLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKG 86
NLL TLFF ++ L+ ++ T P N +N +I+ F
Sbjct: 49 NLLLKRTLFFRQTKYSYLLFSH-TQFP-----------------NIFLYNSLINGFVNNH 90
Query: 87 FPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGS 146
L F + + + L + L A +R + G +H+ V K G++ V +
Sbjct: 91 LFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMT 150
Query: 147 ALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKY 206
+L+ +YS + DA +FDEIP+++ V AL SGY +G + ++L +KM + +K
Sbjct: 151 SLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKP 210
Query: 207 DQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQ 266
D + + L AC + ++ G + Y+ +++ + F++++L+ +Y KCG ++KA+
Sbjct: 211 DSYFIVQVLSACVHVGDLDSGEWIVKYM--EEMEMQKNSFVRTTLVNLYAKCGKMEKARS 268
Query: 267 VFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVIS 326
VF +S E +D+V W++M+ Y N KE I+LF +ML+E ++PD + + +S
Sbjct: 269 VF-----DSMVE--KDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLS 321
Query: 327 ACGHTGQVHAG------VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQT 380
+C G + G + E ++N F N L+D+ + G + + +E
Sbjct: 322 SCASLGALDLGEWGISLIDRHEFLTNLFMAN-------ALIDMYAKCGAMARGFE----- 369
Query: 381 LYKGMGNCTISMWGALLNACVDCGNIEL 408
++K M I + A ++ G+++L
Sbjct: 370 VFKEMKEKDIVIMNAAISGLAKNGHVKL 397
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 144/305 (47%), Gaps = 21/305 (6%)
Query: 98 MHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSS 157
M VP T + T S VN KQIH + F+ + L+
Sbjct: 1 MSIVTVPSATSKVQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQ 60
Query: 158 VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRA 217
K + L+F N N+L++G+ L+ + L+L + L FT L+A
Sbjct: 61 TKYSYLLFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKA 120
Query: 218 CTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRN 277
CT S+ +LG LHS V++ + DV +SL+ +Y G + A ++F D + R+
Sbjct: 121 CTRASSRKLGIDLHSLVVKCGFN--HDVAAMTSLLSIYSGSGRLNDAHKLF--DEIPDRS 176
Query: 278 ERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
VV WT++ Y +G+++E IDLFK+M+E G++PD + V+SAC H G + +G
Sbjct: 177 -----VVTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSG 231
Query: 338 ---VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWG 394
VKY E M E + N + LV+L + G+++KA ++++ M I W
Sbjct: 232 EWIVKYMEEM--EMQKNSFVR--TTLVNLYAKCGKMEKA-----RSVFDSMVEKDIVTWS 282
Query: 395 ALLNA 399
++
Sbjct: 283 TMIQG 287
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 129/393 (32%), Positives = 211/393 (53%), Gaps = 17/393 (4%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+I + +KG A+ AF M V + Y S L + + D+ GK IH +
Sbjct: 235 ITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMV 294
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
K G+ S++ ++L+ +Y + S V D+ VF I N V +L+SG + G L
Sbjct: 295 KSGFESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALI 354
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
RKM +K + FTLS+ALR C+ L+ E GRQ+H V T + + D + S LI++
Sbjct: 355 EFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIV--TKYGFDRDKYAGSGLIDL 412
Query: 255 YGKCGLVKKAQQVFK-LDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
YGKCG A+ VF L V DV+ +M+ Y +NG +E +DLF+ M+ G
Sbjct: 413 YGKCGCSDMARLVFDTLSEV--------DVISLNTMIYSYAQNGFGREALDLFERMINLG 464
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
++P+ + L+V+ AC ++ V G + F+S + K+ +HY+C+VDLL RAG L++A
Sbjct: 465 LQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIMLTNDHYACMVDLLGRAGRLEEA 523
Query: 374 WELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNL 433
L + + N + +W LL+AC +E+ + ++ LE++P + G IL+SNL
Sbjct: 524 EMLTTEVI-----NPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNL 578
Query: 434 YARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
YA G W+ + ++ +K+ L+K+ SWV++
Sbjct: 579 YASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEI 611
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 178/363 (49%), Gaps = 16/363 (4%)
Query: 7 QFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKC 66
Q L QC +++S IK + ++L++G F + L+ A C + F
Sbjct: 70 QLLRQCIDERSISGIKTIQAHMLKSG--FPAEISGSKLVDASLKC---GDIDYARQVFDG 124
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
M+ + + +N +I+ + A+ + M TNNV D Y L S A S ++
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 127 KQIHAHVGKLGWS-SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
++ H LG S+VFVGSALVD+Y K ++A LV D + EK+ V AL+ GY +
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQ 244
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
G + ++ + M V +++ +++T ++ L +C L + G+ +H ++++ ES +
Sbjct: 245 KGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG--FESAL 302
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
Q+SL+ MY +C LV + +VFK +E N+ V WTS++ +NG+ + +
Sbjct: 303 ASQTSLLTMYLRCSLVDDSLRVFKC--IEYPNQ-----VSWTSLISGLVQNGREEMALIE 355
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLC 365
F++M+ + I+P+ + + C + G + + ++ + S L+DL
Sbjct: 356 FRKMMRDSIKPNSFTLSSALRGCSNLAMFEEG-RQIHGIVTKYGFDRDKYAGSGLIDLYG 414
Query: 366 RAG 368
+ G
Sbjct: 415 KCG 417
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 163/348 (46%), Gaps = 19/348 (5%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATC-LPKNHLQTLHNFFKCM 67
L C K++ K +HG ++++G L T+L+ Y C L + L+ FKC+
Sbjct: 274 LISCGNLKDIGNGKLIHGLMVKSGFESALAS-QTSLLTMYLRCSLVDDSLRV----FKCI 328
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGK 127
N + + +IS + G +AL F M +++ +++ L S L S + G+
Sbjct: 329 EYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGR 388
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
QIH V K G+ + GS L+DLY K A LVFD + E + + N ++ Y + G
Sbjct: 389 QIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNG 448
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
+ L+L +M L L+ + T+ + L AC VE G +L + + +D +
Sbjct: 449 FGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHY- 507
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
+ ++++ G+ G +++A+ + E N D+VLW ++L + K + + +
Sbjct: 508 -ACMVDLLGRAGRLEEAEML----TTEVINP---DLVLWRTLLSACKVHRKVEMAERITR 559
Query: 308 EMLEEGIRPDGIAFLTVISAC-GHTGQVHAGVKYFESMSN-EFKLNPG 353
++LE I P L ++S TG+ + ++ M + + K NP
Sbjct: 560 KILE--IEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPA 605
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 250/498 (50%), Gaps = 51/498 (10%)
Query: 2 SNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTN-LIAAYATCLPKNHLQTL 60
S +++ + C ++L +K++ + +G ++DL + L+ Y C N +
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSG--IEVNDLMVSALVDMYMKC---NAIDVA 290
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV 120
F ++N N + SN+ R+G AL F+ M + V D ++ S +++ S++
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 121 NDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEI------------ 168
++ +GK H +V + G+ S + +AL+D+Y K A +FD +
Sbjct: 351 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
Query: 169 -------------------PEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR-LKYDQ 208
PEKN V N ++SG + L+ + +E+ M + D
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 209 FTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF 268
T+ + AC L A++L + ++ Y+ + + I+ DV L ++L++M+ +CG + A +F
Sbjct: 471 VTMMSIASACGHLGALDLAKWIYYYIEK--NGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 269 KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC 328
+ +RDV WT+ +G G + I+LF +M+E+G++PDG+AF+ ++AC
Sbjct: 529 N-------SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 329 GHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNC 388
H G V G + F SM ++P HY C+VDLL RAG L++A +L+ +
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP---- 637
Query: 389 TISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRV 448
+W +LL AC GN+E+ A ++ L P G +LLSN+YA G W+++ +R+
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697
Query: 449 VIKERGLRKDVGCSWVQV 466
+KE+GLRK G S +Q+
Sbjct: 698 SMKEKGLRKPPGTSSIQI 715
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 180/398 (45%), Gaps = 26/398 (6%)
Query: 16 KNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNP-LH 74
K + +K H +L + G + + T L+A + L F+ S
Sbjct: 43 KTIDELKMFHRSLTKQGLDNDVSTI-TKLVARSCELGTRESLSFAKEVFENSESYGTCFM 101
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N +I + G A+ F M + + D Y L+A ++ G QIH +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
K+G++ +FV ++LV Y++ + A VFDE+ E+N V +++ GY ++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 195 L-VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIE 253
L R + + + T+ + AC L +E G ++++++ + IE + + S+L++
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSG--IEVNDLMVSALVD 279
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
MY KC + A+++F G + ++ L +M Y R G +E + +F M++ G
Sbjct: 280 MYMKCNAIDVAKRLFDEYG-------ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY----SCLVDLLCRAGE 369
+RPD I+ L+ IS+C + G + + L G E + + L+D+ +
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWG-----KSCHGYVLRNGFESWDNICNALIDMYMKCHR 387
Query: 370 LQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
A+ + ++ M N T+ W +++ V+ G ++
Sbjct: 388 QDTAFRIFDR-----MSNKTVVTWNSIVAGYVENGEVD 420
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 182/409 (44%), Gaps = 62/409 (15%)
Query: 23 KLHGNLLRTGTLFFLHDL--HTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIIS 80
++HG +++ G + DL +L+ YA C L + F M+ N + + +I
Sbjct: 155 QIHGLIVKMG---YAKDLFVQNSLVHFYAEC---GELDSARKVFDEMSERNVVSWTSMIC 208
Query: 81 NFCRKGFPFLALTAFSFM-HTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWS 139
+ R+ F A+ F M V ++ + ++A +++ D+ G++++A + G
Sbjct: 209 GYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
+ + SALVD+Y K +++ A +FDE N NA+ S Y GL + L + M
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
Query: 200 PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG 259
++ D+ ++ +A+ +C+ L + G+ H YVLR + ES + ++LI+MY KC
Sbjct: 329 MDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR--NGFESWDNICNALIDMYMKCH 386
Query: 260 LVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGK--------------------- 298
A ++F ++ VV W S++ Y NG+
Sbjct: 387 RQDTAFRIFD-------RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 299 ----------YKEVIDLFKEML-EEGIRPDGIAFLTVISACGHTGQVHAG---VKYFESM 344
++E I++F M +EG+ DG+ +++ SACGH G + Y E
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 345 SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMW 393
+ + G + LVD+ R G+ + A + N + N +S W
Sbjct: 500 GIQLDVRLG----TTLVDMFSRCGDPESAMSIFNS-----LTNRDVSAW 539
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 209 bits (531), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 140/498 (28%), Positives = 250/498 (50%), Gaps = 51/498 (10%)
Query: 2 SNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTN-LIAAYATCLPKNHLQTL 60
S +++ + C ++L +K++ + +G ++DL + L+ Y C N +
Sbjct: 236 SVTMVCVISACAKLEDLETGEKVYAFIRNSG--IEVNDLMVSALVDMYMKC---NAIDVA 290
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV 120
F ++N N + SN+ R+G AL F+ M + V D ++ S +++ S++
Sbjct: 291 KRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQL 350
Query: 121 NDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEI------------ 168
++ +GK H +V + G+ S + +AL+D+Y K A +FD +
Sbjct: 351 RNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIV 410
Query: 169 -------------------PEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR-LKYDQ 208
PEKN V N ++SG + L+ + +E+ M + D
Sbjct: 411 AGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADG 470
Query: 209 FTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF 268
T+ + AC L A++L + ++ Y+ + + I+ DV L ++L++M+ +CG + A +F
Sbjct: 471 VTMMSIASACGHLGALDLAKWIYYYIEK--NGIQLDVRLGTTLVDMFSRCGDPESAMSIF 528
Query: 269 KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC 328
+ +RDV WT+ +G G + I+LF +M+E+G++PDG+AF+ ++AC
Sbjct: 529 N-------SLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTAC 581
Query: 329 GHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNC 388
H G V G + F SM ++P HY C+VDLL RAG L++A +L+ +
Sbjct: 582 SHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEP---- 637
Query: 389 TISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRV 448
+W +LL AC GN+E+ A ++ L P G +LLSN+YA G W+++ +R+
Sbjct: 638 NDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRL 697
Query: 449 VIKERGLRKDVGCSWVQV 466
+KE+GLRK G S +Q+
Sbjct: 698 SMKEKGLRKPPGTSSIQI 715
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 180/398 (45%), Gaps = 26/398 (6%)
Query: 16 KNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNP-LH 74
K + +K H +L + G + + T L+A + L F+ S
Sbjct: 43 KTIDELKMFHRSLTKQGLDNDVSTI-TKLVARSCELGTRESLSFAKEVFENSESYGTCFM 101
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N +I + G A+ F M + + D Y L+A ++ G QIH +
Sbjct: 102 YNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIV 161
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
K+G++ +FV ++LV Y++ + A VFDE+ E+N V +++ GY ++
Sbjct: 162 KMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVD 221
Query: 195 L-VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIE 253
L R + + + T+ + AC L +E G ++++++ + IE + + S+L++
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS--GIEVNDLMVSALVD 279
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
MY KC + A+++F G + ++ L +M Y R G +E + +F M++ G
Sbjct: 280 MYMKCNAIDVAKRLFDEYG-------ASNLDLCNAMASNYVRQGLTREALGVFNLMMDSG 332
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY----SCLVDLLCRAGE 369
+RPD I+ L+ IS+C + G + + L G E + + L+D+ +
Sbjct: 333 VRPDRISMLSAISSCSQLRNILWG-----KSCHGYVLRNGFESWDNICNALIDMYMKCHR 387
Query: 370 LQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
A+ + ++ M N T+ W +++ V+ G ++
Sbjct: 388 QDTAFRIFDR-----MSNKTVVTWNSIVAGYVENGEVD 420
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/409 (24%), Positives = 182/409 (44%), Gaps = 62/409 (15%)
Query: 23 KLHGNLLRTGTLFFLHDL--HTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIIS 80
++HG +++ G + DL +L+ YA C L + F M+ N + + +I
Sbjct: 155 QIHGLIVKMG---YAKDLFVQNSLVHFYAEC---GELDSARKVFDEMSERNVVSWTSMIC 208
Query: 81 NFCRKGFPFLALTAFSFM-HTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWS 139
+ R+ F A+ F M V ++ + ++A +++ D+ G++++A + G
Sbjct: 209 GYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIE 268
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
+ + SALVD+Y K +++ A +FDE N NA+ S Y GL + L + M
Sbjct: 269 VNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLM 328
Query: 200 PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG 259
++ D+ ++ +A+ +C+ L + G+ H YVLR + ES + ++LI+MY KC
Sbjct: 329 MDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR--NGFESWDNICNALIDMYMKCH 386
Query: 260 LVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGK--------------------- 298
A ++F ++ VV W S++ Y NG+
Sbjct: 387 RQDTAFRIFD-------RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 299 ----------YKEVIDLFKEML-EEGIRPDGIAFLTVISACGHTGQVHAG---VKYFESM 344
++E I++F M +EG+ DG+ +++ SACGH G + Y E
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 345 SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMW 393
+ + G + LVD+ R G+ + A + N + N +S W
Sbjct: 500 GIQLDVRLG----TTLVDMFSRCGDPESAMSIFNS-----LTNRDVSAW 539
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 208 bits (530), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 220/421 (52%), Gaps = 15/421 (3%)
Query: 45 IAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVP 104
I+ C ++T F + + +N ++S + A++ F M N+
Sbjct: 354 ISVLGACFRSGDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLK 413
Query: 105 LDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALV 164
D L L++ +R+ + GKQIH V + S + + S L+ +YS+ ++ + +
Sbjct: 414 PDKTTLSVILSSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECI 473
Query: 165 FDE-IPEKNTVCANALLSGYGEAGLWAQGLELVRKM-PVLRLKYDQFTLSAALRACTGLS 222
FD+ I E + C N+++SG+ L + L L R+M L ++ + + L +C+ L
Sbjct: 474 FDDCINELDIACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLC 533
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRD 282
++ GRQ H V+++ + SD F++++L +MY KCG + A+Q F D V +N
Sbjct: 534 SLLHGRQFHGLVVKSGY--VSDSFVETALTDMYCKCGEIDSARQFF--DAVLRKN----- 584
Query: 283 VVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFE 342
V+W M+ YG NG+ E + L+++M+ G +PDGI F++V++AC H+G V G++
Sbjct: 585 TVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILS 644
Query: 343 SMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVD 402
SM + P +HY C+VD L RAG L+ A +L T YK + +W LL++C
Sbjct: 645 SMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKS----SSVLWEILLSSCRV 700
Query: 403 CGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCS 462
G++ L + ++ + LDP ++ +LLSN Y+ WD+ L+ ++ + + K G S
Sbjct: 701 HGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQS 760
Query: 463 W 463
W
Sbjct: 761 W 761
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 137/291 (47%), Gaps = 19/291 (6%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F M + + +N +IS RKGF AL + M + + L S L+A S+V D
Sbjct: 95 FDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDG 154
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAAL-VFDEIPEKNTVCANALLSG 182
FG + H K G ++FVG+AL+ +Y+K + D + VF+ + + N V A++ G
Sbjct: 155 VFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGG 214
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQ------FTLSAALRACTGLSAV---ELGRQLHSY 233
+ +++ R M ++ D ++SA C LS + ELG+Q+H
Sbjct: 215 LARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNELGKQIHCL 274
Query: 234 VLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVY 293
LR D+ L +SL+E+Y K + A+ +F +VV W M+ +
Sbjct: 275 ALRL--GFGGDLHLNNSLLEIYAKNKDMNGAELIFA-------EMPEVNVVSWNIMIVGF 325
Query: 294 GRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
G+ + + ++ M + G +P+ + ++V+ AC +G V G + F S+
Sbjct: 326 GQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSI 376
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 41/233 (17%)
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLY-------------------------------SK 154
GK IH + ++G S ++ + L+DLY K
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 155 LSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAA 214
+ + +A VFD +PE++ V N ++S G + L + ++M +FTL++
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 215 LRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG-LVKKAQQVFKLDGV 273
L AC+ + G + H ++T D ++F+ ++L+ MY KCG +V +VF + +
Sbjct: 145 LSACSKVLDGVFGMRCHGVAVKTGLD--KNIFVGNALLSMYAKCGFIVDYGVRVF--ESL 200
Query: 274 ESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVIS 326
NE V +T+++G R K E + +F+ M E+G++ D + ++S
Sbjct: 201 SQPNE-----VSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILS 248
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 243/478 (50%), Gaps = 49/478 (10%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
+K+HG ++ G L F + +L+ YA+ ++ H F M + + +N +IS+
Sbjct: 66 EKVHGYAVKAG-LEFDSYVSNSLMGMYASL---GKIEITHKVFDEMPQRDVVSWNGLISS 121
Query: 82 FCRKGFPFLALTAFSFM-HTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSS 140
+ G A+ F M +N+ D + STL+A S + ++ G++I+ V +
Sbjct: 122 YVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV-VTEFEM 180
Query: 141 SVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG------------- 187
SV +G+ALVD++ K + A VFD + +KN C +++ GY G
Sbjct: 181 SVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSP 240
Query: 188 -----LWA-------------QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQ 229
LW + LEL R M ++ D F L + L C A+E G+
Sbjct: 241 VKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKW 300
Query: 230 LHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSM 289
+H Y+ + + D + ++L++MY KCG ++ A +VF + RD WTS+
Sbjct: 301 IHGYI--NENRVTVDKVVGTALVDMYAKCGCIETALEVF-------YEIKERDTASWTSL 351
Query: 290 LGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFK 349
+ NG +DL+ EM G+R D I F+ V++AC H G V G K F SM+
Sbjct: 352 IYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHN 411
Query: 350 LNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCT-ISMWGALLNACVDCGNIEL 408
+ P EH SCL+DLLCRAG L +A EL+++ +G + T + ++ +LL+A + GN+++
Sbjct: 412 VQPKSEHCSCLIDLLCRAGLLDEAEELIDKM--RGESDETLVPVYCSLLSAARNYGNVKI 469
Query: 409 GKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+ ++ +++ ++ LL+++YA W+++ ++R +K+ G+RK GCS +++
Sbjct: 470 AERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEI 527
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 166/333 (49%), Gaps = 29/333 (8%)
Query: 92 LTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDL 151
L F + + D + L L + R+ V G+++H + K G +V ++L+ +
Sbjct: 31 LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGM 90
Query: 152 YSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV-LRLKYDQFT 210
Y+ L ++ VFDE+P+++ V N L+S Y G + + + ++M LK+D+ T
Sbjct: 91 YASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT 150
Query: 211 LSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF-- 268
+ + L AC+ L +E+G +++ +V+ + E V + ++L++M+ KCG + KA+ VF
Sbjct: 151 IVSTLSACSALKNLEIGERIYRFVVT---EFEMSVRIGNALVDMFCKCGCLDKARAVFDS 207
Query: 269 --------------------KLDGVESRNERS--RDVVLWTSMLGVYGRNGKYKEVIDLF 306
++D ERS +DVVLWT+M+ Y + ++ E ++LF
Sbjct: 208 MRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELF 267
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
+ M GIRPD +++++ C TG + G K+ NE ++ + LVD+ +
Sbjct: 268 RCMQTAGIRPDNFVLVSLLTGCAQTGALEQG-KWIHGYINENRVTVDKVVGTALVDMYAK 326
Query: 367 AGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
G ++ A E+ + + + T ++G +N
Sbjct: 327 CGCIETALEVFYEIKERDTASWTSLIYGLAMNG 359
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 131/283 (46%), Gaps = 20/283 (7%)
Query: 177 NALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLR 236
N +L + + + L L ++ L D FTL L++ L V G ++H Y ++
Sbjct: 15 NKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVK 74
Query: 237 TTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRN 296
+E D ++ +SL+ MY G ++ +VF RDVV W ++ Y N
Sbjct: 75 AG--LEFDSYVSNSLMGMYASLGKIEITHKVFD-------EMPQRDVVSWNGLISSYVGN 125
Query: 297 GKYKEVIDLFKEMLEEG-IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPE 355
G++++ I +FK M +E ++ D ++ +SAC + G + + + EF+++
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMS--VR 183
Query: 356 HYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQR 415
+ LVD+ C+ G L KA + ++ M + + W +++ V G I+ ++ +R
Sbjct: 184 IGNALVDMFCKCGCLDKA-----RAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFER 238
Query: 416 ALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKD 458
+ + + + N Y +F +DE L ++ G+R D
Sbjct: 239 S---PVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPD 278
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 207 bits (528), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 118/346 (34%), Positives = 201/346 (58%), Gaps = 14/346 (4%)
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
DV G+ IH+ V + G+ S ++V ++L+ LY+ V A VFD++PEK+ V N++++
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
G+ E G + L L +M +K D FT+ + L AC + A+ LG+++H Y+++ +
Sbjct: 63 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV--GL 120
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
++ + L+++Y +CG V++A+ +F D + +N V WTS++ NG KE
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLF--DEMVDKNS-----VSWTSLIVGLAVNGFGKE 173
Query: 302 VIDLFKEMLE-EGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL 360
I+LFK M EG+ P I F+ ++ AC H G V G +YF M E+K+ P EH+ C+
Sbjct: 174 AIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCM 233
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELD 420
VDLL RAG+++KA+E + + + +W LL AC G+ +L + A + L+L+
Sbjct: 234 VDLLARAGQVKKAYEYIKSMPMQP----NVVIWRTLLGACTVHGDSDLAEFARIQILQLE 289
Query: 421 PHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
P+++G +LLSN+YA W ++ +R + G++K G S V+V
Sbjct: 290 PNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEV 335
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 136/269 (50%), Gaps = 12/269 (4%)
Query: 24 LHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFC 83
+H ++R+G ++ + +L+ YA C + + + F M + + +N +I+ F
Sbjct: 10 IHSVVIRSGFGSLIY-VQNSLLHLYANC---GDVASAYKVFDKMPEKDLVAWNSVINGFA 65
Query: 84 RKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVF 143
G P AL ++ M++ + D + + S L+A +++ + GK++H ++ K+G + ++
Sbjct: 66 ENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLH 125
Query: 144 VGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR 203
+ L+DLY++ V++A +FDE+ +KN+V +L+ G G + +EL + M
Sbjct: 126 SSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 185
Query: 204 -LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVK 262
L + T L AC+ V+ G + +R + IE + ++++ + G VK
Sbjct: 186 GLLPCEITFVGILYACSHCGMVKEGFEYFRR-MREEYKIEPRIEHFGCMVDLLARAGQVK 244
Query: 263 KAQQVFKLDGVESRNERSRDVVLWTSMLG 291
KA + K ++ +VV+W ++LG
Sbjct: 245 KAYEYIKSMPMQP------NVVIWRTLLG 267
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/368 (32%), Positives = 209/368 (56%), Gaps = 31/368 (8%)
Query: 105 LDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALV 164
L+ Y+ C L ++ RV D + K + A W+S +V+ Y+K + DA +
Sbjct: 104 LNMYSSCGDLRSAQRVFDDSGSKDLPA------WNS-------VVNAYAKAGLIDDARKL 150
Query: 165 FDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR-----LKYDQFTLSAALRACT 219
FDE+PE+N + + L++GY G + + L+L R+M + + ++ ++FT+S L AC
Sbjct: 151 FDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACG 210
Query: 220 GLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNER 279
L A+E G+ +H+Y+ + +E D+ L ++LI+MY KCG +++A++VF G +
Sbjct: 211 RLGALEQGKWVHAYI--DKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSK----- 263
Query: 280 SRDVVLWTSMLGVYGRNGKYKEVIDLFKEML-EEGIRPDGIAFLTVISACGHTGQVHAGV 338
+DV +++M+ G E LF EM + I P+ + F+ ++ AC H G ++ G
Sbjct: 264 -KDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 339 KYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLN 398
YF+ M EF + P +HY C+VDL R+G +++A + + + +WG+LL+
Sbjct: 323 SYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEP----DVLIWGSLLS 378
Query: 399 ACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKD 458
G+I+ + A +R +ELDP N+G +LLSN+YA+ G W E+ +R ++ +G+ K
Sbjct: 379 GSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKV 438
Query: 459 VGCSWVQV 466
GCS+V+V
Sbjct: 439 PGCSYVEV 446
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/372 (30%), Positives = 205/372 (55%), Gaps = 23/372 (6%)
Query: 106 DTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVF 165
D + L A + + + GKQ+H + K G+ V+V + L+ LY + A VF
Sbjct: 150 DKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVF 209
Query: 166 DEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVE 225
DE+PE++ V N+++ G + L+L R+M + D +T+ + L AC GL ++
Sbjct: 210 DEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLGSLS 268
Query: 226 LGRQLHSYVLRTTH-DIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVV 284
LG H+++LR D+ DV +++SLIEMY KCG ++ A+QVF+ + RD+
Sbjct: 269 LGTWAHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQ-------GMQKRDLA 321
Query: 285 LWTSMLGVYGRNGKYKEVIDLFKEMLE--EGIRPDGIAFLTVISACGHTGQVHAGVKYFE 342
W +M+ + +G+ +E ++ F M++ E +RP+ + F+ ++ AC H G V+ G +YF+
Sbjct: 322 SWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFD 381
Query: 343 SMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVD 402
M ++ + P EHY C+VDL+ RAG + +A +++ K +W +LL+AC
Sbjct: 382 MMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMSMPMKP----DAVIWRSLLDACCK 437
Query: 403 CG-NIELGKLAGQRALELDPHN-------AGICILLSNLYARFGMWDEIGHLRVVIKERG 454
G ++EL + + + N +G +LLS +YA W+++G +R ++ E G
Sbjct: 438 KGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHG 497
Query: 455 LRKDVGCSWVQV 466
+RK+ GCS +++
Sbjct: 498 IRKEPGCSSIEI 509
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 206 bits (524), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 127/452 (28%), Positives = 245/452 (54%), Gaps = 22/452 (4%)
Query: 18 LSAIKKLHGNLLRTGTLFFLHDLH--TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHF 75
LS +KK+HG + G F D + + L+ +Y+ + Q + F + + + + +
Sbjct: 176 LSDVKKVHGLAFKLG---FDSDCYVGSGLVTSYSKFMSVEDAQKV--FDELPDRDDSVLW 230
Query: 76 NVIISNFCRKGFPFL-ALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
N +++ + + F F AL FS M V + + + S L+A + D++ G+ IH
Sbjct: 231 NALVNGYSQI-FRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAV 289
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
K G S + V +AL+D+Y K +++A +F+ + E++ N++L + G L
Sbjct: 290 KTGSGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLA 349
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRT--THDIESDVFLQSSLI 252
L +M ++ D TL+ L C L+++ GR++H Y++ + + S+ F+ +SL+
Sbjct: 350 LFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLM 409
Query: 253 EMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEE 312
+MY KCG ++ A+ VF + R +D W M+ YG + +D+F M
Sbjct: 410 DMYVKCGDLRDARMVFD-------SMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRA 462
Query: 313 GIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQK 372
G++PD I F+ ++ AC H+G ++ G + M + + P +HY+C++D+L RA +L++
Sbjct: 463 GVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEE 522
Query: 373 AWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSN 432
A+EL + K + + + +W ++L++C GN +L +AG+R EL+P + G +L+SN
Sbjct: 523 AYEL---AISKPICDNPV-VWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSN 578
Query: 433 LYARFGMWDEIGHLRVVIKERGLRKDVGCSWV 464
+Y G ++E+ +R ++++ ++K GCSW+
Sbjct: 579 VYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWI 610
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 119/409 (29%), Positives = 197/409 (48%), Gaps = 38/409 (9%)
Query: 6 IQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATC-LPKNHLQTLHNFF 64
I L +C K+ + +++HG ++R G L T+L+ YA C L + +
Sbjct: 64 IATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-- 121
Query: 65 KCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASS--RVND 122
+ + +N +IS F G P A+ + M N + D Y S L S ++D
Sbjct: 122 ---SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSD 178
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK-NTVCANALLS 181
V K++H KLG+ S +VGS LV YSK SV+DA VFDE+P++ ++V NAL++
Sbjct: 179 V---KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
GY + + L + KM + + T+++ L A T ++ GR +H ++T
Sbjct: 236 GYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSG- 294
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
SD+ + ++LI+MYGK +++A +F E+ +E RD+ W S+L V+ G +
Sbjct: 295 -SDIVVSNALIDMYGKSKWLEEANSIF-----EAMDE--RDLFTWNSVLCVHDYCGDHDG 346
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM----------SNEFKLN 351
+ LF+ ML GIRPD + TV+ CG + G + M SNEF N
Sbjct: 347 TLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHN 406
Query: 352 PGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNAC 400
L+D+ + G+L+ A + + K + I + G + +C
Sbjct: 407 S-------LMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSC 448
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 188/309 (60%), Gaps = 16/309 (5%)
Query: 158 VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRA 217
VKD +F ++ +K+ V N ++ Y + + + +EL +M + D ++++ L A
Sbjct: 262 VKD---MFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPA 318
Query: 218 CTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRN 277
C SA+ LG+++H Y+ R + ++ L+++LI+MY KCG ++KA+ VF+ N
Sbjct: 319 CGDTSALSLGKKIHGYIERKK--LIPNLLLENALIDMYAKCGCLEKARDVFE-------N 369
Query: 278 ERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
+SRDVV WT+M+ YG +G+ + + LF ++ + G+ PD IAF+T ++AC H G + G
Sbjct: 370 MKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEG 429
Query: 338 VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
F+ M++ +K+ P EH +C+VDLL RAG++++A+ + + +WGALL
Sbjct: 430 RSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEP----NERVWGALL 485
Query: 398 NACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRK 457
AC + ++G LA + +L P +G +LLSN+YA+ G W+E+ ++R ++K +GL+K
Sbjct: 486 GACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKK 545
Query: 458 DVGCSWVQV 466
+ G S V+V
Sbjct: 546 NPGASNVEV 554
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 140/290 (48%), Gaps = 15/290 (5%)
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
D+ + +H+ + + +G L+ Y+ L V A VFDEIPE+N + N ++
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
Y G + +G+++ M ++ D +T L+AC+ + +GR++H T +
Sbjct: 114 SYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSA--TKVGL 171
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
S +F+ + L+ MYGKCG + +A+ V LD + RDVV W S++ Y +N ++ +
Sbjct: 172 SSTLFVGNGLVSMYGKCGFLSEARLV--LDEMS-----RRDVVSWNSLVVGYAQNQRFDD 224
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGP-EHYSCL 360
+++ +EM I D +++ A +T V Y + M FK+ ++ +
Sbjct: 225 ALEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMF--FKMGKKSLVSWNVM 280
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGK 410
+ + + +A EL ++ G +S+ ++L AC D + LGK
Sbjct: 281 IGVYMKNAMPVEAVELYSRMEADGFEPDAVSI-TSVLPACGDTSALSLGK 329
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 122/257 (47%), Gaps = 12/257 (4%)
Query: 38 HDLHT--NLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAF 95
HD T +L+ A + +N + FFK M + + +NV+I + + P A+ +
Sbjct: 239 HDAGTMASLLPAVSNTTTENVMYVKDMFFK-MGKKSLVSWNVMIGVYMKNAMPVEAVELY 297
Query: 96 SFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKL 155
S M + D ++ S L A + ++ GK+IH ++ + ++ + +AL+D+Y+K
Sbjct: 298 SRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC 357
Query: 156 SSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAAL 215
++ A VF+ + ++ V A++S YG +G + L K+ L D L
Sbjct: 358 GCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTL 417
Query: 216 RACTGLSAVELGRQLHSYVLRTTH-DIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVE 274
AC+ +E GR + L T H I + + ++++ G+ G VK+A + F D
Sbjct: 418 AACSHAGLLEEGRS--CFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYR-FIQDMSM 474
Query: 275 SRNERSRDVVLWTSMLG 291
NER +W ++LG
Sbjct: 475 EPNER-----VWGALLG 486
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 205 bits (522), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 133/462 (28%), Positives = 229/462 (49%), Gaps = 51/462 (11%)
Query: 43 NLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNN 102
N I + + ++ H F + + + +I F ++ A AF +
Sbjct: 29 NSIPELVKHIDSDLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLG 88
Query: 103 VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAA 162
+ + + + + +S+ DV GKQ+H + K+G +S+VFVGSA+++ Y KLS++ DA
Sbjct: 89 IRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDAR 148
Query: 163 LVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMP---------------------- 200
FD+ + N V L+SGY + + + L L R MP
Sbjct: 149 RCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEE 208
Query: 201 -------VLR---LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+LR + ++ T A+ A + +++ G+ +H+ ++ +VF+ +S
Sbjct: 209 AVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGK-RFNVFVWNS 267
Query: 251 LIEMYGKCGLVKKAQQVF-KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
LI Y KCG ++ + F KL+ E R++V W SM+ Y NG+ +E + +F++M
Sbjct: 268 LISFYSKCGNMEDSLLAFNKLE------EEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKM 321
Query: 310 LEE-GIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGP---EHYSCLVDLLC 365
+++ +RP+ + L V+ AC H G + G YF N++ +P EHY+C+VD+L
Sbjct: 322 VKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEHYACMVDMLS 380
Query: 366 RAGELQKAWELL-NQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNA 424
R+G ++A EL+ + L G+G W ALL C N L KLA + LELDP +
Sbjct: 381 RSGRFKEAEELIKSMPLDPGIG-----FWKALLGGCQIHSNKRLAKLAASKILELDPRDV 435
Query: 425 GICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
++LSN Y+ W + +R +KE GL++ GCSW++V
Sbjct: 436 SSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEV 477
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 116/238 (48%), Gaps = 17/238 (7%)
Query: 42 TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN 101
TNLI+ Y L K+ + + F+ M + + +N +I F + G A+ F M
Sbjct: 163 TNLISGY---LKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLRE 219
Query: 102 NV--PLDTYALCSTLTASSRVNDVNFGKQIHAHVGK-LGWSSSVFVGSALVDLYSKLSSV 158
V P ++ C+ +TA S + GK IHA K LG +VFV ++L+ YSK ++
Sbjct: 220 GVVIPNESTFPCA-ITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNM 278
Query: 159 KDAALVFDEIPE--KNTVCANALLSGYGEAGLWAQGLELVRKM-PVLRLKYDQFTLSAAL 215
+D+ L F+++ E +N V N+++ GY G + + + KM L+ + T+ L
Sbjct: 279 EDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVL 338
Query: 216 RACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ----SSLIEMYGKCGLVKKAQQVFK 269
AC ++ G + Y + +D + L+ + +++M + G K+A+++ K
Sbjct: 339 FACNHAGLIQEG---YMYFNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIK 393
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 205 bits (521), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 140/492 (28%), Positives = 243/492 (49%), Gaps = 52/492 (10%)
Query: 7 QFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAY--ATCLPKNHLQTLHNFF 64
+ L H + + ++H +LLR FLH +NL+ A+ + C ++ + F
Sbjct: 6 KLLRLLHGHNTRTRLPEIHAHLLR----HFLHG--SNLLLAHFISICGSLSNSDYANRVF 59
Query: 65 KCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVN 124
+ + N L FN +I + G P +L+ FS M + + D Y L + S ++D+
Sbjct: 60 SHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLR 119
Query: 125 FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYG 184
FGK +H + + G+ + +V+LY+ + DA VFDE+ E+N V N ++ G+
Sbjct: 120 FGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFC 179
Query: 185 EAGLWAQGLELVRKMP----------------------VLRL---------KYDQFTLSA 213
++G +GL L ++M L L D+ T+
Sbjct: 180 DSGDVERGLHLFKQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVT 239
Query: 214 ALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGV 273
L L ++ G+ +HS ++ + + + ++L++ Y K G ++ A +F
Sbjct: 240 VLPISASLGVLDTGKWIHSTA-ESSGLFKDFITVGNALVDFYCKSGDLEAATAIF----- 293
Query: 274 ESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG-IRPDGIAFLTVISACGHTG 332
R + R+VV W +++ NGK + IDLF M+EEG + P+ FL V++ C +TG
Sbjct: 294 --RKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTG 351
Query: 333 QVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISM 392
QV G + F M FKL EHY +VDL+ R+G + +A++ L N +M
Sbjct: 352 QVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPV----NANAAM 407
Query: 393 WGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKE 452
WG+LL+AC G+++L ++A ++++P N+G +LLSNLYA G W ++ +R ++K+
Sbjct: 408 WGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKVRTLMKK 467
Query: 453 RGLRKDVGCSWV 464
LRK G S +
Sbjct: 468 NRLRKSTGQSTI 479
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 139/425 (32%), Positives = 216/425 (50%), Gaps = 19/425 (4%)
Query: 40 LHTNLIAAYATCLPKNHL-QTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFM 98
L + L+ AY+ NHL T + F M N +N+II F R GF ++ F M
Sbjct: 68 LSSKLVLAYSKL---NHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRM 124
Query: 99 HTNN-VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSS 157
+ V D + L L A S + G IH KLG+SSS+FV SALV +Y +
Sbjct: 125 WRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGK 184
Query: 158 VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRA 217
+ A +FD++P +++V A+ GY + G GL + R+M D + + L A
Sbjct: 185 LLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA 244
Query: 218 CTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRN 277
C L A++ G+ +H + +R + + L +++ +MY KC ++ A VF N
Sbjct: 245 CGQLGALKHGKSVHGWCIRRCSCLGLN--LGNAITDMYVKCSILDYAHTVFV-------N 295
Query: 278 ERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
RDV+ W+S++ YG +G LF EML+EGI P+ + FL V+SAC H G V
Sbjct: 296 MSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKS 355
Query: 338 VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
YF M E+ + P +HY+ + D + RAG L++A + L K ++ GA+L
Sbjct: 356 WLYFRLM-QEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKP----DEAVMGAVL 410
Query: 398 NACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRK 457
+ C GN+E+G+ + ++L P A + L+ LY+ G +DE LR +KE+ + K
Sbjct: 411 SGCKVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISK 470
Query: 458 DVGCS 462
GCS
Sbjct: 471 VPGCS 475
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 204 bits (520), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 142/485 (29%), Positives = 237/485 (48%), Gaps = 59/485 (12%)
Query: 20 AIKKLHGNLLRTGTLFFLHDLHTN--LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNV 77
A KK+H ++++TG F DL+ + L+ + C L F + +N
Sbjct: 52 AGKKIHADIIKTG---FQPDLNISIKLLILHLKC---GCLSYARQVFDELPKPTLSAYNY 105
Query: 78 IISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTAS-SRVNDVNFGKQ----IHAH 132
+IS + + G L M + D Y L L AS SR + + + +HA
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 133 VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQG 192
+ K + +ALVD Y K ++ A VF+ + ++N VC +++SGY G
Sbjct: 166 IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDA 225
Query: 193 LEL-----VRKMPVLRLKYDQF---------------------------TLSAALRACTG 220
E+ V+ + V + F T ++ + AC+
Sbjct: 226 EEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSV 285
Query: 221 LSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS 280
L++ E+G+Q+H+ ++++ + + + + SSL++MY KCG + A++VF D ++ +N
Sbjct: 286 LTSHEVGQQVHAQIMKS--GVYTHIKMGSSLLDMYAKCGGINDARRVF--DQMQEKN--- 338
Query: 281 RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKY 340
V WTSM+ YG+NG +E ++LF M E I P+ + FL +SAC H+G V G +
Sbjct: 339 --VFSWTSMIDGYGKNGNPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEI 396
Query: 341 FESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNAC 400
FESM ++ + P EHY+C+VDL+ RAG+L KA+E + + +W ALL++C
Sbjct: 397 FESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFEFARAMPERPDSD----IWAALLSSC 452
Query: 401 VDCGNIELGKLAGQRALELDP-HNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDV 459
GN+EL +A +L+ G + LSN+YA WD + +R V+K R + K +
Sbjct: 453 NLHGNVELASIAASELFKLNADKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTI 512
Query: 460 GCSWV 464
G SW
Sbjct: 513 GRSWT 517
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 126/450 (28%), Positives = 231/450 (51%), Gaps = 21/450 (4%)
Query: 21 IKKLHGNLLRTGTLFFLHDLH--TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVI 78
+K++H +L+ G H++ +I++YA C + + + F S + + +N +
Sbjct: 222 LKQVHAKVLKLG---LQHEITICNAMISSYADCGSVSDAKRV--FDGLGGSKDLISWNSM 276
Query: 79 ISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGW 138
I+ F + A F M + V D Y L+A S FGK +H V K G
Sbjct: 277 IAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGL 336
Query: 139 SSSVFVGSALVDLYSKLSS--VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELV 196
+AL+ +Y + + ++DA +F+ + K+ + N++++G+ + GL ++
Sbjct: 337 EQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFF 396
Query: 197 RKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYG 256
+ +K D + SA LR+C+ L+ ++LG+Q+H+ L T S+ F+ SSLI MY
Sbjct: 397 SYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHA--LATKSGFVSNEFVISSLIVMYS 454
Query: 257 KCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRP 316
KCG+++ A++ F+ + S++ V W +M+ Y ++G + +DLF +M + ++
Sbjct: 455 KCGIIESARKCFQ--QISSKHS----TVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKL 508
Query: 317 DGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWEL 376
D + F +++AC HTG + G++ M +K+ P EHY+ VDLL RAG + KA EL
Sbjct: 509 DHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKEL 568
Query: 377 LNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYAR 436
+ N + L C CG IE+ LE++P + + LS++Y+
Sbjct: 569 IESMPL----NPDPMVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSD 624
Query: 437 FGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
W+E ++ ++KERG++K G SW+++
Sbjct: 625 LKKWEEKASVKKMMKERGVKKVPGWSWIEI 654
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 136/278 (48%), Gaps = 19/278 (6%)
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F M + + +N +IS + G A F+ M + +D Y+ L + V
Sbjct: 57 LFDEMPKRDSVSWNTMISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKR 116
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ G+Q+H V K G+ +V+VGS+LVD+Y+K V+DA F EI E N+V NAL++G
Sbjct: 117 FDLGEQVHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAG 176
Query: 183 YGE-----AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRT 237
+ + W GL ++ + D T + L L +Q+H+ VL+
Sbjct: 177 FVQVRDIKTAFWLLGLMEMKAAVTM----DAGTFAPLLTLLDDPMFCNLLKQVHAKVLKL 232
Query: 238 THDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNG 297
++ ++ + +++I Y CG V A++VF DG+ S+D++ W SM+ + ++
Sbjct: 233 --GLQHEITICNAMISSYADCGSVSDAKRVF--DGLGG----SKDLISWNSMIAGFSKHE 284
Query: 298 KYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVH 335
+ +LF +M + D + ++SAC +G+ H
Sbjct: 285 LKESAFELFIQMQRHWVETDIYTYTGLLSAC--SGEEH 320
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 130 HAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLW 189
H + K G S ++V + ++D Y K + A ++FDE+P++++V N ++SGY G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 190 AQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQS 249
L M D ++ S L+ + +LG Q+H V++ + E +V++ S
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGY--ECNVYVGS 140
Query: 250 SLIEMYGKCGLVKKAQQVFK 269
SL++MY KC V+ A + FK
Sbjct: 141 SLVDMYAKCERVEDAFEAFK 160
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 121/402 (30%), Positives = 209/402 (51%), Gaps = 15/402 (3%)
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F + N +N ++ + + + F + + +D+ + S +++ S +
Sbjct: 389 FCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGA 448
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
V GK +H +V K ++ V ++L+DLY K+ + A +F E + N + NA+++
Sbjct: 449 VLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIAS 507
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
Y + + L +M K TL L AC ++E G+ +H Y+ T H E
Sbjct: 508 YVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH--E 565
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
++ L ++LI+MY KCG ++K++++F ++ N++ D V W M+ YG +G +
Sbjct: 566 MNLSLSAALIDMYAKCGHLEKSRELF-----DAGNQK--DAVCWNVMISGYGMHGDVESA 618
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVD 362
I LF +M E ++P G FL ++SAC H G V G K F M +++ + P +HYSCLVD
Sbjct: 619 IALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVD 677
Query: 363 LLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPH 422
LL R+G L++A + + G +WG LL++C+ G E+G +RA+ DP
Sbjct: 678 LLSRSGNLEEAESTVMSMPFSPDG----VIWGTLLSSCMTHGEFEMGIRMAERAVASDPQ 733
Query: 423 NAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWV 464
N G I+L+N+Y+ G W+E R +++E G+ K G S V
Sbjct: 734 NDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 165/387 (42%), Gaps = 21/387 (5%)
Query: 24 LHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFC 83
+HG +L+ G + + + Y+ C LQ F M + + + IIS
Sbjct: 147 VHGLVLKHGGFDRNTAVGASFVYFYSKC---GFLQDACLVFDEMPDRDVVAWTAIISGHV 203
Query: 84 RKGFPFLALTAFSFMHTNNVPLD---TYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSS 140
+ G L MH+ +D L A S + + G+ +H K G +S
Sbjct: 204 QNGESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLAS 263
Query: 141 SVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMP 200
S FV S++ YSK + +A L F E+ +++ ++++ +G + ++ +M
Sbjct: 264 SKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQ 323
Query: 201 VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGL 260
+ D +S + + V G+ H +V+R ++S V +SL+ MY K L
Sbjct: 324 NKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVC--NSLLSMYCKFEL 381
Query: 261 VKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIA 320
+ A+++F E E W +ML YG+ + + I+LF+++ GI D +
Sbjct: 382 LSVAEKLFCRISEEGNKEA------WNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSAS 435
Query: 321 FLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQT 380
+VIS+C H G V G K + L+ + L+DL + G+L AW + +
Sbjct: 436 ATSVISSCSHIGAVLLG-KSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCE- 493
Query: 381 LYKGMGNCTISMWGALLNACVDCGNIE 407
+ + W A++ + V C E
Sbjct: 494 -----ADTNVITWNAMIASYVHCEQSE 515
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 137 GWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELV 196
G S ++FV S L+ Y+ ++ VF + ++ N+++ + G +A+ L
Sbjct: 54 GLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDYARSLCFF 113
Query: 197 RKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYG 256
M + D FT + AC L +G +H VL+ + + + +S + Y
Sbjct: 114 FSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG-GFDRNTAVGASFVYFYS 172
Query: 257 KCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGI-- 314
KCG ++ A VF RDVV WT+++ + +NG+ + + +M G
Sbjct: 173 KCGFLQDACLVFD-------EMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDV 225
Query: 315 -RPDGIAFLTVISACGHTGQVHAG--------------VKYFESMSNEF---KLNPGPEH 356
+P+ AC + G + G K+ +S F NP +
Sbjct: 226 DKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAY 285
Query: 357 -------------YSCLVDLLCRAGELQKAWELLNQTLYKGM 385
++ ++ L R+G++++++++ + KGM
Sbjct: 286 LSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKGM 327
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/448 (30%), Positives = 230/448 (51%), Gaps = 23/448 (5%)
Query: 27 NLLRTGTLF--FLHDLHT--NLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNF 82
NLL T TL F D T +L+ +Y + + T F M N + + +IS +
Sbjct: 49 NLLHTLTLKLGFASDTFTVNHLVISY---VKLKEINTARKLFDEMCEPNVVSWTSVISGY 105
Query: 83 CRKGFPFLALTAFSFMHTNN-VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
G P AL+ F MH + VP + Y S A S + + GK IHA + G +
Sbjct: 106 NDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRN 165
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPE--KNTVCANALLSGYGEAGLWAQGLELVRKM 199
+ V S+LVD+Y K + V+ A VFD + +N V ++++ Y + + +EL R
Sbjct: 166 IVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSF 225
Query: 200 --PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGK 257
+ + +QF L++ + AC+ L ++ G+ H V R + ES+ + +SL++MY K
Sbjct: 226 NAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGY--ESNTVVATSLLDMYAK 283
Query: 258 CGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPD 317
CG + A+++F R V+ +TSM+ ++G + + LF EM+ I P+
Sbjct: 284 CGSLSCAEKIF-------LRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPN 336
Query: 318 GIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELL 377
+ L V+ AC H+G V+ G++Y M+ ++ + P HY+C+VD+L R G + +A+EL
Sbjct: 337 YVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELA 396
Query: 378 NQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARF 437
+T+ G + +WGALL+A G +E+ A +R ++ + I LSN YA
Sbjct: 397 -KTIEVGAEQGAL-LWGALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVS 454
Query: 438 GMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
G W++ LR+ +K G K+ CSW++
Sbjct: 455 GGWEDSESLRLEMKRSGNVKERACSWIE 482
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/451 (27%), Positives = 237/451 (52%), Gaps = 18/451 (3%)
Query: 17 NLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFN 76
+L + LH +++TG +H L T LI Y C + + + + + + + + +
Sbjct: 260 DLEMGRMLHCQIVKTGFDVDMH-LKTALITMYLKCGKE---EASYRVLETIPNKDVVCWT 315
Query: 77 VIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKL 136
V+IS R G AL FS M + L + A+ S + + +++ + G +H +V +
Sbjct: 316 VMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRH 375
Query: 137 GWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELV 196
G++ ++L+ +Y+K + + ++F+ + E++ V NA++SGY + + L L
Sbjct: 376 GYTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLF 435
Query: 197 RKMPVLRLK-YDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
+M ++ D FT+ + L+AC+ A+ +G+ +H V+R+ I + ++L++MY
Sbjct: 436 EEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF--IRPCSLVDTALVDMY 493
Query: 256 GKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIR 315
KCG ++ AQ+ F D + + DVV W ++ YG +GK ++++ E L G+
Sbjct: 494 SKCGYLEAAQRCF--DSISWK-----DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGME 546
Query: 316 PDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWE 375
P+ + FL V+S+C H G V G+K F SM +F + P EH +C+VDLLCRA ++ A++
Sbjct: 547 PNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRIEDAFK 606
Query: 376 LLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYA 435
+ + +I + G +L+AC G E+ + + +EL P +AG + L + +A
Sbjct: 607 FYKENFTRP----SIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSFA 662
Query: 436 RFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
WD++ ++ GL+K G S +++
Sbjct: 663 AMKRWDDVSESWNQMRSLGLKKLPGWSKIEM 693
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 191/434 (44%), Gaps = 53/434 (12%)
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
+NST +FN I++ G L+ FS M N + DT+ S L A + + ++FG
Sbjct: 8 LNSTK--YFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFG 65
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
IH V G+SS ++ S+LV+LY+K + A VF+E+ E++ V A++ Y A
Sbjct: 66 LSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRA 125
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
G+ + LV +M +K TL L +G+ + + LH + + + + D+
Sbjct: 126 GIVGEACSLVNEMRFQGIKPGPVTL---LEMLSGVLEITQLQCLHDFAV--IYGFDCDIA 180
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
+ +S++ +Y KC V A+ +F D +E RD+V W +M+ Y G E++ L
Sbjct: 181 VMNSMLNLYCKCDHVGDAKDLF--DQME-----QRDMVSWNTMISGYASVGNMSEILKLL 233
Query: 307 KEMLEEGIRPDGIAFLTVISACG-----------HTGQVHAGVK---YFESMSNEFKLNP 352
M +G+RPD F +S G H V G + ++ L
Sbjct: 234 YRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKC 293
Query: 353 GPEHYSCLV-------DLLC---------RAGELQKAWELLNQTLYKGMGNCTISMWGAL 396
G E S V D++C R G +KA + ++ L G + + ++
Sbjct: 294 GKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSG-SDLSSEAIASV 352
Query: 397 LNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHL--RVVIKERG 454
+ +C G+ +LG L G + L + M+ + GHL +VI ER
Sbjct: 353 VASCAQLGSFDLGASVHGYVLR-----HGYTLDTPALNSLITMYAKCGHLDKSLVIFERM 407
Query: 455 LRKDVGCSWVQVTS 468
+D+ SW + S
Sbjct: 408 NERDL-VSWNAIIS 420
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 161/356 (45%), Gaps = 19/356 (5%)
Query: 43 NLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNN 102
+++ Y C +H+ + F M + + +N +IS + G L M +
Sbjct: 184 SMLNLYCKC---DHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGDG 240
Query: 103 VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAA 162
+ D ++L+ S + D+ G+ +H + K G+ + + +AL+ +Y K + +
Sbjct: 241 LRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASY 300
Query: 163 LVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS 222
V + IP K+ VC ++SG G + L + +M +++ + +C L
Sbjct: 301 RVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLG 360
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRD 282
+ +LG +H YVLR + +++ +SLI MY KCG + K+ +F E NE RD
Sbjct: 361 SFDLGASVHGYVLRHGYTLDTPAL--NSLITMYAKCGHLDKSLVIF-----ERMNE--RD 411
Query: 283 VVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRP-DGIAFLTVISACGHTGQVHAGVKYF 341
+V W +++ Y +N + + LF+EM + ++ D ++++ AC G + G K
Sbjct: 412 LVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVG-KLI 470
Query: 342 ESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
+ + P + LVD+ + G L+ A + +K + WG L+
Sbjct: 471 HCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWK-----DVVSWGILI 521
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 143/492 (29%), Positives = 242/492 (49%), Gaps = 65/492 (13%)
Query: 15 TKNLSAIKKLHGNLLRTGTLFFLHD----LHTNLIAAYATCLPKNHLQTLHNFFKCMNST 70
++++ + ++H +LR L LH L+ L AYA+ H + H+ +
Sbjct: 39 SQSVDEVLQIHAAILRHNLL--LHPRYPVLNLKLHRAYAS-----HGKIRHSLALFHQTI 91
Query: 71 NP--LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
+P F I+ G A + + ++ + + + S L + S GK
Sbjct: 92 DPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKL 147
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCA------------ 176
IH HV K G +V + LVD+Y+K V A VFD +PE++ V +
Sbjct: 148 IHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGN 207
Query: 177 -------------------NALLSGYGEAGLWAQGLELVRKMPVL-RLKYDQFTLSAALR 216
N ++ GY + G L L +K+ + K D+ T+ AAL
Sbjct: 208 VEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALS 267
Query: 217 ACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESR 276
AC+ + A+E GR +H +V + I +V + + LI+MY KCG +++A VF
Sbjct: 268 ACSQIGALETGRWIHVFV--KSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFN------- 318
Query: 277 NERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLE-EGIRPDGIAFLTVISACGHTGQVH 335
+ +D+V W +M+ Y +G ++ + LF EM G++P I F+ + AC H G V+
Sbjct: 319 DTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVN 378
Query: 336 AGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMG-NCTISMWG 394
G++ FESM E+ + P EHY CLV LL RAG+L++A+E + K M + +W
Sbjct: 379 EGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETI-----KNMNMDADSVLWS 433
Query: 395 ALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERG 454
++L +C G+ LGK + + L+ N+GI +LLSN+YA G ++ + +R ++KE+G
Sbjct: 434 SVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKG 493
Query: 455 LRKDVGCSWVQV 466
+ K+ G S +++
Sbjct: 494 IVKEPGISTIEI 505
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 135/480 (28%), Positives = 240/480 (50%), Gaps = 48/480 (10%)
Query: 18 LSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNV 77
L+ KKLH ++++ G L+ + L+ Y+ C + F + +N+
Sbjct: 151 LACGKKLHCHVVKFGLGSNLY-VQNALVKMYSLC---GLMDMARGVFDRRCKEDVFSWNL 206
Query: 78 IISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG 137
+IS + R ++ M N V + L L+A S+V D + K++H +V +
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 138 WSSSVFVGSALVDLYS-------------------------------KLSSVKDAALVFD 166
S+ + +ALV+ Y+ + ++K A FD
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 167 EIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVEL 226
++P ++ + ++ GY AG + + LE+ R+M + D+FT+ + L AC L ++E+
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 227 GRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLW 286
G + +Y+ + I++DV + ++LI+MY KCG +KAQ+VF + RD W
Sbjct: 387 GEWIKTYI--DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVF-------HDMDQRDKFTW 437
Query: 287 TSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSN 346
T+M+ NG+ +E I +F +M + I+PD I +L V+SAC H+G V K+F M +
Sbjct: 438 TAMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRS 497
Query: 347 EFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNI 406
+ ++ P HY C+VD+L RAG +++A+E+L + N +WGALL A +
Sbjct: 498 DHRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKMPM----NPNSIVWGALLGASRLHNDE 553
Query: 407 ELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+ +LA ++ LEL+P N + LL N+YA W ++ +R I + ++K G S ++V
Sbjct: 554 PMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEV 613
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 146/528 (27%), Positives = 236/528 (44%), Gaps = 87/528 (16%)
Query: 9 LHQC----HVTKNLSAIKKLHGNLLRTGT---LFFLHDLHTNLIAAYATCLPKNHLQTLH 61
+H C + KNL A+ ++HG ++ G +F L + + + LP L
Sbjct: 5 IHHCLSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLL- 63
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAF-SFMHTNNVPLDTYALCSTLTASSRV 120
C + FN ++ + P ++ F M V D+++ + A
Sbjct: 64 ----CFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENF 119
Query: 121 NDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANA-- 178
+ G Q+H K G S +FVG+ L+ +Y V+ A VFDE+ + N V NA
Sbjct: 120 RSLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVI 179
Query: 179 -----------------------------LLSGYGEAGLWAQGLELVRKMP--------- 200
+L+GY +AG + +MP
Sbjct: 180 TACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWST 239
Query: 201 ----------------VLR------LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTT 238
R + ++ +L+ L AC+ + E G+ LH +V +
Sbjct: 240 MIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAG 299
Query: 239 HDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGK 298
+ V + ++LI+MY +CG V A+ VF +G++ + R +V WTSM+ +G+
Sbjct: 300 YSW--IVSVNNALIDMYSRCGNVPMARLVF--EGMQEK----RCIVSWTSMIAGLAMHGQ 351
Query: 299 YKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYS 358
+E + LF EM G+ PDGI+F++++ AC H G + G YF M + + P EHY
Sbjct: 352 GEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYG 411
Query: 359 CLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALE 418
C+VDL R+G+LQKA++ + Q T +W LL AC GNIEL + QR E
Sbjct: 412 CMVDLYGRSGKLQKAYDFICQMPIPP----TAIVWRTLLGACSSHGNIELAEQVKQRLNE 467
Query: 419 LDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
LDP+N+G +LLSN YA G W ++ +R + + ++K S V+V
Sbjct: 468 LDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEV 515
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 130/471 (27%), Positives = 224/471 (47%), Gaps = 26/471 (5%)
Query: 2 SNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLH 61
S +++ + K+L ++ +H +R G + +T I+ Y C L +
Sbjct: 153 SVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT-WISTYGKC---GDLDSAK 208
Query: 62 NFFKCMNSTNP--LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSR 119
F+ ++ + + +N + + G F A + M D + +
Sbjct: 209 LVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQN 268
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANAL 179
+ G+ IH+H LG + + + +YSK A L+FD + + V +
Sbjct: 269 PETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVM 328
Query: 180 LSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTH 239
+SGY E G + L L M K D TL + + C ++E G+ + +
Sbjct: 329 ISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDARA----- 383
Query: 240 DI----ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGR 295
DI +V + ++LI+MY KCG + +A+ +F N + VV WT+M+ Y
Sbjct: 384 DIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD-------NTPEKTVVTWTTMIAGYAL 436
Query: 296 NGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPE 355
NG + E + LF +M++ +P+ I FL V+ AC H+G + G +YF M + ++PG +
Sbjct: 437 NGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLD 496
Query: 356 HYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQR 415
HYSC+VDLL R G+L++A EL+ K +WGALLNAC N+++ + A +
Sbjct: 497 HYSCMVDLLGRKGKLEEALELIRNMSAKP----DAGIWGALLNACKIHRNVKIAEQAAES 552
Query: 416 ALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
L+P A + ++N+YA GMWD +R ++K+R ++K G S +QV
Sbjct: 553 LFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQV 603
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 175/396 (44%), Gaps = 40/396 (10%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N+ I + P +L F M + + A +R+ DV + +HAH+
Sbjct: 20 WNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLI 79
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
K + S VFVG+A VD++ K +SV AA VF+ +PE++ NA+LSG+ ++G +
Sbjct: 80 KSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFS 139
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
L R+M + + D T+ +++ + +++L +H+ +R D++ V + ++ I
Sbjct: 140 LFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQ--VTVANTWIST 197
Query: 255 YGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGI 314
YGKCG + A+ VF E+ + R VV W SM Y G+ + L+ ML E
Sbjct: 198 YGKCGDLDSAKLVF-----EAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEF 252
Query: 315 RPDGIAFLTVISACG-----------HTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
+PD F+ + ++C H+ +H G N F +C L
Sbjct: 253 KPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARL 312
Query: 364 L-------------------CRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG 404
L G++ +A L + + G +++ +L++ C G
Sbjct: 313 LFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLL-SLISGCGKFG 371
Query: 405 NIELGKLAGQRA--LELDPHNAGICILLSNLYARFG 438
++E GK RA N IC L ++Y++ G
Sbjct: 372 SLETGKWIDARADIYGCKRDNVMICNALIDMYSKCG 407
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 166/394 (42%), Gaps = 25/394 (6%)
Query: 12 CHVTKNLSAIKKLHGNLLRTGTLFFLHDLH--TNLIAAYATCLPKNHLQTLHNFFKCMNS 69
C ++ + +H +L+++ F D+ T + + C N + F+ M
Sbjct: 62 CARLADVGCCEMVHAHLIKSP---FWSDVFVGTATVDMFVKC---NSVDYAAKVFERMPE 115
Query: 70 TNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQI 129
+ +N ++S FC+ G A + F M N + D+ + + + ++S + + +
Sbjct: 116 RDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAM 175
Query: 130 HAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIP--EKNTVCANALLSGYGEAG 187
HA +LG V V + + Y K + A LVF+ I ++ V N++ Y G
Sbjct: 176 HAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFG 235
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYV--LRTTHDIESDV 245
L M K D T +C + GR +HS+ L T DIE+
Sbjct: 236 EAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEA-- 293
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
++ I MY K A+ +F + SR V WT M+ Y G E + L
Sbjct: 294 --INTFISMYSKSEDTCSARLLFDI-------MTSRTCVSWTVMISGYAEKGDMDEALAL 344
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY-SCLVDLL 364
F M++ G +PD + L++IS CG G + G K+ ++ ++ + + L+D+
Sbjct: 345 FHAMIKSGEKPDLVTLLSLISGCGKFGSLETG-KWIDARADIYGCKRDNVMICNALIDMY 403
Query: 365 CRAGELQKAWELLNQTLYKGMGNCTISMWGALLN 398
+ G + +A ++ + T K + T + G LN
Sbjct: 404 SKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALN 437
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 220/432 (50%), Gaps = 21/432 (4%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCR-----KGFPFLALTA 94
+ T L+ YA L+ F M S N + +N +IS F + A
Sbjct: 289 VRTALLDMYA---KNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKL 345
Query: 95 FSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSK 154
F M + L A S + +G+QIHA + K + S F+GSAL++LY+
Sbjct: 346 FMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYAL 405
Query: 155 LSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAA 214
+ S +D F +++ +++ + + +L R++ ++ +++T+S
Sbjct: 406 MGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLM 465
Query: 215 LRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVE 274
+ AC +A+ G Q+ Y +++ D + V ++S I MY K G + A QVF +E
Sbjct: 466 MSACADFAALSSGEQIQGYAIKSGIDAFTSV--KTSSISMYAKSGNMPLANQVF----IE 519
Query: 275 SRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQV 334
+N DV +++M+ ++G E +++F+ M GI+P+ AFL V+ AC H G V
Sbjct: 520 VQNP---DVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLV 576
Query: 335 HAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWG 394
G+KYF+ M N++++NP +H++CLVDLL R G L A L+ L G + ++ W
Sbjct: 577 TQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLI---LSSGFQDHPVT-WR 632
Query: 395 ALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERG 454
ALL++C + +GK +R +EL+P +G +LL N+Y G+ +R ++++RG
Sbjct: 633 ALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRG 692
Query: 455 LRKDVGCSWVQV 466
++K+ SW+ +
Sbjct: 693 VKKEPALSWIVI 704
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 23/302 (7%)
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV 120
F M N + FN +IS + + GF A+ F N+ LD + L
Sbjct: 102 RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGER 161
Query: 121 NDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALL 180
D++ G+ +H V G S VF+ + L+D+YSK + A +FD E++ V N+L+
Sbjct: 162 CDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLI 221
Query: 181 SGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACT---GLSAVELGRQLHSYVLRT 237
SGY G + L L+ KM L + L + L+AC +E G +H Y +
Sbjct: 222 SGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKL 281
Query: 238 THDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGR-- 295
+E D+ ++++L++MY K G +K+A ++F L S++VV + +M+ + +
Sbjct: 282 --GMEFDIVVRTALLDMYAKNGSLKEAIKLFSL-------MPSKNVVTYNAMISGFLQMD 332
Query: 296 ---NGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG------HTGQVHAGVKYFESMSN 346
+ E LF +M G+ P F V+ AC + Q+HA + S+
Sbjct: 333 EITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSD 392
Query: 347 EF 348
EF
Sbjct: 393 EF 394
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 165/354 (46%), Gaps = 29/354 (8%)
Query: 86 GFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVG 145
G+ FL+ S N LD+ +++ V GK H H+ K + +++
Sbjct: 30 GYRFLS----SLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLL 85
Query: 146 SALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLK 205
+ L+++Y K + A +FD +PE+N + N+L+SGY + G + Q +EL + LK
Sbjct: 86 NNLLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLK 145
Query: 206 YDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQ 265
D+FT + AL C ++LG LH V+ + + VFL + LI+MY KCG + +A
Sbjct: 146 LDKFTYAGALGFCGERCDLDLGELLHGLVV--VNGLSQQVFLINVLIDMYSKCGKLDQAM 203
Query: 266 QVF-KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTV 324
+F + D RD V W S++ Y R G +E ++L +M +G+ A +V
Sbjct: 204 SLFDRCD--------ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSV 255
Query: 325 ISACG---HTGQVHAGVK---YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLN 378
+ AC + G + G+ Y + EF + + L+D+ + G L++A +L +
Sbjct: 256 LKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVV----RTALLDMYAKNGSLKEAIKLFS 311
Query: 379 QTLYKGMGNCTISMWGAL-LNACVDCGNIELGKL---AGQRALELDPHNAGICI 428
K + + G L ++ D + E KL +R LE P + +
Sbjct: 312 LMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVL 365
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 201 bits (512), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 200/359 (55%), Gaps = 17/359 (4%)
Query: 106 DTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVF 165
D++ + +TA +++ + +++ + K V V +A++ Y + +K A +F
Sbjct: 116 DSFCCTTLITAYAKLGALCCARRVFDEMSK----RDVPVWNAMITGYQRRGDMKAAMELF 171
Query: 166 DEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR-LKYDQFTLSAALRACTGLSAV 224
D +P KN ++SG+ + G +++ L++ M + +K + T+ + L AC L +
Sbjct: 172 DSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGEL 231
Query: 225 ELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVV 284
E+GR+L Y + ++++ ++ IEMY KCG++ A+++F+ G R++
Sbjct: 232 EIGRRLEGYA--RENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELG------NQRNLC 283
Query: 285 LWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
W SM+G +GK+ E + LF +ML EG +PD + F+ ++ AC H G V G + F+SM
Sbjct: 284 SWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSM 343
Query: 345 SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG 404
K++P EHY C++DLL R G+LQ+A++L+ K +WG LL AC G
Sbjct: 344 EEVHKISPKLEHYGCMIDLLGRVGKLQEAYDLIKTMPMKP----DAVVWGTLLGACSFHG 399
Query: 405 NIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSW 463
N+E+ ++A + +L+P N G C+++SN+YA WD + +R ++K+ + K G S+
Sbjct: 400 NVEIAEIASEALFKLEPTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSY 458
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/459 (29%), Positives = 238/459 (51%), Gaps = 21/459 (4%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTG---TLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFK 65
L C L+ K+LH ++++G + F + + LI Y+ C + + + K
Sbjct: 245 LKACSFGGLLTMGKQLHCCVVKSGLESSPFAI----SALIDMYSNCGSLIYAADVFHQEK 300
Query: 66 CMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNF 125
+++ +N ++S F AL ++ +++ D+Y L L ++
Sbjct: 301 LAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRL 360
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
G Q+H+ V G+ VGS LVDL++ + +++DA +F +P K+ + + L+ G +
Sbjct: 361 GLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK 420
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
+G + L R++ L L DQF +S L+ C+ L+++ G+Q+H ++ + ES+
Sbjct: 421 SGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGY--ESEP 478
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
++L++MY KCG + +F DG+ RDVV WT ++ +G+NG+ +E
Sbjct: 479 VTATALVDMYVKCGEIDNGVVLF--DGM-----LERDVVSWTGIIVGFGQNGRVEEAFRY 531
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLC 365
F +M+ GI P+ + FL ++SAC H+G + E+M +E+ L P EHY C+VDLL
Sbjct: 532 FHKMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLG 591
Query: 366 RAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAG 425
+AG Q+A EL+N+ + ++W +LL AC N L + ++ L+ P +
Sbjct: 592 QAGLFQEANELINKMPLEP----DKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPS 647
Query: 426 ICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWV 464
+ LSN YA GMWD++ +R K+ G K+ G SW+
Sbjct: 648 VYTSLSNAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 162/353 (45%), Gaps = 29/353 (8%)
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F M N + +N +IS F KG P AL M + LD +AL L A S
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFALPCGLKACSFGGL 253
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVF--DEIPEKNTVCA-NAL 179
+ GKQ+H V K G SS F SAL+D+YS S+ AA VF +++ ++V N++
Sbjct: 254 LTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSM 313
Query: 180 LSGY-----GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYV 234
LSG+ EA LW L+ ++ L +D +TLS AL+ C + LG Q+HS V
Sbjct: 314 LSGFLINEENEAALW-----LLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLV 368
Query: 235 LRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYG 294
+ + +++ D + S L++++ G ++ A ++F ++D++ ++ ++
Sbjct: 369 VVSGYEL--DYIVGSILVDLHANVGNIQDAHKLF-------HRLPNKDIIAFSGLIRGCV 419
Query: 295 RNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGP 354
++G LF+E+++ G+ D ++ C + G K + + P
Sbjct: 420 KSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWG-KQIHGLCIKKGYESEP 478
Query: 355 EHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
+ LVD+ + GE+ L+ GM + W ++ G +E
Sbjct: 479 VTATALVDMYVKCGEIDNG-----VVLFDGMLERDVVSWTGIIVGFGQNGRVE 526
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 141/326 (43%), Gaps = 43/326 (13%)
Query: 105 LDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALV 164
+D + + L +V G+ I AHV K G S +VF+ + ++ +Y + DA V
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 165 FDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM-PVLRLKYDQFTLSAALRACTGLSA 223
FDE+ E+N V ++SGY G + +EL R+M ++F SA L+AC +
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 224 VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
++LG ++ + + ++ DV L +S+++MY K G + +A FK E S
Sbjct: 123 IQLGILVYERIGK--ENLRGDVVLMNSVVDMYVKNGRLIEANSSFK----EILRPSSTS- 175
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLE------------------------------EG 313
W +++ Y + G E + LF M + EG
Sbjct: 176 --WNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREG 233
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
+ DG A + AC G + G K + L P S L+D+ G L A
Sbjct: 234 LVLDGFALPCGLKACSFGGLLTMG-KQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYA 292
Query: 374 WELLNQTLYKGMGNCTISMWGALLNA 399
++ +Q K N ++++W ++L+
Sbjct: 293 ADVFHQE--KLAVNSSVAVWNSMLSG 316
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 156/383 (40%), Gaps = 51/383 (13%)
Query: 57 LQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFM-HTNNVPLDTYALCSTLT 115
L H F M+ N + + ++S + G P A+ + M + + + + L
Sbjct: 56 LSDAHKVFDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLK 115
Query: 116 ASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEI------- 168
A V D+ G ++ +GK V + +++VD+Y K + +A F EI
Sbjct: 116 ACGLVGDIQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTS 175
Query: 169 ------------------------PEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRL 204
P+ N V N L+SG+ + G + LE + +M L
Sbjct: 176 WNTLISGYCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGS-PRALEFLVRMQREGL 234
Query: 205 KYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKA 264
D F L L+AC+ + +G+QLH V+++ +ES F S+LI+MY CG + A
Sbjct: 235 VLDGFALPCGLKACSFGGLLTMGKQLHCCVVKS--GLESSPFAISALIDMYSNCGSLIYA 292
Query: 265 QQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTV 324
VF + + + V +W SML + N + + + L ++ + + D
Sbjct: 293 ADVFH----QEKLAVNSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGA 348
Query: 325 ISACGHTGQVHAGVKYFESM---SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTL 381
+ C + + G++ + E G S LVDL G +Q A +L ++
Sbjct: 349 LKICINYVNLRLGLQVHSLVVVSGYELDYIVG----SILVDLHANVGNIQDAHKLFHR-- 402
Query: 382 YKGMGNCTISMWGALLNACVDCG 404
+ N I + L+ CV G
Sbjct: 403 ---LPNKDIIAFSGLIRGCVKSG 422
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/424 (29%), Positives = 220/424 (51%), Gaps = 17/424 (4%)
Query: 42 TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN 101
T+L+ AY+ C L + + + + I+S + KG +A+ FS
Sbjct: 285 TSLVCAYSRC---GCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQL 341
Query: 102 NVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
+ +D AL L + + ++ G +H + K G + V + L+ +YSK V+
Sbjct: 342 CMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETV 401
Query: 162 ALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR-LKYDQFTLSAALRACTG 220
+F+++ E + N+++SG ++G + E+ +M + L D T+++ L C+
Sbjct: 402 LFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQ 461
Query: 221 LSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS 280
L + LG++LH Y LR ++ E++ F+ ++LI+MY KCG +A+ VFK + ++
Sbjct: 462 LCCLNLGKELHGYTLR--NNFENENFVCTALIDMYAKCGNEVQAESVFK-------SIKA 512
Query: 281 RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKY 340
W SM+ Y +G + + EM E+G++PD I FL V+SAC H G V G
Sbjct: 513 PCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKIC 572
Query: 341 FESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNAC 400
F +M EF ++P +HY+ +V LL RA +A L+ + K ++WGALL+AC
Sbjct: 573 FRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDS----AVWGALLSAC 628
Query: 401 VDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVG 460
+ +E+G+ ++ LD N G+ +L+SNLYA MWD++ +R ++K+ G +G
Sbjct: 629 IIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLG 688
Query: 461 CSWV 464
S +
Sbjct: 689 VSQI 692
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/402 (20%), Positives = 175/402 (43%), Gaps = 32/402 (7%)
Query: 2 SNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLH 61
+ +++ L C +S + +HG ++G L + LI+ Y+ C + L
Sbjct: 151 ATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG-LELDSQVKNALISFYSKCAELGSAEVL- 208
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
F+ M + + +N +I + + G A+T F M NV + + + L+A
Sbjct: 209 --FREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS-- 264
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
+ +H V K G + + V ++LV YS+ + A ++ + + V +++S
Sbjct: 265 ----HEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVS 320
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
Y E G + K L +K D L L C S +++G LH Y +++ +
Sbjct: 321 CYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKS--GL 378
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
+ + + LI MY K V+ +F+ + ++ W S++ ++G+
Sbjct: 379 CTKTLVVNGLITMYSKFDDVETVLFLFE-------QLQETPLISWNSVISGCVQSGRAST 431
Query: 302 VIDLFKE-MLEEGIRPDGIAFLTVISACGHTGQVHAGVK-YFESMSNEFKLNPGPEHYSC 359
++F + ML G+ PD I ++++ C ++ G + + ++ N F+ E++ C
Sbjct: 432 AFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFE----NENFVC 487
Query: 360 --LVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
L+D+ + G E+ ++++K + + W ++++
Sbjct: 488 TALIDMYAKCGN-----EVQAESVFKSIKAPCTATWNSMISG 524
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/318 (20%), Positives = 142/318 (44%), Gaps = 19/318 (5%)
Query: 21 IKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIIS 80
++++ +L ++G F++ + T+L+ Y L K + + F M + + +N +I
Sbjct: 69 VEQVQTHLTKSGLDRFVY-VKTSLLNLY---LKKGCVTSAQMLFDEMPERDTVVWNALIC 124
Query: 81 NFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSS 140
+ R G+ A F M L + L + V+ G+ +H K G
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL 184
Query: 141 SVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMP 200
V +AL+ YSK + + A ++F E+ +K+TV N ++ Y ++GL + + + + M
Sbjct: 185 DSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNM- 243
Query: 201 VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGL 260
+++ + + LSA LH V++ + +D+ + +SL+ Y +CG
Sbjct: 244 -----FEKNVEISPVTIINLLSAHVSHEPLHCLVVKC--GMVNDISVVTSLVCAYSRCGC 296
Query: 261 VKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIA 320
+ A++++ + + +V TS++ Y G + F + + ++ D +A
Sbjct: 297 LVSAERLYA-------SAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVA 349
Query: 321 FLTVISACGHTGQVHAGV 338
+ ++ C + + G+
Sbjct: 350 LVGILHGCKKSSHIDIGM 367
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 229/459 (49%), Gaps = 18/459 (3%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L C + LHG ++ +G LF+ + L++ Y + M
Sbjct: 369 LAACFTPDFFEKGRILHGLVVVSG-LFYNQIIGNALVSMYGKI---GEMSESRRVLLQMP 424
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV-NFGK 127
+ + +N +I + P AL AF M V + + S L+A D+ GK
Sbjct: 425 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 484
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
+HA++ G+ S V ++L+ +Y+K + + +F+ + +N + NA+L+ G
Sbjct: 485 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHG 544
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
+ L+LV KM + DQF+ S L A L+ +E G+QLH ++ E D F+
Sbjct: 545 HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL--GFEHDSFI 602
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
++ +MY KCG + + ++ +R + W ++ GR+G ++EV F
Sbjct: 603 FNAAADMYSKCGEIGEVVKMLP-------PSVNRSLPSWNILISALGRHGYFEEVCATFH 655
Query: 308 EMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRA 367
EMLE GI+P + F+++++AC H G V G+ Y++ ++ +F L P EH C++DLL R+
Sbjct: 656 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 715
Query: 368 GELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGIC 427
G L +A +++ K +W +LL +C GN++ G+ A + +L+P + +
Sbjct: 716 GRLAEAETFISKMPMKP----NDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVY 771
Query: 428 ILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+L SN++A G W+++ ++R + + ++K CSWV++
Sbjct: 772 VLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKL 810
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 184/405 (45%), Gaps = 18/405 (4%)
Query: 3 NSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHN 62
NS+ + C + K+ S +++ G ++++G L + +LI+ + ++ +
Sbjct: 161 NSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA-VENSLISMLGSM---GNVDYANY 216
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F M+ + + +N I + + + G + FS M + +++ + + L+ V+
Sbjct: 217 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDH 276
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+G+ IH V K+G+ S V V + L+ +Y+ +A LVF ++P K+ + N+L++
Sbjct: 277 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMAS 336
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
+ G L L+ M + T ++AL AC E GR LH V+ +
Sbjct: 337 FVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV--VSGLF 394
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
+ + ++L+ MYGK G + ++++V RDVV W +++G Y + +
Sbjct: 395 YNQIIGNALVSMYGKIGEMSESRRVL-------LQMPRRDVVAWNALIGGYAEDEDPDKA 447
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVD 362
+ F+ M EG+ + I ++V+SAC G + K + + L+
Sbjct: 448 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 507
Query: 363 LLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
+ + G+L + Q L+ G+ N I W A+L A G+ E
Sbjct: 508 MYAKCGDLSSS-----QDLFNGLDNRNIITWNAMLAANAHHGHGE 547
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 103/180 (57%), Gaps = 10/180 (5%)
Query: 151 LYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFT 210
+Y+K VK A +FD +P +N V N ++SG GL+ +G+E RKM L +K F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 211 LSAALRAC-TGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFK 269
+++ + AC S G Q+H +V ++ + SDV++ ++++ +YG GLV +++VF+
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKS--GLLSDVYVSTAILHLYGVYGLVSCSRKVFE 118
Query: 270 LDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG 329
R+VV WTS++ Y G+ +EVID++K M EG+ + + VIS+CG
Sbjct: 119 -------EMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCG 171
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 16/280 (5%)
Query: 53 PKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCS 112
P HL F M N + +N ++S R G + F M + ++ + S
Sbjct: 10 PARHL------FDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIAS 63
Query: 113 TLTASSRVNDV-NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK 171
+TA R + G Q+H V K G S V+V +A++ LY V + VF+E+P++
Sbjct: 64 LVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR 123
Query: 172 NTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLH 231
N V +L+ GY + G + +++ + M + ++ ++S + +C L LGRQ+
Sbjct: 124 NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQII 183
Query: 232 SYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
V+++ +ES + +++SLI M G G V A +F RD + W S+
Sbjct: 184 GQVVKS--GLESKLAVENSLISMLGSMGNVDYANYIFD-------QMSERDTISWNSIAA 234
Query: 292 VYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHT 331
Y +NG +E +F M + T++S GH
Sbjct: 235 AYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHV 274
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 122/265 (46%), Gaps = 9/265 (3%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F+ M N + + ++ + KG P + + M V + ++ +++ + D
Sbjct: 117 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 176
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
+ G+QI V K G S + V ++L+ + + +V A +FD++ E++T+ N++ + Y
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 236
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+ G + + M + + T+S L + + GR +H V++ D S
Sbjct: 237 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD--S 294
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
V + ++L+ MY G +A VFK ++D++ W S++ + +G+ + +
Sbjct: 295 VVCVCNTLLRMYAGAGRSVEANLVFK-------QMPTKDLISWNSLMASFVNDGRSLDAL 347
Query: 304 DLFKEMLEEGIRPDGIAFLTVISAC 328
L M+ G + + F + ++AC
Sbjct: 348 GLLCSMISSGKSVNYVTFTSALAAC 372
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
MY K G VK A+ +F D + RNE V W +M+ R G Y E ++ F++M + G
Sbjct: 1 MYTKFGRVKPARHLF--DIMPVRNE-----VSWNTMMSGIVRVGLYLEGMEFFRKMCDLG 53
Query: 314 IRPDGIAFLTVISACGHTGQV 334
I+P ++++ACG +G +
Sbjct: 54 IKPSSFVIASLVTACGRSGSM 74
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 229/459 (49%), Gaps = 18/459 (3%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L C + LHG ++ +G LF+ + L++ Y + M
Sbjct: 352 LAACFTPDFFEKGRILHGLVVVSG-LFYNQIIGNALVSMYGKI---GEMSESRRVLLQMP 407
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV-NFGK 127
+ + +N +I + P AL AF M V + + S L+A D+ GK
Sbjct: 408 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGK 467
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
+HA++ G+ S V ++L+ +Y+K + + +F+ + +N + NA+L+ G
Sbjct: 468 PLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHG 527
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
+ L+LV KM + DQF+ S L A L+ +E G+QLH ++ E D F+
Sbjct: 528 HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL--GFEHDSFI 585
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
++ +MY KCG + + ++ +R + W ++ GR+G ++EV F
Sbjct: 586 FNAAADMYSKCGEIGEVVKMLP-------PSVNRSLPSWNILISALGRHGYFEEVCATFH 638
Query: 308 EMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRA 367
EMLE GI+P + F+++++AC H G V G+ Y++ ++ +F L P EH C++DLL R+
Sbjct: 639 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 698
Query: 368 GELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGIC 427
G L +A +++ K +W +LL +C GN++ G+ A + +L+P + +
Sbjct: 699 GRLAEAETFISKMPMK----PNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVY 754
Query: 428 ILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+L SN++A G W+++ ++R + + ++K CSWV++
Sbjct: 755 VLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKL 793
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 184/405 (45%), Gaps = 18/405 (4%)
Query: 3 NSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHN 62
NS+ + C + K+ S +++ G ++++G L + +LI+ + ++ +
Sbjct: 144 NSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLA-VENSLISMLGSM---GNVDYANY 199
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F M+ + + +N I + + + G + FS M + +++ + + L+ V+
Sbjct: 200 IFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDH 259
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+G+ IH V K+G+ S V V + L+ +Y+ +A LVF ++P K+ + N+L++
Sbjct: 260 QKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMAS 319
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
+ G L L+ M + T ++AL AC E GR LH V+ +
Sbjct: 320 FVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVV--VSGLF 377
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
+ + ++L+ MYGK G + ++++V RDVV W +++G Y + +
Sbjct: 378 YNQIIGNALVSMYGKIGEMSESRRVL-------LQMPRRDVVAWNALIGGYAEDEDPDKA 430
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVD 362
+ F+ M EG+ + I ++V+SAC G + K + + L+
Sbjct: 431 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 490
Query: 363 LLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
+ + G+L + Q L+ G+ N I W A+L A G+ E
Sbjct: 491 MYAKCGDLSSS-----QDLFNGLDNRNIITWNAMLAANAHHGHGE 530
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 10/266 (3%)
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV-NF 125
M N + +N ++S R G + F M + ++ + S +TA R +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
G Q+H V K G S V+V +A++ LY V + VF+E+P++N V +L+ GY +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
G + +++ + M + ++ ++S + +C L LGRQ+ V+++ +ES +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS--GLESKL 178
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
+++SLI M G G V A +F RD + W S+ Y +NG +E +
Sbjct: 179 AVENSLISMLGSMGNVDYANYIFD-------QMSERDTISWNSIAAAYAQNGHIEESFRI 231
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHT 331
F M + T++S GH
Sbjct: 232 FSLMRRFHDEVNSTTVSTLLSVLGHV 257
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 122/265 (46%), Gaps = 9/265 (3%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F+ M N + + ++ + KG P + + M V + ++ +++ + D
Sbjct: 100 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 159
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
+ G+QI V K G S + V ++L+ + + +V A +FD++ E++T+ N++ + Y
Sbjct: 160 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAY 219
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+ G + + M + + T+S L + + GR +H V++ D S
Sbjct: 220 AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFD--S 277
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
V + ++L+ MY G +A VFK ++D++ W S++ + +G+ + +
Sbjct: 278 VVCVCNTLLRMYAGAGRSVEANLVFK-------QMPTKDLISWNSLMASFVNDGRSLDAL 330
Query: 304 DLFKEMLEEGIRPDGIAFLTVISAC 328
L M+ G + + F + ++AC
Sbjct: 331 GLLCSMISSGKSVNYVTFTSALAAC 355
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 142/466 (30%), Positives = 232/466 (49%), Gaps = 35/466 (7%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCM 67
L C L +K +H ++ + G ++ + LI Y+ C ++ F+ M
Sbjct: 123 LLKACSGQSWLPVVKMMHNHIEKLGLSSDIY-VPNALIDCYSRCGGLG-VRDAMKLFEKM 180
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN-----NVPLDTYALCSTLTASSRVND 122
+ + + +N ++ + G A F M N LD YA C ++ + +
Sbjct: 181 SERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFEL-- 238
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDE--IPEKNTVCANALL 180
F K + + WS+ V YSK ++ A ++FD+ +P KN V ++
Sbjct: 239 --FEKMPERNT--VSWSTMVMG-------YSKAGDMEMARVMFDKMPLPAKNVVTWTIII 287
Query: 181 SGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD 240
+GY E GL + LV +M LK+D + + L ACT + LG ++HS + R+ +
Sbjct: 288 AGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRS--N 345
Query: 241 IESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
+ S+ ++ ++L++MY KCG +KKA VF + +D+V W +ML G +G K
Sbjct: 346 LGSNAYVLNALLDMYAKCGNLKKAFDVFN-------DIPKKDLVSWNTMLHGLGVHGHGK 398
Query: 301 EVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL 360
E I+LF M EGIRPD + F+ V+ +C H G + G+ YF SM + L P EHY CL
Sbjct: 399 EAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCL 458
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELD 420
VDLL R G L++A +++ QT+ + +WGALL AC +++ K ++LD
Sbjct: 459 VDLLGRVGRLKEAIKVV-QTMPM---EPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLD 514
Query: 421 PHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
P + G LLSN+YA W+ + +R +K G+ K G S V++
Sbjct: 515 PCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVEL 560
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 181/392 (46%), Gaps = 45/392 (11%)
Query: 6 IQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLH-DLH--TNLIAAYATCLPKNHLQTLHN 62
+Q L +C NL+ +K+LH ++R LH DLH LI+A + C N + N
Sbjct: 23 LQDLPKC---ANLNQVKQLHAQIIRRN----LHEDLHIAPKLISALSLCRQTNLAVRVFN 75
Query: 63 FFKCMNSTNPLHF-NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
+ N +H N +I + P+ A FS M + D + L A S +
Sbjct: 76 QVQEPN----VHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQS 131
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLS--SVKDAALVFDEIPEKNTVCANAL 179
+ K +H H+ KLG SS ++V +AL+D YS+ V+DA +F+++ E++TV N++
Sbjct: 132 WLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSM 191
Query: 180 LSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTH 239
L G +AG L +MP L L R A EL ++
Sbjct: 192 LGGLVKAGELRDARRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMP-------- 243
Query: 240 DIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKY 299
E + S+++ Y K G ++ A+ +F + ++N VV WT ++ Y G
Sbjct: 244 --ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKN-----VVTWTIIIAGYAEKGLL 296
Query: 300 KEVIDLFKEMLEEGIRPDGIAFLTVISACGHTG------QVHAGVKYFESMSNEFKLNPG 353
KE L +M+ G++ D A +++++AC +G ++H+ +K SN + LN
Sbjct: 297 KEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLN-- 354
Query: 354 PEHYSCLVDLLCRAGELQKAWELLNQTLYKGM 385
L+D+ + G L+KA+++ N K +
Sbjct: 355 -----ALLDMYAKCGNLKKAFDVFNDIPKKDL 381
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 143/500 (28%), Positives = 244/500 (48%), Gaps = 56/500 (11%)
Query: 5 IIQFLHQ---CHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNH-LQTL 60
I +LHQ C + L+ K LH ++++ G + L L+ Y C +H LQ
Sbjct: 3 IPHYLHQLQLCARNRTLTTAKALHAHIVKLGIVQCC-PLANTLVNVYGKCGAASHALQV- 60
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNN-VPLDTYALCSTLTASSR 119
F M + + + +++ + L+ FS + +++ + D + + + A +
Sbjct: 61 ---FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACAN 117
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANAL 179
+ ++ G+Q+H H +++ V S+LVD+Y+K + A VFD I KNT+ A+
Sbjct: 118 LGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAM 177
Query: 180 LSGYGEAGLWAQGLELVRKMPVLRLK--------------------------------YD 207
+SGY ++G + LEL R +PV L D
Sbjct: 178 VSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILD 237
Query: 208 QFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQV 267
LS+ + AC L+A GRQ+H V+ D S VF+ ++LI+MY KC V A+ +
Sbjct: 238 PLVLSSIVGACANLAASIAGRQVHGLVIALGFD--SCVFISNALIDMYAKCSDVIAAKDI 295
Query: 268 FKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISA 327
F R RDVV WTS++ ++G+ ++ + L+ +M+ G++P+ + F+ +I A
Sbjct: 296 FS-------RMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYA 348
Query: 328 CGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGN 387
C H G V G + F+SM+ ++ + P +HY+CL+DLL R+G L +A L++ +
Sbjct: 349 CSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPP--- 405
Query: 388 CTISMWGALLNACVDCGNIELG-KLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHL 446
W ALL+AC G ++G ++A + ILLSN+YA +W ++
Sbjct: 406 -DEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEA 464
Query: 447 RVVIKERGLRKDVGCSWVQV 466
R + E +RKD G S V+V
Sbjct: 465 RRKLGEMEVRKDPGHSSVEV 484
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 199 bits (506), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 126/418 (30%), Positives = 219/418 (52%), Gaps = 23/418 (5%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMN--STNPLHFNVIISNFCRKGFPFLALTAFSF 97
+ + L+ YA+C + + H F M+ ++P +N +IS + G A+ +
Sbjct: 129 ISSKLVRLYASC---GYAEVAHEVFDRMSKRDSSPFAWNSLISGYAELGQYEDAMALYFQ 185
Query: 98 MHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSS 157
M + V D + L A + V G+ IH + K G+ V+V +ALV +Y+K
Sbjct: 186 MAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGD 245
Query: 158 VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRA 217
+ A VFD IP K+ V N++L+GY GL + L++ R M ++ D+ +S+ L
Sbjct: 246 IVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLAR 305
Query: 218 CTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRN 277
GRQLH +V+R +E ++ + ++LI +Y K G + +A +F
Sbjct: 306 VLSFKH---GRQLHGWVIR--RGMEWELSVANALIVLYSKRGQLGQACFIFD-------Q 353
Query: 278 ERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
RD V W +++ + +N + F++M +PDGI F++V+S C +TG V G
Sbjct: 354 MLERDTVSWNAIISAHSKNSN---GLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDG 410
Query: 338 VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
+ F MS E+ ++P EHY+C+V+L RAG +++A+ ++ Q + G ++WGALL
Sbjct: 411 ERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGP---TVWGALL 467
Query: 398 NACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGL 455
AC GN ++G++A QR EL+P N LL +Y++ +++ +R ++ +RGL
Sbjct: 468 YACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 180/396 (45%), Gaps = 84/396 (21%)
Query: 110 LCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIP 169
S L + ++ G ++H + +++ + S LV LY+ + A VFD +
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 170 EKNT--VCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELG 227
++++ N+L+SGY E G + + L +M +K D+FT L+AC G+ +V++G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 228 RQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWT 287
+H +++ DV++ ++L+ MY KCG + KA+ VF + +D V W
Sbjct: 215 EAIHRDLVK--EGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIP-------HKDYVSWN 265
Query: 288 SMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVIS---ACGHTGQVHA-----GVK 339
SML Y +G E +D+F+ M++ GI PD +A +V++ + H Q+H G++
Sbjct: 266 SMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVLARVLSFKHGRQLHGWVIRRGME 325
Query: 340 YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
+ S++N L+ L + G+L +A + +Q L + T+S W A+++A
Sbjct: 326 WELSVAN------------ALIVLYSKRGQLGQACFIFDQMLERD----TVS-WNAIISA 368
Query: 400 --------------------------------CVDCGNIELGKLAGQRALELDPHNAGI- 426
C + G +E G+R L GI
Sbjct: 369 HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVE----DGERLFSLMSKEYGID 424
Query: 427 -------CILLSNLYARFGMWDEIGHLRVVIKERGL 455
C++ NLY R GM +E ++++E GL
Sbjct: 425 PKMEHYACMV--NLYGRAGMMEEA--YSMIVQEMGL 456
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 230/452 (50%), Gaps = 23/452 (5%)
Query: 21 IKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHL--QTLHNFFKCMNSTNPLHFNVI 78
IK+LH + G D ++++ A+ T K L + + F+ + + +N +
Sbjct: 157 IKQLHCFSVSGG-----FDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSM 211
Query: 79 ISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGW 138
I + + AL + M +D + L S L A + ++ + G+Q H + K G+
Sbjct: 212 IVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGF 271
Query: 139 SSSVFVGSALVDLYSKL---SSVKDAALVFDEIPEKNTVCANALLSGYG-EAGLWAQGLE 194
+ VGS L+D YSK + D+ VF EI + V N ++SGY L + ++
Sbjct: 272 HQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAVK 331
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
R+M + + D + AC+ LS+ +Q+H +++ H + + + ++LI +
Sbjct: 332 SFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKS-HIPSNRISVNNALISL 390
Query: 255 YGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGI 314
Y K G ++ A+ VF D + N V + M+ Y ++G E + L++ ML+ GI
Sbjct: 391 YYKSGNLQDARWVF--DRMPELN-----AVSFNCMIKGYAQHGHGTEALLLYQRMLDSGI 443
Query: 315 RPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAW 374
P+ I F+ V+SAC H G+V G +YF +M FK+ P EHYSC++DLL RAG+L++A
Sbjct: 444 APNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAE 503
Query: 375 ELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLY 434
++ YK G+ W ALL AC N+ L + A + + P A ++L+N+Y
Sbjct: 504 RFIDAMPYKP-GSVA---WAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMY 559
Query: 435 ARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
A W+E+ +R ++ + +RK GCSW++V
Sbjct: 560 ADARKWEEMASVRKSMRGKRIRKKPGCSWIEV 591
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/403 (25%), Positives = 175/403 (43%), Gaps = 51/403 (12%)
Query: 44 LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNV 103
++ AYA + + F + + + +N +IS + F A+ F M
Sbjct: 80 IVKAYAK---DSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGF 136
Query: 104 PLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAAL 163
+D + L + A + V+ KQ+H G+ S V +A V YSK +++A
Sbjct: 137 EVDGFTLSGLIAAC--CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVS 194
Query: 164 VFDEIPE-KNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS 222
VF + E ++ V N+++ YG+ A+ L L ++M K D FTL++ L A T L
Sbjct: 195 VFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLD 254
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG---LVKKAQQVFKLDGVESRNER 279
+ GRQ H +++ S V S LI+ Y KCG + +++VF+
Sbjct: 255 HLIGGRQFHGKLIKAGFHQNSHV--GSGLIDFYSKCGGCDGMYDSEKVFQ-------EIL 305
Query: 280 SRDVVLWTSMLGVYGRNGKY-KEVIDLFKEMLEEGIRPDGIAFLTVISACGHTG------ 332
S D+V+W +M+ Y N + +E + F++M G RPD +F+ V SAC +
Sbjct: 306 SPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCK 365
Query: 333 QVHAGVKYFESMSNEFKLNPG---------------------PE----HYSCLVDLLCRA 367
Q+H SN +N PE ++C++ +
Sbjct: 366 QIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQH 425
Query: 368 GELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGK 410
G +A L + L G+ I+ + A+L+AC CG ++ G+
Sbjct: 426 GHGTEALLLYQRMLDSGIAPNKIT-FVAVLSACAHCGKVDEGQ 467
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 102/187 (54%), Gaps = 10/187 (5%)
Query: 141 SVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMP 200
+VF + +V Y+K S + A +FDEIP+ +TV N L+SGY +A + L ++M
Sbjct: 73 NVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMR 132
Query: 201 VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGL 260
L + D FTLS + AC V+L +QLH + + D S V ++ + Y K GL
Sbjct: 133 KLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSV--NNAFVTYYSKGGL 188
Query: 261 VKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIA 320
+++A VF G++ RD V W SM+ YG++ + + + L+KEM+ +G + D
Sbjct: 189 LREAVSVFY--GMDEL----RDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFT 242
Query: 321 FLTVISA 327
+V++A
Sbjct: 243 LASVLNA 249
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 229/466 (49%), Gaps = 26/466 (5%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L C +++ +HG +++TG ++ + T L+ Y C N+ + F+ +
Sbjct: 114 LKACSGLRDIQFGSCVHGFVVKTGFEVNMY-VSTCLLHMYMCCGEVNYGLRV---FEDIP 169
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
N + + +IS F A+ AF M +N V + + L A R D+ GK
Sbjct: 170 QWNVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKW 229
Query: 129 IHAHVGKLGWSS--------SVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALL 180
H + LG+ +V + ++L+D+Y+K ++ A +FD +PE+ V N+++
Sbjct: 230 FHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSII 289
Query: 181 SGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD 240
+GY + G + L + M L + D+ T + +RA +LG+ +H+YV +T
Sbjct: 290 TGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKT--G 347
Query: 241 IESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
D + +L+ MY K G + A++ F+ + +D + WT ++ +G
Sbjct: 348 FVKDAAIVCALVNMYAKTGDAESAKKAFE-------DLEKKDTIAWTVVIIGLASHGHGN 400
Query: 301 EVIDLFKEMLEEG-IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSC 359
E + +F+ M E+G PDGI +L V+ AC H G V G +YF M + L P EHY C
Sbjct: 401 EALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGC 460
Query: 360 LVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALEL 419
+VD+L RAG ++A L+ K +++WGALLN C N+EL E
Sbjct: 461 MVDILSRAGRFEEAERLVKTMPVKP----NVNIWGALLNGCDIHENLELTDRIRSMVAEP 516
Query: 420 DPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
+ +GI +LLSN+YA+ G W ++ +R +K + + K +G S V+
Sbjct: 517 EELGSGIYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/342 (27%), Positives = 164/342 (47%), Gaps = 20/342 (5%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L Q ++L + +LHG ++++ + + L + LI TC +L + F+ ++
Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPL-SRLIDFCTTCPETMNLSYARSVFESID 68
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
+ +N +I + P AL + M D + L A S + D+ FG
Sbjct: 69 CPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSC 128
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGL 188
+H V K G+ +++V + L+ +Y V VF++IP+ N V +L+SG+
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNR 188
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD------IE 242
++ +E R+M +K ++ + L AC + G+ H ++ D +
Sbjct: 189 FSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVG 248
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
+V L +SLI+MY KCG ++ A+ +F DG+ R +V W S++ Y +NG +E
Sbjct: 249 FNVILATSLIDMYAKCGDLRTARYLF--DGMPERT-----LVSWNSIITGYSQNGDAEEA 301
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISA-----CGHTGQ-VHAGV 338
+ +F +ML+ GI PD + FL+VI A C GQ +HA V
Sbjct: 302 LCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYV 343
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 135/487 (27%), Positives = 237/487 (48%), Gaps = 53/487 (10%)
Query: 10 HQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNS 69
HQC K++S + K+H L+ G + + +++ + + F ++
Sbjct: 16 HQC---KSMSELYKIHTLLITLG--LSEEEPFVSQTLSFSALSSSGDVDYAYKFLSKLSD 70
Query: 70 TNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQI 129
+N +I F P +++ + M + D + +SSR+++ G +
Sbjct: 71 PPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSL 130
Query: 130 HAHVGKLGWSSSVFVGSALV-------------------------------DLYSKLSSV 158
H V K G +F+ + L+ D Y+K V
Sbjct: 131 HCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDV 190
Query: 159 KDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRL---KYDQFTLSAAL 215
A LVFDE+ E++ V ++++ GY + G + + LE+ +M +R+ K ++ T+ + +
Sbjct: 191 VSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQM--MRMGSSKANEVTMVSVI 248
Query: 216 RACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVES 275
AC L A+ G+ +H Y+L + V LQ+SLI+MY KCG + A VF V
Sbjct: 249 CACAHLGALNRGKTVHRYILDV--HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASV-- 304
Query: 276 RNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVH 335
+ D ++W +++G +G +E + LF +M E I PD I FL +++AC H G V
Sbjct: 305 ---KETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVK 361
Query: 336 AGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGA 395
+F+S+ E P EHY+C+VD+L RAG ++ A + +++ K G SM GA
Sbjct: 362 EAWHFFKSL-KESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTG----SMLGA 416
Query: 396 LLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGL 455
LLN C++ GN+EL + G++ +EL PHN G + L+N+YA + +R ++++G+
Sbjct: 417 LLNGCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGV 476
Query: 456 RKDVGCS 462
+K G S
Sbjct: 477 KKIAGHS 483
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 216/437 (49%), Gaps = 18/437 (4%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNF 63
S I L C +S + LHG LR+G + F DL LI Y C + + + F
Sbjct: 127 SFITTLKSCSRELCVSIGEGLHGIALRSGFMVF-TDLRNALIHFYCVCGKISDARKV--F 183
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
+ S + + F+ +++ + + LAL F M + V ++ L S L+A S + D+
Sbjct: 184 DEMPQSVDAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDL 243
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
+ + H K+G + + +AL+ +Y K + A +FD K+ V N ++ Y
Sbjct: 244 SGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQY 303
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+ GL + + L+R+M ++K + T L +C A +GR + L I
Sbjct: 304 AKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD--LLEEERIAL 361
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
D L ++L++MY K GL++KA ++F + +DV WT+M+ YG +G +E +
Sbjct: 362 DAILGTALVDMYAKVGLLEKAVEIFN-------RMKDKDVKSWTAMISGYGAHGLAREAV 414
Query: 304 DLFKEMLEEG--IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
LF +M EE +RP+ I FL V++AC H G V G++ F+ M + P EHY C+V
Sbjct: 415 TLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVV 474
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDP 421
DLL RAG+L++A+EL+ + W ALL AC GN +LG+ R E+
Sbjct: 475 DLLGRAGQLEEAYELIRNLPITSDS----TAWRALLAACRVYGNADLGESVMMRLAEMGE 530
Query: 422 HNAGICILLSNLYARFG 438
+ ILL+ +A G
Sbjct: 531 THPADAILLAGTHAVAG 547
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 189/395 (47%), Gaps = 24/395 (6%)
Query: 5 IIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFF 64
+I L C T +S ++HG +++TG D + + A+++ L + ++ F
Sbjct: 31 LINDLRSCRDTVEVS---RIHGYMVKTG--LDKDDFAVSKLLAFSSVLDIRYASSI---F 82
Query: 65 KCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVN 124
+ +++TN FN +I + P A + F+ + + LD ++ +TL + SR V+
Sbjct: 83 EHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVS 142
Query: 125 FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK-NTVCANALLSGY 183
G+ +H + G+ + +AL+ Y + DA VFDE+P+ + V + L++GY
Sbjct: 143 IGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGY 202
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+ A L+L R M + + TL + L A + L + H ++ D+
Sbjct: 203 LQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDL-- 260
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
D+ L ++LI MYGK G + A+++F +DVV W M+ Y + G +E +
Sbjct: 261 DLHLITALIGMYGKTGGISSARRIFDC-------AIRKDVVTWNCMIDQYAKTGLLEECV 313
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
L ++M E ++P+ F+ ++S+C ++ G + + E ++ + LVD+
Sbjct: 314 WLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVG-RTVADLLEEERIALDAILGTALVDM 372
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLN 398
+ G L+KA E+ N+ M + + W A+++
Sbjct: 373 YAKVGLLEKAVEIFNR-----MKDKDVKSWTAMIS 402
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 195 bits (495), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 243/463 (52%), Gaps = 38/463 (8%)
Query: 12 CHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTN 71
CH T +L +++HG ++ G L ++ L++ Y+ C L+ + + F M+ N
Sbjct: 287 CHET-DLKLARQIHGLCIKRGYESLL-EVGNILMSRYSKC---GVLEAVKSVFHQMSERN 341
Query: 72 PLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHA 131
+ + +IS+ F ++ N V L + + + ++ + G +IH
Sbjct: 342 VVSWTTMISSNKDDAVSIFLNMRFDGVYPNEVTF--VGLINAVKCNEQIKE---GLKIHG 396
Query: 132 HVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQ 191
K G+ S VG++ + LY+K +++DA F++I + + NA++SG+ + G +
Sbjct: 397 LCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGFSHE 456
Query: 192 GLEL-----VRKMPVLRLKYDQFTLSAALRACTGLS--AVELGRQLHSYVLRTTHDIESD 244
L++ MP +++T + L A +V+ G++ H+++L+ + S
Sbjct: 457 ALKMFLSAAAETMP------NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL--GLNSC 508
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS-RDVVLWTSMLGVYGRNGKYKEVI 303
+ S+L++MY K G + ++++VF NE S ++ +WTS++ Y +G ++ V+
Sbjct: 509 PVVSSALLDMYAKRGNIDESEKVF--------NEMSQKNQFVWTSIISAYSSHGDFETVM 560
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
+LF +M++E + PD + FL+V++AC G V G + F M + L P EHYSC+VD+
Sbjct: 561 NLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDM 620
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHN 423
L RAG L++A EL+++ G SM ++L +C GN+++G + A+E+ P
Sbjct: 621 LGRAGRLKEAEELMSEVP----GGPGESMLQSMLGSCRLHGNVKMGAKVAELAMEMKPEL 676
Query: 424 AGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+G + + N+YA WD+ +R ++++ + K+ G SW+ V
Sbjct: 677 SGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDV 719
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 130/261 (49%), Gaps = 28/261 (10%)
Query: 79 ISNFCRKGFPFLALTAFSFMHTNNVPL-------DTYALCSTLTASSRVNDVNFGKQIHA 131
IS R+ P AL+ F N+ L D LC L A D+ G QIH
Sbjct: 47 ISESLRRNSPARALSIFK----ENLQLGYFGRHMDEVTLCLALKACR--GDLKRGCQIHG 100
Query: 132 HVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQ 191
G++S V V +A++ +Y K +A +F+ + + + V N +LSG+ + +
Sbjct: 101 FSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSWNTILSGFDDNQI--- 157
Query: 192 GLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSL 251
L V +M + +D FT S AL C G LG QL S V++T +ESD+ + +S
Sbjct: 158 ALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKT--GLESDLVVGNSF 215
Query: 252 IEMYGKCGLVKKAQQVFKLDGVESRNERS-RDVVLWTSMLGVYGRNGKYK-EVIDLFKEM 309
I MY + G + A++VF +E S +D++ W S+L + G + E + +F++M
Sbjct: 216 ITMYSRSGSFRGARRVF--------DEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDM 267
Query: 310 LEEGIRPDGIAFLTVISACGH 330
+ EG+ D ++F +VI+ C H
Sbjct: 268 MREGVELDHVSFTSVITTCCH 288
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 133/277 (48%), Gaps = 18/277 (6%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F+ + + + +N I+S F +AL M + V D + + L+
Sbjct: 134 FENLVDPDVVSWNTILSGFDDNQ---IALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGF 190
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
G Q+ + V K G S + VG++ + +YS+ S + A VFDE+ K+ + N+LLSG
Sbjct: 191 LLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL 250
Query: 184 GEAGLWA-QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
+ G + + + + R M ++ D + ++ + C + ++L RQ+H ++ + E
Sbjct: 251 SQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGY--E 308
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
S + + + L+ Y KCG+++ + VF R+VV WT+M+ + +
Sbjct: 309 SLLEVGNILMSRYSKCGVLEAVKSVF-------HQMSERNVVSWTTMI-----SSNKDDA 356
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK 339
+ +F M +G+ P+ + F+ +I+A Q+ G+K
Sbjct: 357 VSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLK 393
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 152/348 (43%), Gaps = 26/348 (7%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKG-FPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F M+ + + +N ++S ++G F F A+ F M V LD + S +T D
Sbjct: 232 FDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETD 291
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ +QIH K G+ S + VG+ L+ YSK ++ VF ++ E+N V ++S
Sbjct: 292 LKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS 351
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
+ + + M + ++ T + A ++ G ++H ++T E
Sbjct: 352 NKD-----DAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSE 406
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
V +S I +Y K ++ A++ F+ + R+++ W +M+ + +NG E
Sbjct: 407 PSV--GNSFITLYAKFEALEDAKKAFE-------DITFREIISWNAMISGFAQNGFSHEA 457
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSN---EFKLNPGPEHYSC 359
+ +F E + P+ F +V++A + VK + + LN P S
Sbjct: 458 LKMFLSAAAETM-PNEYTFGSVLNAIAFAEDI--SVKQGQRCHAHLLKLGLNSCPVVSSA 514
Query: 360 LVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
L+D+ + G + ++ ++ N+ M +W ++++A G+ E
Sbjct: 515 LLDMYAKRGNIDESEKVFNE-----MSQKNQFVWTSIISAYSSHGDFE 557
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 233/465 (50%), Gaps = 13/465 (2%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNF 63
+I+ L C K+L + +H L+ L ++ L+ Y C +
Sbjct: 220 TIVSMLPVCGHLKDLEMGRNVH-KLVEEKRLGDKIEVKNALVNMYLKC---GRMDEARFV 275
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F M + + + +I+ + G AL M V + + S ++ V
Sbjct: 276 FDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKV 335
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
N GK +H + S + + ++L+ +Y+K V VF + +T +A+++G
Sbjct: 336 NDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGC 395
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+ L + L L ++M ++ + TL++ L A L+ + +H Y+ +T S
Sbjct: 396 VQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKT--GFMS 453
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
+ + L+ +Y KCG ++ A ++F +G++ ++ +S+DVVLW +++ YG +G +
Sbjct: 454 SLDAATGLVHVYSKCGTLESAHKIF--NGIQEKH-KSKDVVLWGALISGYGMHGDGHNAL 510
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
+F EM+ G+ P+ I F + ++AC H+G V G+ F M +K HY+C+VDL
Sbjct: 511 QVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDL 570
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHN 423
L RAG L +A+ L+ ++ T ++WGALL ACV N++LG++A + EL+P N
Sbjct: 571 LGRAGRLDEAYNLITTIPFEP----TSTVWGALLAACVTHENVQLGEMAANKLFELEPEN 626
Query: 424 AGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQVTS 468
G +LL+N+YA G W ++ +R +++ GLRK G S +++ S
Sbjct: 627 TGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIRS 671
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 158/332 (47%), Gaps = 16/332 (4%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCM 67
L+ T+++S K LH +++ TG H L T L YA C H+ F+ M
Sbjct: 21 LLNHFAATQSISKTKALHCHVI-TGGRVSGHILST-LSVTYALC---GHITYARKLFEEM 75
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPL--DTYALCSTLTASSRVNDVNF 125
++ L +N++I + R+G A++ F M + V D Y A+ + +
Sbjct: 76 PQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKL 135
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
G +H + + + +V +AL+ +Y V+ A VFD + ++ + N ++SGY
Sbjct: 136 GLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYR 195
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
G L + M + D T+ + L C L +E+GR +H V + +
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV--EEKRLGDKI 253
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
++++L+ MY KCG + +A+ VF R ER RDV+ WT M+ Y +G + ++L
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVF------DRMER-RDVITWTCMINGYTEDGDVENALEL 306
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
+ M EG+RP+ + +++S CG +V+ G
Sbjct: 307 CRLMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 171/380 (45%), Gaps = 25/380 (6%)
Query: 24 LHGNLLRTGTLFFLHD--LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
+HG +LR+ +F D + L+A Y + ++ + F M + + + +N +IS
Sbjct: 139 VHGRILRS---WFGRDKYVQNALLAMY---MNFGKVEMARDVFDVMKNRDVISWNTMISG 192
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
+ R G+ AL F +M +V LD + S L + D+ G+ +H V +
Sbjct: 193 YYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDK 252
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV 201
+ V +ALV++Y K + +A VFD + ++ + +++GY E G LEL R M
Sbjct: 253 IEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQF 312
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
++ + T+++ + C V G+ LH + +R + SD+ +++SLI MY KC
Sbjct: 313 EGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVR--QQVYSDIIIETSLISMYAKC--- 367
Query: 262 KKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAF 321
K+ F++ S+ W++++ +N + + LFK M E + P+
Sbjct: 368 KRVDLCFRVFSGASKYHTGP----WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATL 423
Query: 322 LTVISACGHTGQVHAGVK---YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLN 378
+++ A + + Y L+ + LV + + G L+ A ++ N
Sbjct: 424 NSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAA----TGLVHVYSKCGTLESAHKIFN 479
Query: 379 QTLYKGMGNCTISMWGALLN 398
K + +WGAL++
Sbjct: 480 GIQEKHKSK-DVVLWGALIS 498
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 128/487 (26%), Positives = 237/487 (48%), Gaps = 63/487 (12%)
Query: 19 SAIKKLHGNLLRTGTLFFLHDLHTN--LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFN 76
S +++HG ++R G F D+ +I Y C +++++ F M+ + + +N
Sbjct: 149 SLARQVHGFVIRGG---FDSDVFVGNGMITYYTKC---DNIESARKVFDEMSERDVVSWN 202
Query: 77 VIISNFCRKGF------PFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
+IS + + G + A+ A S N V + S A + +D+ FG ++H
Sbjct: 203 SMISGYSQSGSFEDCKKMYKAMLACSDFKPNGV-----TVISVFQACGQSSDLIFGLEVH 257
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWA 190
+ + + + +A++ Y+K S+ A +FDE+ EK++V A++SGY GL
Sbjct: 258 KKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVK 317
Query: 191 QGLELVRKMPVLRL-------------------------------KYDQFTLSAALRACT 219
+ + L +M + L + + TLS+ L + T
Sbjct: 318 EAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLT 377
Query: 220 GLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNER 279
S ++ G+++H++ +R D +++++ +S+I+ Y K G + AQ+VF N +
Sbjct: 378 YSSNLKGGKEIHAFAIRNGAD--NNIYVTTSIIDNYAKLGFLLGAQRVFD-------NCK 428
Query: 280 SRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK 339
R ++ WT+++ Y +G LF +M G +PD + V+SA H+G
Sbjct: 429 DRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQH 488
Query: 340 YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
F+SM ++ + PG EHY+C+V +L RAG+L A E +++ + +WGALLN
Sbjct: 489 IFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDPIAK----VWGALLNG 544
Query: 400 CVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDV 459
G++E+ + A R E++P N G +++NLY + G W+E +R +K GL+K
Sbjct: 545 ASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLKKIP 604
Query: 460 GCSWVQV 466
G SW++
Sbjct: 605 GTSWIET 611
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 110/228 (48%), Gaps = 21/228 (9%)
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
Q+HA + F+ S L+ Y++ + A VFDEI +N NALL Y
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSRE 102
Query: 188 LWAQGLELVRK------MPVLRLKYDQFTLSAALRACTGLSAVELG---RQLHSYVLRTT 238
++ L + D ++S L+A +G LG RQ+H +V+R
Sbjct: 103 MYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGG 162
Query: 239 HDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS-RDVVLWTSMLGVYGRNG 297
D SDVF+ + +I Y KC ++ A++VF +E S RDVV W SM+ Y ++G
Sbjct: 163 FD--SDVFVGNGMITYYTKCDNIESARKVF--------DEMSERDVVSWNSMISGYSQSG 212
Query: 298 KYKEVIDLFKEMLE-EGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
+++ ++K ML +P+G+ ++V ACG + + G++ + M
Sbjct: 213 SFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKM 260
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/403 (29%), Positives = 199/403 (49%), Gaps = 13/403 (3%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F M+ N + +IS L FS M V ++ S L A S +
Sbjct: 213 FDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRI 272
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
G+QIHA + K G S + + SAL+D+YSK S++DA +F+ E + V +L G
Sbjct: 273 VEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGL 332
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+ G + ++ +M ++ D +SA L +++ LG+QLHS V++
Sbjct: 333 AQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIK--RKFSG 390
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
+ F+ + LI MY KCG + +Q VF R R+ V W SM+ + R+G +
Sbjct: 391 NTFVNNGLINMYSKCGDLTDSQTVF-------RRMPKRNYVSWNSMIAAFARHGHGLAAL 443
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
L++EM ++P + FL+++ AC H G + G + M + P EHY+C++D+
Sbjct: 444 KLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDM 503
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHN 423
L RAG L++A ++ K +C I W ALL AC G+ E+G+ A ++ + P +
Sbjct: 504 LGRAGLLKEAKSFIDSLPLK--PDCKI--WQALLGACSFHGDTEVGEYAAEQLFQTAPDS 559
Query: 424 AGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+ IL++N+Y+ G W E +K G+ K+ G S +++
Sbjct: 560 SSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEI 602
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 124/258 (48%), Gaps = 10/258 (3%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMH 99
+ + L+ Y+ C ++ F+ + + VI+ + G A+ F M
Sbjct: 293 IESALMDMYSKC---GSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRML 349
Query: 100 TNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVK 159
V +D + + L S N + GKQ+H+ V K +S + FV + L+++YSK +
Sbjct: 350 QAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLT 409
Query: 160 DAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACT 219
D+ VF +P++N V N++++ + G L+L +M L +K T + L AC+
Sbjct: 410 DSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACS 469
Query: 220 GLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNER 279
+ ++ GR+L + ++ H IE + +I+M G+ GL+K+A+ +D + +
Sbjct: 470 HVGLIDKGRELLNE-MKEVHGIEPRTEHYTCIIDMLGRAGLLKEAKSF--IDSLPLKP-- 524
Query: 280 SRDVVLWTSMLGVYGRNG 297
D +W ++LG +G
Sbjct: 525 --DCKIWQALLGACSFHG 540
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 174/404 (43%), Gaps = 66/404 (16%)
Query: 24 LHGNLLRTGTLF--FLHDLHTN-------LIAAYATCLPKNHLQTLHNFFKCMNSTNPLH 74
LH ++++ F D+H N L++ YA C L F M + +
Sbjct: 67 LHASIIKNPEFFEPVDADIHRNALVVWNSLLSLYAKC---GKLVDAIKLFDEMPMRDVIS 123
Query: 75 FNVIISNFCR-----KGFPFLA--LTAFSFMHTNNVPLDTYALCSTLTASSRVNDVN--- 124
N++ F R GF L L + F H +TLT V D
Sbjct: 124 QNIVFYGFLRNRETESGFVLLKRMLGSGGFDH------------ATLTIVLSVCDTPEFC 171
Query: 125 -FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
K IHA G+ + VG+ L+ Y K VFD + +N + A++SG
Sbjct: 172 LVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGL 231
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
E L GL L M + + T +AL AC+G + G+Q+H+ + + + IES
Sbjct: 232 IENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWK--YGIES 289
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
++ ++S+L++MY KCG ++ A +F ES E D V T +L +NG +E I
Sbjct: 290 ELCIESALMDMYSKCGSIEDAWTIF-----ESTTE--VDEVSMTVILVGLAQNGSEEEAI 342
Query: 304 DLFKEMLEEGIRPD--------GIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPE 355
F ML+ G+ D G++F+ ++ G Q+H+ V + N F +N G
Sbjct: 343 QFFIRMLQAGVEIDANVVSAVLGVSFID--NSLGLGKQLHSLVIKRKFSGNTF-VNNG-- 397
Query: 356 HYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
L+++ + G+L + QT+++ M W +++ A
Sbjct: 398 ----LINMYSKCGDLTDS-----QTVFRRMPKRNYVSWNSMIAA 432
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 125/389 (32%), Positives = 198/389 (50%), Gaps = 50/389 (12%)
Query: 111 CSTLTASSRVNDVNFGKQIHAHVGKLGWSSS-VFVGSALVDLYSKLSSVKDAALVFDEIP 169
C T+ S G +H + KLG + V VG+A++ +YSK K A LVFD +
Sbjct: 81 CGDFTSGSEA----LGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYME 136
Query: 170 EKNTVCANALLSGYGEAGLWAQGLELVRKMP----------------------------- 200
+KN+V N ++ GY +G ++ KMP
Sbjct: 137 DKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFRE 196
Query: 201 --VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC 258
+ +K D + AAL ACT L A+ G +H YVL + D +++V + +SLI++Y +C
Sbjct: 197 MQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVL--SQDFKNNVRVSNSLIDLYCRC 254
Query: 259 GLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDG 318
G V+ A+QVF N R VV W S++ + NG E + F++M E+G +PD
Sbjct: 255 GCVEFARQVF-------YNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDA 307
Query: 319 IAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLN 378
+ F ++AC H G V G++YF+ M +++++P EHY CLVDL RAG L+ A +L+
Sbjct: 308 VTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLV- 366
Query: 379 QTLYKGMGNCTISMWGALLNACVDCG-NIELGKLAGQRALELDPHNAGICILLSNLYARF 437
Q++ I G+LL AC + G NI L + + +L+ + ++LSN+YA
Sbjct: 367 QSMPMKPNEVVI---GSLLAACSNHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAAD 423
Query: 438 GMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
G W+ +R +K GL+K G S +++
Sbjct: 424 GKWEGASKMRRKMKGLGLKKQPGFSSIEI 452
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 110/223 (49%), Gaps = 6/223 (2%)
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F M + + + +I+ F +KG+ AL F M + V D A+ + L A + +
Sbjct: 162 MFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGA 221
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
++FG +H +V + ++V V ++L+DLY + V+ A VF + ++ V N+++ G
Sbjct: 222 LSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVG 281
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
+ G + L RKM K D T + AL AC+ + VE G + + +++ + I
Sbjct: 282 FAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLR-YFQIMKCDYRIS 340
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVL 285
+ L+++Y + G ++ A ++ V+S + +VV+
Sbjct: 341 PRIEHYGCLVDLYSRAGRLEDALKL-----VQSMPMKPNEVVI 378
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 111/250 (44%), Gaps = 43/250 (17%)
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSA--VELGRQLHSYVLRTTHDIESD 244
G A+ + M + ++ + T A L C ++ LG LH Y + D +
Sbjct: 50 GRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLD-RNH 108
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNE-----------RS------------- 280
V + +++I MY K G KKA+ VF D +E +N RS
Sbjct: 109 VMVGTAIIGMYSKRGRFKKARLVF--DYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKM 166
Query: 281 --RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGV 338
RD++ WT+M+ + + G +E + F+EM G++PD +A + ++AC + G + G+
Sbjct: 167 PERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGL 226
Query: 339 ---KYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGA 395
+Y +S +FK N + L+DL CR G + E Q Y M T+ W +
Sbjct: 227 WVHRYV--LSQDFKNNVRVSN--SLIDLYCRCGCV----EFARQVFYN-MEKRTVVSWNS 277
Query: 396 LLNACVDCGN 405
++ GN
Sbjct: 278 VIVGFAANGN 287
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/500 (26%), Positives = 237/500 (47%), Gaps = 52/500 (10%)
Query: 2 SNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLH 61
S +II L C +L++ K++H +LR L + LI+ YA +
Sbjct: 330 SVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARF---GDTSAAY 386
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
F M++ + + +N I+ F F L + + LD+ + S L V
Sbjct: 387 WAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQ 446
Query: 122 DVNFGKQIHAHVGKLGW---SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNT-VCAN 177
+ K++H + K G +G+AL+D Y+K +V+ A +F + E+ T V N
Sbjct: 447 GIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSERRTLVSYN 506
Query: 178 ALLSGYGEAG------------------LWA-------------QGLELVRKMPVLRLKY 206
+LLSGY +G W+ + + + R++ ++
Sbjct: 507 SLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMRP 566
Query: 207 DQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQ 266
+ T+ L C L+++ L RQ H Y++R D+ L+ +L+++Y KCG +K A
Sbjct: 567 NTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG---LGDIRLKGTLLDVYAKCGSLKHAYS 623
Query: 267 VFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVIS 326
VF+ D RD+V++T+M+ Y +G+ KE + ++ M E I+PD + T+++
Sbjct: 624 VFQSDA-------RRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLT 676
Query: 327 ACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMG 386
AC H G + G++ ++S+ + P E Y+C VDL+ R G L A+ + Q +
Sbjct: 677 ACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNA 736
Query: 387 NCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHL 446
N +WG LL AC ++LG L+ + + G +L+SN+YA W+ + L
Sbjct: 737 N----IWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMEL 792
Query: 447 RVVIKERGLRKDVGCSWVQV 466
R ++K++ ++K GCSW++V
Sbjct: 793 RNLMKKKEMKKPAGCSWLEV 812
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 182/408 (44%), Gaps = 34/408 (8%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND- 122
F + + + +N II+ F A +F M + + + L + ++
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKN 240
Query: 123 --VNFGKQIHAHVGKLGW-SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANAL 179
G+QIH++V + W + VFV ++LV Y ++ +++AA +F + K+ V N +
Sbjct: 241 IACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVV 300
Query: 180 LSGYGEAGLWAQGLELVRKMPVL-RLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTT 238
++GY W + +L + + D T+ + L C L+ + G+++HSY+LR +
Sbjct: 301 IAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHS 360
Query: 239 HDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGK 298
+ +E D + ++LI Y + G A F L ++D++ W ++L + + K
Sbjct: 361 YLLE-DTSVGNALISFYARFGDTSAAYWAFSL-------MSTKDIISWNAILDAFADSPK 412
Query: 299 YKEVIDLFKEMLEEGIRPDGIAFLTVISAC------GHTGQVHAGVKYFESMSNEFKLNP 352
+ ++L +L E I D + L+++ C G +VH + +
Sbjct: 413 QFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHG----YSVKAGLLHDEE 468
Query: 353 GPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGN-CTISMWGALLNACVDCGNIELGKL 411
P+ + L+D + G ++ A ++ G+ T+ + +LL+ V+ G+ + ++
Sbjct: 469 EPKLGNALLDAYAKCGNVEYA-----HKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQM 523
Query: 412 AGQRALELDPHNAGICILLSNLYARFGMWDE-IGHLRVVIKERGLRKD 458
E+ + L+ +YA +E IG R I+ RG+R +
Sbjct: 524 LFT---EMSTTDLTTWSLMVRIYAESCCPNEAIGVFR-EIQARGMRPN 567
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 124/300 (41%), Gaps = 26/300 (8%)
Query: 106 DTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVF 165
D + A + V+D+ G+ +H V KLG + V +++++Y+K + D +F
Sbjct: 20 DHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF 79
Query: 166 DEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRL----KYDQFTLSAALRACTGL 221
++ + V N +L+G + G E +R + K T + L C L
Sbjct: 80 RQMDSLDPVVWNIVLTGLSVSC----GRETMRFFKAMHFADEPKPSSVTFAIVLPLCVRL 135
Query: 222 SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV-KKAQQVFKLDGVESRNERS 280
G+ +HSY+++ +E D + ++L+ MY K G + A F DG+
Sbjct: 136 GDSYNGKSMHSYIIKA--GLEKDTLVGNALVSMYAKFGFIFPDAYTAF--DGIA-----D 186
Query: 281 RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQ---VHAG 337
+DVV W +++ + N + F ML+E P+ V+ C + +G
Sbjct: 187 KDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSG 246
Query: 338 VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
+ + L + LV R G +++A +L+ MG+ + W ++
Sbjct: 247 RQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEA-----ASLFTRMGSKDLVSWNVVI 301
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 145/472 (30%), Positives = 231/472 (48%), Gaps = 26/472 (5%)
Query: 2 SNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKN-HLQTL 60
S ++I L C K +++HG L+ G DL+ ++ A T + +L
Sbjct: 415 SFTLISSLSSCASLKWAKLGQQIHGESLKLGI-----DLNVSVSNALMTLYAETGYLNEC 469
Query: 61 HNFFKCMNSTNPLHFNVIISNFCR--KGFPFLALTAFSFMHTNNVPLDTYALCSTLTASS 118
F M + + +N II R + P A+ F L+ S L+A S
Sbjct: 470 RKIFSSMPEHDQVSWNSIIGALARSERSLP-EAVVCFLNAQRAGQKLNRITFSSVLSAVS 528
Query: 119 RVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK-NTVCAN 177
++ GKQIH K + +AL+ Y K + +F + E+ + V N
Sbjct: 529 SLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWN 588
Query: 178 ALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRT 237
+++SGY L A+ L+LV M + D F + L A ++ +E G ++H+ +R
Sbjct: 589 SMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRA 648
Query: 238 THDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNG 297
+ESDV + S+L++MY KCG + A + F V RN S W SM+ Y R+G
Sbjct: 649 C--LESDVVVGSALVDMYSKCGRLDYALRFFNTMPV--RNSYS-----WNSMISGYARHG 699
Query: 298 KYKEVIDLFKEMLEEG-IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEH 356
+ +E + LF+ M +G PD + F+ V+SAC H G + G K+FESMS+ + L P EH
Sbjct: 700 QGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEH 759
Query: 357 YSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG--NIELGKLAGQ 414
+SC+ D+L RAGEL K + + + K + +W +L AC ELGK A +
Sbjct: 760 FSCMADVLGRAGELDKLEDFIEKMPMKP----NVLIWRTVLGACCRANGRKAELGKKAAE 815
Query: 415 RALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+L+P NA +LL N+YA G W+++ R +K+ ++K+ G SWV +
Sbjct: 816 MLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTM 867
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 129/279 (46%), Gaps = 28/279 (10%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN-- 121
F + N + +N IIS + + G A FS M + Y S +T + +
Sbjct: 163 FGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEP 222
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
DV +QI + K G + +FVGS LV ++K S+ A VF+++ +N V N L+
Sbjct: 223 DVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMV 282
Query: 182 G-----YGEAG--LWAQGLELVRKMP----VLRLKYDQFTLSAALRACTGLSAVELGRQL 230
G +GE L+ ++ P +L + +++L+ + ++ GR++
Sbjct: 283 GLVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEV-------GLKKGREV 335
Query: 231 HSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSML 290
H +V+ TT ++ V + + L+ MY KCG + A++VF +D V W SM+
Sbjct: 336 HGHVI-TTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYF-------MTDKDSVSWNSMI 387
Query: 291 GVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG 329
+NG + E ++ +K M I P ++ +S+C
Sbjct: 388 TGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCA 426
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 137/286 (47%), Gaps = 18/286 (6%)
Query: 42 TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN 101
+ L++A+A L F M + N + N ++ R+ + A F M++
Sbjct: 247 SGLVSAFA---KSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 102 -NVPLDTYA-LCSTLTASSRVNDVNF--GKQIHAHVGKLGWSS-SVFVGSALVDLYSKLS 156
+V ++Y L S+ S +V G+++H HV G V +G+ LV++Y+K
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363
Query: 157 SVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALR 216
S+ DA VF + +K++V N++++G + G + + +E + M + FTL ++L
Sbjct: 364 SIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLS 423
Query: 217 ACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESR 276
+C L +LG+Q+H L+ D+ +V + ++L+ +Y + G + + +++F
Sbjct: 424 SCASLKWAKLGQQIHGESLKLGIDL--NVSVSNALMTLYAETGYLNECRKIFS------- 474
Query: 277 NERSRDVVLWTSMLGVYGRNGK-YKEVIDLFKEMLEEGIRPDGIAF 321
+ D V W S++G R+ + E + F G + + I F
Sbjct: 475 SMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 107/236 (45%), Gaps = 21/236 (8%)
Query: 100 TNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVK 159
TN VPL C ++R H+ + K V++ + L++ Y +
Sbjct: 2 TNCVPLSFVQSCVGHRGAARF--------FHSRLYKNRLDKDVYLCNNLINAYLETGDSV 53
Query: 160 DAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACT 219
A VFDE+P +N V ++SGY G + L +R M + +Q+ + LRAC
Sbjct: 54 SARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQ 113
Query: 220 GLSAVEL--GRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC-GLVKKAQQVFKLDGVESR 276
+ +V + GRQ+H + + ++ + D + + LI MY KC G V A F +E +
Sbjct: 114 EIGSVGILFGRQIHGLMFKLSYAV--DAVVSNVLISMYWKCIGSVGYALCAF--GDIEVK 169
Query: 277 NERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLT-VISACGHT 331
N V W S++ VY + G + +F M +G RP F + V +AC T
Sbjct: 170 NS-----VSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLT 220
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 123/275 (44%), Gaps = 17/275 (6%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMH 99
L NLI AY L + F M N + + I+S + R G AL M
Sbjct: 38 LCNNLINAY---LETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMV 94
Query: 100 TNNVPLDTYALCSTLTASSRVNDVN--FGKQIHAHVGKLGWSSSVFVGSALVDLYSK-LS 156
+ + YA S L A + V FG+QIH + KL ++ V + L+ +Y K +
Sbjct: 95 KEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIG 154
Query: 157 SVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALR 216
SV A F +I KN+V N+++S Y +AG + M + ++T + +
Sbjct: 155 SVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVT 214
Query: 217 ACTGLSA--VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVE 274
L+ V L Q+ + ++ + +D+F+ S L+ + K G + A++VF + +E
Sbjct: 215 TACSLTEPDVRLLEQIMCTIQKS--GLLTDLFVGSGLVSAFAKSGSLSYARKVF--NQME 270
Query: 275 SRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
+RN V L M+G+ R +E LF +M
Sbjct: 271 TRNA----VTLNGLMVGLV-RQKWGEEATKLFMDM 300
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Query: 215 LRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVE 274
+++C G R HS + + + ++ DV+L ++LI Y + G A++VF D +
Sbjct: 10 VQSCVGHRGA--ARFFHSRLYK--NRLDKDVYLCNNLINAYLETGDSVSARKVF--DEMP 63
Query: 275 SRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQV 334
RN V W ++ Y RNG++KE + ++M++EGI + AF++V+ AC G V
Sbjct: 64 LRN-----CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 192 bits (487), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 127/444 (28%), Positives = 224/444 (50%), Gaps = 30/444 (6%)
Query: 24 LHGNLLRTGTLFFLHDL--HTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
+HG +LR G F D+ T+ + Y C L + F M N + + ++
Sbjct: 132 VHGLVLRIG---FDKDVVVGTSFVDFYGKC---KDLFSARKVFGEMPERNAVSWTALVVA 185
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTY-ALCSTLTASSRVNDVNFGKQIHAHVGKLGWSS 140
+ + G A + F M N L ++ AL L S D+ K++ + K
Sbjct: 186 YVKSGELEEAKSMFDLMPERN--LGSWNALVDGLVKS---GDLVNAKKLFDEMPK----R 236
Query: 141 SVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMP 200
+ ++++D Y+K + A +F+E + +AL+ GY + G + ++ +M
Sbjct: 237 DIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMC 296
Query: 201 VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGL 260
+K D+F + + AC+ + EL ++ SY+ + + S ++ +LI+M KCG
Sbjct: 297 AKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH-YVVPALIDMNAKCGH 355
Query: 261 VKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIA 320
+ +A ++F+ RD+V + SM+ +G E I LF++M++EGI PD +A
Sbjct: 356 MDRAAKLFE-------EMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVA 408
Query: 321 FLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQT 380
F ++ CG + V G++YFE M ++ + P+HYSC+V+LL R G+L++A+EL+
Sbjct: 409 FTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSM 468
Query: 381 LYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMW 440
++ S WG+LL C GN E+ ++ + EL+P +AG +LLSN+YA W
Sbjct: 469 PFEAHA----SAWGSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRW 524
Query: 441 DEIGHLRVVIKERGLRKDVGCSWV 464
++ HLR + E G+ K G SW+
Sbjct: 525 TDVAHLRDKMNENGITKICGRSWI 548
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 145/340 (42%), Gaps = 22/340 (6%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAF-SFMHTNNVPLDTYALCSTLTASSRVND 122
F+ + S +N +I + K F ++ M T D Y + S
Sbjct: 66 FERVPSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQ 125
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
V G +H V ++G+ V VG++ VD Y K + A VF E+PE+N V AL+
Sbjct: 126 VRVGSSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVA 185
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
Y ++G + + MP L + +++ ++A +L ++ +
Sbjct: 186 YVKSGELEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMP----------K 235
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
D+ +S+I+ Y K G + A+ +F+ R DV W++++ Y +NG+ E
Sbjct: 236 RDIISYTSMIDGYAKGGDMVSARDLFE-------EARGVDVRAWSALILGYAQNGQPNEA 288
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY--SCL 360
+F EM + ++PD + ++SAC G K + ++N HY L
Sbjct: 289 FKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQ--RMNKFSSHYVVPAL 346
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNAC 400
+D+ + G + +A +L + + + + M G ++ C
Sbjct: 347 IDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGC 386
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 191 bits (486), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 117/392 (29%), Positives = 205/392 (52%), Gaps = 14/392 (3%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N +I+ + F L+ F MH D Y L S + S+ + V+ G+QIH +
Sbjct: 59 WNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTI 118
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
K G + V S+L +Y + ++D +V +P +N V N L+ G + G L
Sbjct: 119 KYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLY 178
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
L + M + + ++ T L +C+ L+ G+Q+H+ ++ S V + SSLI M
Sbjct: 179 LYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIG--ASSVVAVVSSLISM 236
Query: 255 YGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEE-G 313
Y KCG + A + F E +E D V+W+SM+ YG +G+ E I+LF M E+
Sbjct: 237 YSKCGCLGDAAKAFS----EREDE---DEVMWSSMISAYGFHGQGDEAIELFNTMAEQTN 289
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
+ + +AFL ++ AC H+G G++ F+ M ++ PG +HY+C+VDLL RAG L +A
Sbjct: 290 MEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQA 349
Query: 374 WELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNL 433
++ K I +W LL+AC N E+ + + L++DP+++ +LL+N+
Sbjct: 350 EAIIRSMPIK----TDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANV 405
Query: 434 YARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
+A W ++ +R ++++ ++K+ G SW +
Sbjct: 406 HASAKRWRDVSEVRKSMRDKNVKKEAGISWFE 437
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 119/229 (51%), Gaps = 19/229 (8%)
Query: 114 LTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNT 173
++ S++ D ++ + K + SS + L++ Y + + +A VFDE+P++
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSS----NILINGYVRAGDLVNARKVFDEMPDRKL 56
Query: 174 VCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSY 233
NA+++G + +GL L R+M L D++TL + GL +V +G+Q+H Y
Sbjct: 57 TTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGY 116
Query: 234 VLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVY 293
++ + +E D+ + SSL MY + G ++ + V R+ R++V W +++
Sbjct: 117 TIK--YGLELDLVVNSSLAHMYMRNGKLQDGEIVI-------RSMPVRNLVAWNTLIMGN 167
Query: 294 GRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC------GHTGQVHA 336
+NG + V+ L+K M G RP+ I F+TV+S+C G Q+HA
Sbjct: 168 AQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHA 216
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 151/331 (45%), Gaps = 20/331 (6%)
Query: 16 KNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHF 75
+++S +++HG ++ G DL N A+ + LQ + M N + +
Sbjct: 105 RSVSIGQQIHGYTIKYGLEL---DLVVNSSLAHMY-MRNGKLQDGEIVIRSMPVRNLVAW 160
Query: 76 NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
N +I + G P L + M + + + L++ S + G+QIHA K
Sbjct: 161 NTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIK 220
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLEL 195
+G SS V V S+L+ +YSK + DAA F E +++ V ++++S YG G + +EL
Sbjct: 221 IGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIEL 280
Query: 196 VRKMP-VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
M ++ ++ L AC+ + G +L ++ + + + + ++++
Sbjct: 281 FNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE-KYGFKPGLKHYTCVVDL 339
Query: 255 YGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGI 314
G+ G + +A+ + + +++ D+V+W ++L + + +FKE+L+ I
Sbjct: 340 LGRAGCLDQAEAIIRSMPIKT------DIVIWKTLLSACNIHKNAEMAQRVFKEILQ--I 391
Query: 315 RPDGIAFLTVISACGHTGQVHAGVKYFESMS 345
P+ A +++ VHA K + +S
Sbjct: 392 DPNDSACYVLLA------NVHASAKRWRDVS 416
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 191 bits (486), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 214/403 (53%), Gaps = 18/403 (4%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFM-HTNNVPLDTYALCSTLTASSRVND 122
F M N + +NV+I + R G A F M N + D + L AS+ +
Sbjct: 290 FNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE- 348
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
G+ IH + + G+ + + +AL+D+Y + +K A ++FD + EKN + N++++
Sbjct: 349 ---GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAA 405
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
Y + G LEL +++ L D T+++ L A ++ GR++H+Y++++ +
Sbjct: 406 YVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRY--W 463
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
S+ + +SL+ MY CG ++ A++ F + +DVV W S++ Y +G +
Sbjct: 464 SNTIILNSLVHMYAMCGDLEDARKCFN-------HILLKDVVSWNSIIMAYAVHGFGRIS 516
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVD 362
+ LF EM+ + P+ F ++++AC +G V G +YFESM E+ ++PG EHY C++D
Sbjct: 517 VWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLD 576
Query: 363 LLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPH 422
L+ R G A L + + T +WG+LLNA + +I + + A ++ +++
Sbjct: 577 LIGRTGNFSAAKRFLEEMPFVP----TARIWGSLLNASRNHKDITIAEFAAEQIFKMEHD 632
Query: 423 NAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
N G +LL N+YA G W+++ ++++++ +G+ + S V+
Sbjct: 633 NTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVE 675
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/349 (29%), Positives = 181/349 (51%), Gaps = 29/349 (8%)
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
F MN + +NV+I F G A+ +S M V DT+ + + + ++
Sbjct: 85 QLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGIS 144
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
+ GK+IHA V KLG+ S V+V ++L+ LY KL DA VF+E+PE++ V N+++S
Sbjct: 145 SLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMIS 204
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
GY G L L ++M K D+F+ +AL AC+ + + ++G+++H + +R+ I
Sbjct: 205 GYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR--I 262
Query: 242 ES-DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
E+ DV + +S+++MY K G V A+++F +G+ RN +V W M+G Y RNG+
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIF--NGMIQRN-----IVAWNVMIGCYARNGRVT 315
Query: 301 EVIDLFKEMLEE-GIRPDGIAFLTVISAC----GHTGQVHAGVKYFESMSNEFKLNPGPE 355
+ F++M E+ G++PD I + ++ A G T +A + F P
Sbjct: 316 DAFLCFQKMSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFL---------PHMV 366
Query: 356 HYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG 404
+ L+D+ G+L+ A + ++ M + W +++ A V G
Sbjct: 367 LETALIDMYGECGQLKSA-----EVIFDRMAEKNVISWNSIIAAYVQNG 410
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 129/269 (47%), Gaps = 21/269 (7%)
Query: 158 VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRA 217
++DA +FDE+ + + N ++ G+ GL+ + ++ +M +K D FT +++
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKS 139
Query: 218 CTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRN 277
G+S++E G+++H+ V++ SDV++ +SLI +Y K G A++VF+
Sbjct: 140 VAGISSLEEGKKIHAMVIKL--GFVSDVYVCNSLISLYMKLGCAWDAEKVFE-------E 190
Query: 278 ERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
RD+V W SM+ Y G + LFKEML+ G +PD + ++ + AC H G
Sbjct: 191 MPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMG 250
Query: 338 VKYFESMSNEFKLNPGPEH-YSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGAL 396
K + ++ G + ++D+ + GE+ A + ++ GM I W +
Sbjct: 251 -KEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYA-----ERIFNGMIQRNIVAWNVM 304
Query: 397 LNACVDCGNIE-----LGKLAGQRALELD 420
+ G + K++ Q L+ D
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPD 333
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 119/248 (47%), Gaps = 5/248 (2%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
+ +HG +R G L + L T LI Y C L++ F M N + +N II+
Sbjct: 350 RTIHGYAMRRGFLPHMV-LETALIDMYGEC---GQLKSAEVIFDRMAEKNVISWNSIIAA 405
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
+ + G + AL F + +++ D+ + S L A + ++ G++IHA++ K + S+
Sbjct: 406 YVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSN 465
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV 201
+ ++LV +Y+ ++DA F+ I K+ V N+++ Y G + L +M
Sbjct: 466 TIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIA 525
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
R+ ++ T ++ L AC+ V+ G + + R + I+ + ++++ G+ G
Sbjct: 526 SRVNPNKSTFASLLAACSISGMVDEGWEYFESMKR-EYGIDPGIEHYGCMLDLIGRTGNF 584
Query: 262 KKAQQVFK 269
A++ +
Sbjct: 585 SAAKRFLE 592
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 127/425 (29%), Positives = 213/425 (50%), Gaps = 38/425 (8%)
Query: 65 KCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDT-----YALCSTLTASSR 119
KC ST L+ + C G A F M NV L T Y L L ++ R
Sbjct: 23 KC--STESLNQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARR 80
Query: 120 VNDVNFGKQI---------HAHVGKLGWSSSVFVGSALVDL---------YSKLSSVKDA 161
D++ + I + +G + + S+F D+ Y+ + ++
Sbjct: 81 YFDLSPERDIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEAC 140
Query: 162 ALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM-PVLRLKYDQFTLSAALRACTG 220
VFD++PE+N N L+ GY + G ++ L ++M + + T++ L AC
Sbjct: 141 ERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAK 200
Query: 221 LSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS 280
L A + G+ +H Y ++ + DV ++++LI+MYGKCG ++ A +VFK G+ +
Sbjct: 201 LGAFDFGKWVHKYGETLGYN-KVDVNVKNALIDMYGKCGAIEIAMEVFK--GI-----KR 252
Query: 281 RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKY 340
RD++ W +M+ +G E ++LF EM GI PD + F+ V+ AC H G V G+ Y
Sbjct: 253 RDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAY 312
Query: 341 FESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNAC 400
F SM +F + P EH C+VDLL RAG L +A E +N+ K +W LL A
Sbjct: 313 FNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKA----DAVIWATLLGAS 368
Query: 401 VDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVG 460
+++G++A + ++L+P N ++LSN+Y G +D+ L+V +++ G +K+ G
Sbjct: 369 KVYKKVDIGEVALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAG 428
Query: 461 CSWVQ 465
SW++
Sbjct: 429 VSWIE 433
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/406 (28%), Positives = 206/406 (50%), Gaps = 15/406 (3%)
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPL--DTYALCSTLTASSR 119
F M + + +N +IS + +G+ S M + V + S ++A
Sbjct: 87 KLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVY 146
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANAL 179
G+ IH V K G V V +A ++ Y K + + +F+++ KN V N +
Sbjct: 147 GGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTM 206
Query: 180 LSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTH 239
+ + + GL +GL + + DQ T A LR+C + V L + +H ++
Sbjct: 207 IVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIM--FG 264
Query: 240 DIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKY 299
+ + ++L+++Y K G ++ + VF S D + WT+ML Y +G
Sbjct: 265 GFSGNKCITTALLDLYSKLGRLEDSSTVF-------HEITSPDSMAWTAMLAAYATHGFG 317
Query: 300 KEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSC 359
++ I F+ M+ GI PD + F +++AC H+G V G YFE+MS ++++P +HYSC
Sbjct: 318 RDAIKHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSC 377
Query: 360 LVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALEL 419
+VDLL R+G LQ A+ L+ + + + +WGALL AC + +LG A +R EL
Sbjct: 378 MVDLLGRSGLLQDAYGLIKEMPMEP----SSGVWGALLGACRVYKDTQLGTKAAERLFEL 433
Query: 420 DPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
+P + ++LSN+Y+ G+W + +R ++K++GL + GCS+++
Sbjct: 434 EPRDGRNYVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIE 479
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 117/245 (47%), Gaps = 16/245 (6%)
Query: 92 LTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDL 151
L+ SF+H+ LD + S + A + + +H V K F+G LV
Sbjct: 21 LSQSSFVHS----LDA-NVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGC 75
Query: 152 YSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKY--DQF 209
Y +L A +FDE+PE++ V N+L+SGY G + E++ +M + + + ++
Sbjct: 76 YLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEV 135
Query: 210 TLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFK 269
T + + AC + E GR +H V++ + +V + ++ I YGK G + + ++F+
Sbjct: 136 TFLSMISACVYGGSKEEGRCIHGLVMK--FGVLEEVKVVNAFINWYGKTGDLTSSCKLFE 193
Query: 270 LDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG 329
+ +++V W +M+ ++ +NG ++ + F G PD FL V+ +C
Sbjct: 194 DLSI-------KNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCE 246
Query: 330 HTGQV 334
G V
Sbjct: 247 DMGVV 251
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/424 (28%), Positives = 204/424 (48%), Gaps = 41/424 (9%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTA-SSRVNDVNFGKQIHAHV 133
+N++IS G L+ F M + D Y S + A S+ ++V +G+ +HA +
Sbjct: 172 WNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVM 231
Query: 134 GKLGWSSSVFVGSALVDLYSKLSSVKDA------------------------------AL 163
K GWSS+V ++++ Y+KL S DA AL
Sbjct: 232 LKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKAL 291
Query: 164 -VFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS 222
VF PEKN V +++GYG G Q L +M + D F A L AC+GL+
Sbjct: 292 EVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLA 351
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRD 282
+ G+ +H ++ + ++ ++L+ +Y KCG +K+A + F + ++D
Sbjct: 352 LLGHGKMIHGCLIHC--GFQGYAYVGNALVNLYAKCGDIKEADRAFG-------DIANKD 402
Query: 283 VVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFE 342
+V W +ML +G +G + + L+ M+ GI+PD + F+ +++ C H+G V G FE
Sbjct: 403 LVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFE 462
Query: 343 SMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVD 402
SM ++++ +H +C++D+ R G L +A +L + S W LL AC
Sbjct: 463 SMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACST 522
Query: 403 CGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCS 462
+ ELG+ + +P +LLSNLY G W E +R + ERG++K GCS
Sbjct: 523 HWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCS 582
Query: 463 WVQV 466
W++V
Sbjct: 583 WIEV 586
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 185/430 (43%), Gaps = 98/430 (22%)
Query: 44 LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNV 103
L + A+ + + F M + + +N +++++ R G A+ F+ + ++
Sbjct: 7 LTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDA 66
Query: 104 PLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSK----LSSVK 159
D Y+ + L+ + + +V FG++I + V + G+ +S+ V ++L+D+Y K LS+ K
Sbjct: 67 KPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 160 ----------------------------DAAL-VFDEIPEKNTVCANALLSGYGEAGLWA 190
+AAL VF E+P++ N ++SG+ G
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLE 186
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSA-VELGRQLHSYVLR------------- 236
L L ++M K D +T S+ + AC+ S+ V GR +H+ +L+
Sbjct: 187 SCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSV 246
Query: 237 ------------TTHDIES-DVFLQ---SSLIEMYGKCGLVKKAQQVFKLDGVESRNERS 280
++ES +V Q +S+I+ K G +KA +VF L
Sbjct: 247 LSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHL-------APE 299
Query: 281 RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG----------- 329
+++V WT+M+ YGRNG ++ + F EM++ G+ D A+ V+ AC
Sbjct: 300 KNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMI 359
Query: 330 HTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCT 389
H +H G + + + N LV+L + G++++A + + N
Sbjct: 360 HGCLIHCGFQGYAYVGN------------ALVNLYAKCGDIKEA-----DRAFGDIANKD 402
Query: 390 ISMWGALLNA 399
+ W +L A
Sbjct: 403 LVSWNTMLFA 412
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 114/222 (51%), Gaps = 26/222 (11%)
Query: 146 SALVDLYSKLSS------VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
S LV L SK++S + A VFD +PE +TV N +L+ Y GL + + L ++
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQL 61
Query: 200 PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG 259
K D ++ +A L C L V+ GR++ S V+R+ + + + +SLI+MYGKC
Sbjct: 62 RFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRS--GFCASLPVNNSLIDMYGKCS 119
Query: 260 LVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGI 319
A +VF+ +SRNE V W S+L Y +++ +D+F EM P +
Sbjct: 120 DTLSANKVFRDMCCDSRNE-----VTWCSLLFAYMNAEQFEAALDVFVEM------PKRV 168
Query: 320 AFL--TVISACGHTGQVHAGVKYFESM-SNEFKLNPGPEHYS 358
AF +IS H G++ + + F+ M +EFK P+ Y+
Sbjct: 169 AFAWNIMISGHAHCGKLESCLSLFKEMLESEFK----PDCYT 206
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 33/297 (11%)
Query: 51 CLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYAL 110
C+ + F N + + +I+ + R G AL F M + V D +A
Sbjct: 281 CMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAY 340
Query: 111 CSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE 170
+ L A S + + GK IH + G+ +VG+ALV+LY+K +K+A F +I
Sbjct: 341 GAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIAN 400
Query: 171 KNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQL 230
K+ V N +L +G GL Q L+L M +K D T L C+ VE G +
Sbjct: 401 KDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMI 460
Query: 231 HSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQV---FKLDGVESRNERSRDVVL-- 285
+++ + I +V + +I+M+G+ G + +A+ + + +S N S + +L
Sbjct: 461 FESMVK-DYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGA 519
Query: 286 ----WTSMLG-----------------------VYGRNGKYKEVIDLFKEMLEEGIR 315
W + LG +Y G++KE D+ +EM+E G++
Sbjct: 520 CSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMK 576
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/459 (27%), Positives = 226/459 (49%), Gaps = 54/459 (11%)
Query: 42 TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMH-- 99
T+L++ Y+ C F+ + + + +N IS G L + F+ M
Sbjct: 168 TSLVSMYSRC---GEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKF 224
Query: 100 TNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVK 159
++ P D + +TA + + ++ +G+Q+H V K + VG+AL+D+YSK K
Sbjct: 225 SSEEPNDV-TFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWK 283
Query: 160 DAALVFDEIPE-KNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFT-------- 210
A +VF E+ + +N + N+++SG G +EL K+ LK D T
Sbjct: 284 SAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGF 343
Query: 211 ---------------------------LSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
L++ L AC+ + ++ G+++H +V++ E
Sbjct: 344 SQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAA--ER 401
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
D+F+ +SLI+MY KCGL A+++F + + +D V W M+ YG++G+ + I
Sbjct: 402 DIFVLTSLIDMYMKCGLSSWARRIF-----DRFEPKPKDPVFWNVMISGYGKHGECESAI 456
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
++F+ + EE + P F V+SAC H G V G + F M E+ P EH C++DL
Sbjct: 457 EIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDL 516
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHN 423
L R+G L++A E+++Q M + S++ +LL +C + LG+ A + EL+P N
Sbjct: 517 LGRSGRLREAKEVIDQ-----MSEPSSSVYSSLLGSCRQHLDPVLGEEAAMKLAELEPEN 571
Query: 424 AGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCS 462
++LS++YA W+++ +R VI ++ L K G S
Sbjct: 572 PAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 157/341 (46%), Gaps = 22/341 (6%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDL-HTNLIAAYATCLPKNHLQTLHNFFKC 66
L C ++ + LH +++TG FF+ T L++ Y + +
Sbjct: 37 LLKSCAKLGDVVQGRILHAQVVKTG--FFVDVFTATALVSMY---MKVKQVTDALKVLDE 91
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
M N +S GF A F + +++ + S L D+ G
Sbjct: 92 MPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGG---CGDIEGG 148
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
Q+H K G+ V+VG++LV +YS+ AA +F+++P K+ V NA +SG E
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 187 G---LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
G L L+RK + + T A+ AC L ++ GRQLH V++ E+
Sbjct: 209 GVMNLVPSVFNLMRKFS--SEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFET 266
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
V ++LI+MY KC K A VF + + +R+++ W S++ NG+++ +
Sbjct: 267 MV--GTALIDMYSKCRCWKSAYIVF------TELKDTRNLISWNSVISGMMINGQHETAV 318
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
+LF+++ EG++PD + ++IS G+V K+FE M
Sbjct: 319 ELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 135/475 (28%), Positives = 223/475 (46%), Gaps = 51/475 (10%)
Query: 27 NLLRTGTLFFLHDLHTN-LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRK 85
N+ + F+ + N +IAAY C + + L F++ + + +N +I+ + +
Sbjct: 181 NIFNGSCVEFVDSVARNAMIAAY--CREGDIDKALSVFWRNPELNDTISWNTLIAGYAQN 238
Query: 86 GFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVG 145
G+ AL M N + D ++ + L S + + GK++HA V K G S+ FV
Sbjct: 239 GYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVS 298
Query: 146 SALVDLYSKLSSVK-------------------------------DAALVFDEIPEKNTV 174
S +VD+Y K ++K +A +FD + EKN V
Sbjct: 299 SGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLV 358
Query: 175 CANALLSGYGEAGLWAQGLELVRKMPVLRLKY-DQFTLSAALRACTGLSAVELGRQLHSY 233
A+ GY LEL R D + + L AC+ + +E G+++H +
Sbjct: 359 VWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGH 418
Query: 234 VLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVY 293
LRT I D L ++ ++MY KCG V+ A+++F + RD V++ +M+
Sbjct: 419 SLRTG--ILMDKKLVTAFVDMYSKCGNVEYAERIFD-------SSFERDTVMYNAMIAGC 469
Query: 294 GRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPG 353
+G + F++M E G +PD I F+ ++SAC H G V G KYF+SM + ++P
Sbjct: 470 AHHGHEAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPE 529
Query: 354 PEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTIS--MWGALLNACVDCGNIELGKL 411
HY+C++DL +A L KA EL+ +G+ + GA LNAC N EL K
Sbjct: 530 TGHYTCMIDLYGKAYRLDKAIELM-----EGIDQVEKDAVILGAFLNACSWNKNTELVKE 584
Query: 412 AGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
++ L ++ N I ++N YA G WDE+ +R ++ + L GCSW +
Sbjct: 585 VEEKLLVIEGSNGSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANI 639
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 199/475 (41%), Gaps = 85/475 (17%)
Query: 8 FLHQCHVTKNLSAIKKLHGN----------LLRTGTLFFLHDLHTNLI---AAYATCLPK 54
FLH K+ S + + N LLR F L N+ A A +
Sbjct: 8 FLHHIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKF 67
Query: 55 NHLQTLHNFFKCMNSTNPL-HFNVIISNFCR-KGFPFLALTAFSFMH---TNNVPLDTYA 109
N+++ F+ N L +N ++S F + G A+ F MH +++ +D +
Sbjct: 68 NNVKEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFT 127
Query: 110 LCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVK---------- 159
+ + + S+++ +V +G+Q+H + K G + F S+L+ +YSK K
Sbjct: 128 VTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSC 187
Query: 160 ----------------------DAAL-VFDEIPEKN-TVCANALLSGYGEAGLWAQGLEL 195
D AL VF PE N T+ N L++GY + G + L++
Sbjct: 188 VEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKM 247
Query: 196 VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
M LK+D+ + A L + L ++++G+++H+ VL+ S+ F+ S ++++Y
Sbjct: 248 AVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGS--YSNKFVSSGIVDVY 305
Query: 256 GKCGLVKKAQQVFKLDG--------------------VESR----NERSRDVVLWTSMLG 291
KCG +K A+ L G VE++ + +++V+WT+M
Sbjct: 306 CKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFL 365
Query: 292 VYGRNGKYKEVIDLFKEML-EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKL 350
Y + V++L + + E PD + ++V+ AC + G K S +
Sbjct: 366 GYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPG-KEIHGHSLRTGI 424
Query: 351 NPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGN 405
+ + VD+ + G ++ A + + + + M+ A++ C G+
Sbjct: 425 LMDKKLVTAFVDMYSKCGNVEYAERIFDSSFER-----DTVMYNAMIAGCAHHGH 474
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 188 bits (477), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 126/484 (26%), Positives = 235/484 (48%), Gaps = 47/484 (9%)
Query: 17 NLSAIKKLHGNLLRT---GTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPL 73
+ S +K +HG LLRT +F L + P N L + F + + N
Sbjct: 24 SFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQIQNPNLF 83
Query: 74 HFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHV 133
FN++I F P A ++ M + + D + ASS + V G+Q H+ +
Sbjct: 84 VFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQI 143
Query: 134 GKLGWSSSVFVGSALVDLYS-------------------------------KLSSVKDAA 162
+ G+ + V+V ++LV +Y+ K V++A
Sbjct: 144 VRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAR 203
Query: 163 LVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS 222
+FDE+P +N + +++GY + + + ++L M + ++ + + + +C L
Sbjct: 204 EMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLG 263
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRD 282
A+E G + + YV+++ + ++ L ++L++M+ +CG ++KA VF +G+ + S
Sbjct: 264 ALEFGERAYEYVVKSHMTV--NLILGTALVDMFWRCGDIEKAIHVF--EGLPETDSLS-- 317
Query: 283 VVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFE 342
W+S++ +G + + F +M+ G P + F V+SAC H G V G++ +E
Sbjct: 318 ---WSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYE 374
Query: 343 SMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVD 402
+M + + P EHY C+VD+L RAG+L +A + + K + GALL AC
Sbjct: 375 NMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKP----NAPILGALLGACKI 430
Query: 403 CGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCS 462
N E+ + G +++ P ++G +LLSN+YA G WD+I LR ++KE+ ++K G S
Sbjct: 431 YKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWS 490
Query: 463 WVQV 466
+++
Sbjct: 491 LIEI 494
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 122/414 (29%), Positives = 208/414 (50%), Gaps = 52/414 (12%)
Query: 92 LTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDL 151
L F M + + AL + + + ++ +++H +V K G+ + +AL+ +
Sbjct: 279 LKYFHLMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHV 338
Query: 152 YSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG------------------------ 187
Y K VKDA +F +I K N+L++ + +AG
Sbjct: 339 YGKQGKVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKAN 398
Query: 188 --LWA--------QG-----LELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHS 232
W QG LE R+M ++ + T+ L C L A+ LGR++H
Sbjct: 399 VVTWTSVIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHG 458
Query: 233 YVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGV 292
+V+RT+ + ++ +Q++L+ MY KCGL+ + VF+ R +D++ W S++
Sbjct: 459 HVIRTS--MSENILVQNALVNMYAKCGLLSEGSLVFEAI-------RDKDLISWNSIIKG 509
Query: 293 YGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNP 352
YG +G ++ + +F M+ G PDGIA + V+SAC H G V G + F SMS F L P
Sbjct: 510 YGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEP 569
Query: 353 GPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLA 412
EHY+C+VDLL R G L++A E++ + + + GALLN+C N+++ +
Sbjct: 570 QQEHYACIVDLLGRVGFLKEASEIVKNMPMEP----KVCVLGALLNSCRMHKNVDIAEGI 625
Query: 413 GQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+ L+P G +LLSN+Y+ G W+E ++R + K++ L+K G SW++V
Sbjct: 626 ASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEV 679
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 94/179 (52%), Gaps = 1/179 (0%)
Query: 91 ALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVD 150
+L F M + V ++ +C L+ + + +N G++IH HV + S ++ V +ALV+
Sbjct: 418 SLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVN 477
Query: 151 LYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFT 210
+Y+K + + +LVF+ I +K+ + N+++ GYG G + L + +M D
Sbjct: 478 MYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIA 537
Query: 211 LSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFK 269
L A L AC+ VE GR++ Y + +E + ++++ G+ G +K+A ++ K
Sbjct: 538 LVAVLSACSHAGLVEKGREIF-YSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVK 595
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/432 (21%), Positives = 170/432 (39%), Gaps = 56/432 (12%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNS---TNPLHFNVI 78
+++H +L + +F L NLI+ YA L N F+ ++ ++ +N I
Sbjct: 73 RQVHAQVLLSDFIFRSGSLAANLISVYARL---GLLLDARNVFETVSLVLLSDLRLWNSI 129
Query: 79 ISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGW 138
+ G AL + M + D Y L L A + + H V ++G
Sbjct: 130 LKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGL 189
Query: 139 SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRK 198
++ V + L+ LY K + DA +F E+P +N + N ++ G+ + +++
Sbjct: 190 KENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEW 249
Query: 199 MPVLRLKYDQFTLSAAL-----------------------------------RACTGLSA 223
M K D+ T ++ L C L A
Sbjct: 250 MQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFFSVCAELEA 309
Query: 224 VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
+ + ++H YV++ E + +++LI +YGK G VK A+ +F R R++ +
Sbjct: 310 LSIAEKVHGYVIKG--GFEEYLPSRNALIHVYGKQGKVKDAEHLF-------RQIRNKGI 360
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLEE----GIRPDGIAFLTVISACGHTGQVHAGVK 339
W S++ + GK E + LF E+ E ++ + + + +VI C G+ ++
Sbjct: 361 ESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLE 420
Query: 340 YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
YF M K+ C++ + L E+ + M I + AL+N
Sbjct: 421 YFRQMQFS-KVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSE-NILVQNALVNM 478
Query: 400 CVDCGNIELGKL 411
CG + G L
Sbjct: 479 YAKCGLLSEGSL 490
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 188 bits (477), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 210/423 (49%), Gaps = 58/423 (13%)
Query: 78 IISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGK---QIHAHVG 134
+I CR+G A F M NV + +T + N V+ + ++
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRERNV----VTWTTMITGYRQNNRVDVARKLFEVMPEKT 233
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG------- 187
++ W+S + +G Y+ ++DA F+ +P K + NA++ G+GE G
Sbjct: 234 EVSWTS-MLLG------YTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARR 286
Query: 188 -----------LWA-------------QGLELVRKMPVLRLKYDQFTLSAALRACTGLSA 223
W + L+L +M ++ +L + L C L++
Sbjct: 287 VFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLAS 346
Query: 224 VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
++ GRQ+H++++R D DV++ S L+ MY KCG + KA+ VF S+D+
Sbjct: 347 LQYGRQVHAHLVRCQFD--DDVYVASVLMTMYVKCGELVKAKLVFD-------RFSSKDI 397
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFES 343
++W S++ Y +G +E + +F EM G P+ + + +++AC + G++ G++ FES
Sbjct: 398 IMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFES 457
Query: 344 MSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDC 403
M ++F + P EHYSC VD+L RAG++ KA EL+ K ++WGALL AC
Sbjct: 458 MESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKP----DATVWGALLGACKTH 513
Query: 404 GNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSW 463
++L ++A ++ E +P NAG +LLS++ A W ++ +R ++ + K GCSW
Sbjct: 514 SRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSW 573
Query: 464 VQV 466
++V
Sbjct: 574 IEV 576
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 112/236 (47%), Gaps = 7/236 (2%)
Query: 56 HLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLT 115
+ F M + + +I + RKGF AL F+ M V +L S L+
Sbjct: 280 EISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILS 339
Query: 116 ASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVC 175
+ + + +G+Q+HAH+ + + V+V S L+ +Y K + A LVFD K+ +
Sbjct: 340 VCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIM 399
Query: 176 ANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVL 235
N+++SGY GL + L++ +MP ++ TL A L AC+ +E G ++ +
Sbjct: 400 WNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFES-M 458
Query: 236 RTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
+ + V S ++M G+ G V KA ++ +ES + D +W ++LG
Sbjct: 459 ESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL-----IESMTIKP-DATVWGALLG 508
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 92/199 (46%), Gaps = 21/199 (10%)
Query: 146 SALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLK 205
+ LV Y K + +A VF+ +PE+N V A++ GY + G+ + L +MP +
Sbjct: 83 NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRMP----E 138
Query: 206 YDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQ 265
++ + + ++ R+L+ + DV +++I + G V +A+
Sbjct: 139 RNEVSWTVMFGGLIDDGRIDKARKLYDMM------PVKDVVASTNMIGGLCREGRVDEAR 192
Query: 266 QVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVI 325
+F R R+VV WT+M+ Y +N + +D+ +++ E +++ +++
Sbjct: 193 LIFD-------EMRERNVVTWTTMITGYRQNNR----VDVARKLFEVMPEKTEVSWTSML 241
Query: 326 SACGHTGQVHAGVKYFESM 344
+G++ ++FE M
Sbjct: 242 LGYTLSGRIEDAEEFFEVM 260
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/321 (31%), Positives = 182/321 (56%), Gaps = 13/321 (4%)
Query: 148 LVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYD 207
+V Y+ + +V+ A F++ PEK+TV N++++ Y + + + ++L +M + K D
Sbjct: 349 MVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPD 408
Query: 208 QFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQV 267
TL++ L A TGL + LG Q+H V++T + DV + ++LI MY +CG + +++++
Sbjct: 409 PHTLTSLLSASTGLVNLRLGMQMHQIVVKT---VIPDVPVHNALITMYSRCGEIMESRRI 465
Query: 268 FKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISA 327
F + R+V+ W +M+G Y +G E ++LF M GI P I F++V++A
Sbjct: 466 F------DEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNA 519
Query: 328 CGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGN 387
C H G V F SM + +K+ P EHYS LV++ G+ ++A ++ ++
Sbjct: 520 CAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEP--- 576
Query: 388 CTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLR 447
++WGALL+AC N+ L +A + L+P ++ +LL N+YA G+WDE +R
Sbjct: 577 -DKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVR 635
Query: 448 VVIKERGLRKDVGCSWVQVTS 468
+ ++ + ++K+ G SWV ++
Sbjct: 636 MNMESKRIKKERGSSWVDSST 656
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 127/299 (42%), Gaps = 21/299 (7%)
Query: 56 HLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLT 115
++ + F+ + + N + +N +IS + ++ A F M D + ++
Sbjct: 55 YIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFDVMPKR----DVVTWNTMIS 110
Query: 116 ASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVC 175
+ F ++ ++ S F + ++ Y+K + +A L+F+++PE+N V
Sbjct: 111 GYVSCGGIRFLEEARKLFDEMP-SRDSFSWNTMISGYAKNRRIGEALLLFEKMPERNAVS 169
Query: 176 ANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVL 235
+A+++G+ + G + L RKMPV + L A L LS + ++
Sbjct: 170 WSAMITGFCQNGEVDSAVVLFRKMPV-KDSSPLCALVAGLIKNERLSEAAWVLGQYGSLV 228
Query: 236 RTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKL--------DGVESRNERSRDVVLWT 287
D+ V+ ++LI YG+ G V+ A+ +F G E R ++VV W
Sbjct: 229 SGREDL---VYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWN 285
Query: 288 SMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSN 346
SM+ Y + G LF +M + D I++ T+I H ++ F M N
Sbjct: 286 SMIKAYLKVGDVVSARLLFDQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPN 340
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 103/226 (45%), Gaps = 6/226 (2%)
Query: 44 LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNV 103
+++ YA+ +++ ++F+ + + +N II+ + + A+ F M+
Sbjct: 349 MVSGYASV---GNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGE 405
Query: 104 PLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAAL 163
D + L S L+AS+ + ++ G Q+H V K V V +AL+ +YS+ + ++
Sbjct: 406 KPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTV-IPDVPVHNALITMYSRCGEIMESRR 464
Query: 164 VFDEIPEKNTVCA-NALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS 222
+FDE+ K V NA++ GY G ++ L L M + T + L AC
Sbjct: 465 IFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAG 524
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF 268
V+ + ++ + + IE + SSL+ + G ++A +
Sbjct: 525 LVDEAKAQFVSMM-SVYKIEPQMEHYSSLVNVTSGQGQFEEAMYII 569
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/494 (25%), Positives = 228/494 (46%), Gaps = 56/494 (11%)
Query: 16 KNLSAIKKLHGNLLRTGTL---FFLHDLHTNLIAAYATCLP-----KNHLQTLHNFFKCM 67
+ L + + H + +G + F + + N++ A + P K + + F+ +
Sbjct: 15 RTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATSVFRFI 74
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALTAFSF---MHTNNVPLD--TYALCSTLTASSRVND 122
+ + FN II C P +L++ F M +VP D T+ A+ + D
Sbjct: 75 TNPSTFCFNTII-RICTLHEP-SSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKKNGD 132
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCAN----- 177
+ K +H + G S +F + L+ +YS ++ + A +FDE P+++ V N
Sbjct: 133 LTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDG 192
Query: 178 --------------------------ALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTL 211
+L+SGY + + ++L +M L LK D +
Sbjct: 193 LVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAI 252
Query: 212 SAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLD 271
+ L AC + G+ +H Y R I+S FL + L++ Y KCG + A ++F+L
Sbjct: 253 VSTLSACAQSGDWQKGKAIHDYTKRKRLFIDS--FLATGLVDFYAKCGFIDTAMEIFELC 310
Query: 272 GVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHT 331
+ + W +M+ +G + +D F++M+ GI+PDG+ F++V+ C H+
Sbjct: 311 S-------DKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHS 363
Query: 332 GQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTIS 391
G V F+ M + + +N +HY C+ DLL RAG +++A E++ Q G +
Sbjct: 364 GLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLL 423
Query: 392 MWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVI- 450
W LL C GNIE+ + A R L P + G+ ++ +YA W+E+ +R +I
Sbjct: 424 AWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREIID 483
Query: 451 KERGLRKDVGCSWV 464
+++ ++K+VG S V
Sbjct: 484 RDKKVKKNVGFSKV 497
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 132/309 (42%), Gaps = 32/309 (10%)
Query: 12 CHVTKN--LSAIKKLHGNLLRTGTLFFLHDLHT-----NLIAAYATCL------PKNHLQ 58
C KN L+ +K LH LR G L L L+T +LIA + L P+ +
Sbjct: 125 CAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVV 184
Query: 59 TLH----------------NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNN 102
T + F M + + +N +IS + + A+ F M
Sbjct: 185 TYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALG 244
Query: 103 VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAA 162
+ D A+ STL+A ++ D GK IH + + F+ + LVD Y+K + A
Sbjct: 245 LKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAM 304
Query: 163 LVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS 222
+F+ +K NA+++G G ++ RKM +K D T + L C+
Sbjct: 305 EIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSG 364
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRD 282
V+ R L +R+ +D+ ++ + ++ G+ GL+++A ++ + + N
Sbjct: 365 LVDEARNLFDQ-MRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREK-- 421
Query: 283 VVLWTSMLG 291
++ W+ +LG
Sbjct: 422 LLAWSGLLG 430
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 117/421 (27%), Positives = 213/421 (50%), Gaps = 53/421 (12%)
Query: 78 IISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG 137
+I C++G A F M +V + + + ++RV+D + ++
Sbjct: 178 MIHGLCKEGRVDEAREIFDEMSERSV-ITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVS 236
Query: 138 WSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVR 197
W+S + +G Y + ++DA +F+ +P K + NA++SG G+ G A+ +
Sbjct: 237 WTS-MLMG------YVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFD 289
Query: 198 KMP---------VLRL---------KYDQF-------------TLSAALRACTGLSAVEL 226
M V+++ D F TL + L C L+++
Sbjct: 290 SMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHH 349
Query: 227 GRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLW 286
G+Q+H+ ++R D+ DV++ S L+ MY KCG + K++ +F S+D+++W
Sbjct: 350 GKQVHAQLVRCQFDV--DVYVASVLMTMYIKCGELVKSKLIFD-------RFPSKDIIMW 400
Query: 287 TSMLGVYGRNGKYKEVIDLFKEM-LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMS 345
S++ Y +G +E + +F EM L +P+ + F+ +SAC + G V G+K +ESM
Sbjct: 401 NSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESME 460
Query: 346 NEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGN 405
+ F + P HY+C+VD+L RAG +A E+++ + ++WG+LL AC
Sbjct: 461 SVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEP----DAAVWGSLLGACRTHSQ 516
Query: 406 IELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
+++ + ++ +E++P N+G ILLSN+YA G W ++ LR ++K R +RK GCSW +
Sbjct: 517 LDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTE 576
Query: 466 V 466
V
Sbjct: 577 V 577
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 109/239 (45%), Gaps = 8/239 (3%)
Query: 54 KNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCST 113
K + F M N + +I R GF AL F M V L S
Sbjct: 278 KGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISI 337
Query: 114 LTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNT 173
L+ + + ++ GKQ+HA + + + V+V S L+ +Y K + + L+FD P K+
Sbjct: 338 LSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDI 397
Query: 174 VCANALLSGYGEAGLWAQGLELVRKMPVL-RLKYDQFTLSAALRACTGLSAVELGRQLHS 232
+ N+++SGY GL + L++ +MP+ K ++ T A L AC+ VE G +++
Sbjct: 398 IMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE 457
Query: 233 YVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
+ + ++ + +++M G+ G +A ++ VE D +W S+LG
Sbjct: 458 S-MESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEP------DAAVWGSLLG 509
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 105/235 (44%), Gaps = 30/235 (12%)
Query: 146 SALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLK 205
+ LV Y K + +A VFD +PE+N V AL+ GY G L KMP +
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP----E 138
Query: 206 YDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQ 265
++ + + L ++ +L+ + + D ++S+I K G V +A+
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIP------DKDNIARTSMIHGLCKEGRVDEAR 192
Query: 266 QVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVI 325
++F + +ERS V+ WT+M+ YG+N + + +F M E+ +++ +++
Sbjct: 193 EIF-----DEMSERS--VITWTTMVTGYGQNNRVDDARKIFDVMPEKT----EVSWTSML 241
Query: 326 SACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSC--LVDLLCRAGELQKAWELLN 378
G++ + FE M P +C ++ L + GE+ KA + +
Sbjct: 242 MGYVQNGRIEDAEELFEVM-------PVKPVIACNAMISGLGQKGEIAKARRVFD 289
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 119/374 (31%), Positives = 194/374 (51%), Gaps = 16/374 (4%)
Query: 95 FSFMHTNNVPLDT-YALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYS 153
F + +NV + T A+ L +R D++ G+ +H + K G+ + V + ++ Y+
Sbjct: 295 FQMLVNDNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYA 354
Query: 154 KLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSA 213
K S+ DA F EI K+ + N+L++G + L +M ++ D TL
Sbjct: 355 KYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLG 414
Query: 214 ALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGV 273
L AC+ L+A+ G H Y + H + + ++L++MY KCG + A++VF
Sbjct: 415 VLTACSHLAALGHGSSCHGYCV--VHGYAVNTSICNALMDMYTKCGKLDVAKRVFD---- 468
Query: 274 ESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQ 333
RD+V W +ML +G +G KE + LF M E G+ PD + L ++SAC H+G
Sbjct: 469 ---TMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGL 525
Query: 334 VHAGVKYFESMSN-EFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISM 392
V G + F SMS +F + P +HY+C+ DLL RAG L +A++ +N+ ++ I +
Sbjct: 526 VDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEP----DIRV 581
Query: 393 WGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKE 452
G LL+AC N ELG ++ L + +LLSN Y+ W++ +R++ K+
Sbjct: 582 LGTLLSACWTYKNAELGNEVSKKMQSLGETTESL-VLLSNTYSAAERWEDAARIRMIQKK 640
Query: 453 RGLRKDVGCSWVQV 466
RGL K G SWV V
Sbjct: 641 RGLLKTPGYSWVDV 654
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 159/341 (46%), Gaps = 25/341 (7%)
Query: 6 IQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFK 65
+ L C ++NL + +H +LL+ + NL YA+C N ++ + F
Sbjct: 3 LSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVNLTRLYASC---NEVELARHVFD 59
Query: 66 CMN--STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
+ NP+ ++++I + F AL + M + V Y L A + + +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
+ GK IH+HV +++ ++V +ALVD Y+K ++ A VFDE+P+++ V NA++SG+
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 184 GEAGLWAQGLELVRKMPVLR-LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
+ L M + L + T+ A A+ G+ +H Y R
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM--GFS 237
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
+D+ +++ ++++Y K + A++VF LD +NE V W++M+G Y N KE
Sbjct: 238 NDLVVKTGILDVYAKSKCIIYARRVFDLDF--KKNE-----VTWSAMIGGYVENEMIKEA 290
Query: 303 IDLFKEMLEEGIRPDGIAFLT------VISACGHTGQVHAG 337
++F +ML D +A +T ++ C G + G
Sbjct: 291 GEVFFQMLVN----DNVAMVTPVAIGLILMGCARFGDLSGG 327
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 91/192 (47%)
Query: 73 LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAH 132
+ +N +I+ P + F M T+ + D L LTA S + + G H +
Sbjct: 375 ISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGY 434
Query: 133 VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQG 192
G++ + + +AL+D+Y+K + A VFD + +++ V N +L G+G GL +
Sbjct: 435 CVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEA 494
Query: 193 LELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLI 252
L L M + D+ TL A L AC+ V+ G+QL + + R ++ + + +
Sbjct: 495 LSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMT 554
Query: 253 EMYGKCGLVKKA 264
++ + G + +A
Sbjct: 555 DLLARAGYLDEA 566
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 83/189 (43%), Gaps = 11/189 (5%)
Query: 215 LRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVE 274
L C + LG+ +H ++L+ + + S L +L +Y C V+ A+ VF E
Sbjct: 6 LETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVL-VNLTRLYASCNEVELARHVFD----E 60
Query: 275 SRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQV 334
+ R + W M+ Y N ++ +DL+ +ML G+RP + V+ AC +
Sbjct: 61 IPHPRINPIA-WDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 335 HAGVKYFESMSNEFKLNPGPEHYSC--LVDLLCRAGELQKAWELLNQTLYKGMGNCTISM 392
G K S N + Y C LVD + GEL+ A ++ ++ + M +
Sbjct: 120 DDG-KLIHSHVNCSDF--ATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMI 176
Query: 393 WGALLNACV 401
G L+ C+
Sbjct: 177 SGFSLHCCL 185
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/453 (29%), Positives = 225/453 (49%), Gaps = 43/453 (9%)
Query: 23 KLHGNLLRTGTLFFLHDLH--TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIIS 80
+LH + R G F D++ T ++ YA + N F M + + + +IS
Sbjct: 99 QLHSQIWRFG---FCADMYVSTGVVDMYAKF---GKMGCARNAFDEMPHRSEVSWTALIS 152
Query: 81 NFCRKGFPFLALTAFSFM-HTNNVP-----LDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+ R G LA F M H +V +D + +T++ R+ F + H V
Sbjct: 153 GYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL----FDEMTHKTV- 207
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
+ W++ ++ Y + + A +FD +PE+N V N ++ GY + +G+
Sbjct: 208 -ITWTT-------MIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIR 259
Query: 195 LVRKM-PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIE 253
L ++M L D T+ + L A + A+ LG H +V R ++ V + +++++
Sbjct: 260 LFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKK--LDKKVKVCTAILD 317
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
MY KCG ++KA+++F + V W +M+ Y NG + +DLF M+ E
Sbjct: 318 MYSKCGEIEKAKRIFD-------EMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIEE 370
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
+PD I L VI+AC H G V G K+F M E LN EHY C+VDLL RAG L++A
Sbjct: 371 -KPDEITMLAVITACNHGGLVEEGRKWFHVM-REMGLNAKIEHYGCMVDLLGRAGSLKEA 428
Query: 374 WELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNL 433
+L+ ++ G + + L+AC +IE + ++A+EL+P N G +LL NL
Sbjct: 429 EDLITNMPFEPNG----IILSSFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNL 484
Query: 434 YARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
YA WD+ G ++ V+++ +K+VGCS +++
Sbjct: 485 YAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEI 517
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 142/296 (47%), Gaps = 24/296 (8%)
Query: 112 STLTASSRVNDVNF-GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE 170
+TLT S ++ + G Q+H+ + + G+ + ++V + +VD+Y+K + A FDE+P
Sbjct: 82 TTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEMPH 141
Query: 171 KNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQL 230
++ V AL+SGY G +L +MP ++ D +A + + R+L
Sbjct: 142 RSEVSWTALISGYIRCGELDLASKLFDQMPHVK---DVVIYNAMMDGFVKSGDMTSARRL 198
Query: 231 HSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSML 290
+ T V +++I Y + A+++F D + RN +V W +M+
Sbjct: 199 FDEMTHKT------VITWTTMIHGYCNIKDIDAARKLF--DAMPERN-----LVSWNTMI 245
Query: 291 GVYGRNGKYKEVIDLFKEM-LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFK 349
G Y +N + +E I LF+EM + PD + L+V+ A TG + G ++ K
Sbjct: 246 GGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLG-EWCHCFVQRKK 304
Query: 350 LNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGN 405
L+ + + ++D+ + GE++KA + ++ M ++ W A+++ GN
Sbjct: 305 LDKKVKVCTAILDMYSKCGEIEKA-----KRIFDEMPEKQVASWNAMIHGYALNGN 355
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 120/278 (43%), Gaps = 27/278 (9%)
Query: 161 AALVFDEIPEKN-TVCANALLSGYGEAGLWAQGLELVRKMPVLR-LKYDQFTLSAALRAC 218
A +FD+ P+++ + +N+++ Y E + L R + D FT + ++C
Sbjct: 29 ARKLFDQRPQRDDSFLSNSMIKAYLETRQYPDSFALYRDLRKETCFAPDNFTFTTLTKSC 88
Query: 219 TGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNE 278
+ V G QLHS + R +D+++ + +++MY K G + A+ F D + R+E
Sbjct: 89 SLSMCVYQGLQLHSQIWR--FGFCADMYVSTGVVDMYAKFGKMGCARNAF--DEMPHRSE 144
Query: 279 RSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGV 338
V WT+++ Y R G+ LF +M D + + ++ +G + +
Sbjct: 145 -----VSWTALISGYIRCGELDLASKLFDQMPH---VKDVVIYNAMMDGFVKSGDMTSAR 196
Query: 339 KYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLN 398
+ F+ M+++ + ++ ++ C ++ A + L+ M + W ++
Sbjct: 197 RLFDEMTHKTVIT-----WTTMIHGYCNIKDIDAA-----RKLFDAMPERNLVSWNTMIG 246
Query: 399 A-CVDCGNIELGKL--AGQRALELDPHNAGICILLSNL 433
C + E +L Q LDP + I +L +
Sbjct: 247 GYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAI 284
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 142/519 (27%), Positives = 239/519 (46%), Gaps = 87/519 (16%)
Query: 16 KNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHF 75
KN+ +K++H +++ G + L + LI + + +P L+ H F + +
Sbjct: 23 KNIRTLKQIHASMVVNGLMSNL-SVVGELIYSASLSVP-GALKYAHKLFDEIPKPDVSIC 80
Query: 76 NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASS----RVNDVNF-GKQI- 129
N ++ + P ++ ++ M V D Y L A S R N F GK +
Sbjct: 81 NHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVR 140
Query: 130 ----------------HAHVGKLGWSSSVFVGSA---------LVDLYSKLSSVKDAALV 164
HA+ G LG +S +F SA + Y+K + +A +
Sbjct: 141 HGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRL 200
Query: 165 FDEIP-------------------------------EKNTVCANALLSGYGEAGLWAQGL 193
FDE+P EK+ V NA++SGY G + L
Sbjct: 201 FDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEAL 260
Query: 194 ELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQS---- 249
+ ++M D T+ + L AC L +E G++LH Y+L T + S +++ +
Sbjct: 261 GIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETA-SVSSSIYVGTPIWN 319
Query: 250 SLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSM---LGVYGRNGKYKEVIDLF 306
+LI+MY KCG + +A +VF R + RD+ W ++ L ++ G I++F
Sbjct: 320 ALIDMYAKCGSIDRAIEVF-------RGVKDRDLSTWNTLIVGLALHHAEGS----IEMF 368
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
+EM + P+ + F+ VI AC H+G+V G KYF M + + + P +HY C+VD+L R
Sbjct: 369 EEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGR 428
Query: 367 AGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGI 426
AG+L++A+ + K N + W LL AC GN+ELGK A ++ L + +G
Sbjct: 429 AGQLEEAFMFVESM--KIEPNAIV--WRTLLGACKIYGNVELGKYANEKLLSMRKDESGD 484
Query: 427 CILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
+LLSN+YA G WD + +R + + ++K G S ++
Sbjct: 485 YVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIE 523
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 122/428 (28%), Positives = 213/428 (49%), Gaps = 54/428 (12%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMH 99
+ + LI YA C +++ + M + + +N +I R+G AL+ F MH
Sbjct: 264 VQSALIDMYAKC---REMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMH 320
Query: 100 TNNVPLDTYALCSTLT--ASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSS 157
++ +D + + S L A SR ++ H + K G+++ V +ALVD+Y+K
Sbjct: 321 ERDMKIDDFTIPSILNCFALSRT-EMKIASSAHCLIVKTGYATYKLVNNALVDMYAKRGI 379
Query: 158 VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRA 217
+ A VF+ + EK+ + AL++G G + + L+L M V + D+ ++ L A
Sbjct: 380 MDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSA 439
Query: 218 CTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRN 277
L+ +E G+Q+H +++ S + + +SL+ MY KCG ++ A +F +
Sbjct: 440 SAELTLLEFGQQVHGNYIKS--GFPSSLSVNNSLVTMYTKCGSLEDANVIFN-------S 490
Query: 278 ERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
RD++ WT ++ Y +NG +LE+ R
Sbjct: 491 MEIRDLITWTCLIVGYAKNG-----------LLEDAQR---------------------- 517
Query: 338 VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
YF+SM + + PGPEHY+C++DL R+G+ K +LL+Q + ++W A+L
Sbjct: 518 --YFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEP----DATVWKAIL 571
Query: 398 NACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRK 457
A GNIE G+ A + +EL+P+NA + LSN+Y+ G DE ++R ++K R + K
Sbjct: 572 AASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNISK 631
Query: 458 DVGCSWVQ 465
+ GCSWV+
Sbjct: 632 EPGCSWVE 639
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 172/367 (46%), Gaps = 42/367 (11%)
Query: 44 LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNV 103
+I AY+ L F+ N + +N +IS +C+ G A F M ++ +
Sbjct: 65 MIVAYSN---SRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSDGI 121
Query: 104 PLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAAL 163
+ Y L S L + + + G+QIH H K G+ V V + L+ +Y++ + +A
Sbjct: 122 KPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEY 181
Query: 164 VFDEIP-EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS 222
+F+ + EKN V ++L+GY + G + +E R + + +Q+T + L AC +S
Sbjct: 182 LFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVS 241
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRD 282
A +G Q+H ++++ ++++++QS+LI+MY KC ++ A+ + L+G+E D
Sbjct: 242 ACRVGVQVHCCIVKS--GFKTNIYVQSALIDMYAKCREMESARAL--LEGME-----VDD 292
Query: 283 VVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTV------------ISACGH 330
VV W SM+ R G E + +F M E ++ D ++ I++ H
Sbjct: 293 VVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAH 352
Query: 331 TGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTI 390
V G ++ ++N LVD+ + G + A + +++GM +
Sbjct: 353 CLIVKTGYATYKLVNN------------ALVDMYAKRGIMDSALK-----VFEGMIEKDV 395
Query: 391 SMWGALL 397
W AL+
Sbjct: 396 ISWTALV 402
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 150/311 (48%), Gaps = 21/311 (6%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTN----LIAAYATCLPKNHLQTLHNFFKCMN-STNPLHFN 76
+++HG+ ++TG DL N L+A YA C + F+ M N + +
Sbjct: 145 EQIHGHTIKTG-----FDLDVNVVNGLLAMYAQC---KRISEAEYLFETMEGEKNNVTWT 196
Query: 77 VIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKL 136
+++ + + GF F A+ F + + Y S LTA + V+ G Q+H + K
Sbjct: 197 SMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKS 256
Query: 137 GWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELV 196
G+ ++++V SAL+D+Y+K ++ A + + + + V N+++ G GL + L +
Sbjct: 257 GFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMF 316
Query: 197 RKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYG 256
+M +K D FT+ + L C LS E+ ++ L + + ++L++MY
Sbjct: 317 GRMHERDMKIDDFTIPSILN-CFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMYA 375
Query: 257 KCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRP 316
K G++ A +VF+ +DV+ WT+++ NG Y E + LF M GI P
Sbjct: 376 KRGIMDSALKVFE-------GMIEKDVISWTALVTGNTHNGSYDEALKLFCNMRVGGITP 428
Query: 317 DGIAFLTVISA 327
D I +V+SA
Sbjct: 429 DKIVTASVLSA 439
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 134/265 (50%), Gaps = 16/265 (6%)
Query: 143 FVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVL 202
F + ++ YS + DA +F P KNT+ NAL+SGY ++G + L +M
Sbjct: 60 FTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD 119
Query: 203 RLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVK 262
+K +++TL + LR CT L + G Q+H + ++T D+ DV + + L+ MY +C +
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDL--DVNVVNGLLAMYAQCKRIS 177
Query: 263 KAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFL 322
+A+ +F+ E N V WTSML Y +NG + I+ F+++ EG + + F
Sbjct: 178 EAEYLFETMEGEKNN------VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFP 231
Query: 323 TVISACGHTGQVHAGVKYFESM-SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTL 381
+V++AC GV+ + + FK N + S L+D+ + E++ A LL
Sbjct: 232 SVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQ--SALIDMYAKCREMESARALL---- 285
Query: 382 YKGMGNCTISMWGALLNACVDCGNI 406
+GM + W +++ CV G I
Sbjct: 286 -EGMEVDDVVSWNSMIVGCVRQGLI 309
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 186 bits (471), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/462 (27%), Positives = 226/462 (48%), Gaps = 31/462 (6%)
Query: 12 CHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTN-LIAAYATCLPKNH-LQTLHNFFKCMNS 69
C + + K+ HG L+ G + H+ N L+ Y+ C ++ L + C S
Sbjct: 146 CSNSGRIEEGKQFHGCFLKYGLI--SHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLS 203
Query: 70 TNPLHFNVIISNFC-----RKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVN 124
F+ +S + ++G L TA NN+ TY S+L S + D+N
Sbjct: 204 V----FSSALSGYLECGAFKEGLDVLRKTANEDFVWNNL---TY--LSSLRLFSNLRDLN 254
Query: 125 FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYG 184
Q+H+ + + G+++ V AL+++Y K V A VFD+ +N ++ Y
Sbjct: 255 LALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYF 314
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESD 244
+ + + L L KM + +++T + L + LS ++ G LH VL++ + +
Sbjct: 315 QDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGY--RNH 372
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVID 304
V + ++L+ MY K G ++ A++ F RD+V W +M+ +G +E ++
Sbjct: 373 VMVGNALVNMYAKSGSIEDARKAFS-------GMTFRDIVTWNTMISGCSHHGLGREALE 425
Query: 305 LFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLL 364
F M+ G P+ I F+ V+ AC H G V G+ YF + +F + P +HY+C+V LL
Sbjct: 426 AFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLL 485
Query: 365 CRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNA 424
+AG + A + + + + W LLNAC N LGK + A+E P+++
Sbjct: 486 SKAGMFKDAEDFMRTAPIE----WDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDS 541
Query: 425 GICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
G+ +LLSN++A+ W+ + +R ++ RG++K+ G SW+ +
Sbjct: 542 GVYVLLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGI 583
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 130/285 (45%), Gaps = 14/285 (4%)
Query: 100 TNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSS---SVFVGSALVDLYSKLS 156
+ P L L + + + G+ IHAH+ SS + ++L++LY K
Sbjct: 24 SKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCR 83
Query: 157 SVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVL-RLKYDQFTLSAAL 215
A +FD +PE+N V A++ GY +G + L+L + M + ++F +
Sbjct: 84 ETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVF 143
Query: 216 RACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVES 275
++C+ +E G+Q H L+ + + S F++++L+ MY C +A +V LD +
Sbjct: 144 KSCSNSGRIEEGKQFHGCFLK--YGLISHEFVRNTLVYMYSLCSGNGEAIRV--LDDLP- 198
Query: 276 RNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVH 335
D+ +++S L Y G +KE +D+ ++ E + + +L+ + + ++
Sbjct: 199 ----YCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLN 254
Query: 336 AGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQT 380
++ M F N E L+++ + G++ A + + T
Sbjct: 255 LALQVHSRMV-RFGFNAEVEACGALINMYGKCGKVLYAQRVFDDT 298
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 229/463 (49%), Gaps = 41/463 (8%)
Query: 17 NLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFN 76
+ S IK+L + L G F L + L+ A P L F+ + +N
Sbjct: 15 SFSQIKQLQSHFLTAGH-FQSSFLRSRLLERCAIS-PFGDLSFAVQIFRYIPKPLTNDWN 72
Query: 77 VIISNFCRKGFPFLALTAFSFMHTNNVP------LDTYALCSTLTASSRVNDVNFGKQIH 130
II F P LA + + M + +D TL A +R + Q+H
Sbjct: 73 AIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLH 132
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWA 190
+ + G S+ + + L+D YSK + A +FDE+P ++ NAL++G +
Sbjct: 133 CQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRAS 192
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQL-HSYVLRTTHDIESDVFLQS 249
+ +EL ++M ++ + T+ AAL AC+ L V+ G + H Y +V + +
Sbjct: 193 EAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-------NDNVIVSN 245
Query: 250 SLIEMYGKCGLVKKAQQVF-KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
+ I+MY KCG V KA QVF + G +S VV W +M+ + +G+ +++F +
Sbjct: 246 AAIDMYSKCGFVDKAYQVFEQFTGKKS-------VVTWNTMITGFAVHGEAHRALEIFDK 298
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAG 368
+ + GI+PD +++L ++AC H G V G+ F +M+ + + +HY C+VDLL RAG
Sbjct: 299 LEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAG 357
Query: 369 ELQKAWELLNQTLYKGMGNCTISM------WGALLNACVDCGNIELGKLAGQRALELDPH 422
L++A +++ C++SM W +LL A ++E+ ++A + E+ +
Sbjct: 358 RLREAHDII----------CSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVN 407
Query: 423 NAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
N G +LLSN+YA G W ++G +R ++ + ++K G S+++
Sbjct: 408 NDGDFVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIE 450
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 214/418 (51%), Gaps = 24/418 (5%)
Query: 52 LPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALC 111
+ + + N F+ M + + + ++ + G A F M N+ + A+
Sbjct: 182 VQRGRIDEAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI-ISWNAMI 240
Query: 112 STLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK 171
+ ++R+++ + Q+ W++ ++ + + + A +FD +PEK
Sbjct: 241 TGYAQNNRIDEADQLFQVMPERDFASWNT-------MITGFIRNREMNKACGLFDRMPEK 293
Query: 172 NTVCANALLSGYGEAGLWAQGLELVRKMPVLR---LKYDQFTLSAALRACTGLSAVELGR 228
N + +++GY E + L + KM LR +K + T + L AC+ L+ + G+
Sbjct: 294 NVISWTTMITGYVENKENEEALNVFSKM--LRDGSVKPNVGTYVSILSACSDLAGLVEGQ 351
Query: 229 QLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTS 288
Q+H + ++ H + + + S+L+ MY K G + A+++F +G+ + RD++ W S
Sbjct: 352 QIHQLISKSVH--QKNEIVTSALLNMYSKSGELIAARKMFD-NGLVCQ----RDLISWNS 404
Query: 289 MLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEF 348
M+ VY +G KE I+++ +M + G +P + +L ++ AC H G V G+++F+ + +
Sbjct: 405 MIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDE 464
Query: 349 KLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIEL 408
L EHY+CLVDL RAG L+ +N + + S +GA+L+AC + +
Sbjct: 465 SLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDAR----LSRSFYGAILSACNVHNEVSI 520
Query: 409 GKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
K ++ LE +AG +L+SN+YA G +E +R+ +KE+GL+K GCSWV+V
Sbjct: 521 AKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKV 578
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/334 (19%), Positives = 148/334 (44%), Gaps = 30/334 (8%)
Query: 106 DTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVF 165
D +T ++ D+ +++ V +V +A+V Y + + A ++F
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQLSIAEMLF 132
Query: 166 DEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVE 225
E+PE+N V N ++ GY ++G + LEL +MP + + + ++ ++A ++
Sbjct: 133 QEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRID 188
Query: 226 LGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVL 285
L + R DV +++++ K G V +A+++F D + RN ++
Sbjct: 189 EAMNLFERMPR------RDVVSWTAMVDGLAKNGKVDEARRLF--DCMPERN-----IIS 235
Query: 286 WTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMS 345
W +M+ Y +N + E LF+ M E D ++ T+I+ +++ F+ M
Sbjct: 236 WNAMITGYAQNNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMP 291
Query: 346 NEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGN 405
+ ++ ++ ++ E ++A + ++ L G + + ++L+AC D
Sbjct: 292 EKNVIS-----WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAG 346
Query: 406 IELGKLAGQR-ALELDPHNAGICILLSNLYARFG 438
+ G+ Q + + N + L N+Y++ G
Sbjct: 347 LVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSG 380
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 210/453 (46%), Gaps = 77/453 (16%)
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
M N +N + F P +L + M ++V +Y S + ASS + FG
Sbjct: 831 MQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFAS--RFG 888
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE---------------- 170
+ + AH+ K G+ V + + L+D YS +++A VFDE+PE
Sbjct: 889 ESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRV 948
Query: 171 ---------------KNTVCANALLSGYGEAGLWAQGLELVRKMPVLRL----------- 204
KN +N L++GY G Q L +MPV +
Sbjct: 949 LDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYS 1008
Query: 205 ---KY-----------------DQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESD 244
+Y D+ T+S + AC L +E+G+++H Y L+ + D
Sbjct: 1009 QNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVL--D 1066
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVID 304
V++ S+L++MY KCG +++A VF N +++ W S++ +G +E +
Sbjct: 1067 VYIGSALVDMYSKCGSLERALLVF-------FNLPKKNLFCWNSIIEGLAAHGFAQEALK 1119
Query: 305 LFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLL 364
+F +M E ++P+ + F++V +AC H G V G + + SM +++ + EHY +V L
Sbjct: 1120 MFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLF 1179
Query: 365 CRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNA 424
+AG + +A EL+ ++ N I WGALL+ C N+ + ++A + + L+P N+
Sbjct: 1180 SKAGLIYEALELIGNMEFE--PNAVI--WGALLDGCRIHKNLVIAEIAFNKLMVLEPMNS 1235
Query: 425 GICILLSNLYARFGMWDEIGHLRVVIKERGLRK 457
G LL ++YA W ++ +R ++E G+ K
Sbjct: 1236 GYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEK 1268
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 117/235 (49%), Gaps = 7/235 (2%)
Query: 56 HLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLT 115
+L+ + F M + + + +I + + A+ F M + D + + ++
Sbjct: 981 NLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVIS 1040
Query: 116 ASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVC 175
A + + + GK++H + + G+ V++GSALVD+YSK S++ A LVF +P+KN C
Sbjct: 1041 ACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFC 1100
Query: 176 ANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVL 235
N+++ G G + L++ KM + +K + T + ACT V+ GR+++ ++
Sbjct: 1101 WNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMI 1160
Query: 236 RTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSML 290
+ I S+V ++ ++ K GL+ +A ++ E + V+W ++L
Sbjct: 1161 -DDYSIVSNVEHYGGMVHLFSKAGLIYEALELI------GNMEFEPNAVIWGALL 1208
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 100/318 (31%), Positives = 167/318 (52%), Gaps = 11/318 (3%)
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV 120
F M N + +N ++ + AL + M +D L L S +
Sbjct: 349 RELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGI 408
Query: 121 NDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE-KNTVCANAL 179
+DV GKQ H + + G+ ++V V +AL+D+Y K +++ A + F ++ E ++ V NAL
Sbjct: 409 SDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNAL 468
Query: 180 LSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTH 239
L+G G Q L M V K ++TL+ L C + A+ LG+ +H +++R +
Sbjct: 469 LTGVARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGY 527
Query: 240 DIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKY 299
I DV ++ ++++MY KC A +VFK +RD++LW S++ RNG+
Sbjct: 528 KI--DVVIRGAMVDMYSKCRCFDYAIEVFK-------EAATRDLILWNSIIRGCCRNGRS 578
Query: 300 KEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSC 359
KEV +LF + EG++PD + FL ++ AC G V G +YF SMS ++ ++P EHY C
Sbjct: 579 KEVFELFMLLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDC 638
Query: 360 LVDLLCRAGELQKAWELL 377
+++L C+ G L + E L
Sbjct: 639 MIELYCKYGCLHQLEEFL 656
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 198/462 (42%), Gaps = 75/462 (16%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L C + +L +++LH +++ G + DL T+++ Y C + F +
Sbjct: 169 LKSCGLILDLRLLRQLHCAVVKYGYSGNV-DLETSIVDVYGKC---RVMSDARRVFDEIV 224
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
+ + + +NVI+ + GF A+ F M NV + + S + A SR + GK
Sbjct: 225 NPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKV 284
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDE--------------------- 167
IHA KL + V +++ D+Y K ++ A VFD+
Sbjct: 285 IHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGL 344
Query: 168 ----------IPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRA 217
+PE+N V NA+L GY A W + L+ + M D TL L
Sbjct: 345 TREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNV 404
Query: 218 CTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRN 277
C+G+S V++G+Q H ++ R H +++V + ++L++MYGKCG ++ A F+ +
Sbjct: 405 CSGISDVQMGKQAHGFIYR--HGYDTNVIVANALLDMYGKCGTLQSANIWFR------QM 456
Query: 278 ERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
RD V W ++L R G+ ++ + F+ M E +P T+++ C + ++ G
Sbjct: 457 SELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGCANIPALNLG 515
Query: 338 ----------------------------VKYFESMSNEFKLNPGPE--HYSCLVDLLCRA 367
+ F+ FK + ++ ++ CR
Sbjct: 516 KAIHGFLIRDGYKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRN 575
Query: 368 GELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELG 409
G ++ +EL +G+ ++ G +L AC+ G++ELG
Sbjct: 576 GRSKEVFELFMLLENEGVKPDHVTFLG-ILQACIREGHVELG 616
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 130/270 (48%), Gaps = 12/270 (4%)
Query: 45 IAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVP 104
I AY C + F+ M + +N +I+ + G F M+ + V
Sbjct: 103 IEAYGKC---GCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVR 159
Query: 105 LDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALV 164
+ L + + D+ +Q+H V K G+S +V + +++VD+Y K + DA V
Sbjct: 160 ATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRV 219
Query: 165 FDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAV 224
FDEI + V N ++ Y E G + + + KM L ++ T+S+ + AC+ A+
Sbjct: 220 FDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLAL 279
Query: 225 ELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVV 284
E+G+ +H+ ++ + + +D + +S+ +MY KC ++ A++VF RS+D+
Sbjct: 280 EVGKVIHAIAVKLS--VVADTVVSTSVFDMYVKCDRLESARRVFD-------QTRSKDLK 330
Query: 285 LWTSMLGVYGRNGKYKEVIDLFKEMLEEGI 314
WTS + Y +G +E +LF M E I
Sbjct: 331 SWTSAMSGYAMSGLTREARELFDLMPERNI 360
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 135/269 (50%), Gaps = 10/269 (3%)
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
+++ +H+ +F+ + ++ Y K V DA +F+E+PE++ NA+++ +
Sbjct: 80 ARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQ 139
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
G+ + + R+M ++ + + + L++C + + L RQLH V++ + +V
Sbjct: 140 NGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVK--YGYSGNV 197
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
L++S++++YGKC ++ A++VF D + + ++ V W ++ Y G E + +
Sbjct: 198 DLETSIVDVYGKCRVMSDARRVF--DEIVNPSD-----VSWNVIVRRYLEMGFNDEAVVM 250
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLC 365
F +MLE +RP +V+ AC + + G K +++ + + + + D+
Sbjct: 251 FFKMLELNVRPLNHTVSSVMLACSRSLALEVG-KVIHAIAVKLSVVADTVVSTSVFDMYV 309
Query: 366 RAGELQKAWELLNQTLYKGMGNCTISMWG 394
+ L+ A + +QT K + + T +M G
Sbjct: 310 KCDRLESARRVFDQTRSKDLKSWTSAMSG 338
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 135/472 (28%), Positives = 232/472 (49%), Gaps = 43/472 (9%)
Query: 4 SIIQFLHQCHVTKNLSAIKK---LHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTL 60
S I+ L Q H +LS+++ + L+R +L DL A+A L L
Sbjct: 24 SSIKHLLQIHGQIHLSSLQNDSFIISELVRVSSLSLAKDL------AFARTL------LL 71
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV 120
H+ + + P +N++ + P ++ +S M + + L A +
Sbjct: 72 HS-----SDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASF 126
Query: 121 NDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALL 180
+ G+QI V K G+ V+VG+ L+ LY DA VFDE+ E+N V N+++
Sbjct: 127 LGLTAGRQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIM 186
Query: 181 SGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD 240
+ E G E +M R D+ T+ L AC G + LG+ +HS V+ +
Sbjct: 187 TALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACGG--NLSLGKLVHSQVM--VRE 242
Query: 241 IESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNER--SRDVVLWTSMLGVYGRNGK 298
+E + L ++L++MY K G ++ A+ VF ER ++V W++M+ + G
Sbjct: 243 LELNCRLGTALVDMYAKSGGLEYARLVF---------ERMVDKNVWTWSAMIVGLAQYGF 293
Query: 299 YKEVIDLFKEMLEEG-IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY 357
+E + LF +M++E +RP+ + FL V+ AC HTG V G KYF M K+ P HY
Sbjct: 294 AEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHY 353
Query: 358 SCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACV---DCGNIELGKLAGQ 414
+VD+L RAG L +A++ + + ++ +W LL+AC D + +G+ +
Sbjct: 354 GAMVDILGRAGRLNEAYDFIKKMPFEP----DAVVWRTLLSACSIHHDEDDEGIGEKVKK 409
Query: 415 RALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
R +EL+P +G ++++N +A MW E +R V+KE ++K G S +++
Sbjct: 410 RLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLEL 461
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 110/389 (28%), Positives = 195/389 (50%), Gaps = 38/389 (9%)
Query: 105 LDTYALCSTLTASSRVNDVNFGKQI---------HAHVGKLGWSSSVFVGSALVDLYSKL 155
+D YA C ++ + +V D K + +A G G + +F G L + +
Sbjct: 417 MDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNV 476
Query: 156 -------------SSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWAQGLELVRK 198
V +A +F ++ N + +++G + G + + +RK
Sbjct: 477 ITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRK 536
Query: 199 MPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC 258
M L+ + F+++ AL AC L+++ +GR +H Y++R S V +++SL++MY KC
Sbjct: 537 MQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQH-SSLVSIETSLVDMYAKC 595
Query: 259 GLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDG 318
G + KA++VF ++ ++ L +M+ Y G KE I L++ + G++PD
Sbjct: 596 GDINKAEKVFG-------SKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDN 648
Query: 319 IAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLN 378
I V+SAC H G ++ ++ F + ++ + P EHY +VDLL AGE +KA L+
Sbjct: 649 ITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIE 708
Query: 379 QTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFG 438
+ +K M +L+ +C EL ++ LE +P N+G + +SN YA G
Sbjct: 709 EMPFKP----DARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEG 764
Query: 439 MWDEIGHLRVVIKERGLRKDVGCSWVQVT 467
WDE+ +R ++K +GL+K GCSW+Q+T
Sbjct: 765 SWDEVVKMREMMKAKGLKKKPGCSWIQIT 793
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 184/399 (46%), Gaps = 19/399 (4%)
Query: 7 QFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHD-LHTNLIAAYATCLPKNHLQTLHNFFK 65
+ L C ++LS K++H +L+ G + ++ + T L+ YA C + L+ F
Sbjct: 75 EILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKC---DALEIAEVLFS 131
Query: 66 CMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNF 125
+ N + II CR G AL F M N + D + + + A + F
Sbjct: 132 KLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRF 191
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
G+ +H +V K G VFV S+L D+Y K + DA+ VFDEIP++N V NAL+ GY +
Sbjct: 192 GRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQ 251
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
G + + L M ++ + T+S L A + VE G+Q H+ + + +E D
Sbjct: 252 NGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAI--VNGMELDN 309
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
L +SL+ Y K GL++ A+ VF +DVV W ++ Y + G ++ I +
Sbjct: 310 ILGTSLLNFYCKVGLIEYAEMVFD-------RMFEKDVVTWNLIISGYVQQGLVEDAIYM 362
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLC 365
+ M E ++ D + T++SA T + G K + S ++D+
Sbjct: 363 CQLMRLEKLKYDCVTLATLMSAAARTENLKLG-KEVQCYCIRHSFESDIVLASTVMDMYA 421
Query: 366 RAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG 404
+ G + A ++ + T+ K + +W LL A + G
Sbjct: 422 KCGSIVDAKKVFDSTVEKDL-----ILWNTLLAAYAESG 455
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 158/335 (47%), Gaps = 25/335 (7%)
Query: 79 ISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG- 137
+S+ C+ G AL+ + M N+ + L D++ GKQIHA + K G
Sbjct: 42 VSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNGD 101
Query: 138 -WSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELV 196
++ + ++ + LV Y+K +++ A ++F ++ +N A++ GL L
Sbjct: 102 FYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGVKCRIGLCEGALMGF 161
Query: 197 RKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYG 256
+M + D F + +AC L GR +H YV+++ +E VF+ SSL +MYG
Sbjct: 162 VEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS--GLEDCVFVASSLADMYG 219
Query: 257 KCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRP 316
KCG++ A +VF D + RN V W +++ Y +NGK +E I LF +M ++G+ P
Sbjct: 220 KCGVLDDASKVF--DEIPDRN-----AVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEP 272
Query: 317 DGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY----SCLVDLLCRAGELQK 372
+ T +SA + G V G S+ + G E + L++ C+ G ++
Sbjct: 273 TRVTVSTCLSASANMGGVEEG-----KQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEY 327
Query: 373 AWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
A + ++ M + W +++ V G +E
Sbjct: 328 A-----EMVFDRMFEKDVVTWNLIISGYVQQGLVE 357
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 139/498 (27%), Positives = 235/498 (47%), Gaps = 54/498 (10%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTN-LIAAYATCLPKNHLQTLHNFFKC 66
L C L K+LH L +G +N L YA+ Q L +
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIP- 70
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
++ + + + ++S+F R G ++ F M V +D ++ +++ D+ F
Sbjct: 71 LSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK--------------- 171
+Q H K+G +SV V +AL+D+Y K V + +F+E+ EK
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 172 ----------------NTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKY--DQFTLSA 213
N V +++GY AG + LEL+ +M V R + + TL +
Sbjct: 191 EGLERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEM-VFRCGHGLNFVTLCS 249
Query: 214 ALRACTGLSAVELGRQLHSYVLRTTHDI-----ESDVFLQSSLIEMYGKCGLVKKAQQVF 268
L AC + +GR +H Y L+ + DV + ++L++MY KCG + + VF
Sbjct: 250 MLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVF 309
Query: 269 KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC 328
+L R R+VV W ++ +GK + VID+F +M+ E ++PD + F V+SAC
Sbjct: 310 RL-------MRKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSAC 361
Query: 329 GHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNC 388
H+G V G + F S+ + L P +HY+C+VDLL RAG +++A E+L + +
Sbjct: 362 SHSGIVDEGWRCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEA-EILMREMPVPPNEV 419
Query: 389 TISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRV 448
+ G+LL +C G +E+ + + +++ P N IL+SN+Y G D LR
Sbjct: 420 VL---GSLLGSCSVHGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRG 476
Query: 449 VIKERGLRKDVGCSWVQV 466
+++RG+RK G S + V
Sbjct: 477 SLRKRGIRKIPGLSSIYV 494
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 178 bits (451), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 134/453 (29%), Positives = 229/453 (50%), Gaps = 29/453 (6%)
Query: 22 KKLHGNLLRTG---TLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVI 78
K+LH ++++G + F+ ++ L+ Y+ C L F + + + +N I
Sbjct: 233 KQLHSLVVKSGWNISNIFVANV---LVDYYSAC---GDLSGSMRSFNAVPEKDVISWNSI 286
Query: 79 ISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGW 138
+S G +L FS M S L SR +D+ GKQIH +V K+G+
Sbjct: 287 VSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGF 346
Query: 139 S-SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVR 197
SS+ V SAL+D+Y K + ++++AL++ +P N C N+L++ G+ +E+
Sbjct: 347 DVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFG 406
Query: 198 KMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES----DVFLQSSLIE 253
M D+ TLS L+A + + L LHS L I+S DV + SLI+
Sbjct: 407 LMIDEGTGIDEVTLSTVLKALS----LSLPESLHSCTLVHCCAIKSGYAADVAVSCSLID 462
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
Y K G + +++VF D +++ N + TS++ Y RNG + + + +EM
Sbjct: 463 AYTKSGQNEVSRKVF--DELDTPN-----IFCLTSIINGYARNGMGTDCVKMLREMDRMN 515
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
+ PD + L+V+S C H+G V G F+S+ +++ ++PG + Y+C+VDLL RAG ++KA
Sbjct: 516 LIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKA 575
Query: 374 WELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNL 433
LL Q +G +C W +LL +C N +G+ A + + L+P N + I +S
Sbjct: 576 ERLLLQA--RGDADCV--AWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKF 631
Query: 434 YARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
Y G ++ +R + R L +++G S V V
Sbjct: 632 YFEIGDFEISRQIREIAASRELMREIGYSSVVV 664
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 8/286 (2%)
Query: 52 LPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALC 111
+ +L + H F M+ + + +N++IS R G A+ ++ M + +
Sbjct: 57 IKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 112 STLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK 171
S L+ S G Q+H V LG+ ++FV SALV LY+ L V A +FDE+ ++
Sbjct: 117 SVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEMLDR 176
Query: 172 NTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLH 231
N N LL + + G + E+ +M + + + T +R C+ V G+QLH
Sbjct: 177 NLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLH 236
Query: 232 SYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
S V+++ +I S++F+ + L++ Y CG + + + F +DV+ W S++
Sbjct: 237 SLVVKSGWNI-SNIFVANVLVDYYSACGDLSGSMRSFN-------AVPEKDVISWNSIVS 288
Query: 292 VYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
V G + +DLF +M G RP F++ ++ C + +G
Sbjct: 289 VCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSG 334
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 135/289 (46%), Gaps = 16/289 (5%)
Query: 6 IQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTN--LIAAYATCLPKNHLQTLHNF 63
+ FL+ C ++ + K++H +L+ G F + LH LI Y C + L+
Sbjct: 319 MSFLNFCSRNSDIQSGKQIHCYVLKMG--FDVSSLHVQSALIDMYGKCNGIENSALLYQS 376
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV--N 121
C+N N ++++ G + F M +D L + L A S
Sbjct: 377 LPCLNLECC---NSLMTSLMHCGITKDIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPE 433
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
++ +H K G+++ V V +L+D Y+K + + VFDE+ N C ++++
Sbjct: 434 SLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIIN 493
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
GY G+ ++++R+M + L D+ T+ + L C+ VE G + L + + I
Sbjct: 494 GYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGLVEEGELIFDS-LESKYGI 552
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSML 290
L + ++++ G+ GLV+KA+++ +++R + D V W+S+L
Sbjct: 553 SPGRKLYACMVDLLGRAGLVEKAERLL----LQARGD--ADCVAWSSLL 595
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 121/275 (44%), Gaps = 28/275 (10%)
Query: 139 SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRK 198
S V+ + +D K ++ A FDE+ ++ V N L+SG G + +EL +
Sbjct: 43 SDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAE 102
Query: 199 MPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC 258
M L+ T + L C+ G Q+H V+ + ++F++S+L+ +Y
Sbjct: 103 MVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVI--SLGFGCNMFVRSALVGLYACL 160
Query: 259 GLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDG 318
LV A ++F D + RN + + +L + + G+ K + +++ M EG+ +G
Sbjct: 161 RLVDVALKLF--DEMLDRN-----LAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNG 213
Query: 319 IAFLTVISACGHTGQVHAG-------VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQ 371
+ + +I C H V+ G VK ++SN F N ++YS G+L
Sbjct: 214 LTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSA-------CGDLS 266
Query: 372 KAWELLNQTLYKGMGNCTISMWGALLNACVDCGNI 406
+ N K + W ++++ C D G++
Sbjct: 267 GSMRSFNAVPEK-----DVISWNSIVSVCADYGSV 296
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 181/356 (50%), Gaps = 30/356 (8%)
Query: 126 GKQIHAHVGKLGW-SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYG 184
G+ +H V KLG+ S +G+ L+ Y+K ++ A VFDE+PE+ +V NA++ GY
Sbjct: 130 GRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGY- 188
Query: 185 EAGLWAQGLELVRKMPVLRLKYD---------QFTLSAALRACTGLSAVELGRQLHSYVL 235
+G RK VL ++ T+ L A + +E+G +H Y+
Sbjct: 189 -CSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIE 247
Query: 236 RTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGR 295
+ E DVF+ ++L++MY KCG + A VF+L V ++V WTSM
Sbjct: 248 KLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKV-------KNVFTWTSMATGLAL 300
Query: 296 NGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPE 355
NG+ E +L M E GI+P+ I F +++SA H G V G++ F+SM F + P E
Sbjct: 301 NGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIE 360
Query: 356 HYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQR 415
HY C+VDLL +AG +Q+A++ + K + +L NAC G +G+ G+
Sbjct: 361 HYGCIVDLLGKAGRIQEAYQFILAMPIKP----DAILLRSLCNACSIYGETVMGEEIGKA 416
Query: 416 ALELDPHNAGIC-------ILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWV 464
LE++ + + + LSN+ A G W E+ LR +KER ++ G S+V
Sbjct: 417 LLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 116/255 (45%), Gaps = 19/255 (7%)
Query: 24 LHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFC 83
+HG + + G L+ + T L+ YA L+ F M + +N +I +C
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAK---NGDLRYARKVFDEMPERTSVTWNAMIGGYC 189
Query: 84 ----------RKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHV 133
RK + FS + P DT +C L+A S+ + G +H ++
Sbjct: 190 SHKDKGNHNARKAM--VLFRRFSCCGSGVRPTDTTMVC-VLSAISQTGLLEIGSLVHGYI 246
Query: 134 GKLGWSSS--VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQ 191
KLG++ VF+G+ALVD+YSK + +A VF+ + KN ++ +G G +
Sbjct: 247 EKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNE 306
Query: 192 GLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSL 251
L+ +M +K ++ T ++ L A + VE G +L ++T + + +
Sbjct: 307 TPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFK-SMKTRFGVTPVIEHYGCI 365
Query: 252 IEMYGKCGLVKKAQQ 266
+++ GK G +++A Q
Sbjct: 366 VDLLGKAGRIQEAYQ 380
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/407 (28%), Positives = 207/407 (50%), Gaps = 21/407 (5%)
Query: 64 FKCMNSTNPL-HFNVIISNFCRKGFPFLALTAFSFM-HTNNVPLDTYALCSTLTASSRVN 121
+ M+ T L +N +IS G +L AF M + D L T++AS +
Sbjct: 536 LETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLLGTISASGNLG 595
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
V G+ H K + + L+ +Y + ++ A VF I + N N ++S
Sbjct: 596 LVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDPNLCSWNCVIS 655
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
+ + +L R L+L+ ++ T L A T L + G Q H +++R
Sbjct: 656 ALSQNKAGREVFQLFRN---LKLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIR--RGF 710
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
+++ F+ ++L++MY CG+++ +VF+ GV S + W S++ +G +G ++
Sbjct: 711 QANPFVSAALVDMYSSCGMLETGMKVFRNSGVNS-------ISAWNSVISAHGFHGMGEK 763
Query: 302 VIDLFKEMLEEG-IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL 360
++LFKE+ + P+ +F++++SAC H+G + G+ Y++ M +F + P EH +
Sbjct: 764 AMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWI 823
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTIS-MWGALLNACVDCGNIELGKLAGQRALEL 419
VD+L RAG+L++A+E + G+G + +WGALL+AC G+ +LGK + E+
Sbjct: 824 VDMLGRAGKLREAYEFIT-----GIGEPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEM 878
Query: 420 DPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+P NA I L+N Y G W+E LR ++++ L+K G S + V
Sbjct: 879 EPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDV 925
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 137/261 (52%), Gaps = 13/261 (4%)
Query: 56 HLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLT 115
+L + F M + + +N I++ G P +L F M + DT ++
Sbjct: 238 NLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVIS 297
Query: 116 ASSRVNDVNFGKQIHAHVGKLGWS--SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNT 173
A S + ++ G+ +H V K G+S + V VG++++ +YSK + A VF+E+ ++
Sbjct: 298 ACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDV 357
Query: 174 VCANALLSGYGEAGLWAQGLELVRKM-PVLRLKYDQFTLSAALRACTGLSAVELGRQLHS 232
+ +NA+L+G+ G++ + ++ +M V +++ D T+ + C LS GR +H
Sbjct: 358 ISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSFSREGRAVHG 417
Query: 233 YVLRTTHDIESDVF-LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
Y +R +++S + +S+I+MYGKCGL +A+ +FK RD+V W SM+
Sbjct: 418 YTVRM--EMQSRALEVINSVIDMYGKCGLTTQAELLFK-------TTTHRDLVSWNSMIS 468
Query: 292 VYGRNGKYKEVIDLFKEMLEE 312
+ +NG + +LFKE++ E
Sbjct: 469 AFSQNGFTHKAKNLFKEVVSE 489
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 92/184 (50%), Gaps = 8/184 (4%)
Query: 147 ALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKY 206
AL++LY+K ++ A VF + ++ V N +++ G + L+ + M +
Sbjct: 228 ALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYFKSMTGSGQEA 287
Query: 207 DQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQ 266
D T S + AC+ + + LG LH V+++ + E+ V + +S+I MY KCG + A+
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAET 347
Query: 267 VFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLE-EGIRPDGIAFLTVI 325
VF+ RDV+ ++L + NG ++E + +M + I+PD +++
Sbjct: 348 VFE-------ELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSIT 400
Query: 326 SACG 329
S CG
Sbjct: 401 SICG 404
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/384 (22%), Positives = 167/384 (43%), Gaps = 48/384 (12%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
+ +HG +R ++ ++I Y C + L FK + + +N +IS
Sbjct: 413 RAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELL---FKTTTHRDLVSWNSMISA 469
Query: 82 FCRKGFPFLALTAF----SFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG 137
F + GF A F S + L T + + LT+ + + FGK +H + KLG
Sbjct: 470 FSQNGFTHKAKNLFKEVVSEYSCSKFSLST--VLAILTSCDSSDSLIFGKSVHCWLQKLG 527
Query: 138 WSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVR 197
+S F+ +L ++ + ++ N+++SG +G + L +
Sbjct: 528 DLTSAFL---------RLETMSET---------RDLTSWNSVISGCASSGHHLESLRAFQ 569
Query: 198 KMPVL-RLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYG 256
M ++++D TL + A L V GR H +++ ++ D LQ++LI MYG
Sbjct: 570 AMSREGKIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLREL--DTQLQNTLITMYG 627
Query: 257 KCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRP 316
+C ++ A +VF L ++ W ++ +N +EV LF+ + + P
Sbjct: 628 RCKDIESAVKVFGLIS-------DPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEP 677
Query: 317 DGIAFLTVISACGHTGQVHAGVK-YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWE 375
+ I F+ ++SA G G++ + + F+ NP + LVD+ G L+ +
Sbjct: 678 NEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVS--AALVDMYSSCGMLETGMK 735
Query: 376 LLNQTLYKGMGNCTISMWGALLNA 399
+++ G +IS W ++++A
Sbjct: 736 -----VFRNSGVNSISAWNSVISA 754
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 92/211 (43%), Gaps = 9/211 (4%)
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
+ +H K G + S L+ Y + + ++ +FDE+ EK+ + N++++ +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMITALNQN 166
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
G + + L +M ++D TL A A + L LH + T + D
Sbjct: 167 GRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIET--GLVGDSS 224
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
L ++L+ +Y K + A+ VF + RD+V W +++ NG ++ + F
Sbjct: 225 LCNALMNLYAKGENLSSAECVFT-------HMEHRDIVSWNTIMTKCLANGHPRKSLQYF 277
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
K M G D + F VISAC ++ G
Sbjct: 278 KSMTGSGQEADTVTFSCVISACSSIEELTLG 308
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 127/465 (27%), Positives = 223/465 (47%), Gaps = 22/465 (4%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHT--NLIAAYATCLPKNHLQTLH 61
++ L C V +++ + +HG +R G F L D+ +LI Y+ + +
Sbjct: 228 TVTSVLKACTVMEDIDVGRSVHGFSIRRG--FDLADVFVCNSLIDMYSKGF---DVDSAF 282
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
F N + +N I++ F AL F M V +D + S L
Sbjct: 283 RVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFE 342
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
K IH + + G+ S+ S+L+D Y+ S V DA V D + K+ V + ++S
Sbjct: 343 QPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMIS 402
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
G AG + + + M R + T+ + L AC+ + + + H +R + I
Sbjct: 403 GLAHAGRSDEAISIFCHM---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAI 459
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
+D+ + +S+++ Y KCG ++ A++ F D + +N ++ WT ++ Y NG +
Sbjct: 460 -NDISVGTSIVDAYAKCGAIEMARRTF--DQITEKN-----IISWTVIISAYAINGLPDK 511
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
+ LF EM ++G P+ + +L +SAC H G V G+ F+SM E P +HYSC+V
Sbjct: 512 ALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVEE-DHKPSLQHYSCIV 570
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVD-CGNIELGKLAGQRALELD 420
D+L RAGE+ A EL+ + L + + S WGA+L+ C + + + LEL+
Sbjct: 571 DMLSRAGEIDTAVELI-KNLPEDV-KAGASAWGAILSGCRNRFKKLIITSEVVAEVLELE 628
Query: 421 PHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
P + +L S+ +A W+++ +R ++KER +R G S V+
Sbjct: 629 PLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVR 673
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 191/414 (46%), Gaps = 60/414 (14%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F CMNS + + +NVI+ GF L FS + +T L + A +
Sbjct: 84 FDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHA---CRSL 140
Query: 124 NF-GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
F G++IH +V + G+ V ++++ +Y+ S+ A +FDE+ E++ + + ++
Sbjct: 141 WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRS 199
Query: 183 YGEAGLWAQGLELVRKMP-VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
Y ++ GL+L ++M + + D T+++ L+ACT + +++GR +H + +R D+
Sbjct: 200 YVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDL 259
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
+DVF+ +SLI+MY K V A +VF R++V W S+L + N +Y E
Sbjct: 260 -ADVFVCNSLIDMYSKGFDVDSAFRVFD-------ETTCRNIVSWNSILAGFVHNQRYDE 311
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQ------VHAGVKYFESMSNEFKLNPGPE 355
+++F M++E + D + ++++ C Q +H + SNE L
Sbjct: 312 ALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVAL----- 366
Query: 356 HYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWG--------------------- 394
S L+D + A +L+ YK + +C+ + G
Sbjct: 367 --SSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDTP 424
Query: 395 ------ALLNACVDCGNIELGK----LAGQRALELDPHNAGICILLSNLYARFG 438
+LLNAC ++ K +A +R+L ++ + G I+ + YA+ G
Sbjct: 425 NAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIV--DAYAKCG 476
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 137/293 (46%), Gaps = 27/293 (9%)
Query: 134 GKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGL 193
KL W +F G+++ D Y K + FD + +++V N ++ G + G +GL
Sbjct: 56 AKLSW---LFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGL 112
Query: 194 ELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIE 253
K+ V + + TL + AC L G ++H YV+R+ S V Q+S++
Sbjct: 113 WWFSKLRVWGFEPNTSTLVLVIHACRSLWFD--GEKIHGYVIRSGFCGISSV--QNSILC 168
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERS-RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEE 312
MY + A+++F +E S RDV+ W+ ++ Y ++ + + LFKEM+ E
Sbjct: 169 MYADSDSL-SARKLF--------DEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHE 219
Query: 313 G-IRPDGIAFLTVISACGHTGQVHAG--VKYFESMSNEFKLNPGPEHYSC--LVDLLCRA 367
PD + +V+ AC + G V F S+ F L + + C L+D+ +
Sbjct: 220 AKTEPDCVTVTSVLKACTVMEDIDVGRSVHGF-SIRRGFDL---ADVFVCNSLIDMYSKG 275
Query: 368 GELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELD 420
++ A+ + ++T + + + + G + N D +E+ L Q A+E+D
Sbjct: 276 FDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYD-EALEMFHLMVQEAVEVD 327
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 119/390 (30%), Positives = 201/390 (51%), Gaps = 14/390 (3%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+NV+I + GF + F+ M + Y + + + + + +HA
Sbjct: 175 WNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCL 234
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
K+ S +VG ALV++YS+ + A VF+ I E + V ++L++GY G + L
Sbjct: 235 KINLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALH 294
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
L ++ + K D ++ L +C LS G+++HSYV+R +E D+ + S+LI+M
Sbjct: 295 LFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRL--GLELDIKVCSALIDM 352
Query: 255 YGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGI 314
Y KCGL+K A +F G+ +N +V + S++ G +G + F E+LE G+
Sbjct: 353 YSKCGLLKCAMSLFA--GIPEKN-----IVSFNSLILGLGLHGFASTAFEKFTEILEMGL 405
Query: 315 RPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAW 374
PD I F ++ C H+G ++ G + FE M +EF + P EHY +V L+ AG+L++A+
Sbjct: 406 IPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAF 465
Query: 375 ELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGIC-ILLSNL 433
E + +L K + + + GALL+ C N L ++ + + + ++LSN+
Sbjct: 466 EFV-MSLQKPIDS---GILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNV 521
Query: 434 YARFGMWDEIGHLRVVIKERGLRKDVGCSW 463
YAR+G WDE+ LR I E K G SW
Sbjct: 522 YARYGRWDEVERLRDGISESYGGKLPGISW 551
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 138/325 (42%), Gaps = 14/325 (4%)
Query: 55 NHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTL 114
+ L + F + +N II + + L+ FS + ++ D +
Sbjct: 54 DDLISARKLFDVFPERSVFLWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLA 113
Query: 115 TASSRVNDVNFGKQIH--AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKN 172
S D + IH A V LG+ GSA+V YSK + +A+ +F IP+ +
Sbjct: 114 RGFSESFDTKGLRCIHGIAIVSGLGFDQ--ICGSAIVKAYSKAGLIVEASKLFCSIPDPD 171
Query: 173 TVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHS 232
N ++ GYG G W +G+ L M + + +T+ A S + + +H+
Sbjct: 172 LALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTSGLIDPSLLLVAWSVHA 231
Query: 233 YVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGV 292
+ L+ +++S ++ +L+ MY +C + A VF + D+V +S++
Sbjct: 232 FCLKI--NLDSHSYVGCALVNMYSRCMCIASACSVFN-------SISEPDLVACSSLITG 282
Query: 293 YGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNP 352
Y R G +KE + LF E+ G +PD + V+ +C +G K S L
Sbjct: 283 YSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSG-KEVHSYVIRLGLEL 341
Query: 353 GPEHYSCLVDLLCRAGELQKAWELL 377
+ S L+D+ + G L+ A L
Sbjct: 342 DIKVCSALIDMYSKCGLLKCAMSLF 366
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 108/221 (48%), Gaps = 4/221 (1%)
Query: 44 LIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNV 103
L+ Y+ C+ + + + F ++ + + + +I+ + R G AL F+ + +
Sbjct: 248 LVNMYSRCMC---IASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMSGK 304
Query: 104 PLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAAL 163
D + L + + ++D GK++H++V +LG + V SAL+D+YSK +K A
Sbjct: 305 KPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMS 364
Query: 164 VFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSA 223
+F IPEKN V N+L+ G G G + E ++ + L D+ T SA L C
Sbjct: 365 LFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGL 424
Query: 224 VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKA 264
+ G+++ +++ IE ++++ G G +++A
Sbjct: 425 LNKGQEIFER-MKSEFGIEPQTEHYVYMVKLMGMAGKLEEA 464
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 87/200 (43%), Gaps = 9/200 (4%)
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
+++H+ V K + + + L Y+ + A +FD PE++ N+++ Y +A
Sbjct: 25 QKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIRAYAKA 84
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
+ L L ++ + D FT + R + + R +H + + D
Sbjct: 85 HQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAI--VSGLGFDQI 142
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
S++++ Y K GL+ +A ++F + D+ LW M+ YG G + + I+LF
Sbjct: 143 CGSAIVKAYSKAGLIVEASKLFC-------SIPDPDLALWNVMILGYGCCGFWDKGINLF 195
Query: 307 KEMLEEGIRPDGIAFLTVIS 326
M G +P+ + + S
Sbjct: 196 NLMQHRGHQPNCYTMVALTS 215
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 177/336 (52%), Gaps = 22/336 (6%)
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
K+ W+S ++D Y + V A +F ++ +K+ V ++SG + L+A+
Sbjct: 400 KVSWTS-------MIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAAS 452
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
L+ M LK T S L + S ++ G+ +H + +TT + D+ LQ+SL+ M
Sbjct: 453 LLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSM 512
Query: 255 YGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGI 314
Y KCG ++ A ++F +D V W SM+ +G + ++LFKEML+ G
Sbjct: 513 YAKCGAIEDAYEIFA-------KMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGK 565
Query: 315 RPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAW 374
+P+ + FL V+SAC H+G + G++ F++M + + PG +HY ++DLL RAG+L++A
Sbjct: 566 KPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAE 625
Query: 375 ELLNQTLYKGMGNCTISMWGALLNAC----VDCGNIELGKLAGQRALELDPHNAGICILL 430
E ++ + +++GALL C D + + A R LELDP NA + L
Sbjct: 626 EFISALPF----TPDHTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVAL 681
Query: 431 SNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
N+YA G D +R + +G++K GCSWV V
Sbjct: 682 CNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVV 717
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 125/295 (42%), Gaps = 44/295 (14%)
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F M N + +N +++ R G A F M + +V + A+ + + +
Sbjct: 160 LFDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDV-VSWNAMIKGYIENDGMEE 218
Query: 123 VN--FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALL 180
FG +V + W+S V+ Y + V++A +F E+PE+N V A++
Sbjct: 219 AKLLFGDMSEKNV--VTWTSMVYG-------YCRYGDVREAYRLFCEMPERNIVSWTAMI 269
Query: 181 SGYGEAGLWAQGLELVRKMP--VLRLKYDQFTLSAALRACTGLSAV--ELGRQLHSYVLR 236
SG+ L+ + L L +M V + + TL + AC GL LG QLH+ V+
Sbjct: 270 SGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVIS 329
Query: 237 TTHD-IESDVFLQSSLIEMYGKCGLVKKAQQVFK--------------------LDGVES 275
+ ++ D L SL+ MY GL+ AQ + L+ E+
Sbjct: 330 NGWETVDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAET 389
Query: 276 RNERSR---DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISA 327
ER + D V WTSM+ Y G LF+++ ++ DG+ + +IS
Sbjct: 390 LFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK----DGVTWTVMISG 440
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 103/224 (45%), Gaps = 27/224 (12%)
Query: 126 GKQIHAH-----VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALL 180
G +HA + + G + V ++L+ Y+K + +A ++F+ +PE+N V NA+L
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAML 115
Query: 181 SGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD 240
+GY + + L R+MP + + L+A AVEL ++
Sbjct: 116 TGYVKCRRMNEAWTLFREMPKNVVSW-TVMLTALCDDGRSEDAVELFDEMP--------- 165
Query: 241 IESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
E +V ++L+ + G ++KA+QVF D + SRDVV W +M+ Y N +
Sbjct: 166 -ERNVVSWNTLVTGLIRNGDMEKAKQVF--DAMP-----SRDVVSWNAMIKGYIENDGME 217
Query: 301 EVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
E LF +M E+ + + + +++ G V + F M
Sbjct: 218 EAKLLFGDMSEKNV----VTWTSMVYGYCRYGDVREAYRLFCEM 257
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 213/431 (49%), Gaps = 42/431 (9%)
Query: 57 LQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTA 116
++ F + + + + +I RK AL ++ M + + L+A
Sbjct: 255 IEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSA 314
Query: 117 SSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYS-----KLS------SVKD----- 160
S+R + G Q+H + K G+ F+ + ++ Y+ KL+ SVKD
Sbjct: 315 SARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASR 374
Query: 161 ---------------AALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM-PVLRL 204
A VFD+ +K+ NA++SGY ++ L L R+M ++
Sbjct: 375 NALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQV 434
Query: 205 KYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKA 264
K D T+ + A + L ++E G++ H Y+ +T I + L +++I+MY KCG ++ A
Sbjct: 435 KPDAITMVSVFSAISSLGSLEEGKRAHDYLNFST--IPPNDNLTAAIIDMYAKCGSIETA 492
Query: 265 QQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTV 324
+F +++N S + W +++ +G K +DL+ ++ I+P+ I F+ V
Sbjct: 493 LNIFH----QTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGV 548
Query: 325 ISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKG 384
+SAC H G V G YFESM ++ + P +HY C+VDLL +AG L++A E++ + K
Sbjct: 549 LSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIKKMPVKA 608
Query: 385 MGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIG 444
+ +WG LL+A GN+E+ +LA +DP + G ++LSN+YA G W+++
Sbjct: 609 ----DVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWEDVA 664
Query: 445 HLRVVIKERGL 455
+R ++ R +
Sbjct: 665 LVREEMRTRDV 675
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 170/403 (42%), Gaps = 61/403 (15%)
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F M + + + +I + + A+ F M + L+ L + ++A S +
Sbjct: 129 LFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGG 188
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ + + + KL VFV + L+ +Y +KDA +FDE+PE+N V N +L+G
Sbjct: 189 IWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNG 248
Query: 183 YGEAGLWAQGLELVRKM-----------------------------PVLR--LKYDQFTL 211
Y +AGL Q EL ++ +LR +K + +
Sbjct: 249 YSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 212 SAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKL- 270
L A G QLH +++ D FLQ+++I Y +K A Q F+
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYD--FLQATIIHFYAVSNDIKLALQQFEAS 366
Query: 271 --DGVESRN------------ERSR---------DVVLWTSMLGVYGRNGKYKEVIDLFK 307
D + SRN E++R D+ W +M+ Y ++ + + LF+
Sbjct: 367 VKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFR 426
Query: 308 EMLEEG-IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
EM+ ++PD I ++V SA G + G + + + N + P + ++D+ +
Sbjct: 427 EMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYL-NFSTIPPNDNLTAAIIDMYAK 485
Query: 367 AGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELG 409
G ++ A + +QT K + + TIS W A++ G+ +L
Sbjct: 486 CGSIETALNIFHQT--KNISSSTISPWNAIICGSATHGHAKLA 526
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 128/267 (47%), Gaps = 44/267 (16%)
Query: 109 ALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVF--- 165
AL S L + + NDV G+QIH V K G S+ ++ ++++++Y+K + DA VF
Sbjct: 43 ALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDH 102
Query: 166 ----------------------------DEIPEKNTVCANALLSGYGEAGLWAQGLELVR 197
D +PE++ V L+ GY + W++ +EL R
Sbjct: 103 AKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFR 162
Query: 198 KMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGK 257
+M L + ++ TL+ + AC+ L + R L S ++ +E VF+ ++L+ MY
Sbjct: 163 EMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLK--LEGRVFVSTNLLHMYCL 220
Query: 258 CGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPD 317
C +K A+++F D + RN +V W ML Y + G ++ +LF ++ E+ I
Sbjct: 221 CLCLKDARKLF--DEMPERN-----LVTWNVMLNGYSKAGLIEQAEELFDQITEKDI--- 270
Query: 318 GIAFLTVISACGHTGQVHAGVKYFESM 344
+++ T+I C Q+ + Y+ M
Sbjct: 271 -VSWGTMIDGCLRKNQLDEALVYYTEM 296
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/340 (30%), Positives = 183/340 (53%), Gaps = 17/340 (5%)
Query: 126 GKQIHAHVGKL--GWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
G+ +HAHV K + FV +ALV Y+ +++A +F+ I E + N LL+ Y
Sbjct: 132 GRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAY 191
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+ E++ ++++ ++ +L A +++C L G H YVL+ +++
Sbjct: 192 ANSEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLK--NNLTL 249
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS-RDVVLWTSMLGVYGRNGKYKEV 302
+ F+ +SLI++Y KCG + A++VF +E S RDV + +M+ +G +E
Sbjct: 250 NQFVGTSLIDLYSKCGCLSFARKVF--------DEMSQRDVSCYNAMIRGLAVHGFGQEG 301
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVD 362
I+L+K ++ +G+ PD F+ ISAC H+G V G++ F SM + + P EHY CLVD
Sbjct: 302 IELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVD 361
Query: 363 LLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPH 422
LL R+G L++A E + + K ++W + L + G+ E G++A + L L+
Sbjct: 362 LLGRSGRLEEAEECIKKMPVKP----NATLWRSFLGSSQTHGDFERGEIALKHLLGLEFE 417
Query: 423 NAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCS 462
N+G +LLSN+YA W ++ R ++K+ + K G S
Sbjct: 418 NSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 135/516 (26%), Positives = 237/516 (45%), Gaps = 87/516 (16%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
+ LH +L+ +G + L + L+ Y C + F M + V+I
Sbjct: 36 RVLHAHLVTSG-IARLTRIAAKLVTFYVEC---GKVLDARKVFDEMPKRDISGCVVMIGA 91
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
R G+ +L F M+ + + LD + + S L AS + D FGK IH V K + S
Sbjct: 92 CARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESD 151
Query: 142 VFVGS-------------------------------ALVDLYSKLSSVKDAALVFDEIP- 169
F+ S A++ Y+ S +A + ++
Sbjct: 152 AFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKL 211
Query: 170 ---EKNTVCANALLSGYGE------------------------------AGLW-----AQ 191
+ + + NAL+SG+ +GL +
Sbjct: 212 LGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEK 271
Query: 192 GLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSL 251
+ ++M L + T+ L ACT L+ ++ G+++H Y + T +E F++S+L
Sbjct: 272 AFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVT--GLEDHGFVRSAL 329
Query: 252 IEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLE 311
++MYGKCG + +A +F R + V + SM+ Y +G + ++LF +M
Sbjct: 330 LDMYGKCGFISEAMILF-------RKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEA 382
Query: 312 EGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQ 371
G + D + F +++AC H G G F M N++++ P EHY+C+VDLL RAG+L
Sbjct: 383 TGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLV 442
Query: 372 KAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLS 431
+A+E++ + + +WGALL AC + GN+EL ++A + EL+P N+G +LL+
Sbjct: 443 EAYEMIKAMRMEP----DLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLT 498
Query: 432 NLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQVT 467
+LYA G W+ + ++ +IK++ R+ +G SWV+
Sbjct: 499 SLYANAGSWESVVRMKKMIKKKRFRRFLGSSWVETV 534
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 139/285 (48%), Gaps = 11/285 (3%)
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGE 185
G+ +HAH+ G + + + LV Y + V DA VFDE+P+++ ++
Sbjct: 35 GRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACAR 94
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
G + + L+ R+M LK D F + + L+A L E G+ +H VL+ ++ ESD
Sbjct: 95 NGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSY--ESDA 152
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
F+ SSLI+MY K G V A++VF G +D+V++ +M+ Y N + E ++L
Sbjct: 153 FIVSSLIDMYSKFGEVGNARKVFSDLG-------EQDLVVFNAMISGYANNSQADEALNL 205
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLC 365
K+M GI+PD I + +IS H + E M + P ++ ++ L
Sbjct: 206 VKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLD-GYKPDVVSWTSIISGLV 264
Query: 366 RAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGK 410
+ +KA++ Q L G+ + ++ LL AC ++ GK
Sbjct: 265 HNFQNEKAFDAFKQMLTHGLYPNSATII-TLLPACTTLAYMKHGK 308
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 194/405 (47%), Gaps = 14/405 (3%)
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
FK M N + + +I + AL F M + + +TA +
Sbjct: 181 LFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPA 240
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
+ G Q+H + KLG+ +V ++L+ Y+ + D+ VFDE + ALLSG
Sbjct: 241 FHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSG 300
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
Y L + M + +Q T ++ L +C+ L ++ G+++H ++ +E
Sbjct: 301 YSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL--GLE 358
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEV 302
+D F+ +SL+ MY G V A VF + +V W S++ ++G+ K
Sbjct: 359 TDAFVGNSLVVMYSDSGNVNDAVSVFI-------KIFKKSIVSWNSIIVGCAQHGRGKWA 411
Query: 303 IDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFK-LNPGPEHYSCLV 361
+F +M+ PD I F ++SAC H G + G K F MS+ ++ +HY+C+V
Sbjct: 412 FVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMV 471
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDP 421
D+L R G+L++A EL+ + + K +W ALL+AC +++ G+ A LD
Sbjct: 472 DILGRCGKLKEAEELIERMVVKP----NEMVWLALLSACRMHSDVDRGEKAAAAIFNLDS 527
Query: 422 HNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
++ +LLSN+YA G W + LRV +K+ G+ K G SWV +
Sbjct: 528 KSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVI 572
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 123/247 (49%), Gaps = 4/247 (1%)
Query: 23 KLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNF 82
++HG +++ G L+ + + +LI YA C + F + ++S +
Sbjct: 246 QVHGLIIKLGFLYEEY-VSASLITFYANC---KRIGDSRKVFDEKVHEQVAVWTALLSGY 301
Query: 83 CRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSV 142
AL+ FS M N++ + S L + S + +++GK++H KLG +
Sbjct: 302 SLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDA 361
Query: 143 FVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVL 202
FVG++LV +YS +V DA VF +I +K+ V N+++ G + G + +M L
Sbjct: 362 FVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRL 421
Query: 203 RLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVK 262
+ D+ T + L AC+ +E GR+L Y+ + I+ + + ++++ G+CG +K
Sbjct: 422 NKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLK 481
Query: 263 KAQQVFK 269
+A+++ +
Sbjct: 482 EAEELIE 488
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 151/368 (41%), Gaps = 32/368 (8%)
Query: 40 LHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMH 99
L+T +I Y N L N F M + + +N +IS G A+ F M
Sbjct: 68 LYTKMITGYTR---SNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 100 TNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHV---GKLGWSSSVFVGSALVDLYSKLS 156
+V + + + R V+ +++ + W+S +V Y +
Sbjct: 125 ERSV----VSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNS-------MVHGYLQFG 173
Query: 157 SVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALR 216
V DA +F ++P KN + ++ G + + L+L + M +K + +
Sbjct: 174 KVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVIT 233
Query: 217 ACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESR 276
AC A +G Q+H +++ E ++ +SLI Y C + +++VF E
Sbjct: 234 ACANAPAFHMGIQVHGLIIKLGFLYEE--YVSASLITFYANCKRIGDSRKVFD----EKV 287
Query: 277 NERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHA 336
+E+ V +WT++L Y N K+++ + +F ML I P+ F + +++C G +
Sbjct: 288 HEQ---VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDW 344
Query: 337 GVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGAL 396
G K ++ + L + LV + +G + A + + K +I W ++
Sbjct: 345 G-KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKK-----SIVSWNSI 398
Query: 397 LNACVDCG 404
+ C G
Sbjct: 399 IVGCAQHG 406
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 139 SSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRK 198
S V + + ++ Y++ + + DA +FDE+P ++ V N+++SG E G ++L +
Sbjct: 63 SPHVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDE 122
Query: 199 MPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKC 258
MP + + +A + C V+ +L Y + D +S++ Y +
Sbjct: 123 MP----ERSVVSWTAMVNGCFRSGKVDQAERLF-YQMPV-----KDTAAWNSMVHGYLQF 172
Query: 259 GLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDG 318
G V A ++FK ++V+ WT+M+ +N + E +DLFK ML I+
Sbjct: 173 GKVDDALKLFK-------QMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTS 225
Query: 319 IAFLTVISACGHTGQVHAGVK 339
F VI+AC + H G++
Sbjct: 226 RPFTCVITACANAPAFHMGIQ 246
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 219/471 (46%), Gaps = 44/471 (9%)
Query: 23 KLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNF 82
++HG L +TG L L LI Y C L F M + + +N +I +
Sbjct: 142 QIHGFLKKTGLWSDLF-LQNCLIGLYLKC---GCLGLSRQMFDRMPKRDSVSYNSMIDGY 197
Query: 83 CRKGFPFLALTAFSFMHTN-------NVPLDTYA-------LCSTLTASSRVND-VNFGK 127
+ G A F M N + YA + S L A D +++
Sbjct: 198 VKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNS 257
Query: 128 QIHAHV--GKLGWSSSVF---------VGSALVDLYSKLSSVKDAALVFDEIPEKNTVCA 176
I +V G++ + +F + ++D Y+KL V A +FD++P ++ V
Sbjct: 258 MIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAY 317
Query: 177 NALLSGYGEAGLWAQGLELVRKMPV-LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVL 235
N++++GY + + LE+ M L D TL L A L + +H Y++
Sbjct: 318 NSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIV 377
Query: 236 RTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGR 295
+ L +LI+MY KCG ++ A VF +G+E+++ + W +M+G
Sbjct: 378 EKQFYLGGK--LGVALIDMYSKCGSIQHAMLVF--EGIENKS-----IDHWNAMIGGLAI 428
Query: 296 NGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPE 355
+G + D+ ++ ++PD I F+ V++AC H+G V G+ FE M + K+ P +
Sbjct: 429 HGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQ 488
Query: 356 HYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQR 415
HY C+VD+L R+G ++ A L+ + + N I W L AC E G+L +
Sbjct: 489 HYGCMVDILSRSGSIELAKNLIEEMPVE--PNDVI--WRTFLTACSHHKEFETGELVAKH 544
Query: 416 ALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+ +N +LLSN+YA FGMW ++ +R ++KER + K GCSW+++
Sbjct: 545 LILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIEL 595
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/431 (24%), Positives = 188/431 (43%), Gaps = 49/431 (11%)
Query: 1 MSNSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATC----LPKNH 56
M SI +H K + ++HG L++TG + +L T ++ A+A+ L
Sbjct: 8 MECSISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKN-SNLTTRIVLAFASSRRPYLADFA 66
Query: 57 LQTLHNFFKCMNS----TNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCS 112
H + C S +P +N +I + P AL M N V +D ++L
Sbjct: 67 RCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSL 126
Query: 113 TLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKN 172
L A SR+ V G QIH + K G S +F+ + L+ LY K + + +FD +P+++
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 173 TVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHS 232
+V N+++ GY + GL EL MP+ + L + +G + G + S
Sbjct: 187 SVSYNSMIDGYVKCGLIVSARELFDLMPM-----EMKNLISWNSMISGYAQTSDGVDIAS 241
Query: 233 YVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFK-------------LDGVES---- 275
+ E D+ +S+I+ Y K G ++ A+ +F +DG
Sbjct: 242 KLFADMP--EKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFV 299
Query: 276 -------RNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG-IRPDGIAFLTVISA 327
RDVV + SM+ Y +N + E +++F +M +E + PD + V+ A
Sbjct: 300 HHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPA 359
Query: 328 CGHTGQVHAGVK-YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMG 386
G++ + + + +F L G + L+D+ + G +Q A +++G+
Sbjct: 360 IAQLGRLSKAIDMHLYIVEKQFYL--GGKLGVALIDMYSKCGSIQHA-----MLVFEGIE 412
Query: 387 NCTISMWGALL 397
N +I W A++
Sbjct: 413 NKSIDHWNAMI 423
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 123/430 (28%), Positives = 203/430 (47%), Gaps = 25/430 (5%)
Query: 42 TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN 101
T +I AY + + + F + N + +N +++ FCR G AL F+ M
Sbjct: 355 TEMITAYMSF---GMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQR 411
Query: 102 NVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
V L ++L S + A V++ +QIH K G + + + +AL+D+ ++ + DA
Sbjct: 412 GVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADA 471
Query: 162 ALVFDEIPE--KNTVCANALLSGYGEAGLWAQGLELV-RKMPVLRLKYDQFTLSAALRAC 218
+FD+ P ++ +++ GY GL + + L R + +L D+ +L+ L C
Sbjct: 472 EEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVC 531
Query: 219 TGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNE 278
L E+G Q+H Y L+ + SD+ L +SLI MY KC A ++F
Sbjct: 532 GTLGFREMGYQIHCYALKAGY--FSDISLGNSLISMYAKCCDSDDAIKIFN-------TM 582
Query: 279 RSRDVVLWTSMLGVY--GRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHT--GQV 334
R DV+ W S++ Y RNG E + L+ M E+ I+PD I VISA +T ++
Sbjct: 583 REHDVISWNSLISCYILQRNG--DEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKL 640
Query: 335 HAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWG 394
+ F SM + + P EHY+ V +L G L++A + +N + +S+
Sbjct: 641 SSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQP----EVSVLR 696
Query: 395 ALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERG 454
ALL++C N + K + L P IL SN+Y+ G W +R ++ERG
Sbjct: 697 ALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERG 756
Query: 455 LRKDVGCSWV 464
RK SW+
Sbjct: 757 YRKHPAKSWI 766
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 155/350 (44%), Gaps = 43/350 (12%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNN-VPLDTYALCSTLTASSRVND 122
F ++S + + +IS F R AL F M V + Y + LTA RV+
Sbjct: 137 FVSLSSPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSR 196
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKL--SSVKDAALVFDEIPEKNTVCANALL 180
+ G QIH + K G+ +SVFV ++L+ LY K SS D +FDEIP+++ N ++
Sbjct: 197 FSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVV 256
Query: 181 SGYGEAGLWAQGLELVRKM-PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTH 239
S + G + +L +M V D FTLS L +CT S + GR+LH +R
Sbjct: 257 SSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRI-- 314
Query: 240 DIESDVFLQSSLIEMYGKCGLVKKAQQVFKL----DGVESR------------------- 276
+ ++ + ++LI Y K +KK + ++++ D V
Sbjct: 315 GLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIF 374
Query: 277 -NERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTG--- 332
N ++ + + +++ + RNG + + LF +ML+ G+ + + + ACG
Sbjct: 375 ANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKK 434
Query: 333 ---QVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQ 379
Q+H F + N P + L+D+ R + A E+ +Q
Sbjct: 435 VSEQIHGFCIKFGTAFN-------PCIQTALLDMCTRCERMADAEEMFDQ 477
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 105/218 (48%), Gaps = 12/218 (5%)
Query: 114 LTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNT 173
L S++ +DV K +HA KL +G+AL+ Y KL ++A LVF +
Sbjct: 87 LRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTV 145
Query: 174 VCANALLSGYGEAGLWAQGLELVRKMPVLRL-KYDQFTLSAALRACTGLSAVELGRQLHS 232
V AL+SG+ L + L++ +M L + +++T A L AC +S LG Q+H
Sbjct: 146 VSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHG 205
Query: 233 YVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKL-DGVESRNERSRDVVLWTSMLG 291
++++ + VF+ +SL+ +Y K V KL D + RDV W +++
Sbjct: 206 LIVKS--GFLNSVFVSNSLMSLYDKDS-GSSCDDVLKLFDEIP-----QRDVASWNTVVS 257
Query: 292 VYGRNGKYKEVIDLFKEMLE-EGIRPDGIAFLTVISAC 328
+ GK + DLF EM EG D T++S+C
Sbjct: 258 SLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSC 295
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 168 bits (425), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 211/426 (49%), Gaps = 30/426 (7%)
Query: 42 TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN 101
T +I+ YA C F+ + + + FN + + + G A + M +
Sbjct: 440 TAVISMYAKC---GRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH 496
Query: 102 NVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
V D+ + L + +D G ++ + K G+ S V AL+++++K ++ A
Sbjct: 497 GVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAA 556
Query: 162 ALVFDEIP-EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTG 220
++FD+ EK+TV N +++GY G + + R+M V + + + T +RA
Sbjct: 557 IVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAE 616
Query: 221 LSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERS 280
LSA+ +G +HS +++ ++ V +SL++MY KCG+++ +++ F +E N
Sbjct: 617 LSALRVGMSVHSSLIQCGFCSQTPV--GNSLVDMYAKCGMIESSEKCF----IEISN--- 667
Query: 281 RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKY 340
+ +V W +ML Y +G + LF M E ++PD ++FL+V+SAC H G V G +
Sbjct: 668 KYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRI 727
Query: 341 FESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNAC 400
FE M K+ EHY+C+VDLL +AG +A E++ + K ++ +WGALLN+
Sbjct: 728 FEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKT----SVGVWGALLNSS 783
Query: 401 VDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVG 460
N+ L A + ++L+P N + + +G + V + ++K
Sbjct: 784 RMHCNLWLSNAALCQLVKLEPLNP----------SHYSQDRRLGEVNNVSR---IKKVPA 830
Query: 461 CSWVQV 466
CSW++V
Sbjct: 831 CSWIEV 836
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 174/376 (46%), Gaps = 22/376 (5%)
Query: 24 LHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFC 83
LHG +++ G F+ + LI Y C L + F+ + + + +++ +
Sbjct: 223 LHGLVIKKG---FIFAFSSGLIDMYCNCAD---LYAAESVFEEVWRKDESSWGTMMAAYA 276
Query: 84 RKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVF 143
GF L F M +V ++ A S L A++ V D+ G IH + + G V
Sbjct: 277 HNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVS 336
Query: 144 VGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR 203
V ++L+ +YSK ++ A +F I +++ V +A+++ Y +AG + + L R M +
Sbjct: 337 VATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIH 396
Query: 204 LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKK 263
+K + TL++ L+ C G++A LG+ +H Y ++ DIES++ +++I MY KCG
Sbjct: 397 IKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA--DIESELETATAVISMYAKCGRFSP 454
Query: 264 AQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLT 323
A + F+ + +D V + ++ Y + G + D++K M G+ PD +
Sbjct: 455 ALKAFERLPI-------KDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVG 507
Query: 324 VISACGHTGQVHAG-VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLY 382
++ C G Y + + + F H L+++ + L A L ++
Sbjct: 508 MLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAH--ALINMFTKCDALAAAIVLFDKC-- 563
Query: 383 KGMGNCTISMWGALLN 398
G T+S W ++N
Sbjct: 564 -GFEKSTVS-WNIMMN 577
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 180/397 (45%), Gaps = 31/397 (7%)
Query: 3 NSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHN 62
+++ L +C KN + ++HG+L+ +G H LI AY+ + L +
Sbjct: 6 TNLLLMLREC---KNFRCLLQVHGSLIVSGL-----KPHNQLINAYSL-FQRQDLSRV-- 54
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFM-HTNNVPLDTYALCSTLTASSRVN 121
F + + +N +I + R G AL F +M + D Y+ L A +
Sbjct: 55 IFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSM 114
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
D G +IH + ++G S V++G+ALV++Y K + A VFD++ K+ V N ++S
Sbjct: 115 DFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVS 174
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
G + G + L L M + D +L + A + L ++ R LH V++
Sbjct: 175 GLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF-- 232
Query: 242 ESDVF-LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
+F S LI+MY C + A+ VF + V ++E S W +M+ Y NG ++
Sbjct: 233 ---IFAFSSGLIDMYCNCADLYAAESVF--EEVWRKDESS-----WGTMMAAYAHNGFFE 282
Query: 301 EVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL 360
EV++LF M +R + +A + + A + G + G+ + + + S L
Sbjct: 283 EVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATS-L 341
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
+ + + GEL+ A + L+ + + + W A++
Sbjct: 342 MSMYSKCGELEIA-----EQLFINIEDRDVVSWSAMI 373
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 207/405 (51%), Gaps = 26/405 (6%)
Query: 71 NPLHFNV-----IISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNF 125
N L ++V +I + + G+ A F M N+ + +L S L+ + + D
Sbjct: 254 NQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNI-VAWNSLVSGLSYACLLKD--- 309
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLS 181
+ + + K G ++L Y+ L + A V ++ EK N V A+ S
Sbjct: 310 AEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFS 369
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
G + G + L++ KM + + T+S L+ LS + G+++H + LR ++
Sbjct: 370 GCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLR--KNL 427
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
D ++ ++L++MYGK G ++ A ++F G+++++ S W ML Y G+ +E
Sbjct: 428 ICDAYVATALVDMYGKSGDLQSAIEIFW--GIKNKSLAS-----WNCMLMGYAMFGRGEE 480
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
I F MLE G+ PD I F +V+S C ++G V G KYF+ M + + + P EH SC+V
Sbjct: 481 GIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMV 540
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDP 421
DLL R+G L +AW+ + K ++WGA L++C ++EL ++A +R L+P
Sbjct: 541 DLLGRSGYLDEAWDFIQTMSLKP----DATIWGAFLSSCKIHRDLELAEIAWKRLQVLEP 596
Query: 422 HNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
HN+ +++ NLY+ W+++ +R +++ +R SW+Q+
Sbjct: 597 HNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQI 641
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 116/496 (23%), Positives = 201/496 (40%), Gaps = 115/496 (23%)
Query: 24 LHGNLLRTGTLFFLHDLHTNLIAA----YATCLPKNHLQTLHNFFKCMNSTNPLHFNVII 79
+HG L++ G L + T +++A Y C+ L + F M + L +N I+
Sbjct: 9 IHGGLIKRG----LDNSDTRVVSASMGFYGRCVS---LGFANKLFDEMPKRDDLAWNEIV 61
Query: 80 SNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWS 139
R G A+ F M + + L S G+QIH +V +LG
Sbjct: 62 MVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLE 121
Query: 140 SSVFVGSALVDLYS-------------------------------KLSSVKDAALVFDEI 168
S+V + ++L+ +YS KL V DA + DE+
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181
Query: 169 P----EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAV 224
+ + V N+LLSGY GL + ++++M + LK ++S+ L+A +
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241
Query: 225 ELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKL-------------- 270
+LG+ +H Y+LR + + DV+++++LI+MY K G + A+ VF +
Sbjct: 242 KLGKAIHGYILR--NQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVS 299
Query: 271 -----------DGVESRNERS---RDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRP 316
+ + R E+ D + W S+ Y GK ++ +D+ +M E+G+ P
Sbjct: 300 GLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAP 359
Query: 317 DGIAFLTVISACGHTGQVHAGVKYFESMSNE-------------------FKLNPGPE-H 356
+ +++ + S C G +K F M E L+ G E H
Sbjct: 360 NVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVH 419
Query: 357 YSC--------------LVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVD 402
C LVD+ ++G+LQ A E ++ G+ N +++ W +L
Sbjct: 420 GFCLRKNLICDAYVATALVDMYGKSGDLQSAIE-----IFWGIKNKSLASWNCMLMGYAM 474
Query: 403 CGNIELGKLAGQRALE 418
G E G A LE
Sbjct: 475 FGRGEEGIAAFSVMLE 490
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 118/248 (47%), Gaps = 11/248 (4%)
Query: 125 FGKQIHAHVGKLGWSSS-VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
G IH + K G +S V SA + Y + S+ A +FDE+P+++ + N ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+G W + +EL R+M K T+ L+ C+ GRQ+H YVLR +ES
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRL--GLES 122
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
+V + +SLI MY + G ++ +++VF + + R++ W S+L Y + G + I
Sbjct: 123 NVSMCNSLIVMYSRNGKLELSRKVFN-------SMKDRNLSSWNSILSSYTKLGYVDDAI 175
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
L EM G++PD + + +++S G + + M L P S L+
Sbjct: 176 GLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQA 234
Query: 364 LCRAGELQ 371
+ G L+
Sbjct: 235 VAEPGHLK 242
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 96/223 (43%), Gaps = 2/223 (0%)
Query: 43 NLIAAYATC-LPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN 101
+L + YAT P+ L + + + N + + I S + G AL F M
Sbjct: 331 SLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE 390
Query: 102 NVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
V + + + L ++ ++ GK++H + +V +ALVD+Y K ++ A
Sbjct: 391 GVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSA 450
Query: 162 ALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGL 221
+F I K+ N +L GY G +G+ M ++ D T ++ L C
Sbjct: 451 IEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNS 510
Query: 222 SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKA 264
V+ G + ++R+ + I + S ++++ G+ G + +A
Sbjct: 511 GLVQEGWKYFD-LMRSRYGIIPTIEHCSCMVDLLGRSGYLDEA 552
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 169/317 (53%), Gaps = 13/317 (4%)
Query: 148 LVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYD 207
++ +S + +F +PEK+ + A++S + G + + L KM + +
Sbjct: 378 MIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPN 437
Query: 208 QFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQV 267
+T S+ L A L+ + G Q+H V++ +I +D+ +Q+SL+ MY KCG A ++
Sbjct: 438 SYTFSSVLSATASLADLIEGLQIHGRVVKM--NIVNDLSVQNSLVSMYCKCGNTNDAYKI 495
Query: 268 FKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISA 327
F ++V + +M+ Y NG K+ + LF + G P+G+ FL ++SA
Sbjct: 496 FSCIS-------EPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSA 548
Query: 328 CGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGN 387
C H G V G KYF+SM + + + PGP+HY+C+VDLL R+G L A L++ K
Sbjct: 549 CVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTMPCKPHS- 607
Query: 388 CTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLR 447
+WG+LL+A ++L +LA ++ +EL+P +A ++LS LY+ G + +
Sbjct: 608 ---GVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYVVLSQLYSIIGKNRDCDRIM 664
Query: 448 VVIKERGLRKDVGCSWV 464
+ K + ++KD G SW+
Sbjct: 665 NIKKSKRIKKDPGSSWI 681
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 157/392 (40%), Gaps = 97/392 (24%)
Query: 146 SALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVL-RL 204
S++V Y K+ + DA +FD + E+N + A++ GY +AG + G L +M +
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 205 KYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKA 264
K + TL+ +AC G Q+H V R +E D+FL +SL+ MY K G + +A
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMP--LEFDLFLGNSLMSMYSKLGYMGEA 329
Query: 265 QQVF--------------------------------------------KLDGVESRNERS 280
+ VF + G + E S
Sbjct: 330 KAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEIS 389
Query: 281 R-----------DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACG 329
+ D + WT+M+ + NG Y+E + F +ML++ + P+ F +V+SA
Sbjct: 390 KCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATA 449
Query: 330 HTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLN----------Q 379
+ G++ + +N S LV + C+ G A+++ +
Sbjct: 450 SLADLIEGLQIHGRVVKMNIVNDLSVQNS-LVSMYCKCGNTNDAYKIFSCISEPNIVSYN 508
Query: 380 TL-----YKGMGNCTISMWG---------------ALLNACVDCGNIELG-----KLAGQ 414
T+ Y G G + ++ ALL+ACV G ++LG +
Sbjct: 509 TMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSS 568
Query: 415 RALELDPHNAGICILLSNLYARFGMWDEIGHL 446
+E P + C++ +L R G+ D+ +L
Sbjct: 569 YNIEPGPDHYA-CMV--DLLGRSGLLDDASNL 597
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
Query: 42 TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN 101
T++I ++ K + F M + + + +IS F G+ AL F M
Sbjct: 376 TDMIKGFSG---KGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKMLQK 432
Query: 102 NVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
V ++Y S L+A++ + D+ G QIH V K+ + + V ++LV +Y K + DA
Sbjct: 433 EVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDA 492
Query: 162 ALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGL 221
+F I E N V N ++SGY G + L+L + + + T A L AC +
Sbjct: 493 YKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHV 552
Query: 222 SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQV 267
V+LG + ++++++IE + ++++ G+ GL+ A +
Sbjct: 553 GYVDLGWKYFK-SMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNL 597
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 196/370 (52%), Gaps = 15/370 (4%)
Query: 91 ALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK-LGWSSSV-FVGSAL 148
AL M NV + + A+ + L A S + + +GK H V + +S + V ++L
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL 363
Query: 149 VDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQ 208
+ +YS+ S ++ A +VF ++ + N+++SG+ + L+++M + +
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNH 423
Query: 209 FTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF 268
TL++ L + ++ G++ H Y+LR + + L +SL++MY K G + A++VF
Sbjct: 424 ITLASILPLFARVGNLQHGKEFHCYILRR-QSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 269 KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC 328
+ R RD V +TS++ YGR GK + + FK+M GI+PD + + V+SAC
Sbjct: 483 D-------SMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC 535
Query: 329 GHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNC 388
H+ V G F M + F + EHYSC+VDL CRAG L KA ++ + Y+
Sbjct: 536 SHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEP---- 591
Query: 389 TISMWGALLNACVDCGNIELGKLAGQR-ALELDPHNAGICILLSNLYARFGMWDEIGHLR 447
+ +M LL AC+ GN +G+ A + LE P + G +LL+++YA G W ++ ++
Sbjct: 592 SSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVK 651
Query: 448 VVIKERGLRK 457
++ + G++K
Sbjct: 652 TLLSDLGVQK 661
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 174/395 (44%), Gaps = 52/395 (13%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
++LH + + +G L F L L+ Y+ + QT+ + ++ PL +NV+I +
Sbjct: 103 QQLHAHCISSG-LEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH---PLPWNVLIGS 158
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
+ R +++ + M + + D + S + A + + D +G+ +H + +
Sbjct: 159 YIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCN 218
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYG----------------- 184
++V +AL+ +Y + V A +FD + E++ V NA+++ Y
Sbjct: 219 LYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYL 278
Query: 185 ------------------EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVEL 226
EAG + L V M ++ + L+AC+ + A++
Sbjct: 279 SGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKW 338
Query: 227 GRQLHSYVLRT---THDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
G+ H V+R+ +HDI++ +++SLI MY +C ++ A VF+ VE+ + +
Sbjct: 339 GKVFHCLVIRSCSFSHDIDN---VRNSLITMYSRCSDLRHAFIVFQ--QVEANS-----L 388
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFES 343
W S++ + N + +E L KEML G P+ I +++ G + G ++
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 344 MSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLN 378
+ ++ LVD+ ++GE+ A + +
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 9/225 (4%)
Query: 108 YALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDE 167
Y+ S L+ N+ G+Q+HAH G + LV YS + + +A + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 168 IPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELG 227
+ + N L+ Y + + + + ++M ++ D+FT + ++AC L G
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 228 RQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWT 287
R +H + ++H ++++ ++LI MY + G V A+++F RD V W
Sbjct: 204 RVVHGSIEVSSH--RCNLYVCNALISMYKRFGKVDVARRLFD-------RMSERDAVSWN 254
Query: 288 SMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTG 332
+++ Y K E L M G+ + + T+ C G
Sbjct: 255 AIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/370 (29%), Positives = 196/370 (52%), Gaps = 15/370 (4%)
Query: 91 ALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK-LGWSSSV-FVGSAL 148
AL M NV + + A+ + L A S + + +GK H V + +S + V ++L
Sbjct: 304 ALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSL 363
Query: 149 VDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQ 208
+ +YS+ S ++ A +VF ++ + N+++SG+ + L+++M + +
Sbjct: 364 ITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNH 423
Query: 209 FTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF 268
TL++ L + ++ G++ H Y+LR + + L +SL++MY K G + A++VF
Sbjct: 424 ITLASILPLFARVGNLQHGKEFHCYILRR-QSYKDCLILWNSLVDMYAKSGEIIAAKRVF 482
Query: 269 KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC 328
+ R RD V +TS++ YGR GK + + FK+M GI+PD + + V+SAC
Sbjct: 483 D-------SMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSAC 535
Query: 329 GHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNC 388
H+ V G F M + F + EHYSC+VDL CRAG L KA ++ + Y+
Sbjct: 536 SHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIFHTIPYEP---- 591
Query: 389 TISMWGALLNACVDCGNIELGKLAGQR-ALELDPHNAGICILLSNLYARFGMWDEIGHLR 447
+ +M LL AC+ GN +G+ A + LE P + G +LL+++YA G W ++ ++
Sbjct: 592 SSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSWSKLVTVK 651
Query: 448 VVIKERGLRK 457
++ + G++K
Sbjct: 652 TLLSDLGVQK 661
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 174/395 (44%), Gaps = 52/395 (13%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
++LH + + +G L F L L+ Y+ + QT+ + ++ PL +NV+I +
Sbjct: 103 QQLHAHCISSG-LEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILH---PLPWNVLIGS 158
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSS 141
+ R +++ + M + + D + S + A + + D +G+ +H + +
Sbjct: 159 YIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCN 218
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYG----------------- 184
++V +AL+ +Y + V A +FD + E++ V NA+++ Y
Sbjct: 219 LYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYL 278
Query: 185 ------------------EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVEL 226
EAG + L V M ++ + L+AC+ + A++
Sbjct: 279 SGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKW 338
Query: 227 GRQLHSYVLRT---THDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
G+ H V+R+ +HDI++ +++SLI MY +C ++ A VF+ VE+ + +
Sbjct: 339 GKVFHCLVIRSCSFSHDIDN---VRNSLITMYSRCSDLRHAFIVFQ--QVEANS-----L 388
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFES 343
W S++ + N + +E L KEML G P+ I +++ G + G ++
Sbjct: 389 STWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCY 448
Query: 344 MSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLN 378
+ ++ LVD+ ++GE+ A + +
Sbjct: 449 ILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFD 483
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 9/225 (4%)
Query: 108 YALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDE 167
Y+ S L+ N+ G+Q+HAH G + LV YS + + +A + +
Sbjct: 84 YSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITEN 143
Query: 168 IPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELG 227
+ + N L+ Y + + + + ++M ++ D+FT + ++AC L G
Sbjct: 144 SEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYG 203
Query: 228 RQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWT 287
R +H + ++H ++++ ++LI MY + G V A+++F RD V W
Sbjct: 204 RVVHGSIEVSSH--RCNLYVCNALISMYKRFGKVDVARRLFD-------RMSERDAVSWN 254
Query: 288 SMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTG 332
+++ Y K E L M G+ + + T+ C G
Sbjct: 255 AIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 208/409 (50%), Gaps = 21/409 (5%)
Query: 64 FKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
F M + + +N +I + G +AL F M + D Y + ++ S + ++
Sbjct: 192 FLTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLREL 251
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
+ GKQ A K+G+ S+ V A +D++SK + + D+ +F E+ + ++V N+++ Y
Sbjct: 252 SKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSY 311
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVEL--GRQLHSYVLRTTHDI 241
L L ++ D+FT S+ L + ++AV L G +HS V++ D+
Sbjct: 312 SWHCCGEDALRLFILAMTQSVRPDKFTFSSVL---SSMNAVMLDHGADVHSLVIKLGFDL 368
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVF-KLDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
++ V +SL+EMY K G V A VF K DG +D++ W +++ RN +
Sbjct: 369 DTAV--ATSLMEMYFKTGSVDLAMGVFAKTDG--------KDLIFWNTVIMGLARNSRAV 418
Query: 301 EVIDLFKEML-EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSC 359
E + +F ++L + ++PD + + ++ AC + G V+ G++ F SM +NPG EHY+C
Sbjct: 419 ESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYAC 478
Query: 360 LVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALEL 419
+++LLCR G + +A ++ ++ ++ + +W +L A +D G+ L + + LE
Sbjct: 479 IIELLCRVGMINEAKDIADKIPFEPSSH----IWEPILCASLDLGDTRLAETVAKTMLES 534
Query: 420 DPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQVTS 468
+P ++ ++L +Y W+ LR + E L+ G S + + S
Sbjct: 535 EPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIES 583
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 113/273 (41%), Gaps = 52/273 (19%)
Query: 125 FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYG 184
K +HA + + G+ + + G+ + LY K SV +A +FD+IP+KNT+ N L G
Sbjct: 22 LAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLKGLF 81
Query: 185 EAGLWAQGLELVRKMPV----------------------LRLKYD---------QFTLS- 212
+ G L+L +MP +R+ +D +FT S
Sbjct: 82 KNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSI 141
Query: 213 -AALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLD 271
A+L C V G Q+H + + ++ + +S+++MY + G+ A VF
Sbjct: 142 LASLVTC-----VRHGEQIHGNAICSGVS-RYNLVVWNSVMDMYRRLGVFDYALSVF--- 192
Query: 272 GVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHT 331
RDVV W ++ +G + +D F M E I+PD V+S C
Sbjct: 193 ----LTMEDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDL 248
Query: 332 GQVHAGVKYFE------SMSNEFKLNPGPEHYS 358
++ G + +SN L G + +S
Sbjct: 249 RELSKGKQALALCIKMGFLSNSIVLGAGIDMFS 281
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 129/454 (28%), Positives = 219/454 (48%), Gaps = 27/454 (5%)
Query: 22 KKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISN 81
K++HG L+ G ++ + +I+ Y C F+ + N + +N +I+
Sbjct: 177 KQVHGLALKLGLHCSIY-VANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAA 235
Query: 82 FCRKGFPFLALTAFSFMHTNNVPLDTYAL---CSTLTASSRVNDVNFGK---QIHAHVGK 135
F A+ F MH++ V D L CS+L SS + K Q+H+ K
Sbjct: 236 FQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVK 295
Query: 136 LGWSSSVFVGSALVDLYSK-LSSVKDAALVFDEIPE-KNTVCANALLSGYGEAGLWAQGL 193
G + V +AL+ +YS+ L D +F E+ ++ V N +++ + + +
Sbjct: 296 SGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAVYDP-ERAI 354
Query: 194 ELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIE 253
L ++ +L D +T S+ L+AC GL +H+ V++ +D L +SLI
Sbjct: 355 HLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKG--GFLADTVLNNSLIH 412
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
Y KCG + +VF D ++SR DVV W SML Y +G+ ++ +F++M
Sbjct: 413 AYAKCGSLDLCMRVF--DDMDSR-----DVVSWNSMLKAYSLHGQVDSILPVFQKM---D 462
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
I PD F+ ++SAC H G+V G++ F SM + + P HY+C++D+L RA +A
Sbjct: 463 INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEA 522
Query: 374 WELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALEL-DPHNAGICILLSN 432
E++ Q + +W ALL +C GN LGKLA + EL +P N+ I +SN
Sbjct: 523 EEVIKQMPM----DPDAVVWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSN 578
Query: 433 LYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
+Y G ++E ++ +RK+ SW ++
Sbjct: 579 IYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEI 612
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 118/238 (49%), Gaps = 16/238 (6%)
Query: 94 AFSFMHTNNVPLDTY-ALCSTLTASSRVNDVNFGKQIHAHV--GKLGWSSSVFVGSALVD 150
A S ++ V L + A + A + ++ G +H H+ +S +V + + L++
Sbjct: 45 AVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLIN 104
Query: 151 LYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFT 210
+Y+K ++ A VFD +PE+N V AL++GY +AG +G L M + ++FT
Sbjct: 105 MYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSM-LSHCFPNEFT 163
Query: 211 LSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKL 270
LS+ L +C E G+Q+H L+ + +++ +++I MYG+C A + + +
Sbjct: 164 LSSVLTSCR----YEPGKQVHGLALKL--GLHCSIYVANAVISMYGRCHDGAAAYEAWTV 217
Query: 271 -DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISA 327
+ ++ +N +V W SM+ + K+ I +F M +G+ D L + S+
Sbjct: 218 FEAIKFKN-----LVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 204/422 (48%), Gaps = 36/422 (8%)
Query: 52 LPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN-----NVPLD 106
L L F + + + +N+IIS++ +KG A + FS M N+ +
Sbjct: 181 LESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIG 240
Query: 107 TYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFD 166
Y C + + D K + W + ++ Y+KL V+ A +F
Sbjct: 241 GYVNCREMKLARTYFDAMPQKN------GVSWIT-------MISGYTKLGDVQSAEELFR 287
Query: 167 EIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKY---DQFTLSAALRACTGLSA 223
+ +K+ + +A+++ Y + G L+L +M + R Y D+ TLS+ + A + L
Sbjct: 288 LMSKKDKLVYDAMIACYTQNGKPKDALKLFAQM-LERNSYIQPDEITLSSVVSANSQLGN 346
Query: 224 VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
G + SY+ T H I+ D L +SLI++Y K G KA ++F N +D
Sbjct: 347 TSFGTWVESYI--TEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFS-------NLNKKDT 397
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFES 343
V +++M+ G NG E LF M+E+ I P+ + F ++SA H+G V G K F S
Sbjct: 398 VSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNS 457
Query: 344 MSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDC 403
M + L P +HY +VD+L RAG L++A+EL+ + +WGALL A
Sbjct: 458 MKDH-NLEPSADHYGIMVDMLGRAGRLEEAYELIKSMPMQP----NAGVWGALLLASGLH 512
Query: 404 GNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSW 463
N+E G++A ++L+ G L+ +Y+ G WD+ +R IKE+ L K +GCSW
Sbjct: 513 NNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSW 572
Query: 464 VQ 465
V+
Sbjct: 573 VE 574
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 146/304 (48%), Gaps = 31/304 (10%)
Query: 98 MHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSS 157
MH + +P ++A+ S L A ++ ++ GK IHA K G V+V + LV LYS+L
Sbjct: 95 MHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGY 154
Query: 158 VKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALR- 216
++ A FD+I EKNTV N+LL GY E+G + + K+P +S+ +
Sbjct: 155 IELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKK 214
Query: 217 -----ACTGLSAVELGRQLHSYVL-------------RTTHDI--ESDVFLQSSLIEMYG 256
AC+ SA+ L +L RT D + + ++I Y
Sbjct: 215 GDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYT 274
Query: 257 KCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG--I 314
K G V+ A+++F+L +D +++ +M+ Y +NGK K+ + LF +MLE I
Sbjct: 275 KLGDVQSAEELFRL-------MSKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYI 327
Query: 315 RPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAW 374
+PD I +V+SA G G + ES E + + L+DL + G+ KA+
Sbjct: 328 QPDEITLSSVVSANSQLGNTSFGT-WVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAF 386
Query: 375 ELLN 378
++ +
Sbjct: 387 KMFS 390
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 171/321 (53%), Gaps = 13/321 (4%)
Query: 146 SALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLK 205
S L+ Y + A +F+ +PEKN V L++G+ + G + + +M LK
Sbjct: 231 STLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLK 290
Query: 206 YDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQ 265
+++T++A L AC+ A+ G ++H Y+L + I+ D + ++L++MY KCG + A
Sbjct: 291 PNEYTIAAVLSACSKSGALGSGIRIHGYIL--DNGIKLDRAIGTALVDMYAKCGELDCAA 348
Query: 266 QVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVI 325
VF N +D++ WT+M+ + +G++ + I F++M+ G +PD + FL V+
Sbjct: 349 TVFS-------NMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVL 401
Query: 326 SACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGM 385
+AC ++ +V G+ +F+SM ++ + P +HY +VDLL RAG+L +A EL+
Sbjct: 402 TACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPI--- 458
Query: 386 GNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGH 445
N ++ W AL AC + Q LELDP G I L +A G ++
Sbjct: 459 -NPDLTTWAALYRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEK 517
Query: 446 LRVVIKERGLRKDVGCSWVQV 466
R+ +++R + +G S++++
Sbjct: 518 RRLSLQKRIKERSLGWSYIEL 538
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 167/399 (41%), Gaps = 69/399 (17%)
Query: 7 QFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATC--LPKNHLQTLHNFF 64
F+ H K+ ++++ +H +LR G L + + A +C L K+ +L + F
Sbjct: 31 HFISLIHACKDTASLRHVHAQILRRGVL------SSRVAAQLVSCSSLLKSPDYSL-SIF 83
Query: 65 KCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVN 124
+ NP N +I ++ F M V D L ++S++
Sbjct: 84 RNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRW 143
Query: 125 FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALL 180
G+ +HA K FV +LVD+Y+K +K A VF+E P++ + + N L+
Sbjct: 144 LGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLI 203
Query: 181 SGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD 240
+GY A L R MP
Sbjct: 204 NGYCRAKDMHMATTLFRSMP---------------------------------------- 223
Query: 241 IESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
E + S+LI+ Y G + +A+Q+F+L ++VV WT+++ + + G Y+
Sbjct: 224 -ERNSGSWSTLIKGYVDSGELNRAKQLFEL-------MPEKNVVSWTTLINGFSQTGDYE 275
Query: 301 EVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK-YFESMSNEFKLNPGPEHYSC 359
I + EMLE+G++P+ V+SAC +G + +G++ + + N KL+ +
Sbjct: 276 TAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIG--TA 333
Query: 360 LVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLN 398
LVD+ + GEL A T++ M + I W A++
Sbjct: 334 LVDMYAKCGELDCA-----ATVFSNMNHKDILSWTAMIQ 367
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 120/270 (44%), Gaps = 10/270 (3%)
Query: 42 TNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN 101
+ LI Y N + L F+ M N + + +I+ F + G A++ + M
Sbjct: 231 STLIKGYVDSGELNRAKQL---FELMPEKNVVSWTTLINGFSQTGDYETAISTYFEMLEK 287
Query: 102 NVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
+ + Y + + L+A S+ + G +IH ++ G +G+ALVD+Y+K + A
Sbjct: 288 GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCA 347
Query: 162 ALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGL 221
A VF + K+ + A++ G+ G + Q ++ R+M K D+ A L AC
Sbjct: 348 ATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNS 407
Query: 222 SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR 281
S V+LG +R + IE + ++++ G+ G + +A ++ + +
Sbjct: 408 SEVDLGLNFFD-SMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINP------ 460
Query: 282 DVVLWTSMLGVYGRNGKYKEVIDLFKEMLE 311
D+ W ++ + Y+ + + +LE
Sbjct: 461 DLTTWAALYRACKAHKGYRRAESVSQNLLE 490
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/396 (28%), Positives = 200/396 (50%), Gaps = 45/396 (11%)
Query: 104 PLDTYALCSTLTASS--RVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA 161
P D++ L ASS R + G +H KLG+ S V+V +ALV +Y ++ DA
Sbjct: 118 PFDSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDA 177
Query: 162 ALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMP--------------------- 200
VFDE+PE+N V N +++G G + + L + KMP
Sbjct: 178 HKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPK 237
Query: 201 --VL---------RLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQS 249
+L +K ++ T+ A L A L +++ +H+YV + + D+ + +
Sbjct: 238 EAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGF-VPCDIRVTN 296
Query: 250 SLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
SLI+ Y KCG ++ A + F +E N R +++V WT+M+ + +G KE + +FK+M
Sbjct: 297 SLIDAYAKCGCIQSAFKFF----IEIPNGR-KNLVSWTTMISAFAIHGMGKEAVSMFKDM 351
Query: 310 LEEGIRPDGIAFLTVISACGHTGQVHAG-VKYFESMSNEFKLNPGPEHYSCLVDLLCRAG 368
G++P+ + ++V++AC H G +++F +M NE+K+ P +HY CLVD+L R G
Sbjct: 352 ERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKG 411
Query: 369 ELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICI 428
L++A ++ + + +W LL AC + EL + ++ +EL+ + G +
Sbjct: 412 RLEEAEKIALEIPIEEKA----VVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYV 467
Query: 429 LLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWV 464
L+SN++ G + + R + RG+ K G S V
Sbjct: 468 LMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 128/471 (27%), Positives = 230/471 (48%), Gaps = 39/471 (8%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTG---TLFFLHDLHTNLIAAYATCLPKNHLQTL 60
S + + C + N+ A +LH +++ G + F T+L+ Y C +
Sbjct: 144 SFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCF----PSTSLVHFYGKC---GLIVEA 196
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTN-NVPLDTYALCSTLTASSR 119
F+ + + + +N ++S++ G A M ++ N Y S+L ++ R
Sbjct: 197 RRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR 256
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANAL 179
+ GKQIHA + K+ + + V +AL+++Y+K + + DA F+ + +N V NA+
Sbjct: 257 IEQ---GKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAM 313
Query: 180 LSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRT-T 238
+ G+ + G + + L +M + L+ D+ T ++ L +C SA+ +Q+ + V + +
Sbjct: 314 IVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGS 373
Query: 239 HDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGK 298
D S + +SLI Y + G + +A F + R D+V WTS++G +G
Sbjct: 374 ADFLS---VANSLISSYSRNGNLSEALLCF-------HSIREPDLVSWTSVIGALASHGF 423
Query: 299 YKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYS 358
+E + +F+ ML++ ++PD I FL V+SAC H G V G++ F+ M+ +K+ EHY+
Sbjct: 424 AEESLQMFESMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYT 482
Query: 359 CLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALE 418
CL+DLL RAG + +A ++LN + + A C E K ++ LE
Sbjct: 483 CLIDLLGRAGFIDEASDVLNSMPTEP----STHALAAFTGGCNIHEKRESMKWGAKKLLE 538
Query: 419 LDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLR-----KDVGCSWV 464
++P +LSN Y G W++ LR +R R K GCSW+
Sbjct: 539 IEPTKPVNYSILSNAYVSEGHWNQAALLR----KRERRNCYNPKTPGCSWL 585
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 160/328 (48%), Gaps = 40/328 (12%)
Query: 17 NLSAIKKLHGNLLRTG---TLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPL 73
+LS +K+ HG +++ G +LF L L+ AY F M N +
Sbjct: 51 HLSDVKQEHGFMVKQGIYNSLF----LQNKLLQAYTKI---REFDDADKLFDEMPLRNIV 103
Query: 74 HFNVIISNFCRK----------GFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV 123
+N++I ++ GF +L+ F+ +V LD + + + ++
Sbjct: 104 TWNILIHGVIQRDGDTNHRAHLGFCYLSRILFT-----DVSLDHVSFMGLIRLCTDSTNM 158
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY 183
G Q+H + K G SS F ++LV Y K + +A VF+ + +++ V NAL+S Y
Sbjct: 159 KAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSY 218
Query: 184 GEAGLWAQGLELVRKM--PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
G+ + L++ M R + D FT S+ L AC +E G+Q+H+ + + ++
Sbjct: 219 VLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQF 274
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
D+ + ++L+ MY K + A++ F+ V R+VV W +M+ + +NG+ +E
Sbjct: 275 --DIPVATALLNMYAKSNHLSDARECFESMVV-------RNVVSWNAMIVGFAQNGEGRE 325
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACG 329
+ LF +ML E ++PD + F +V+S+C
Sbjct: 326 AMRLFGQMLLENLQPDELTFASVLSSCA 353
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 37/341 (10%)
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGY--- 183
KQ H + K G +S+F+ + L+ Y+K+ DA +FDE+P +N V N L+ G
Sbjct: 56 KQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQR 115
Query: 184 -GEAGLWAQ-GLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
G+ A G + ++ + D + +R CT + ++ G QLH +++ +
Sbjct: 116 DGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVK--QGL 173
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFK--LDGVESRNERSRDVVLWTSMLGVYGRNGKY 299
ES F +SL+ YGKCGL+ +A++VF+ LD RD+VLW +++ Y NG
Sbjct: 174 ESSCFPSTSLVHFYGKCGLIVEARRVFEAVLD---------RDLVLWNALVSSYVLNGMI 224
Query: 300 KEVIDLFKEMLEEG--IRPDGIAFLTVISAC--GHTGQVHAGVKYFESMSNEFKLNPGPE 355
E L K M + R D F +++SAC Q+HA +S +F +
Sbjct: 225 DEAFGLLKLMGSDKNRFRGDYFTFSSLLSACRIEQGKQIHA---ILFKVSYQFDIPVA-- 279
Query: 356 HYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGN-IELGKLAGQ 414
+ L+++ ++ L A E + + + W A++ G E +L GQ
Sbjct: 280 --TALLNMYAKSNHLSDARECFESMVVR-----NVVSWNAMIVGFAQNGEGREAMRLFGQ 332
Query: 415 RALE-LDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERG 454
LE L P +LS+ +W EI ++ ++ ++G
Sbjct: 333 MLLENLQPDELTFASVLSSCAKFSAIW-EIKQVQAMVTKKG 372
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 123/458 (26%), Positives = 208/458 (45%), Gaps = 16/458 (3%)
Query: 9 LHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMN 68
L C ++L K++H ++ G D+ L+ Y C + F M
Sbjct: 332 LSLCSAVRSLDFGKQIHSQTIKVG-FEDSTDVGNALVDMYMKCSASEVEAS--RVFGAMV 388
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
S N + + +I GF M V + L L A S++ V +
Sbjct: 389 SPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLE 448
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGL 188
IHA++ + + VG++LVD Y+ V A V + ++ + +L++ + E G
Sbjct: 449 IHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGK 508
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
L ++ M ++ DQ +L + A L A+E G+ LH Y +++ + V
Sbjct: 509 HEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVL-- 566
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
+SL++MY KCG ++ A++VF+ + DVV W ++ NG + F+E
Sbjct: 567 NSLVDMYSKCGSLEDAKKVFE-------EIATPDVVSWNGLVSGLASNGFISSALSAFEE 619
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAG 368
M + PD + FL ++SAC + G++YF+ M + + P EHY LV +L RAG
Sbjct: 620 MRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAG 679
Query: 369 ELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICI 428
L++A ++ K N I + LL AC GN+ LG+ + L L P + + I
Sbjct: 680 RLEEATGVVETMHLK--PNAMI--FKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYI 735
Query: 429 LLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
LL++LY G + R ++ E+ L K +G S V+V
Sbjct: 736 LLADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEV 773
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 186/403 (46%), Gaps = 25/403 (6%)
Query: 24 LHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFC 83
+H +++ G L L DL NL++ Y L + + F M+ + V+IS F
Sbjct: 45 IHCPVIKFGLLENL-DLCNNLLSLY---LKTDGIWNARKLFDEMSHRTVFAWTVMISAFT 100
Query: 84 RKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVF 143
+ AL+ F M + + + S + + + + D+++G ++H V K G+ +
Sbjct: 101 KSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSV 160
Query: 144 VGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR 203
VGS+L DLYSK K+A +F + +T+ ++S A W + L+ +M
Sbjct: 161 VGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAG 220
Query: 204 LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKK 263
+ ++FT L A + L +E G+ +HS ++ I +V L++SL++ Y + ++
Sbjct: 221 VPPNEFTFVKLLGASSFL-GLEFGKTIHSNII--VRGIPLNVVLKTSLVDFYSQFSKMED 277
Query: 264 AQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLT 323
A +V G +DV LWTS++ + RN + KE + F EM G++P+ +
Sbjct: 278 AVRVLNSSG-------EQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSA 330
Query: 324 VISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLL--CRAGELQKAWELLNQTL 381
++S C + G K S + + + + LVD+ C A E++ + +
Sbjct: 331 ILSLCSAVRSLDFG-KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEAS------RV 383
Query: 382 YKGMGNCTISMWGALLNACVDCGNIE--LGKLAGQRALELDPH 422
+ M + + W L+ VD G ++ G L E++P+
Sbjct: 384 FGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPN 426
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 144/313 (46%), Gaps = 18/313 (5%)
Query: 121 NDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALL 180
N G IH V K G ++ + + L+ LY K + +A +FDE+ + ++
Sbjct: 37 NSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMI 96
Query: 181 SGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD 240
S + ++ +A L L +M ++FT S+ +R+C GL + G ++H V++T
Sbjct: 97 SAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKT--G 154
Query: 241 IESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
E + + SSL ++Y KCG K+A ++F + ++ D + WT M+ K++
Sbjct: 155 FEGNSVVGSSLSDLYSKCGQFKEACELFS-------SLQNADTISWTMMISSLVGARKWR 207
Query: 301 EVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL 360
E + + EM++ G+ P+ F+ ++ A G + + LN + + L
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLK--TSL 265
Query: 361 VDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDC--GNIELGKLAGQRALE 418
VD + +++ A +LN + G + +W ++++ V +G R+L
Sbjct: 266 VDFYSQFSKMEDAVRVLNSS-----GEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLG 320
Query: 419 LDPHNAGICILLS 431
L P+N +LS
Sbjct: 321 LQPNNFTYSAILS 333
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 189/384 (49%), Gaps = 27/384 (7%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCM 67
L+ C +++HGN+++ G + + ++L+ YA C L + F M
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGVGNLI--VESSLVYFYAQC---GELTSALRAFDMM 244
Query: 68 NSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGK 127
+ + + +IS RKG A+ F M + + + +CS L A S + FG+
Sbjct: 245 EEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGR 304
Query: 128 QIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG 187
Q+H+ V K + VFVG++L+D+Y+K + D VFD + +NTV ++++ + G
Sbjct: 305 QVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREG 364
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
+ + L R M L + T+ + LRAC + A+ LG++LH+ +++ + IE +V++
Sbjct: 365 FGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS--IEKNVYI 422
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
S+L+ +Y KCG + A V + SRDVV WT+M+ G E +D K
Sbjct: 423 GSTLVWLYCKCGESRDAFNVLQ-------QLPSRDVVSWTAMISGCSSLGHESEALDFLK 475
Query: 308 EMLEEGIRPDGIAFLTVISACGHTG------QVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
EM++EG+ P+ + + + AC ++ +H+ K ++SN F S L+
Sbjct: 476 EMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFV-------GSALI 528
Query: 362 DLLCRAGELQKAWELLNQTLYKGM 385
+ + G + +A+ + + K +
Sbjct: 529 HMYAKCGFVSEAFRVFDSMPEKNL 552
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/330 (29%), Positives = 167/330 (50%), Gaps = 21/330 (6%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHG----NLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQT 59
++ L C K L +++H +++T + T+L+ YA C +
Sbjct: 286 TVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVF-----VGTSLMDMYAKC---GEISD 337
Query: 60 LHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSR 119
F M++ N + + II+ R+GF A++ F M ++ + + S L A
Sbjct: 338 CRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGS 397
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANAL 179
V + GK++HA + K +V++GS LV LY K +DA V ++P ++ V A+
Sbjct: 398 VGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAM 457
Query: 180 LSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTH 239
+SG G ++ L+ +++M ++ + FT S+AL+AC ++ +GR +HS + + H
Sbjct: 458 ISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHS-IAKKNH 516
Query: 240 DIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKY 299
+ S+VF+ S+LI MY KCG V +A +VF D + +N +V W +M+ Y RNG
Sbjct: 517 AL-SNVFVGSALIHMYAKCGFVSEAFRVF--DSMPEKN-----LVSWKAMIMGYARNGFC 568
Query: 300 KEVIDLFKEMLEEGIRPDGIAFLTVISACG 329
+E + L M EG D F T++S CG
Sbjct: 569 REALKLMYRMEAEGFEVDDYIFATILSTCG 598
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 19/293 (6%)
Query: 108 YALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDE 167
YAL + SS N + K+IHA K ++ G+ L+ +L + A VFD
Sbjct: 85 YALLAEWLQSS--NGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDS 142
Query: 168 IPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKY-DQFTLSAALRACTGLSAVEL 226
+PEKNTV A++ GY + GL + L +++ ++ L C+ + EL
Sbjct: 143 MPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFEL 202
Query: 227 GRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLW 286
GRQ+H +++ ++ ++SSL+ Y +CG + A + F + +DV+ W
Sbjct: 203 GRQVHGNMVKVG---VGNLIVESSLVYFYAQCGELTSALRAFDM-------MEEKDVISW 252
Query: 287 TSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSN 346
T+++ R G + I +F ML P+ +++ AC + G + S+
Sbjct: 253 TAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFG-RQVHSLVV 311
Query: 347 EFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
+ + + L+D+ + GE+ + ++ GM N W +++ A
Sbjct: 312 KRMIKTDVFVGTSLMDMYAKCGEISDC-----RKVFDGMSNRNTVTWTSIIAA 359
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 191/419 (45%), Gaps = 49/419 (11%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N +I ++ G +L F+ M ++V + S + A+ V++G +H
Sbjct: 54 YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQAL 113
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
K G+ FV ++ V Y ++ ++ + +FD+I V N+LL G G E
Sbjct: 114 KRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFE 173
Query: 195 LVRKMPVLR----------------------------------LKYDQFTLSAALRACTG 220
++MPV + ++ T + L +C
Sbjct: 174 YFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCAN 233
Query: 221 LS--AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNE 278
+ LG+Q+H YV+ + +I L ++L++MYGK G ++ A +F D +
Sbjct: 234 FDQGGIRLGKQIHGYVM--SKEIILTTTLGTALLDMYGKAGDLEMALTIF--DQI----- 284
Query: 279 RSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGV 338
R + V W +++ NG+ K+ +++F+ M + P+GI L +++AC + V G+
Sbjct: 285 RDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGI 344
Query: 339 KYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLN 398
+ F S+ +E+K+ P EHY C+VDL+ RAG L A + ++ S+ GALL
Sbjct: 345 QLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEP----DASVLGALLG 400
Query: 399 ACVDCGNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRK 457
AC N ELG G++ + L P + G + LS A W E +R + E G+RK
Sbjct: 401 ACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRK 459
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 203/413 (49%), Gaps = 17/413 (4%)
Query: 55 NHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTL 114
+H H F M N + + +IS + + F M N+ + L S L
Sbjct: 200 DHAAAFH-VFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVL 258
Query: 115 TASSRVN-DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNT 173
A +N + K+IH + G + + +A + +Y + +V + ++F+ ++
Sbjct: 259 PACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDV 318
Query: 174 VCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSY 233
V ++++SGY E G ++ + L+ +M ++ + TL A + ACT + + +HS
Sbjct: 319 VMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQ 378
Query: 234 VLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVY 293
+L+ S + L ++LI+MY KCG + A++VF +D+V W+SM+ Y
Sbjct: 379 ILKC--GFMSHILLGNALIDMYAKCGSLSAAREVF-------YELTEKDLVSWSSMINAY 429
Query: 294 GRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPG 353
G +G E +++FK M++ G D +AFL ++SAC H G V F + + ++ +
Sbjct: 430 GLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKYHMPVT 488
Query: 354 PEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIEL-GKLA 412
EHY+C ++LL R G++ A+E+ K + +W +LL+AC G +++ GK+
Sbjct: 489 LEHYACYINLLGRFGKIDDAFEVTINMPMKP----SARIWSSLLSACETHGRLDVAGKII 544
Query: 413 GQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
++ +P N +LLS ++ G + +R V++ R L K G S ++
Sbjct: 545 ANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 173/371 (46%), Gaps = 43/371 (11%)
Query: 43 NLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTA------FS 96
+LI+ YA K + F M + + + II++ C+ G + A+ +
Sbjct: 87 SLISMYAKFSRK---YAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYG 143
Query: 97 FMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHV-GKLGWSSSVFVGSALVDLYSKL 155
F+ + + ALC+ + +SS+V + HA V SV + +ALVD+Y K
Sbjct: 144 FIPKSELVASLLALCTRMGSSSKV-----ARMFHALVLVDERMQESVLLSTALVDMYLKF 198
Query: 156 SSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAAL 215
A VFD++ KN V A++SG + G++L R M L+ ++ TL + L
Sbjct: 199 DDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVL 258
Query: 216 RACTGLS-AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVE 274
AC L+ L +++H + R H +D L ++ + MY +CG V ++ +F+ V
Sbjct: 259 PACVELNYGSSLVKEIHGFSFR--HGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKV- 315
Query: 275 SRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHT--- 331
RDVV+W+SM+ Y G EV++L +M +EGI + + L ++SAC ++
Sbjct: 316 ------RDVVMWSSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLL 369
Query: 332 ---GQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNC 388
VH+ + MS+ N L+D+ + G L A E+ + K + +
Sbjct: 370 SFASTVHSQILKCGFMSHILLGNA-------LIDMYAKCGSLSAAREVFYELTEKDLVS- 421
Query: 389 TISMWGALLNA 399
W +++NA
Sbjct: 422 ----WSSMINA 428
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 132/282 (46%), Gaps = 14/282 (4%)
Query: 125 FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYG 184
G Q+H K G V ++L+ +Y+K S VFDE+ ++TV ++++
Sbjct: 65 LGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCC 124
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGL-SAVELGRQLHSYVLRTTHDIES 243
+ GL + ++L+++M +++ L CT + S+ ++ R H+ VL ++
Sbjct: 125 QDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVL-VDERMQE 183
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
V L ++L++MY K A VF D +E +NE V WT+M+ N Y+ +
Sbjct: 184 SVLLSTALVDMYLKFDDHAAAFHVF--DQMEVKNE-----VSWTAMISGCVANQNYEMGV 236
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
DLF+ M E +RP+ + L+V+ AC + VK S + + + +
Sbjct: 237 DLFRAMQRENLRPNRVTLLSVLPACVELNYGSSLVKEIHGFSFRHGCHADERLTAAFMTM 296
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGN 405
CR G + L++ L++ + MW ++++ + G+
Sbjct: 297 YCRCGNVS-----LSRVLFETSKVRDVVMWSSMISGYAETGD 333
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 158/375 (42%), Gaps = 58/375 (15%)
Query: 19 SAIKKLHGNLLRTGTLFFLHDLHTN--LIAAYATCLPK-NHLQTLHNFFKCMNSTNPLHF 75
S +K++HG F H H + L AA+ T + ++ F+ + + +
Sbjct: 269 SLVKEIHG-------FSFRHGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMW 321
Query: 76 NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
+ +IS + G + + M + ++ L + ++A + ++F +H+ + K
Sbjct: 322 SSMISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILK 381
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLEL 195
G+ S + +G+AL+D+Y+K S+ A VF E+ EK+ V +++++ YG G ++ LE+
Sbjct: 382 CGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEI 441
Query: 196 VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
+ M ++ H+++ FL +++
Sbjct: 442 FKGM-----------------------------------IKGGHEVDDMAFL--AILSAC 464
Query: 256 GKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIR 315
GLV++AQ +F G + ++LG +G+ + D F+ + ++
Sbjct: 465 NHAGLVEEAQTIFTQAGKYHMPVTLEHYACYINLLGRFGK------IDDAFEVTINMPMK 518
Query: 316 PDGIAFLTVISACGHTGQVHAGVKYFESMSNEF-KLNP-GPEHYSCLVDLLCRAGELQKA 373
P + +++SAC G++ K ++NE K P P +Y L + +G A
Sbjct: 519 PSARIWSSLLSACETHGRLDVAGKI---IANELMKSEPDNPANYVLLSKIHTESGNYHAA 575
Query: 374 WELLNQTLYKGMGNC 388
E+ + + C
Sbjct: 576 EEVRRVMQRRKLNKC 590
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 184/361 (50%), Gaps = 27/361 (7%)
Query: 110 LCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVG----SALVDLYSKLSSVKDAALVF 165
L ST+ A R N +++ L W S+ G + +++ K+ A V
Sbjct: 68 LVSTVAAYRRCNRSYLARRL------LLWFLSLSPGVCNINLIIESLMKIGESGLAKKVL 121
Query: 166 DEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM-PVLRLKYDQFTLSAALRACTGLSAV 224
++N + N ++ GY + + L+ ++ M +K ++F+ +++L AC L +
Sbjct: 122 RNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDL 181
Query: 225 ELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVV 284
+ +HS ++ + IE + L S+L+++Y KCG + +++VF + + DV
Sbjct: 182 HHAKWVHSLMIDS--GIELNAILSSALVDVYAKCGDIGTSREVF-------YSVKRNDVS 232
Query: 285 LWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
+W +M+ + +G E I +F EM E + PD I FL +++ C H G + G +YF M
Sbjct: 233 IWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLM 292
Query: 345 SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG 404
S F + P EHY +VDLL RAG +++A+EL+ + + +W +LL++
Sbjct: 293 SRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEP----DVVIWRSLLSSSRTYK 348
Query: 405 NIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSWV 464
N ELG++A Q L +G +LLSN+Y+ W+ +R ++ + G+RK G SW+
Sbjct: 349 NPELGEIAIQ---NLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWL 405
Query: 465 Q 465
+
Sbjct: 406 E 406
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 129/278 (46%), Gaps = 12/278 (4%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHT-NNVPLDTYALCSTLTASSRVNDVNFGKQI 129
N + +N++I + R AL A M + ++ + ++ S+L A +R+ D++ K +
Sbjct: 128 NVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWV 187
Query: 130 HAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLW 189
H+ + G + + SALVD+Y+K + + VF + + NA+++G+ GL
Sbjct: 188 HSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLA 247
Query: 190 AQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQS 249
+ + + +M + D T L C+ +E G++ + R I+ +
Sbjct: 248 TEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR-RFSIQPKLEHYG 306
Query: 250 SLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
+++++ G+ G VK+A ++ + +E DVV+W S+L R K E+ ++ +
Sbjct: 307 AMVDLLGRAGRVKEAYELIESMPIEP------DVVIWRSLLSS-SRTYKNPELGEIAIQN 359
Query: 310 LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNE 347
L + D + + S+ T + + K E MS E
Sbjct: 360 LSKAKSGDYVLLSNIYSS---TKKWESAQKVRELMSKE 394
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 176/361 (48%), Gaps = 12/361 (3%)
Query: 16 KNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHF 75
K L K++H ++L++ +H+ LI Y C + + F N + +
Sbjct: 330 KALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKC---GDMASGRRVFYGSKQRNAISW 386
Query: 76 NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
++S + G AL + +M D + + L + + + GK+IH + K
Sbjct: 387 TALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALK 446
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLEL 195
+ +V + ++L+ +YSK + +FD + ++N A++ Y E G+E+
Sbjct: 447 NLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEV 506
Query: 196 VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
R M + + + D T+ L C+ L A++LG++LH ++L+ + ES F+ + +I+MY
Sbjct: 507 FRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILK--KEFESIPFVSARIIKMY 564
Query: 256 GKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIR 315
GKCG ++ A F D V + + WT+++ YG N +++ I+ F++M+ G
Sbjct: 565 GKCGDLRSAN--FSFDAVAVKGS-----LTWTAIIEAYGCNELFRDAINCFEQMVSRGFT 617
Query: 316 PDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWE 375
P+ F V+S C G V ++F M + L P EHYS +++LL R G +++A
Sbjct: 618 PNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEAQR 677
Query: 376 L 376
L
Sbjct: 678 L 678
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 164/344 (47%), Gaps = 17/344 (4%)
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
++S NP + I F R+ +ALT ++ +P++ + L A R + G
Sbjct: 71 LHSKNPYIIHRDIQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHG 130
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
KQ+H H+ G S+ F+ + LV +Y+ SVKDA VFDE N NALL G +
Sbjct: 131 KQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVIS 190
Query: 187 G--LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESD 244
G + L +M L + + ++LS ++ G SA+ G + H+ ++ + + +
Sbjct: 191 GKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIK--NGLFNS 248
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVID 304
VFL++SL++MY KCG V A++VF + VE RD+V+W +M+ N + E +
Sbjct: 249 VFLKTSLVDMYFKCGKVGLARRVFD-EIVE------RDIVVWGAMIAGLAHNKRQWEALG 301
Query: 305 LFKEML-EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
LF+ M+ EE I P+ + T++ G + G + + P +S L+DL
Sbjct: 302 LFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDL 361
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
C+ G++ + Y IS W AL++ G +
Sbjct: 362 YCKCGDMASG----RRVFYGSKQRNAIS-WTALMSGYAANGRFD 400
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 223/483 (46%), Gaps = 47/483 (9%)
Query: 15 TKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLH 74
+ +++ + ++H L+ +G F+ L+ + + ++ +++ + NP+
Sbjct: 32 SNSITHLFQVHARLITSGN-FWDSSWAIRLLKSSSRFGDSSYTVSIYRSIGKLYCANPVF 90
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
++S+ ++ F F + VP D+Y S ++ + V+ GK H
Sbjct: 91 KAYLVSSSPKQALGFY----FDILRFGFVP-DSYTFVSLISCIEKTCCVDSGKMCHGQAI 145
Query: 135 KLGWSSSVFVGSALVDLYS-------------------------------KLSSVKDAAL 163
K G + V ++L+ +Y+ + V A
Sbjct: 146 KHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHK 205
Query: 164 VFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSA 223
+FDE+P+KN + N ++S Y A + L R+M + ++ TL L AC +
Sbjct: 206 LFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSAR 265
Query: 224 VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDV 283
++ GR +H+ ++RT + S V + ++LI+MYGKC V A+++F D + RN+
Sbjct: 266 LKEGRSVHASLIRTF--LNSSVVIDTALIDMYGKCKEVGLARRIF--DSLSIRNK----- 316
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFES 343
V W M+ + +G+ + ++LF+ M+ +RPD + F+ V+ C G V G Y+
Sbjct: 317 VTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSL 376
Query: 344 MSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDC 403
M +EF++ P H C+ +L AG ++A E L + L + W LL++
Sbjct: 377 MVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEAL-KNLPDEDVTPESTKWANLLSSSRFT 435
Query: 404 GNIELGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSW 463
GN LG+ + +E DP N LL N+Y+ G W+++ +R ++KER + + GC
Sbjct: 436 GNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGL 495
Query: 464 VQV 466
V +
Sbjct: 496 VDL 498
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 194/394 (49%), Gaps = 25/394 (6%)
Query: 76 NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
N +I + + GF A+ F M DT + + + + SR + G +
Sbjct: 196 NCLIDMYGKCGFMDDAVLVFQHMEEK----DTVSWNAIVASCSRNGKLELGLWFFHQMP- 250
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLEL 195
+ + L+D + K +A V ++P N+ N +L+GY + + E
Sbjct: 251 ---NPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEF 307
Query: 196 VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
KM +++D+++LS L A L+ V G +H+ + ++S V + S+LI+MY
Sbjct: 308 FTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKL--GLDSRVVVASALIDMY 365
Query: 256 GKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG-I 314
KCG++K A+ +F +++++W M+ Y RNG E I LF ++ +E +
Sbjct: 366 SKCGMLKHAELMF-------WTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFL 418
Query: 315 RPDGIAFLTVISACGHTG-QVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
+PD FL +++ C H + + YFE M NE+++ P EH L+ + + GE+ +A
Sbjct: 419 KPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCSLIRAMGQRGEVWQA 478
Query: 374 WELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAG--ICILLS 431
+++ + G G ++ W ALL AC +++ K + +EL + + I++S
Sbjct: 479 KQVIQEF---GFGYDGVA-WRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMS 534
Query: 432 NLYARFGMWDEIGHLRVVIKERGLRKDVGCSWVQ 465
NLYA W E+G +R +++E G+ K+VG SW+
Sbjct: 535 NLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 158/340 (46%), Gaps = 32/340 (9%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
++ I+ R G + A ++ P D L L S V+ +Q+H +V
Sbjct: 24 WSTIVPALARFGSIGVLRAAVELINDGEKP-DASPLVHLLRVSGNYGYVSLCRQLHGYVT 82
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
K G+ S+ + ++L+ Y S++DA VFDE+P+ + + N+L+SGY ++G + +G+
Sbjct: 83 KHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGIC 142
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
L ++ + ++F+ +AAL AC L LG +HS +++ + + +V + + LI+M
Sbjct: 143 LFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLE-KGNVVVGNCLIDM 201
Query: 255 YGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGI 314
YGKCG + A VF+ + +D V W +++ RNGK + + F +M
Sbjct: 202 YGKCGFMDDAVLVFQ-------HMEEKDTVSWNAIVASCSRNGKLELGLWFFHQM----P 250
Query: 315 RPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAW 374
PD + + +I A +G + + M NP ++ ++ + + +A
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQVLSDMP-----NPNSSSWNTILTGYVNSEKSGEAT 305
Query: 375 ELLNQTLYKGMGNCTISM--------------WGALLNAC 400
E + G+ S+ WG+L++AC
Sbjct: 306 EFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHAC 345
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 141/323 (43%), Gaps = 49/323 (15%)
Query: 34 LFFLHDL-------HTNLIAAYATCLP-KNHLQTLHNFFKCMNSTNPLHFNVIISNFCRK 85
L+F H + + LI A+ N Q L + M + N +N I++ +
Sbjct: 243 LWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSD----MPNPNSSSWNTILTGYVNS 298
Query: 86 GFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVG 145
A F+ MH++ V D Y+L L A + + V +G IHA KLG S V V
Sbjct: 299 EKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVA 358
Query: 146 SALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR-L 204
SAL+D+YSK +K A L+F +P KN + N ++SGY G + ++L ++ R L
Sbjct: 359 SALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFL 418
Query: 205 KYDQFTLSAALRACTGLSA---VELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
K D+FT L C+ V LG + ++ + I+ V SLI G+ G V
Sbjct: 419 KPDRFTFLNLLAVCSHCEVPMEVMLG---YFEMMINEYRIKPSVEHCCSLIRAMGQRGEV 475
Query: 262 KKAQQV-----FKLDGVESR-------------------------NERSRDVVLWTSMLG 291
+A+QV F DGV R + +D L+ M
Sbjct: 476 WQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSN 535
Query: 292 VYGRNGKYKEVIDLFKEMLEEGI 314
+Y + +++EV + K M E G+
Sbjct: 536 LYAYHERWREVGQIRKIMRESGV 558
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 189/462 (40%), Gaps = 70/462 (15%)
Query: 8 FLHQCHVTKN---LSAIKKLHGNLLRTGTLFFLHD--LHTNLIAAYATCLPKNHLQTLHN 62
+H V+ N +S ++LHG + + G F+ + L +L+ Y T + L+ H
Sbjct: 58 LVHLLRVSGNYGYVSLCRQLHGYVTKHG---FVSNTRLSNSLMRFYKT---SDSLEDAHK 111
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F M + + +N ++S + + G + F +H ++V + ++ + L A +R++
Sbjct: 112 VFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHL 171
Query: 123 VNFGKQIHAHVGKLGWSS-SVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
G IH+ + KLG +V VG+ L+D+Y K + DA LVF + EK+TV NA+++
Sbjct: 172 SPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVA 231
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
G GL +MP
Sbjct: 232 SCSRNGKLELGLWFFHQMP----------------------------------------- 250
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
D + LI+ + K G A QV L + + N S W ++L Y + K E
Sbjct: 251 NPDTVTYNELIDAFVKSGDFNNAFQV--LSDMPNPNSSS-----WNTILTGYVNSEKSGE 303
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
+ F +M G+R D + L+++ A V + +++ L+ S L+
Sbjct: 304 ATEFFTKMHSSGVRFDEYS-LSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALI 362
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGN-IELGKLAGQRALE-- 418
D+ + G L+ A + ++ M + +W +++ G+ IE KL Q E
Sbjct: 363 DMYSKCGMLKHA-----ELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERF 417
Query: 419 LDPHNAGICILLSNL-YARFGMWDEIGHLRVVIKERGLRKDV 459
L P LL+ + M +G+ ++I E ++ V
Sbjct: 418 LKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSV 459
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 195/406 (48%), Gaps = 55/406 (13%)
Query: 8 FLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDL-HTNLIAAYATCLPKNHLQTLHN--FF 64
FL C N S +K++H +++ H+L + L+ + + +T + F
Sbjct: 26 FLRTC---SNFSQLKQIHTKIIK-------HNLTNDQLLVRQLISVSSSFGETQYASLVF 75
Query: 65 KCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMH-TNNVPLDTYALCSTLTASSRVNDV 123
+ S + +N++I + P AL F M ++ D + + A + +
Sbjct: 76 NQLQSPSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSI 135
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKL---------------------------- 155
G Q+H K G+ + VF + L+DLY K
Sbjct: 136 RLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGL 195
Query: 156 ---SSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLS 212
S + A +VF+++P +N V A+++ Y + + +L R+M V +K ++FT+
Sbjct: 196 VSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIV 255
Query: 213 AALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDG 272
L+A T L ++ +GR +H Y + + D FL ++LI+MY KCG ++ A++VF +
Sbjct: 256 NLLQASTQLGSLSMGRWVHDYAHKNGFVL--DCFLGTALIDMYSKCGSLQDARKVFDV-- 311
Query: 273 VESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG-IRPDGIAFLTVISACGHT 331
+ + + W SM+ G +G +E + LF+EM EE + PD I F+ V+SAC +T
Sbjct: 312 -----MQGKSLATWNSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANT 366
Query: 332 GQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELL 377
G V G++YF M + ++P EH +C++ LL +A E++KA L+
Sbjct: 367 GNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNLV 412
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 168/331 (50%), Gaps = 18/331 (5%)
Query: 141 SVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMP 200
+ FV S ++ Y ++ V +A +F + ++ V N L++GY + G ++ M
Sbjct: 207 NAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQ 266
Query: 201 VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGL 260
+ D T+S+ L AC +++GR++HS + IE + F+ ++LI+MY KCG
Sbjct: 267 GEGYEPDAVTVSSILSACAQSGRLDVGREVHSLI--NHRGIELNQFVSNALIDMYAKCGD 324
Query: 261 VKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIA 320
++ A VF+ V R V SM+ +GK KE +++F M ++PD I
Sbjct: 325 LENATSVFESISV-------RSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEIT 377
Query: 321 FLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQT 380
F+ V++AC H G + G+K F M + + P +H+ CL+ LL R+G+L++A+ L+ +
Sbjct: 378 FIAVLTACVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEM 436
Query: 381 LYKGMGNCTISMWGALLNACVDCGNIELG----KLAGQRALELDPHNAGICILLSNLYAR 436
K N T+ GALL AC + E+ K+ + ++ +SNLYA
Sbjct: 437 HVK--PNDTV--LGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENHLASISNLYAH 492
Query: 437 FGMWDEIGHLRVVIKERGLRKDVGCSWVQVT 467
W LRV +++RGL K G S + +T
Sbjct: 493 TERWQTAEALRVEMEKRGLEKSPGLSSLVLT 523
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 163/375 (43%), Gaps = 44/375 (11%)
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
S H + +I N +G P AL + + V + + V V GK
Sbjct: 8 SLGEFHVSNLIKNHISRGSPIQALVLYGGIRRRGVYFPGWVPLILRACACVVPRVVLGKL 67
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAG- 187
+H+ K G S V VGS+L+ +Y K V A VFDE+PE+N NA++ GY G
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGD 127
Query: 188 -LWAQGL--------------ELVR------KMPVLRLKYDQFTLS-AALRACTGLSAVE 225
+ A GL E+++ ++ R +++ ++A + + V
Sbjct: 128 AVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVY 187
Query: 226 LGRQLHSYVLRTTHDI-ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVV 284
+ + + DI E + F+ S ++ Y + G V +A+ +F +RD+V
Sbjct: 188 VNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIF-------YRVFARDLV 240
Query: 285 LWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
+W +++ Y +NG + ID F M EG PD + +++SAC +G++ G + S+
Sbjct: 241 IWNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVG-REVHSL 299
Query: 345 SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCG 404
N + + L+D+ + G+L+ A + + + C N+ + C
Sbjct: 300 INHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACC---------NSMISCL 350
Query: 405 NIELGKLAGQRALEL 419
I GK G+ ALE+
Sbjct: 351 AIH-GK--GKEALEM 362
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 2/195 (1%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N +I+ + + G+ A+ AF M D + S L+A ++ ++ G+++H+ +
Sbjct: 242 WNTLIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLIN 301
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLE 194
G + FV +AL+D+Y+K +++A VF+ I ++ C N+++S G + LE
Sbjct: 302 HRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALE 361
Query: 195 LVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEM 254
+ M L LK D+ T A L AC + G ++ S + T D++ +V LI +
Sbjct: 362 MFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM--KTQDVKPNVKHFGCLIHL 419
Query: 255 YGKCGLVKKAQQVFK 269
G+ G +K+A ++ K
Sbjct: 420 LGRSGKLKEAYRLVK 434
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 195/415 (46%), Gaps = 54/415 (13%)
Query: 18 LSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFNV 77
LS +++HG L++ G + L LI YA C +L+ F + N + +N
Sbjct: 332 LSCGRQIHGMLIKNGCETGIV-LGNALIDFYAKC---GNLEDSRLCFDYIRDKNIVCWNA 387
Query: 78 IISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLG 137
++S + K P + L+ F M Y ST S V ++ +Q+H+ + ++G
Sbjct: 388 LLSGYANKDGP-ICLSLFLQMLQMGFRPTEYTF-STALKSCCVTEL---QQLHSVIVRMG 442
Query: 138 WSSSVFVGSALVDLYSKLSSVKDAALVFD------------------------------- 166
+ + +V S+L+ Y+K + DA L+ D
Sbjct: 443 YEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLI 502
Query: 167 -EIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVE 225
+ + +TV N ++ + + +EL + M ++ D++T + L C+ L +
Sbjct: 503 STLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLT 562
Query: 226 LGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVL 285
LG +H + +T +D F+ + LI+MYGKCG ++ +VF+ R ++++
Sbjct: 563 LGSSIHGLITKTDFSC-ADTFVCNVLIDMYGKCGSIRSVMKVFE-------ETREKNLIT 614
Query: 286 WTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMS 345
WT+++ G +G +E ++ FKE L G +PD ++F+++++AC H G V G+ F+ M
Sbjct: 615 WTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM- 673
Query: 346 NEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNAC 400
++ + P +HY C VDLL R G L++A L+ + + +W L+ C
Sbjct: 674 KDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPA----DAPVWRTFLDGC 724
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 192/428 (44%), Gaps = 55/428 (12%)
Query: 3 NSIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHN 62
+S + L K+L K+LH + + G L + +LI+AY C +
Sbjct: 216 SSFLGVLKGVSCVKDLDISKQLHCSATKKG-LDCEISVVNSLISAYGKC---GNTHMAER 271
Query: 63 FFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND 122
F+ S + + +N II + P AL F M + + S L SS V
Sbjct: 272 MFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQL 331
Query: 123 VNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSG 182
++ G+QIH + K G + + +G+AL+D Y+K +++D+ L FD I +KN VC NALLSG
Sbjct: 332 LSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSG 391
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE 242
Y L L +M + + ++T S AL++C EL +QLHS ++R + E
Sbjct: 392 YANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCC---VTEL-QQLHSVIVRMGY--E 444
Query: 243 SDVFLQSSLIEMYGKCGLVKKA----------QQVFKLD---GVESRNER---------- 279
+ ++ SSL+ Y K L+ A V L+ G+ SR +
Sbjct: 445 DNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLIST 504
Query: 280 --SRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
D V W + R+ ++EVI+LFK ML+ IRPD F++++S C + G
Sbjct: 505 LEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLG 564
Query: 338 -------VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTI 390
K S ++ F N L+D+ + G ++ ++ +T K +
Sbjct: 565 SSIHGLITKTDFSCADTFVCN-------VLIDMYGKCGSIRSVMKVFEETREK-----NL 612
Query: 391 SMWGALLN 398
W AL++
Sbjct: 613 ITWTALIS 620
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 148/344 (43%), Gaps = 15/344 (4%)
Query: 17 NLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNSTNPLHFN 76
++ A +LHG L+ G + T L+ Y + L+ F+ M + +N
Sbjct: 128 DVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRL---DLLEMAEQVFEDMPFKSLETWN 184
Query: 77 VIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKL 136
++S +GF + F + L + L S V D++ KQ+H K
Sbjct: 185 HMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKK 244
Query: 137 GWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELV 196
G + V ++L+ Y K + A +F + + V NA++ ++ + L+L
Sbjct: 245 GLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLF 304
Query: 197 RKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYG 256
MP +Q T + L + + + GRQ+H +++ + E+ + L ++LI+ Y
Sbjct: 305 VSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIK--NGCETGIVLGNALIDFYA 362
Query: 257 KCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRP 316
KCG ++ ++ F R +++V W ++L Y N + LF +ML+ G RP
Sbjct: 363 KCGNLEDSRLCFDYI-------RDKNIVCWNALLSGYA-NKDGPICLSLFLQMLQMGFRP 414
Query: 317 DGIAFLTVISACGHT--GQVHAGVKYFESMSNEFKLNPGPEHYS 358
F T + +C T Q+H+ + N++ L+ Y+
Sbjct: 415 TEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 129/288 (44%), Gaps = 49/288 (17%)
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPV 201
V+V + ++ LY KL V A VFD++PE+N V N ++ GY + G + + +M
Sbjct: 49 VYVCNNIISLYEKLGEVSLAGKVFDQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRY 108
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
+Q T+S L +C L V G QLH L+ +D F+ + L+ +YG+ L+
Sbjct: 109 FGYLPNQSTVSGLL-SCASLD-VRAGTQLHGLSLKYGL-FMADAFVGTCLLCLYGRLDLL 165
Query: 262 KKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAF 321
+ A+QVF+ + + + W M+ + G G KE + F+E++ G +F
Sbjct: 166 EMAEQVFE-------DMPFKSLETWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSF 218
Query: 322 LTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTL 381
L V+ GV SC+ DL ++ K +L
Sbjct: 219 LGVLK----------GV-------------------SCVKDL-----DISK--QLHCSAT 242
Query: 382 YKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELD--PHNAGIC 427
KG+ +C IS+ +L++A CGN + + Q A D NA IC
Sbjct: 243 KKGL-DCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIIC 289
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 116/468 (24%), Positives = 217/468 (46%), Gaps = 57/468 (12%)
Query: 4 SIIQFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDL--HTNLIAAYATCLPKNHLQTLH 61
+I+ + C K ++ ++H ++ G F+ D+ +L+ Y+ C L+
Sbjct: 354 TIMSAVSACSCLKVINQGSEVHSIAVKMG---FIDDVLVGNSLVDMYSKC---GKLEDAR 407
Query: 62 NFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVN 121
F + + + +N +I+ +C+ G+ A F+ M N+ R N
Sbjct: 408 KVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANL---------------RPN 452
Query: 122 DVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLS 181
+ + I G+ + G A+ DL+ ++ KD + ++NT N +++
Sbjct: 453 IITWNTMIS------GYIKNGDEGEAM-DLFQRME--KDGKV------QRNTATWNLIIA 497
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
GY + G + LEL RKM R + T+ + L AC L ++ R++H VLR D
Sbjct: 498 GYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRNLDA 557
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
V +++L + Y K G ++ ++ +F G+E++ D++ W S++G Y +G Y
Sbjct: 558 IHAV--KNALTDTYAKSGDIEYSRTIFL--GMETK-----DIITWNSLIGGYVLHGSYGP 608
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
+ LF +M +GI P+ ++I A G G V G K F S++N++ + P EH S +V
Sbjct: 609 ALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMV 668
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDP 421
L RA L++A + + + + +W + L C G+I++ A + L+P
Sbjct: 669 YLYGRANRLEEALQFIQEMNIQS----ETPIWESFLTGCRIHGDIDMAIHAAENLFSLEP 724
Query: 422 HNAGICILLSNLY---ARFGMWDEIGHLRVVIKERGLRKDVGCSWVQV 466
N ++S +Y A+ G E R ++ L+K +G SW++V
Sbjct: 725 ENTATESIVSQIYALGAKLGRSLEGNKPR---RDNLLKKPLGQSWIEV 769
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 147/321 (45%), Gaps = 16/321 (4%)
Query: 82 FCRKGFPFLALTAFS--FMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWS 139
CR G A A F + V TY L + ++ G+ +HA G L
Sbjct: 56 LCRNGSLLEAEKALDSLFQQGSKVKRSTY--LKLLESCIDSGSIHLGRILHARFG-LFTE 112
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
VFV + L+ +Y+K + DA VFD + E+N +A++ Y W + +L R M
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRERNLFTWSAMIGAYSRENRWREVAKLFRLM 172
Query: 200 PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG 259
+ D F L+ C VE G+ +HS V++ + S + + +S++ +Y KCG
Sbjct: 173 MKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKL--GMSSCLRVSNSILAVYAKCG 230
Query: 260 LVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGI 319
+ A + F R R RDV+ W S+L Y +NGK++E ++L KEM +EGI P +
Sbjct: 231 ELDFATKFF-------RRMRERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 320 AFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQ 379
+ +I G+ A + + M F + ++ ++ L G +A ++ +
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMET-FGITADVFTWTAMISGLIHNGMRYQALDMFRK 342
Query: 380 TLYKGMGNCTISMWGALLNAC 400
G+ +++ A ++AC
Sbjct: 343 MFLAGVVPNAVTIMSA-VSAC 362
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 177/401 (44%), Gaps = 55/401 (13%)
Query: 7 QFLHQCHVTKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKC 66
+ L C ++ A K +H +++ G L + +++A YA C L FF+
Sbjct: 186 KILQGCANCGDVEAGKVIHSVVIKLGMSSCLR-VSNSILAVYAKC---GELDFATKFFRR 241
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
M + + +N ++ +C+ G H V
Sbjct: 242 MRERDVIAWNSVLLAYCQNG-----------KHEEAV----------------------- 267
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCAN-----ALLS 181
++ + K G S + + L+ Y++L DAA+ + E + A+ A++S
Sbjct: 268 -ELVKEMEKEGISPGLVTWNILIGGYNQLGKC-DAAMDLMQKMETFGITADVFTWTAMIS 325
Query: 182 GYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDI 241
G G+ Q L++ RKM + + + T+ +A+ AC+ L + G ++HS ++
Sbjct: 326 GLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKM--GF 383
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
DV + +SL++MY KCG ++ A++VF D V +++DV W SM+ Y + G +
Sbjct: 384 IDDVLVGNSLVDMYSKCGKLEDARKVF--DSV-----KNKDVYTWNSMITGYCQAGYCGK 436
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
+LF M + +RP+ I + T+IS G + F+ M + K+ ++ ++
Sbjct: 437 AYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLII 496
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVD 402
+ G+ +A EL + + ++++ +LL AC +
Sbjct: 497 AGYIQNGKKDEALELFRKMQFSRFMPNSVTIL-SLLPACAN 536
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 157/323 (48%), Gaps = 20/323 (6%)
Query: 44 LIAAYA-TCLPKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNN 102
+++ YA ++ L+ ++ + N + ++IS + P L + +
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR 294
Query: 103 VPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAA 162
V L+ + + L ++ D+ ++I +LG ++ +A++ Y+++ + A
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIF---NELGTQRNLVTWNAMISGYTRIGDMSSAR 351
Query: 163 LVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKM-PVLRLKYDQFTLSAALRACTGL 221
+FD +P++N V N+L++GY G A +E M K D+ T+ + L AC +
Sbjct: 352 QLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHM 411
Query: 222 SAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR 281
+ +ELG + Y+ + + + SLI MY + G + +A++VF + R
Sbjct: 412 ADLELGDCIVDYIRKNQIKLNDSGY--RSLIFMYARGGNLWEAKRVFD-------EMKER 462
Query: 282 DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYF 341
DVV + ++ + NG E ++L +M +EGI PD + + +V++AC G + G + F
Sbjct: 463 DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF 522
Query: 342 ESMSNEFKLNPGPEHYSCLVDLL 364
+S+ NP +HY+C+ DLL
Sbjct: 523 KSIR-----NPLADHYACM-DLL 539
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/367 (24%), Positives = 162/367 (44%), Gaps = 59/367 (16%)
Query: 65 KCMNSTNPLHFNVIISNFCRKGFPFLALTA----FSFMHTNNVPLDTYALCSTLTASSRV 120
+C + F V+I + R G F AL F + NV +D Y ++ ++ +V
Sbjct: 99 RCGIMPDAFSFPVVIKSAGRFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKV 158
Query: 121 ND-VNFGKQIHAHV---GKLGW--------------SSSVFVGSALVDLYSKLSSVKDAA 162
D ++ K +V G W + V + ++ ++K+ +++A
Sbjct: 159 FDQISQRKGSDWNVMISGYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLENAR 218
Query: 163 LVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLS 222
FD +PEK+ V NA+LSGY + G L L M L ++ ++ T + AC+ +
Sbjct: 219 KYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRA 278
Query: 223 AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRN----- 277
L R L + + + F++++L++M+ KC ++ A+++F G + RN
Sbjct: 279 DPSLTRSLVKLI--DEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQ-RNLVTWN 335
Query: 278 ---------------------ERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG-IR 315
R+VV W S++ Y NG+ I+ F++M++ G +
Sbjct: 336 AMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSK 395
Query: 316 PDGIAFLTVISACGHTGQVHAG---VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQK 372
PD + ++V+SACGH + G V Y N+ KLN Y L+ + R G L +
Sbjct: 396 PDEVTMISVLSACGHMADLELGDCIVDYIR--KNQIKLNDS--GYRSLIFMYARGGNLWE 451
Query: 373 AWELLNQ 379
A + ++
Sbjct: 452 AKRVFDE 458
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 160/352 (45%), Gaps = 26/352 (7%)
Query: 41 HTNLIAAYATCLPKNHLQTLHNFFKCMNST--NP--LHFNVIISNFCRKGFPFLALTAF- 95
+T+LI+A+A + N FK M P + +NVI++ F + G P+ +T+
Sbjct: 211 YTSLISAFANS---GRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267
Query: 96 SFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKL 155
M ++ + D Y + +T R + Q+ + G+S +AL+D+Y K
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 156 SSVKDAALVFDEIP----EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFT- 210
K+A V +E+ + V N+L+S Y G+ + +EL +M K D FT
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 211 ---LSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQV 267
LS RA SA+ + ++ + + ++ ++ I+MYG G + ++
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRN------AGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
Query: 268 FKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISA 327
F V S D+V W ++L V+G+NG EV +FKEM G P+ F T+ISA
Sbjct: 442 FDEINVCGL---SPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 328 CGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQ 379
G + + M + + P Y+ ++ L R G +++ ++L +
Sbjct: 499 YSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 142/324 (43%), Gaps = 31/324 (9%)
Query: 90 LALTAFS-FMHTNNVP--LDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGS 146
LAL AF FM + LD + ++ + V+ + + + G+S V+ +
Sbjct: 153 LALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYT 212
Query: 147 ALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAGL-WAQGLELVRKMPV 201
+L+ ++ ++A VF ++ E + N +L+ +G+ G W + LV KM
Sbjct: 213 SLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES-----DVFLQSSLIEMYG 256
+ D +T + + C S LH + ++++ D ++L+++YG
Sbjct: 273 DGIAPDAYTYNTLITCCKRGS-------LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYG 325
Query: 257 KCGLVKKAQQVFK---LDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
K K+A +V L+G S +V + S++ Y R+G E ++L +M E+G
Sbjct: 326 KSHRPKEAMKVLNEMVLNGF------SPSIVTYNSLISAYARDGMLDEAMELKNQMAEKG 379
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
+PD + T++S G+V + + FE M N P ++ + + G+ +
Sbjct: 380 TKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 374 WELLNQTLYKGMGNCTISMWGALL 397
++ ++ G+ + I W LL
Sbjct: 439 MKIFDEINVCGL-SPDIVTWNTLL 461
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 100/214 (46%), Gaps = 13/214 (6%)
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML 310
+I M GK G V A +F +G++ + S DV +TS++ + +G+Y+E +++FK+M
Sbjct: 179 IISMLGKEGRVSSAANMF--NGLQ-EDGFSLDVYSYTSLISAFANSGRYREAVNVFKKME 235
Query: 311 EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGEL 370
E+G +P I + +++ G G + + P Y+ L+ C+ G L
Sbjct: 236 EDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSL 294
Query: 371 -QKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICIL 429
Q+A ++ + G ++ + ALL+ G K A + E+ + I+
Sbjct: 295 HQEAAQVFEEMKAAGFSYDKVT-YNALLDVY---GKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 430 LSN----LYARFGMWDEIGHLRVVIKERGLRKDV 459
N YAR GM DE L+ + E+G + DV
Sbjct: 351 TYNSLISAYARDGMLDEAMELKNQMAEKGTKPDV 384
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 97/244 (39%), Gaps = 52/244 (21%)
Query: 146 SALVDLYSKLSSVKDAALVFDEI------PEKNTVCANALLSGYGEAGLWAQGLELVRKM 199
+ L+ YS+ S + A V+ + P+ +T N +L+ G+W Q +++ +M
Sbjct: 493 NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY--NTVLAALARGGMWEQSEKVLAEM 550
Query: 200 PVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCG 259
R K ++ T + L A + L L V IE L +L+ + KC
Sbjct: 551 EDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV--IEPRAVLLKTLVLVCSKCD 608
Query: 260 LVKKAQQVFKLDGVESRNER--SRDVVLWTSMLGVYGRN---GKYKEVID---------- 304
L+ +A++ F ER S D+ SM+ +YGR K V+D
Sbjct: 609 LLPEAERAFS-----ELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPS 663
Query: 305 ----------------------LFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFE 342
+ +E+L +GI+PD I++ TVI A ++ + F
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 343 SMSN 346
M N
Sbjct: 724 EMRN 727
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 116/241 (48%), Gaps = 21/241 (8%)
Query: 188 LWAQGLELVRK--MPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
L+ +EL+ K MP D+ +C L ++E +++H + L++ D
Sbjct: 220 LYKDAIELLDKGAMP------DRECFVLLFESCANLKSLEHSKKVHDHFLQSK--FRGDP 271
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
L + +I M+G+C + A++VF + +D+ W M+ Y NG + + L
Sbjct: 272 KLNNMVISMFGECSSITDAKRVFD-------HMVDKDMDSWHLMMCAYSDNGMGDDALHL 324
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLC 365
F+EM + G++P+ FLTV AC G + +F+SM NE ++P EHY ++ +L
Sbjct: 325 FEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLG 384
Query: 366 RAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAG 425
+ G L +A + + ++ T W A+ N G+I+L + +++DP A
Sbjct: 385 KCGHLVEAEQYIRDLPFEP----TADFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAV 440
Query: 426 I 426
I
Sbjct: 441 I 441
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 1/143 (0%)
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEA 186
K++H H + + + + ++ ++ + SS+ DA VFD + +K+ + ++ Y +
Sbjct: 256 KKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDN 315
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
G+ L L +M LK ++ T AC + +E LH ++ H I
Sbjct: 316 GMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAF-LHFDSMKNEHGISPKTE 374
Query: 247 LQSSLIEMYGKCGLVKKAQQVFK 269
++ + GKCG + +A+Q +
Sbjct: 375 HYLGVLGVLGKCGHLVEAEQYIR 397
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 116/233 (49%), Gaps = 13/233 (5%)
Query: 86 GFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGW--SSSVF 143
F F+++ S +P ++ L L A + + D GKQ+HA KLG+ +
Sbjct: 174 AFLFVSMLKHSQKGAFKIP--SWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSY 231
Query: 144 VGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR 203
+ +L+ Y + ++DA LV ++ NTV A ++ G + + + +M
Sbjct: 232 LSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHG 291
Query: 204 LKYDQFTLSAALRACTGLS-AVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVK 262
+K + S L+AC+ +S G+Q+H+ ++ ESD ++ LIEMYGK G VK
Sbjct: 292 IKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLG--FESDCLIRCRLIEMYGKYGKVK 349
Query: 263 KAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIR 315
A++VFK S++E S V W +M+ Y +NG Y E I L +M GI+
Sbjct: 350 DAEKVFK----SSKDETS--VSCWNAMVASYMQNGIYIEAIKLLYQMKATGIK 396
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 18/231 (7%)
Query: 117 SSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCA 176
S+R ND ++ H+ K ++ + L+ ++ + +FD +P ++
Sbjct: 98 SARENDQRGAHELQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSW 157
Query: 177 NALLSGYGEAGLWAQG----LELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHS 232
+ G E G + + +++ K + L L+AC + ELG+Q+H+
Sbjct: 158 AIVFLGCIEMGDYEDAAFLFVSMLKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHA 217
Query: 233 YVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGV 292
+ E D +L SLI YG+ ++ A V L + + N V W + +
Sbjct: 218 LCHKLGFIDEEDSYLSGSLIRFYGEFRCLEDANLV--LHQLSNAN-----TVAWAAKVTN 270
Query: 293 YGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISAC------GHTG-QVHA 336
R G+++EVI F EM GI+ + F V+ AC G +G QVHA
Sbjct: 271 DYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHA 321
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDV-NF 125
+++ N + + ++N R+G + F M + + + + L A S V+D
Sbjct: 256 LSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNHGIKKNVSVFSNVLKACSWVSDGGRS 315
Query: 126 GKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTV-CANALLSGYG 184
G+Q+HA+ KLG+ S + L+++Y K VKDA VF ++ +V C NA+++ Y
Sbjct: 316 GQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYM 375
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAA 214
+ G++ + ++L+ +M +K L+ A
Sbjct: 376 QNGIYIEAIKLLYQMKATGIKAHDTLLNEA 405
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 11/171 (6%)
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML 310
L+EMY CGL +A VF E +E++ + W ++ + +NG ++ ID+F
Sbjct: 295 LLEMYSNCGLANEAASVF-----EKMSEKNLET--WCIIIRCFAKNGFGEDAIDMFSRFK 347
Query: 311 EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGEL 370
EEG PDG F + ACG G V G+ +FESMS ++ + P E Y LV++ G L
Sbjct: 348 EEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALPGFL 407
Query: 371 QKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDP 421
+A E + + + + +W L+N GN+ELG + LDP
Sbjct: 408 DEALEFVERMPMEP----NVDVWETLMNLSRVHGNLELGDYCAEVVEFLDP 454
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 218 CTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRN 277
C A++ + +H ++ T+ SD+ +S+IEMY CG V+ A VF +
Sbjct: 191 CGDAQALQEAKVVHEFI--TSSVGISDISAYNSIIEMYSGCGSVEDALTVFN-------S 241
Query: 278 ERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAG 337
R++ W ++ + +NG+ ++ ID F +EG +PDG F + ACG G ++ G
Sbjct: 242 MPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG 301
Query: 338 VKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALL 397
+ +FESM E+ + P EHY LV +L G L +A + + +W L+
Sbjct: 302 LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESM------EPNVDLWETLM 355
Query: 398 NACVDCGNIELGKLAGQRALELD 420
N G++ LG +LD
Sbjct: 356 NLSRVHGDLILGDRCQDMVEQLD 378
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 166/377 (44%), Gaps = 26/377 (6%)
Query: 55 NHLQTL---HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALC 111
+HLQ + H+ + C N++++ FC+ P+LA + M D
Sbjct: 96 DHLQIMGVSHDLYTC---------NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFT 146
Query: 112 STLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIP-- 169
S + N + + + ++G V + + ++D K V A +FD++
Sbjct: 147 SLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENY 206
Query: 170 --EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELG 227
+ V +L++G +G W L+R M ++K D T +A + A
Sbjct: 207 GIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDA 266
Query: 228 RQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWT 287
+L++ ++R + I ++F +SLI + G V +A+Q+F L +E++ DVV +T
Sbjct: 267 EELYNEMIRMS--IAPNIFTYTSLINGFCMEGCVDEARQMFYL--METKGCFP-DVVAYT 321
Query: 288 SMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNE 347
S++ + + K + + +F EM ++G+ + I + T+I G G+ + + F M +
Sbjct: 322 SLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSR 381
Query: 348 FKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMW--GALLNACVDCGN 405
+ P Y+ L+ LC G+++KA + + M ++W LL+ G
Sbjct: 382 -GVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGK 440
Query: 406 IE--LGKLAGQRALELD 420
+E L R E+D
Sbjct: 441 LEKALMVFEDMRKREMD 457
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 120/284 (42%), Gaps = 16/284 (5%)
Query: 73 LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAH 132
+ FN +I F ++G A ++ M ++ + + S + V+ +Q+
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 133 VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGL 188
+ G V ++L++ + K V DA +F E+ +K NT+ L+ G+G+ G
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGK 367
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD-IESDVFL 247
E+ M + + T + L V+ + + + D + +++
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 248 QSSLIEMYGKC--GLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYG--RNGKYKEVI 303
+ L+ +G C G ++KA VF E +R D+ + T + + G + GK K +
Sbjct: 428 YNVLL--HGLCYNGKLEKALMVF-----EDMRKREMDIGIITYTIIIQGMCKAGKVKNAV 480
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNE 347
+LF + +G++P+ + + T+IS G H F M +
Sbjct: 481 NLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKED 524
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 23/239 (9%)
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
G W + +E++ + D L + C A+E R +H ++ DV
Sbjct: 98 GNWREAVEVLDYLENKGYAMDLIRLLGLAKLCGKPEALEAARVVHECIIALVS--PCDVG 155
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTS-----MLGVYGRNGKYKE 301
++++IEMY C V A +VF+ ++ W S M+ + NG +E
Sbjct: 156 ARNAIIEMYSGCCSVDDALKVFE------------EMPEWNSGTLCVMMRCFVNNGYGEE 203
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
IDLF EEG +P+G F V S C TG V G F++M E+ + P EHY +
Sbjct: 204 AIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVT 263
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELD 420
+L +G L +A + + + ++ +W L+N G++ELG + +LD
Sbjct: 264 KMLATSGHLDEALNFVERMPMEP----SVDVWETLMNLSRVHGDVELGDRCAELVEKLD 318
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 135/274 (49%), Gaps = 9/274 (3%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
++ +I++F ++G AL+ M + V D + + S R+ D + I + +
Sbjct: 193 YSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK 252
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAGLWA 190
+ G + + ++++++Y K ++A L+ E+ E NTV + LLS Y E +
Sbjct: 253 RSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFL 312
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+ L + +M + D T + + L V+ +L + LR DIE +V ++
Sbjct: 313 EALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF-WSLRKM-DIEPNVVSYNT 370
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML 310
++ +YG+ L +A +F+L R + ++VV + +M+ +YG+ ++++ +L +EM
Sbjct: 371 ILRVYGEAELFGEAIHLFRL---MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQ 427
Query: 311 EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
GI P+ I + T+IS G G++ F+ +
Sbjct: 428 SRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL 461
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 104/243 (42%), Gaps = 17/243 (6%)
Query: 125 FGKQIHAH--VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIP----EKNTVCANA 178
FG+ IH + + +V + ++ +Y K + A + E+ E N + +
Sbjct: 381 FGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYST 440
Query: 179 LLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTT 238
++S +G+AG + L +K+ ++ DQ + A + L + R
Sbjct: 441 IISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVG-------LMGHAKRLL 493
Query: 239 HDIE-SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNG 297
H+++ D + + I + K G ++A VF+ ES +D+ ++ M+ +Y RN
Sbjct: 494 HELKLPDNIPRETAITILAKAGRTEEATWVFR-QAFESGE--VKDISVFGCMINLYSRNQ 550
Query: 298 KYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY 357
+Y VI++F++M G PD V++A G + + M E + P H+
Sbjct: 551 RYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHF 610
Query: 358 SCL 360
L
Sbjct: 611 QML 613
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 216 RACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVES 275
+ C + A+E R +H + T D S ++IEMY C A VF + +
Sbjct: 120 KLCGEVEALEEARVVHDCI--TPLDARS----YHTVIEMYSGCRSTDDALNVF--NEMPK 171
Query: 276 RNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVH 335
RN + W +M+ +NG+ + ID+F +EEG +PD F V AC G ++
Sbjct: 172 RNSET-----WGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDIN 226
Query: 336 AGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGA 395
G+ +FESM ++ + E Y ++++L G L +A + + + + ++ MW
Sbjct: 227 EGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFVERMTVEP----SVEMWET 282
Query: 396 LLNACVDCGNIELGKLAGQRALELD 420
L+N C G +ELG + +LD
Sbjct: 283 LMNLCWVQGYLELGDRFAELIKKLD 307
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/388 (22%), Positives = 168/388 (43%), Gaps = 19/388 (4%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N++I+ CR +AL+ M D + S + + N V + + +
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWA 190
++G+ V + + ++D K+ V DA +FD + + V N+L++G +G W+
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
L+R M + + + T +A + +L+ + R ++ DVF +S
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC--VDPDVFTYNS 284
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML 310
LI G V +A+Q+ LD + ++ DVV + +++ + ++ + E LF+EM
Sbjct: 285 LINGLCMHGRVDEAKQM--LDLMVTKGCLP-DVVTYNTLINGFCKSKRVDEGTKLFREMA 341
Query: 311 EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGEL 370
+ G+ D I + T+I G+ A + F M + P YS L+ LC +
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR----PNIRTYSILLYGLCMNWRV 397
Query: 371 QKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALE---LDPHNAGIC 427
+KA L + + K I+ + +++ GN+E R+L L P
Sbjct: 398 EKALVLF-ENMQKSEIELDITTYNIVIHGMCKIGNVE-DAWDLFRSLSCKGLKPDVVSYT 455
Query: 428 ILLSNLYARFGMWDEIGHLRVVIKERGL 455
++S + R WD+ L ++E GL
Sbjct: 456 TMISG-FCRKRQWDKSDLLYRKMQEDGL 482
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 146/336 (43%), Gaps = 11/336 (3%)
Query: 76 NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
N+++ C P A M D S L N + + +
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILG 181
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEI----PEKNTVCANALLSGYGEAGLWAQ 191
+G+ +V + L+ K + A +F+++ N V NAL++G E G W
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 192 GLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSL 251
L+R M R++ + T +A + A + + ++L++ +++ + + DVF SL
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS--VYPDVFTYGSL 299
Query: 252 IEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLE 311
I GL+ +A+Q+F L RN + V++T+++ + ++ + ++ + +F EM +
Sbjct: 300 INGLCMYGLLDEARQMFYL---MERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ 356
Query: 312 EGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQ 371
+G+ + I + +I G+ + F MS+ + P Y+ L+D LC G+++
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR-RAPPDIRTYNVLLDGLCCNGKVE 415
Query: 372 KAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
KA + + M + I + ++ G +E
Sbjct: 416 KALMIFEYMRKREM-DINIVTYTIIIQGMCKLGKVE 450
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 104/262 (39%), Gaps = 9/262 (3%)
Query: 60 LHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSR 119
L + K N + F +I F + G A ++ M +V D + S +
Sbjct: 246 LRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCM 305
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVC 175
++ +Q+ + + G + + + L+ + K V+D +F E+ +K NT+
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT 365
Query: 176 ANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVL 235
L+ GY G E+ +M R D T + L VE + Y+
Sbjct: 366 YTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMR 425
Query: 236 RTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGR 295
+ E D+ + + I + G C L K + F L +V+ +T+M+ + R
Sbjct: 426 KR----EMDINIVTYTIIIQGMCKL-GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCR 480
Query: 296 NGKYKEVIDLFKEMLEEGIRPD 317
G E LFK+M E+G P+
Sbjct: 481 RGLIHEADSLFKKMKEDGFLPN 502
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 11/275 (4%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+ +++ F R+G A F + + + D Y + + + SR +I + +
Sbjct: 324 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 383
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANA----LLSGYGEAGLWA 190
+G + +VD Y + DA VF+E+ LLS Y +A
Sbjct: 384 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+ +V++M ++ D F L++ L L ++ + + +D+ +
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM--ENGPCTADISTYNI 501
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSR-DVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
LI +YGK G +++ +++F VE + + R DVV WTS +G Y R Y + +++F+EM
Sbjct: 502 LINIYGKAGFLERIEELF----VELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 557
Query: 310 LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
++ G PDG ++SAC QV +M
Sbjct: 558 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 592
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 104/233 (44%), Gaps = 16/233 (6%)
Query: 233 YVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKL---DGVESRNERSRDVVLWTSM 289
Y +H + ++ ++L+ + + GL +KA+++F+ DG+E DV ++ ++
Sbjct: 309 YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP------DVYVYNAL 362
Query: 290 LGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFK 349
+ Y R G ++F M G PD ++ ++ A G G FE M
Sbjct: 363 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM-KRLG 421
Query: 350 LNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNI-EL 408
+ P + + L+ +A ++ K ++ + G+ T + ++LN G ++
Sbjct: 422 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL-NSMLNLYGRLGQFTKM 480
Query: 409 GKLAGQRALELDPHNAGICI--LLSNLYARFGMWDEIGHLRVVIKERGLRKDV 459
K+ + +E P A I +L N+Y + G + I L V +KE+ R DV
Sbjct: 481 EKILAE--MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDV 531
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 121/275 (44%), Gaps = 11/275 (4%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+ +++ F R+G A F + + + D Y + + + SR +I + +
Sbjct: 302 YTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQ 361
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANA----LLSGYGEAGLWA 190
+G + +VD Y + DA VF+E+ LLS Y +A
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+ +V++M ++ D F L++ L L ++ + + +D+ +
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEM--ENGPCTADISTYNI 479
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSR-DVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
LI +YGK G +++ +++F VE + + R DVV WTS +G Y R Y + +++F+EM
Sbjct: 480 LINIYGKAGFLERIEELF----VELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEM 535
Query: 310 LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
++ G PDG ++SAC QV +M
Sbjct: 536 IDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM 570
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 106/237 (44%), Gaps = 17/237 (7%)
Query: 233 YVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKL---DGVESRNERSRDVVLWTSM 289
Y +H + ++ ++L+ + + GL +KA+++F+ DG+E DV ++ ++
Sbjct: 287 YCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEP------DVYVYNAL 340
Query: 290 LGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFK 349
+ Y R G ++F M G PD ++ ++ A G G FE M
Sbjct: 341 MESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM-KRLG 399
Query: 350 LNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNI-EL 408
+ P + + L+ +A ++ K ++ + G+ T + ++LN G ++
Sbjct: 400 IAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVL-NSMLNLYGRLGQFTKM 458
Query: 409 GKLAGQRALELDPHNAGICI--LLSNLYARFGMWDEIGHLRVVIKERGLRKDVGCSW 463
K+ + +E P A I +L N+Y + G + I L V +KE+ R DV +W
Sbjct: 459 EKILAE--MENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDV-VTW 512
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/319 (21%), Positives = 138/319 (43%), Gaps = 18/319 (5%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N I++ CR G LAL M NV D + + + + R ++ + +
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEME 255
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWA 190
G SSV ++LV K D AL+ ++ + N + N LL + + G
Sbjct: 256 TKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQ 315
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+ EL ++M + + T + + + + + ++R + D+ +S
Sbjct: 316 EANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR--NKCSPDIVTFTS 373
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSR----DVVLWTSMLGVYGRNGKYKEVIDLF 306
LI+ Y V +VF RN R + V ++ ++ + ++GK K +LF
Sbjct: 374 LIKGYCMVKRVDDGMKVF-------RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
+EM+ G+ PD + + ++ G++ ++ FE + K++ G Y+ +++ +C+
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS-KMDLGIVMYTTIIEGMCK 485
Query: 367 AGELQKAWELLNQTLYKGM 385
G+++ AW L KG+
Sbjct: 486 GGKVEDAWNLFCSLPCKGV 504
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/320 (19%), Positives = 144/320 (45%), Gaps = 12/320 (3%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
N + + V+++ C++G LAL + M + D + + + + V+ +
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEA 186
+ G +V S+L+ DA+ + ++ EK N V NAL+ + +
Sbjct: 284 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 343
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
G + + +L M + D FT ++ + ++ +Q+ +++ + D DV
Sbjct: 344 GKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV--SKDCFPDVV 401
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
++LI+ + K V+ ++F+ S D V +T+++ +G +F
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFR---EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMS-NEFKLNPGPEHYSCLVDLLC 365
K+M+ +G+ PD + + ++ + G++ ++ F+ M +E KL+ Y+ +++ +C
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD--IYIYTTMIEGMC 516
Query: 366 RAGELQKAWELLNQTLYKGM 385
+AG++ W+L KG+
Sbjct: 517 KAGKVDDGWDLFCSLSLKGV 536
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 128/274 (46%), Gaps = 11/274 (4%)
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWAQGLEL 195
+ V + + ++D K V DA +F E+ K N V ++L+S G W+ +L
Sbjct: 258 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 317
Query: 196 VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
+ M ++ + T +A + A +L+ +++ + I+ D+F +SL+ +
Sbjct: 318 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRS--IDPDIFTYNSLVNGF 375
Query: 256 GKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIR 315
+ KA+Q+F+ + DVV + +++ + ++ + ++ +LF+EM G+
Sbjct: 376 CMHDRLDKAKQMFEF---MVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 432
Query: 316 PDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWE 375
D + + T+I H G K F+ M ++ + P YS L+D LC G+L+KA E
Sbjct: 433 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALE 491
Query: 376 LLNQTLYKGMGNCTISMWGALLNACVDCGNIELG 409
+ + + K I ++ ++ G ++ G
Sbjct: 492 VFDY-MQKSEIKLDIYIYTTMIEGMCKAGKVDDG 524
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 139/328 (42%), Gaps = 24/328 (7%)
Query: 75 FNVIISNFCRKGFPFLALTAF-SFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHV 133
+N++I+ FCR+ LAL M P S +T SS +N GK+I V
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEP-------SIVTLSSLLNGYCHGKRISDAV 175
Query: 134 G------KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGY 183
++G+ + L+ + +A + D + ++ N V +++G
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 184 GEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIES 243
+ G L L+ KM +++ D + + + V+ L+ + T I
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD--DALNLFKEMETKGIRP 293
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
+V SSLI G A Q+ D +E + + ++V + +++ + + GK+ E
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLS-DMIEKK--INPNLVTFNALIDAFVKEGKFVEAE 350
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
L+ +M++ I PD + ++++ ++ + FE M ++ P Y+ L+
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK-DCFPDVVTYNTLIKG 409
Query: 364 LCRAGELQKAWELLNQTLYKGMGNCTIS 391
C++ ++ EL + ++G+ T++
Sbjct: 410 FCKSKRVEDGTELFREMSHRGLVGDTVT 437
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/332 (19%), Positives = 138/332 (41%), Gaps = 14/332 (4%)
Query: 56 HLQTLHNFFKCMNS----TNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALC 111
H+ N FK M + N + ++ +IS C G A S M + +
Sbjct: 275 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 334
Query: 112 STLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK 171
+ + A + ++++ + K +F ++LV+ + + A +F+ + K
Sbjct: 335 ALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSK 394
Query: 172 N----TVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELG 227
+ V N L+ G+ ++ G EL R+M L D T + ++ +
Sbjct: 395 DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 454
Query: 228 RQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWT 287
+++ ++ + + D+ S L++ G ++KA +VF ++E D+ ++T
Sbjct: 455 QKVFKQMV--SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY---MQKSEIKLDIYIYT 509
Query: 288 SMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNE 347
+M+ + GK + DLF + +G++P+ + + T+IS + + M +
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKED 569
Query: 348 FKLNPGPEHYSCLVDLLCRAGELQKAWELLNQ 379
L P Y+ L+ R G+ + EL+ +
Sbjct: 570 GPL-PNSGTYNTLIRAHLRDGDKAASAELIRE 600
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 137/311 (44%), Gaps = 16/311 (5%)
Query: 76 NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
+ +I+ C KG AL M D L + + + + +
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWAQ 191
+SV S ++D K S DA +F+E+ K + V ++L+ G G W
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 192 GLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSL 251
G +++R+M + D T SA + + ++L++ ++ T I D +SL
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI--TRGIAPDTITYNSL 356
Query: 252 IEMYGKCGLVKKAQQVFKL---DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
I+ + K + +A Q+F L G E D+V ++ ++ Y + + + + LF+E
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEP------DIVTYSILINSYCKAKRVDDGMRLFRE 410
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAG 368
+ +G+ P+ I + T++ +G+++A + F+ M + + P Y L+D LC G
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSR-GVPPSVVTYGILLDGLCDNG 469
Query: 369 ELQKAWELLNQ 379
EL KA E+ +
Sbjct: 470 ELNKALEIFEK 480
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 138/324 (42%), Gaps = 24/324 (7%)
Query: 72 PLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHA 131
P+ FN + S R L L M N + D Y + + R + F +
Sbjct: 70 PIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLG 129
Query: 132 HVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAG 187
KLG+ S LV+ + V +A + D + E + V + L++G G
Sbjct: 130 RAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKG 189
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAAL-RAC-TGLS--AVELGRQLHSYVLRTTHDIES 243
++ L L+ +M + D+ T L R C +G S A++L R++ +I++
Sbjct: 190 RVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE------RNIKA 243
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVF---KLDGVESRNERSRDVVLWTSMLGVYGRNGKYK 300
V S +I+ K G A +F ++ G+++ DVV ++S++G +GK+
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA------DVVTYSSLIGGLCNDGKWD 297
Query: 301 EVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL 360
+ + +EM+ I PD + F +I G++ + + M + P Y+ L
Sbjct: 298 DGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR-GIAPDTITYNSL 356
Query: 361 VDLLCRAGELQKAWELLNQTLYKG 384
+D C+ L +A ++ + + KG
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKG 380
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 112/276 (40%), Gaps = 13/276 (4%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
F+ +I F ++G A ++ M T + DT S + + N ++ Q+ +
Sbjct: 318 FSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMV 377
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWA 190
G + S L++ Y K V D +F EI K NT+ N L+ G+ ++G
Sbjct: 378 SKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLN 437
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGL-SAVELGRQLHSYVLRTTHDIESDVFLQS 249
EL ++M + T L GL EL + L + + + + +
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILL---DGLCDNGELNKALEIFEKMQKSRMTLGIGIYN 494
Query: 250 SLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
+I +G C K + L S DVV + M+G + G E LF++M
Sbjct: 495 III--HGMCN-ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKM 551
Query: 310 LEEGIRPDGIAFLTVISA-CGHTGQVHAGVKYFESM 344
E+G PD + +I A G +G + + V+ E M
Sbjct: 552 KEDGCTPDDFTYNILIRAHLGGSGLISS-VELIEEM 586
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 135/281 (48%), Gaps = 19/281 (6%)
Query: 137 GWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKN----TVCANALLSGYGEAGLWAQG 192
G+ +V+V + L++ + K ++ DA VFDEI +++ V N L++GY + G +G
Sbjct: 235 GFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEG 294
Query: 193 LELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLI 252
L +M R + D FT SA + A + ++ L + + I +DV ++LI
Sbjct: 295 FRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGL-IPNDVIF-TTLI 352
Query: 253 EMYGKCG---LVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
+ + G L+K++ Q G++ D+VL+ +++ + +NG ++ M
Sbjct: 353 HGHSRNGEIDLMKESYQKMLSKGLQP------DIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 310 LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMS-NEFKLNPGPEHYSCLVDLLCRAG 368
+ G+RPD I + T+I G V ++ + M N +L+ +S LV +C+ G
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELD--RVGFSALVCGMCKEG 464
Query: 369 ELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELG 409
+ A L + L G+ ++ + +++A G+ + G
Sbjct: 465 RVIDAERALREMLRAGIKPDDVT-YTMMMDAFCKKGDAQTG 504
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 141/321 (43%), Gaps = 10/321 (3%)
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
N + +NV+I C+K + A+ + ++ D C+ + +V + G +
Sbjct: 259 DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLE 318
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA----ALVFDEIPEKNTVCANALLSGYG 184
+ + L +S S S+LV+ K +++A V D N NAL+
Sbjct: 319 MMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC 378
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESD 244
+ + + L +M + L+ + T S + ++ ++ T ++
Sbjct: 379 KGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDT--GLKLS 436
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVID 304
V+ +SLI + K G + A+ F + + + E + VV +TS++G Y GK + +
Sbjct: 437 VYPYNSLINGHCKFGDISAAEG-FMAEMINKKLEPT--VVTYTSLMGGYCSKGKINKALR 493
Query: 305 LFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLL 364
L+ EM +GI P F T++S G + VK F M+ E+ + P Y+ +++
Sbjct: 494 LYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVKPNRVTYNVMIEGY 552
Query: 365 CRAGELQKAWELLNQTLYKGM 385
C G++ KA+E L + KG+
Sbjct: 553 CEEGDMSKAFEFLKEMTEKGI 573
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 136/327 (41%), Gaps = 61/327 (18%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVN--FG-- 126
N + + ++ FCR+G AL+ M V LD + S + D FG
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDA----ALVFDEIPEKNTVCANALLSG 182
K++H G + ++++D SK K+A L+ +E N V A+++G
Sbjct: 671 KEMHDR----GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACT-GLSAVELGRQLHSYVLRTTHDI 241
+AG + L KM + +Q T L T G ++ +LH+ +L+ +
Sbjct: 727 LCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK---GL 783
Query: 242 ESDVFLQSSLIEMYGKCGLVKKAQQVFKL---DGVESRNERSRDVVLWTSMLGVYGRNGK 298
++ + LI + + G +++A ++ DGV S D + +T+M+ R
Sbjct: 784 LANTATYNMLIRGFCRQGRIEEASELITRMIGDGV------SPDCITYTTMINELCRRND 837
Query: 299 YKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYS 358
K+ I+L+ M E+GIRPD +A+ T+I C
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGC------------------------------ 867
Query: 359 CLVDLLCRAGELQKAWELLNQTLYKGM 385
C AGE+ KA EL N+ L +G+
Sbjct: 868 ------CVAGEMGKATELRNEMLRQGL 888
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 141/323 (43%), Gaps = 15/323 (4%)
Query: 90 LALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALV 149
LA+ F+ M + + D Y + + + D++ K++ AH+ G ++ + L+
Sbjct: 210 LAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLI 269
Query: 150 DLYSKLSSVKDAALVFDEI------PEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLR 203
D K V +A + ++ P+ T C L+ G + + GLE++ +M LR
Sbjct: 270 DGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYC--TLVYGLCKVQEFEIGLEMMDEMLCLR 327
Query: 204 LKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKK 263
+ +S+ + +E L V+ + ++F+ ++LI+ K +
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVV--DFGVSPNLFVYNALIDSLCKGRKFHE 385
Query: 264 AQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLT 323
A+ +F D + R DV ++ ++ ++ R GK + EM++ G++ + +
Sbjct: 386 AELLF--DRMGKIGLRPNDVT-YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNS 442
Query: 324 VISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYK 383
+I+ G + A + M N+ KL P Y+ L+ C G++ KA L ++ K
Sbjct: 443 LINGHCKFGDISAAEGFMAEMINK-KLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGK 501
Query: 384 GMGNCTISMWGALLNACVDCGNI 406
G+ +I + LL+ G I
Sbjct: 502 GIAP-SIYTFTTLLSGLFRAGLI 523
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/361 (22%), Positives = 144/361 (39%), Gaps = 44/361 (12%)
Query: 81 NFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSS 140
N C K F N A+ STL R V K+I G+ +
Sbjct: 210 NECDKAVGFYEFAVKRERRKNEQGKLASAMISTL---GRYGKVTIAKRIFETAFAGGYGN 266
Query: 141 SVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAGL-WAQGLEL 195
+V+ SAL+ Y + ++A VF+ + E N V NA++ G+ G+ + Q +
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKF 326
Query: 196 VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
+M ++ D+ T ++ L C+ E R L + T IE DVF ++L++
Sbjct: 327 FDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEM--TNRRIEQDVFSYNTLLDAI 384
Query: 256 GKCGLVKKAQQVFK-----------------LDGVESRNERSR---------------DV 283
K G + A ++ +DG D
Sbjct: 385 CKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR 444
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFES 343
V + ++L +Y + G+ +E +D+ +EM GI+ D + + ++ G G+ K F
Sbjct: 445 VSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Query: 344 MSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDC 403
M E L P YS L+D + G ++A E+ + G+ + ++ AL++A
Sbjct: 505 MKREHVL-PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGL-RADVVLYSALIDALCKN 562
Query: 404 G 404
G
Sbjct: 563 G 563
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 134/293 (45%), Gaps = 13/293 (4%)
Query: 56 HLQTLHNFFKCM--NSTNP--LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALC 111
+ + FF M N P + FN +++ R G A F M + D ++
Sbjct: 319 EFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYN 378
Query: 112 STLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIP-- 169
+ L A + ++ +I A + +V S ++D ++K +A +F E+
Sbjct: 379 TLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYL 438
Query: 170 --EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELG 227
+ V N LLS Y + G + L+++R+M + +K D T +A L +
Sbjct: 439 GIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 228 RQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWT 287
+++ + + R + ++ S+LI+ Y K GL K+A ++F+ +S R+ DVVL++
Sbjct: 499 KKVFTEMKR--EHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR--EFKSAGLRA-DVVLYS 553
Query: 288 SMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKY 340
+++ +NG + L EM +EGI P+ + + ++I A G + + Y
Sbjct: 554 ALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADY 606
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 149/361 (41%), Gaps = 58/361 (16%)
Query: 93 TAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLY 152
TAF+ + N V YA + ++A R + + + G ++ +A++D
Sbjct: 258 TAFAGGYGNTV----YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDAC 313
Query: 153 SKLS-SVKDAALVFDEIP----EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYD 207
K K A FDE+ + + + N+LL+ GLW L +M R++ D
Sbjct: 314 GKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQD 373
Query: 208 QFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQV 267
F+ + L A ++L ++ + + I +V S++I+ + K G +A +
Sbjct: 374 VFSYNTLLDAICKGGQMDLAFEILAQM--PVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 268 F--------KLDGVE-----------SRNERS-------------RDVVLWTSMLGVYGR 295
F LD V R+E + +DVV + ++LG YG+
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 296 NGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFK---LNP 352
GKY EV +F EM E + P+ + + T+I G ++ F EFK L
Sbjct: 492 QGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFR----EFKSAGLRA 547
Query: 353 GPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMG------NCTISMWG--ALLNACVDCG 404
YS L+D LC+ G + A L+++ +G+ N I +G A ++ D
Sbjct: 548 DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYS 607
Query: 405 N 405
N
Sbjct: 608 N 608
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 9/199 (4%)
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
L S++I G+ G V A+++F+ V +++++ YGR+G ++E I +F
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFE---TAFAGGYGNTVYAFSALISAYGRSGLHEEAISVF 291
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGV-KYFESMSNEFKLNPGPEHYSCLVDLLC 365
M E G+RP+ + + VI ACG G V K+F+ M + P ++ L+ +
Sbjct: 292 NSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFNSLLAVCS 350
Query: 366 RAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELG--KLAGQRALELDPHN 423
R G + A L ++ + + S + LL+A G ++L LA + P+
Sbjct: 351 RGGLWEAARNLFDEMTNRRIEQDVFS-YNTLLDAICKGGQMDLAFEILAQMPVKRIMPNV 409
Query: 424 AGICILLSNLYARFGMWDE 442
++ +A+ G +DE
Sbjct: 410 VSYSTVIDG-FAKAGRFDE 427
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 141/358 (39%), Gaps = 40/358 (11%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
N + ++ +I F + G AL F M + LD + + L+ ++V I
Sbjct: 408 NVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEA 186
+ +G V +AL+ Y K + VF E+ + N + + L+ GY +
Sbjct: 468 REMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKG 527
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRAC--TGL--SAVELGRQLHSYVLRTTHDIE 242
GL+ + +E+ R+ L+ D SA + A GL SAV L ++ T I
Sbjct: 528 GLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM------TKEGIS 581
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQV-------FKLDGVESRNE-RSRDVVLWTSMLGVYG 294
+V +S+I+ +G+ + ++ F + + E V+ L
Sbjct: 582 PNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTES 641
Query: 295 RNGKYKE----------VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
N K+ ++++F++M + I+P+ + F +++AC E
Sbjct: 642 NNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASMLLE-- 699
Query: 345 SNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVD 402
E +L + Y + LL G+ + W L Q+L+ + S A NA D
Sbjct: 700 --ELRLFDN-KVYGVVHGLLM--GQRENVW-LQAQSLFDKVNEMDGSTASAFYNALTD 751
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 127/274 (46%), Gaps = 11/274 (4%)
Query: 140 SSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWAQGLEL 195
+ V + + ++D K V DA +F E+ K N V ++L+S G W+ +L
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 196 VRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMY 255
+ M ++ + T +A + A +LH +++ + I+ D+F +SLI +
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRS--IDPDIFTYNSLINGF 300
Query: 256 GKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIR 315
+ KA+Q+F+ + D+ + +++ + ++ + ++ +LF+EM G+
Sbjct: 301 CMHDRLDKAKQMFEF---MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 316 PDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWE 375
D + + T+I H G K F+ M ++ + P YS L+D LC G+L+KA E
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 376 LLNQTLYKGMGNCTISMWGALLNACVDCGNIELG 409
+ + + K I ++ ++ G ++ G
Sbjct: 417 VFDY-MQKSEIKLDIYIYTTMIEGMCKAGKVDDG 449
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/320 (19%), Positives = 143/320 (44%), Gaps = 12/320 (3%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
N + + V+++ C++G LA + M + D + + + + V+ +
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEA 186
+ G +V S+L+ DA+ + ++ EK N V NAL+ + +
Sbjct: 209 KEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKE 268
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
G + + +L M + D FT ++ + ++ +Q+ +++ + D D+
Sbjct: 269 GKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV--SKDCFPDLD 326
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
++LI+ + K V+ ++F+ S D V +T+++ +G +F
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFR---EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 383
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMS-NEFKLNPGPEHYSCLVDLLC 365
K+M+ +G+ PD + + ++ + G++ ++ F+ M +E KL+ Y+ +++ +C
Sbjct: 384 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI--YIYTTMIEGMC 441
Query: 366 RAGELQKAWELLNQTLYKGM 385
+AG++ W+L KG+
Sbjct: 442 KAGKVDDGWDLFCSLSLKGV 461
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 147/353 (41%), Gaps = 28/353 (7%)
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAF-SFMHTNNVPLDTYALCSTLTASSRVNDVNFGK 127
S N +N++I+ FCR+ LAL M P S +T SS +N GK
Sbjct: 42 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEP-------SIVTLSSLLNGYCHGK 94
Query: 128 QIHAHVG------KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCAN 177
+I V ++G+ + L+ + +A + D + ++ N V
Sbjct: 95 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYG 154
Query: 178 ALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRT 237
+++G + G L+ KM +++ D + + + V+ L+ +
Sbjct: 155 VVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD--DALNLFKEME 212
Query: 238 THDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNG 297
T I +V SSLI G A Q+ D +E + + ++V + +++ + + G
Sbjct: 213 TKGIRPNVVTYSSLISCLCSYGRWSDASQLLS-DMIEKK--INPNLVTFNALIDAFVKEG 269
Query: 298 KYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHY 357
K+ E L +M++ I PD + ++I+ ++ + FE M ++ P + Y
Sbjct: 270 KFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK-DCFPDLDTY 328
Query: 358 SCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACV---DCGNIE 407
+ L+ C++ ++ EL + ++G+ T++ + L+ DC N +
Sbjct: 329 NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT-YTTLIQGLFHDGDCDNAQ 380
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 138/334 (41%), Gaps = 18/334 (5%)
Query: 56 HLQTLHNFFKCMNS----TNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALC 111
H+ N FK M + N + ++ +IS C G A S M + +
Sbjct: 200 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 259
Query: 112 STLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVF------ 165
+ + A + +++H + K +F ++L++ + + A +F
Sbjct: 260 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 319
Query: 166 DEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVE 225
D P+ +T N L+ G+ ++ G EL R+M L D T + ++ +
Sbjct: 320 DCFPDLDTY--NTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 226 LGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVL 285
+++ ++ + + D+ S L++ G ++KA +VF ++E D+ +
Sbjct: 378 NAQKVFKQMV--SDGVPPDIMTYSILLDGLCNNGKLEKALEVFD---YMQKSEIKLDIYI 432
Query: 286 WTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMS 345
+T+M+ + GK + DLF + +G++P+ + + T+IS + + M
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 492
Query: 346 NEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQ 379
+ L P Y+ L+ R G+ + EL+ +
Sbjct: 493 EDGPL-PDSGTYNTLIRAHLRDGDKAASAELIRE 525
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 130/296 (43%), Gaps = 23/296 (7%)
Query: 114 LTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIP---- 169
L+A +++ + + + +LG S +++ + L++ + + S + A + ++
Sbjct: 17 LSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGY 76
Query: 170 EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQ 229
E + V ++LL+GY + + LV +M + + D T + + G
Sbjct: 77 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH----------GLF 126
Query: 230 LHSYVLRTTHDIESDVF--LQSSLIEMYGKC--GLVKKAQ--QVFKLDGVESRNERSRDV 283
LH+ ++ V Q +L+ YG GL K+ F L + DV
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVT-YGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 284 VLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFES 343
V++ +++ + + ++LFKEM +GIRP+ + + ++IS G+ +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 344 MSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
M E K+NP ++ L+D + G+ +A E L+ + K + I + +L+N
Sbjct: 246 MI-EKKINPNLVTFNALIDAFVKEGKFVEA-EKLHDDMIKRSIDPDIFTYNSLING 299
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/320 (20%), Positives = 142/320 (44%), Gaps = 20/320 (6%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+ +I+ C++G P LAL + M + D + + + + V+ + +
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMD 267
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWA 190
G VF S+L+ DA+ + ++ E+ N V N+L+ + + G
Sbjct: 268 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLI 327
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+ +L +M + + T ++ + ++ +Q+ + L + D DV ++
Sbjct: 328 EAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI--FTLMVSKDCLPDVVTYNT 385
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSR-----DVVLWTSMLGVYGRNGKYKEVIDL 305
LI G C KA++V +DG+E + SR + V +T+++ + + +
Sbjct: 386 LIN--GFC----KAKKV--VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLC 365
FK+M+ +G+ P+ + + T++ G++ + FE + K+ P Y+ + + +C
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS-KMEPDIYTYNIMSEGMC 496
Query: 366 RAGELQKAWELLNQTLYKGM 385
+AG+++ W+L KG+
Sbjct: 497 KAGKVEDGWDLFCSLSLKGV 516
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 122/270 (45%), Gaps = 12/270 (4%)
Query: 119 RVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTV 174
R + ++F I + KLG+ S+ ++L++ + + + +A + D++ E +TV
Sbjct: 112 RRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTV 171
Query: 175 CANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYV 234
L+ G + ++ + LV +M V + D T A + +L L + +
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
Query: 235 LRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR-DVVLWTSMLGVY 293
+ IE+DV + S++I+ K V A +F E N+ R DV ++S++
Sbjct: 232 EKGK--IEADVVIYSTVIDSLCKYRHVDDALNLF----TEMDNKGIRPDVFTYSSLISCL 285
Query: 294 GRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPG 353
G++ + L +MLE I P+ + F ++I A G++ K F+ M ++P
Sbjct: 286 CNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR-SIDPN 344
Query: 354 PEHYSCLVDLLCRAGELQKAWELLNQTLYK 383
Y+ L++ C L +A ++ + K
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/366 (18%), Positives = 144/366 (39%), Gaps = 45/366 (12%)
Query: 53 PKNHLQTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCS 112
P L L+ K + + ++ +I + C+ AL F+ M + D + S
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSS 280
Query: 113 TLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK- 171
++ + ++ + + + + +V ++L+D ++K + +A +FDE+ ++
Sbjct: 281 LISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS 340
Query: 172 --------------------------------------NTVCANALLSGYGEAGLWAQGL 193
+ V N L++G+ +A G+
Sbjct: 341 IDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGM 400
Query: 194 ELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIE 253
EL R M L + T + + S + + + ++ + + ++ ++L++
Sbjct: 401 ELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMV--SDGVHPNIMTYNTLLD 458
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
K G ++KA VF+ +++ D+ + M + GK ++ DLF + +G
Sbjct: 459 GLCKNGKLEKAMVVFEY---LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
++PD IA+ T+IS G F M + L P Y+ L+ R G+ +
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPL-PDSGTYNTLIRAHLRDGDKAAS 574
Query: 374 WELLNQ 379
EL+ +
Sbjct: 575 AELIKE 580
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 112/271 (41%), Gaps = 9/271 (3%)
Query: 73 LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAH 132
+ +N +IS C K A M + D Y + +N V Q
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 133 VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKN----TVCANALLSGYGEAGL 188
+ G V+ S ++D K ++ FDE+ KN TV N L+ Y +G
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
+ LEL M + + T ++ ++ + +S VE + L + +E +VF
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM--RMEGLEPNVFHY 718
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
++LI+ YGK G + K + + + + S+N + +T M+G Y R+G E L E
Sbjct: 719 TALIDGYGKLGQMVKVECLLR--EMHSKNVHPNKIT-YTVMIGGYARDGNVTEASRLLNE 775
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVK 339
M E+GI PD I + I G V K
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 280 SRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK 339
S DV L+T+ + + + GK +E + LF +M E G+ P+ + F TVI G G+
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 340 YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
+ E M E + P YS LV L RA + A+ +L + KG I ++ L+++
Sbjct: 317 FKEKMV-ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI-VYNNLIDS 374
Query: 400 CVDCGN----IELGKLAGQRALEL 419
++ G+ IE+ L + L L
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSL 398
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 172 NTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLH 231
+ V N L+SG + + +M LK D +T S + ++ VE Q
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 232 SYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
R + + DV+ S +I+ K ++ Q+ F D + S+N + VV + ++
Sbjct: 599 DDCKR--NGMLPDVYTYSVMIDGCCKAERTEEGQEFF--DEMMSKNVQPNTVV-YNHLIR 653
Query: 292 VYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLN 351
Y R+G+ ++L ++M +GI P+ + ++I +V FE M E L
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLE 712
Query: 352 PGPEHYSCLVDLLCRAGELQKAWELLNQ 379
P HY+ L+D + G++ K LL +
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLRE 740
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 16/318 (5%)
Query: 73 LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTL-TASSRVNDVNFGKQIHA 131
L V + F R G +LAL F + N + C+ L T+ R N+ +
Sbjct: 193 LLIEVYCTQFKRDGC-YLALDVFPVL-ANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD 250
Query: 132 HVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAG 187
V K G S V++ + ++ + K V++A +F ++ E N V N ++ G G G
Sbjct: 251 VVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
+ + KM ++ T S ++ T A +G T +V +
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLT--RAKRIGDAYFVLKEMTKKGFPPNVIV 367
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
++LI+ + + G + KA ++ L + + S + +++ Y +NG+ L K
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST---YNTLIKGYCKNGQADNAERLLK 424
Query: 308 EMLEEGIRPDGIAFLTVISA-CGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
EML G + +F +VI C H + +++ M ++PG + L+ LC+
Sbjct: 425 EMLSIGFNVNQGSFTSVICLLCSHL-MFDSALRFVGEMLLR-NMSPGGGLLTTLISGLCK 482
Query: 367 AGELQKAWELLNQTLYKG 384
G+ KA EL Q L KG
Sbjct: 483 HGKHSKALELWFQFLNKG 500
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 112/271 (41%), Gaps = 9/271 (3%)
Query: 73 LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAH 132
+ +N +IS C K A M + D Y + +N V Q
Sbjct: 541 VSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDD 600
Query: 133 VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKN----TVCANALLSGYGEAGL 188
+ G V+ S ++D K ++ FDE+ KN TV N L+ Y +G
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGR 660
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
+ LEL M + + T ++ ++ + +S VE + L + +E +VF
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM--RMEGLEPNVFHY 718
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
++LI+ YGK G + K + + + + S+N + +T M+G Y R+G E L E
Sbjct: 719 TALIDGYGKLGQMVKVECLLR--EMHSKNVHPNKIT-YTVMIGGYARDGNVTEASRLLNE 775
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVK 339
M E+GI PD I + I G V K
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 280 SRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVK 339
S DV L+T+ + + + GK +E + LF +M E G+ P+ + F TVI G G+
Sbjct: 257 SPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFM 316
Query: 340 YFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
+ E M E + P YS LV L RA + A+ +L + KG I ++ L+++
Sbjct: 317 FKEKMV-ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVI-VYNNLIDS 374
Query: 400 CVDCGN----IELGKLAGQRALEL 419
++ G+ IE+ L + L L
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSL 398
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 6/208 (2%)
Query: 172 NTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLH 231
+ V N L+SG + + +M LK D +T S + ++ VE Q
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598
Query: 232 SYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLG 291
R + + DV+ S +I+ K ++ Q+ F D + S+N + VV + ++
Sbjct: 599 DDCKR--NGMLPDVYTYSVMIDGCCKAERTEEGQEFF--DEMMSKNVQPNTVV-YNHLIR 653
Query: 292 VYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLN 351
Y R+G+ ++L ++M +GI P+ + ++I +V FE M E L
Sbjct: 654 AYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLE 712
Query: 352 PGPEHYSCLVDLLCRAGELQKAWELLNQ 379
P HY+ L+D + G++ K LL +
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLRE 740
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 135/318 (42%), Gaps = 16/318 (5%)
Query: 73 LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTL-TASSRVNDVNFGKQIHA 131
L V + F R G +LAL F + N + C+ L T+ R N+ +
Sbjct: 193 LLIEVYCTQFKRDGC-YLALDVFPVL-ANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD 250
Query: 132 HVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAG 187
V K G S V++ + ++ + K V++A +F ++ E N V N ++ G G G
Sbjct: 251 VVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
+ + KM ++ T S ++ T A +G T +V +
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLT--RAKRIGDAYFVLKEMTKKGFPPNVIV 367
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
++LI+ + + G + KA ++ L + + S + +++ Y +NG+ L K
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSST---YNTLIKGYCKNGQADNAERLLK 424
Query: 308 EMLEEGIRPDGIAFLTVISA-CGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
EML G + +F +VI C H + +++ M ++PG + L+ LC+
Sbjct: 425 EMLSIGFNVNQGSFTSVICLLCSHL-MFDSALRFVGEMLLR-NMSPGGGLLTTLISGLCK 482
Query: 367 AGELQKAWELLNQTLYKG 384
G+ KA EL Q L KG
Sbjct: 483 HGKHSKALELWFQFLNKG 500
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 133/281 (47%), Gaps = 29/281 (10%)
Query: 142 VFVGSALVDLYSKLSSVKDAALVFDEIPEK---------NTVCANALLSGYGEAGLWAQG 192
V V +A++ +YS+ A + D + ++ NT+ L SG L +
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVEL 284
Query: 193 LELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLI 252
L++VR L+ D T + L AC+ S ++ ++ + H + D++ +++I
Sbjct: 285 LDMVRNSG---LRPDAITYNTLLSACSRDSNLDGAVKVFEDM--EAHRCQPDLWTYNAMI 339
Query: 253 EMYGKCGLVKKAQQVF---KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
+YG+CGL +A+++F +L G D V + S+L + R ++V +++++M
Sbjct: 340 SVYGRCGLAAEAERLFMELELKGFFP------DAVTYNSLLYAFARERNTEKVKEVYQQM 393
Query: 310 LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGE 369
+ G D + + T+I G GQ+ ++ ++ M NP Y+ L+D L +A
Sbjct: 394 QKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANR 453
Query: 370 LQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGK 410
+A L+++ L G+ T+ + AL+ CG + GK
Sbjct: 454 TVEAAALMSEMLDVGI-KPTLQTYSALI-----CGYAKAGK 488
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 116/268 (43%), Gaps = 15/268 (5%)
Query: 124 NFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIP----EKNTVCANAL 179
N ++ V G + L+ S+ S++ A VF+++ + + NA+
Sbjct: 279 NLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAM 338
Query: 180 LSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTH 239
+S YG GL A+ L ++ + D T ++ L A E ++++ + +
Sbjct: 339 ISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGF 398
Query: 240 DIESDVFLQSSLIEMYGKCGLVKKAQQVFK-LDGVESRNERSRDVVLWTSMLGVYGRNGK 298
D +++I MYGK G + A Q++K + G+ RN D + +T ++ G+ +
Sbjct: 399 G--KDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNP---DAITYTVLIDSLGKANR 453
Query: 299 YKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEH-- 356
E L EML+ GI+P + +I G+ F M + P++
Sbjct: 454 TVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCM---LRSGTKPDNLA 510
Query: 357 YSCLVDLLCRAGELQKAWELLNQTLYKG 384
YS ++D+L R E +KAW L + G
Sbjct: 511 YSVMLDVLLRGNETRKAWGLYRDMISDG 538
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 167/395 (42%), Gaps = 12/395 (3%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
N + FN +I A+ M D + + + + D++ +
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEA 186
+ K + V + + ++D +V DA +F E+ K N V N+L+
Sbjct: 244 KKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 303
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
G W+ L+ M ++ + T SA + A + +L+ +++ + I+ D+F
Sbjct: 304 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS--IDPDIF 361
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
SSLI + + +A+ +F+L + +VV + +++ + + + +E ++LF
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFEL---MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
+EM + G+ + + + T+I G K F+ M ++ + P YS L+D LC+
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD-GVPPDIITYSILLDGLCK 477
Query: 367 AGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELG-KLAGQRALELDPHNAG 425
G+L+KA + + L K I + ++ G +E G L +L+ N
Sbjct: 478 YGKLEKALVVF-EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVI 536
Query: 426 ICILLSNLYARFGMWDEIGHLRVVIKERGLRKDVG 460
I + + + R G+ +E L +KE G + G
Sbjct: 537 IYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 121/281 (43%), Gaps = 15/281 (5%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
N + F+ +I F ++G A + M ++ D + S + + ++ K +
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEA 186
+ +V + L+ + K V++ +F E+ ++ NTV N L+ G +A
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQA 443
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
G ++ +KM + D T S L +E + Y+ ++ +E D++
Sbjct: 444 GDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK--MEPDIY 501
Query: 247 LQSSLIEMYGKCGLVKKAQQVF---KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
+ +IE K G V+ +F L GV+ +V+++T+M+ + R G +E
Sbjct: 502 TYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP------NVIIYTTMISGFCRKGLKEEAD 555
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
LF+EM E+G P+ + T+I A G A + + M
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEM 596
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 157/381 (41%), Gaps = 26/381 (6%)
Query: 15 TKNLSAIKKLHGNLLRTGTLFFLHDLHTNLIA-AYATCLPKNHLQTLH-----NFFKCMN 68
+K +S K+ L + LF L ++ + + Y L +N L L + F M
Sbjct: 14 SKKMSLAKRF-AQLRKASPLFSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMV 72
Query: 69 STNPL----HFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVN 124
+ PL FN ++S + L ++ M + D Y+ + R + +
Sbjct: 73 QSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLP 132
Query: 125 FGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEI----PEKNTVCANALL 180
+ + KLG+ + S+L++ Y + +A + D++ + NTV N L+
Sbjct: 133 LALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLI 192
Query: 181 SGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHD 240
G ++ + L+ +M + D FT + ++L L + +
Sbjct: 193 HGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK-- 250
Query: 241 IESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR-DVVLWTSMLGVYGRNGKY 299
IE+DV + +++I+ V A +F E N+ R +VV + S++ G++
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLF----TEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 300 KEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSC 359
+ L +M+E I P+ + F +I A G++ K ++ M ++P YS
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSS 365
Query: 360 LVDLLC---RAGELQKAWELL 377
L++ C R E + +EL+
Sbjct: 366 LINGFCMHDRLDEAKHMFELM 386
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 176/408 (43%), Gaps = 46/408 (11%)
Query: 73 LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAH 132
L +NV+I + + AL+ F M D S + V+ V+ ++I A
Sbjct: 516 LEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAE 575
Query: 133 VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAGL 188
+ G +A++ Y +L + DA +++ + + N V +L++G+ E+G+
Sbjct: 576 MLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGM 635
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIE--SDVF 246
+ ++ R M ++ + L++ ++A + + +E R+++ + D E DV
Sbjct: 636 VEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKM----KDSEGGPDVA 691
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
+S++ + G+V +A+ +F R + + DV+ + +M+ +Y G E I++
Sbjct: 692 ASNSMLSLCADLGIVSEAESIFN----ALREKGTCDVISFATMMYLYKGMGMLDEAIEVA 747
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
+EM E G+ D +F V++ GQ+ + F M E KL + L LL +
Sbjct: 748 EEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKK 807
Query: 367 AG-------ELQKAW--------ELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKL 411
G +LQ A+ + TL+ MG ++ L +C + + E+ +
Sbjct: 808 GGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMG-----LYAYALESCQELTSGEIPR- 861
Query: 412 AGQRALELDPHNAGICILLSNLYARFGMWDEIGHLRVVIKERGLRKDV 459
E +NA I Y+ G D + ++E+GL D+
Sbjct: 862 ------EHFAYNAVIYT-----YSASGDIDMALKAYMRMQEKGLEPDI 898
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/450 (20%), Positives = 175/450 (38%), Gaps = 73/450 (16%)
Query: 63 FFKCMNSTNPLH---FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSR 119
F + + S P+ FN +I G A + M + DT L+ +
Sbjct: 328 FSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHAD 387
Query: 120 VNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTV----- 174
D+ + + + K+G A++ + + V + V E+ ++N++
Sbjct: 388 AGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEM-DRNSIRIDEH 446
Query: 175 CANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAV-----ELGRQ 229
++ Y GL Q L +++F L L + T L+AV E G
Sbjct: 447 SVPVIMQMYVNEGLVVQAKAL----------FERFQLDCVLSSTT-LAAVIDVYAEKGLW 495
Query: 230 LHS----YVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFK---------------- 269
+ + Y R +DV + +I+ YGK L +KA +FK
Sbjct: 496 VEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNS 555
Query: 270 ----LDGVESRNERSRDVV------------LWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
L GV+ +E R + + +M+ Y R G + +DL++ M + G
Sbjct: 556 LFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTG 615
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
++P+ + + ++I+ +G V ++YF M E + + L+ + G L++A
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFR-MMEEHGVQSNHIVLTSLIKAYSKVGCLEEA 674
Query: 374 WELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRALELDPHNAGICILLS-- 431
+ ++ + G ++ ++L+ C D LG ++ ++ G C ++S
Sbjct: 675 RRVYDK-MKDSEGGPDVAASNSMLSLCAD-----LGIVSEAESIFNALREKGTCDVISFA 728
Query: 432 ---NLYARFGMWDEIGHLRVVIKERGLRKD 458
LY GM DE + ++E GL D
Sbjct: 729 TMMYLYKGMGMLDEAIEVAEEMRESGLLSD 758
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 14/181 (7%)
Query: 272 GVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHT 331
G +S + R + +++ +YG+ G+ + +LF EML+ G+ D + F T+I CG
Sbjct: 294 GSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTH 353
Query: 332 GQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTIS 391
G + + M E ++P + Y+ L+ L AG+++ A E + G+ T++
Sbjct: 354 GHLSEAESLLKKM-EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVT 412
Query: 392 MWGALLNACVDCGNIELGKLAGQ---RALELDPH----------NAGICILLSNLYARFG 438
L C E+ + + ++ +D H N G+ + L+ RF
Sbjct: 413 HRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQ 472
Query: 439 M 439
+
Sbjct: 473 L 473
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 149/352 (42%), Gaps = 49/352 (13%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
FN++I+ FC LAL+ M D + S + R N V+ + +
Sbjct: 123 FNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMV 182
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWA 190
++G+ + +A++D K V DA F EI K N V AL++G + W+
Sbjct: 183 EIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWS 242
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
L+ M ++ + T SA L A V ++L ++R + I+ D+ SS
Sbjct: 243 DAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMS--IDPDIVTYSS 300
Query: 251 LIEMYGKC--GLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
LI G C + +A Q+F L + S+ + DVV + +++ + + + ++ + LF+E
Sbjct: 301 LIN--GLCLHDRIDEANQMFDL--MVSKGCLA-DVVSYNTLINGFCKAKRVEDGMKLFRE 355
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCL-------- 360
M + G+ + + + T+I G V ++F M + F ++P Y+ L
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNG 414
Query: 361 ----------------VDL-----------LCRAGELQKAWELLNQTLYKGM 385
+DL +C+ G++++AW L KG+
Sbjct: 415 ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL 466
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 119/272 (43%), Gaps = 22/272 (8%)
Query: 139 SSSVFVGSALVDLYSKLSSVK-------DAALVFDEI----PEKNTVCANALLSGYGEAG 187
SSSV G DL +LS + DA +F ++ P + V N LLS +
Sbjct: 44 SSSVSGG----DLRERLSKTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLK 99
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
+ + L +KM VL ++ D +T + + V L + +L+ + E D
Sbjct: 100 KYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGY--EPDRVT 157
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
SL+ G C + + V +D + + D+V + +++ + + + D FK
Sbjct: 158 IGSLVN--GFCRRNRVSDAVSLVDKMVEIGYKP-DIVAYNAIIDSLCKTKRVNDAFDFFK 214
Query: 308 EMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRA 367
E+ +GIRP+ + + +++ ++ + + M + K+ P YS L+D +
Sbjct: 215 EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KITPNVITYSALLDAFVKN 273
Query: 368 GELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
G++ +A EL + + + + I + +L+N
Sbjct: 274 GKVLEAKELFEEMVRMSI-DPDIVTYSSLING 304
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 119/266 (44%), Gaps = 23/266 (8%)
Query: 60 LHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLD--TYA-LCSTLTA 116
L + K + N + ++ ++ F + G A F M ++ D TY+ L + L
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 117 SSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----N 172
R+++ N Q+ + G + V + L++ + K V+D +F E+ ++ N
Sbjct: 308 HDRIDEAN---QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 364
Query: 173 TVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGL-SAVELGRQLH 231
TV N L+ G+ +AG + E +M + D +T + L GL EL + L
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL---GGLCDNGELEKALV 421
Query: 232 SYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF---KLDGVESRNERSRDVVLWTS 288
+ +++ D+ +++I K G V++A +F L G++ D+V +T+
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKP------DIVTYTT 475
Query: 289 MLGVYGRNGKYKEVIDLFKEMLEEGI 314
M+ G EV L+ +M +EG+
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEGL 501
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 124/294 (42%), Gaps = 13/294 (4%)
Query: 62 NFFKCMNST----NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTAS 117
+FFK + N + + +++ C A S M + + + L A
Sbjct: 211 DFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAF 270
Query: 118 SRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NT 173
+ V K++ + ++ + S+L++ + +A +FD + K +
Sbjct: 271 VKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADV 330
Query: 174 VCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSY 233
V N L++G+ +A G++L R+M L + T + ++ V+ ++ S
Sbjct: 331 VSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQ 390
Query: 234 VLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVY 293
+ I D++ + L+ G ++KA +F + ++ R E D+V +T+++
Sbjct: 391 M--DFFGISPDIWTYNILLGGLCDNGELEKALVIF--EDMQKR-EMDLDIVTYTTVIRGM 445
Query: 294 GRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNE 347
+ GK +E LF + +G++PD + + T++S G +H + M E
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/317 (20%), Positives = 139/317 (43%), Gaps = 9/317 (2%)
Query: 73 LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAH 132
+ +N +I+ FC+ G + L + M N + + + + + A + + + +
Sbjct: 333 ITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVD 392
Query: 133 VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEI----PEKNTVCANALLSGYGEAGL 188
+ ++G + + ++L+D K+ ++ DA + +E+ E N V AL+ G +A
Sbjct: 393 MRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
+ EL KM + + + +A + + A + R L I+ D+ L
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHG--FVKAKNMDRALELLNELKGRGIKPDLLLY 510
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
+ I +G C L K ++ ++ ++ ++ +T+++ Y ++G E + L E
Sbjct: 511 GTFI--WGLCSLEKIEAAKVVMNEMKECGIKANSLI-YTTLMDAYFKSGNPTEGLHLLDE 567
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAG 368
M E I + F +I V V YF +SN+F L ++ ++D LC+
Sbjct: 568 MKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDN 627
Query: 369 ELQKAWELLNQTLYKGM 385
+++ A L Q + KG+
Sbjct: 628 QVEAATTLFEQMVQKGL 644
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 78/161 (48%), Gaps = 7/161 (4%)
Query: 243 SDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR-DVVLWTSMLGVYGRNGKYKE 301
D +S+I+ +GK G + F+ E ++ DV+ + +++ + + GK
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFE----EMKDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLV 361
++ ++EM G++P+ +++ T++ A G + +K++ M L P Y+ L+
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM-RRVGLVPNEYTYTSLI 409
Query: 362 DLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVD 402
D C+ G L A+ L N+ L G+ + + AL++ D
Sbjct: 410 DANCKIGNLSDAFRLGNEMLQVGV-EWNVVTYTALIDGLCD 449
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/322 (19%), Positives = 136/322 (42%), Gaps = 52/322 (16%)
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
S N + ++ I FC+ G LAL +F M + + + + + D+
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYG 184
++ + ++ S +V +AL+D + K ++ A ++ + E N++ ++ G+
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESD 244
+ G ++ + KM L+ +R D
Sbjct: 280 QRGDSDNAMKFLAKM-----------LNQGMRL--------------------------D 302
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVID 304
+ +I G CG K + ++ +E +++ D+V++T+M+ Y ++G+ K ++
Sbjct: 303 ITAYGVIIS--GLCGNGKLKEATEIVEDME-KSDLVPDMVIFTTMMNAYFKSGRMKAAVN 359
Query: 305 LFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYF-ESMSNEFKLNPGPEHYSCLVDL 363
++ +++E G PD +A T+I GQ+H + YF +N+ Y+ L+D
Sbjct: 360 MYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDV-------MYTVLIDA 412
Query: 364 LCRAGELQKAWELLNQTLYKGM 385
LC+ G+ + L ++ G+
Sbjct: 413 LCKEGDFIEVERLFSKISEAGL 434
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 150/348 (43%), Gaps = 19/348 (5%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
N +N++I C+ G A M D + + + R +++ ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEA 186
+ + G + ++ +++ L ++ + +A F E+ + +TV L+ G+ +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRA-CTGLSAVELGRQLHSYVLRTTHDIESDV 245
G + +M + D T +A + C VE G+ H + +E D
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK---GLEPDS 421
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
+ LI Y K G +K A F++ + S +VV +T+++ + G +L
Sbjct: 422 VTFTELINGYCKAGHMKDA---FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFK---LNPGPEHYSCLVD 362
EM + G++P+ + ++++ +G + VK + EF+ LN Y+ L+D
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK----LVGEFEAAGLNADTVTYTTLMD 534
Query: 363 LLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGK 410
C++GE+ KA E+L + L KG+ TI + L+N G +E G+
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGL-QPTIVTFNVLMNGFCLHGMLEDGE 581
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 141/333 (42%), Gaps = 19/333 (5%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND-VNFGKQIHAHV 133
+ +I FC++G A F MH+ ++ D + ++ ++ D V GK H
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 134 GKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAGLW 189
K G + L++ Y K +KDA V + + + N V L+ G + G
Sbjct: 414 CK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 190 AQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQS 249
EL+ +M + L+ + FT ++ + +E +L + +D +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF--EAAGLNADTVTYT 530
Query: 250 SLIEMYGKCGLVKKAQQVFKL---DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
+L++ Y K G + KAQ++ K G++ +V + ++ + +G ++ L
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPT------IVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
ML +GI P+ F +++ + A ++ M + + P + Y LV C+
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCK 643
Query: 367 AGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
A +++AW L + KG + ++S + L+
Sbjct: 644 ARNMKEAWFLFQEMKGKGF-SVSVSTYSVLIKG 675
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/348 (21%), Positives = 150/348 (43%), Gaps = 19/348 (5%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
N +N++I C+ G A M D + + + R +++ ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEA 186
+ + G + ++ +++ L ++ + +A F E+ + +TV L+ G+ +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRA-CTGLSAVELGRQLHSYVLRTTHDIESDV 245
G + +M + D T +A + C VE G+ H + +E D
Sbjct: 365 GDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK---GLEPDS 421
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDL 305
+ LI Y K G +K A F++ + S +VV +T+++ + G +L
Sbjct: 422 VTFTELINGYCKAGHMKDA---FRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 306 FKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFK---LNPGPEHYSCLVD 362
EM + G++P+ + ++++ +G + VK + EF+ LN Y+ L+D
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK----LVGEFEAAGLNADTVTYTTLMD 534
Query: 363 LLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGK 410
C++GE+ KA E+L + L KG+ TI + L+N G +E G+
Sbjct: 535 AYCKSGEMDKAQEILKEMLGKGL-QPTIVTFNVLMNGFCLHGMLEDGE 581
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 141/333 (42%), Gaps = 19/333 (5%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVND-VNFGKQIHAHV 133
+ +I FC++G A F MH+ ++ D + ++ ++ D V GK H
Sbjct: 354 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 413
Query: 134 GKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAGLW 189
K G + L++ Y K +KDA V + + + N V L+ G + G
Sbjct: 414 CK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472
Query: 190 AQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQS 249
EL+ +M + L+ + FT ++ + +E +L + +D +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF--EAAGLNADTVTYT 530
Query: 250 SLIEMYGKCGLVKKAQQVFKL---DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
+L++ Y K G + KAQ++ K G++ +V + ++ + +G ++ L
Sbjct: 531 TLMDAYCKSGEMDKAQEILKEMLGKGLQPT------IVTFNVLMNGFCLHGMLEDGEKLL 584
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
ML +GI P+ F +++ + A ++ M + + P + Y LV C+
Sbjct: 585 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR-GVGPDGKTYENLVKGHCK 643
Query: 367 AGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
A +++AW L + KG + ++S + L+
Sbjct: 644 ARNMKEAWFLFQEMKGKGF-SVSVSTYSVLIKG 675
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 143/316 (45%), Gaps = 27/316 (8%)
Query: 149 VDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQ 208
+D++ S+ D ALVF E + + L Y + +W + E +
Sbjct: 96 LDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHI------------ 143
Query: 209 FTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF 268
+T+ +L GL L + L + + + VF ++LI YG+ G + + ++
Sbjct: 144 YTIMISLLGREGL----LDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL- 198
Query: 269 KLDGVESRNER-SRDVVLWTSMLGVYGRNG-KYKEVIDLFKEMLEEGIRPDGIAFLTVIS 326
LD + +NE+ S ++ + +++ R G ++ ++ LF EM EGI+PD + + T++S
Sbjct: 199 -LDRM--KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLS 255
Query: 327 ACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMG 386
AC G F +M N+ + P YS LV+ + L+K +LL + + G
Sbjct: 256 ACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGE-MASGGS 313
Query: 387 NCTISMWGALLNACVDCGNIE--LGKLAGQRALELDPHNAGICILLSNLYARFGMWDEIG 444
I+ + LL A G+I+ +G +A P NA +L NL+ + G +D++
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP-NANTYSVLLNLFGQSGRYDDVR 372
Query: 445 HLRVVIKERGLRKDVG 460
L + +K D
Sbjct: 373 QLFLEMKSSNTDPDAA 388
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 7/150 (4%)
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR-DVVLWTSMLGVYGRNGKYKEVIDLFK 307
S L+ ++G+ G +Q+F +E ++ + D + ++ V+G G +KEV+ LF
Sbjct: 356 SVLLNLFGQSGRYDDVRQLF----LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFH 411
Query: 308 EMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRA 367
+M+EE I PD + +I ACG G K + M+ + P + Y+ +++ +A
Sbjct: 412 DMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-DIVPSSKAYTGVIEAFGQA 470
Query: 368 GELQKAWELLNQTLYKGMGNCTISMWGALL 397
++A N T+++ N +I + +LL
Sbjct: 471 ALYEEALVAFN-TMHEVGSNPSIETFHSLL 499
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/325 (20%), Positives = 140/325 (43%), Gaps = 26/325 (8%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+ +++ +FC+ G A F+ M + + + A + V++ ++ +
Sbjct: 521 YTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFD------EIPE--------------KNTV 174
G ++ SAL+D + K V+ A +F+ ++P+ N V
Sbjct: 581 SEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVV 640
Query: 175 CANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYV 234
ALL G+ ++ + +L+ M + + +Q A + + ++ +++ + +
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 235 LRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYG 294
+ H + ++ SSLI+ Y K VK+ K+ N + +VV++T M+
Sbjct: 701 --SEHGFPATLYTYSSLIDRYFK---VKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 295 RNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGP 354
+ GK E L + M E+G +P+ + + +I G G++ ++ E M ++ + P
Sbjct: 756 KVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK-GVAPNY 814
Query: 355 EHYSCLVDLLCRAGELQKAWELLNQ 379
Y L+D C+ G L A LL +
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEE 839
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 105/238 (44%), Gaps = 23/238 (9%)
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
AG + + ++R+M D T S L S +EL L + R + +DV
Sbjct: 461 AGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRG--GLVADV 518
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNER-SRDVVLWTSMLGVYGRNGKYKEVID 304
+ + +++ + K GL+++A++ F E R + +VV +T+++ Y + K +
Sbjct: 519 YTYTIMVDSFCKAGLIEQARKWFN----EMREVGCTPNVVTYTALIHAYLKAKKVSYANE 574
Query: 305 LFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMS---------------NEFK 349
LF+ ML EG P+ + + +I GQV + FE M ++
Sbjct: 575 LFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS 634
Query: 350 LNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIE 407
P Y L+D C++ +++A +LL+ +G I ++ AL++ G ++
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQI-VYDALIDGLCKVGKLD 691
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 86/425 (20%), Positives = 167/425 (39%), Gaps = 62/425 (14%)
Query: 70 TNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQI 129
+N F+++I + + A AF+ + + + A + + + R+ V +
Sbjct: 163 SNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGV 222
Query: 130 HAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGE 185
+ + + G +V+ + +V+ K ++ ++ EK + V N L+S Y
Sbjct: 223 YQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 186 AGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDV 245
GL + EL+ MP +T + + E +++ + +LR+ +S
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTT 342
Query: 246 FLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVV----LWTSMLGVYGRNGKYKE 301
+ SL+ K G V + ++VF + RSRDVV ++SM+ ++ R+G +
Sbjct: 343 Y--RSLLMEACKKGDVVETEKVFS-------DMRSRDVVPDLVCFSSMMSLFTRSGNLDK 393
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGV----------------------- 338
+ F + E G+ PD + + +I G + +
Sbjct: 394 ALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILH 453
Query: 339 ------------KYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMG 386
K F M+ E L P + L+D C+ G LQ A EL + K +
Sbjct: 454 GLCKRKMLGEADKLFNEMT-ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI- 511
Query: 387 NCTISMWGALLNACVDCGNIELGK--LAGQRALELDPHNAGICILLSNLYAR------FG 438
+ + LL+ G+I+ K A + E+ P IL++ L ++ F
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 439 MWDEI 443
+WDE+
Sbjct: 572 VWDEM 576
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 58/316 (18%), Positives = 127/316 (40%), Gaps = 12/316 (3%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+ ++I +CRKG +A+ + M +D + L + + ++ +
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWA 190
+ + + L+D + KL ++++A +F ++ EK + V N LL G+G+ G
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
E+ M + + S + A S L + + +I+ V + +S
Sbjct: 533 TAKEIWADMVSKEILPTPISYSILVNALC--SKGHLAEAFRVWDEMISKNIKPTVMICNS 590
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML 310
+I+ Y + G + + E D + + +++ + R + L K+M
Sbjct: 591 MIKGYCRSGNASDGESFLEKMISEGF---VPDCISYNTLIYGFVREENMSKAFGLVKKME 647
Query: 311 EE--GIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAG 368
EE G+ PD + +++ Q+ M E +NP Y+C+++
Sbjct: 648 EEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI-ERGVNPDRSTYTCMINGFVSQD 706
Query: 369 ELQKAWELLNQTLYKG 384
L +A+ + ++ L +G
Sbjct: 707 NLTEAFRIHDEMLQRG 722
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 146/337 (43%), Gaps = 11/337 (3%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
F+ ++S F R G AL F+ + + D + R ++ + +
Sbjct: 378 FSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWA 190
+ G + V + ++ K + +A +F+E+ E+ ++ L+ G+ + G
Sbjct: 438 QQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+EL +KM R++ D T + L + ++ +++ + ++ + +I S
Sbjct: 498 NAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMV--SKEILPTPISYSI 555
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML 310
L+ G + +A +V+ D + S+N + V++ SM+ Y R+G + ++M+
Sbjct: 556 LVNALCSKGHLAEAFRVW--DEMISKNIKP-TVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 311 EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEF-KLNPGPEHYSCLVDLLCRAGE 369
EG PD I++ T+I + + M E L P Y+ ++ CR +
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 370 LQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNI 406
+++A +L + + +G+ N S + ++N V N+
Sbjct: 673 MKEAEVVLRKMIERGV-NPDRSTYTCMINGFVSQDNL 708
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 8/217 (3%)
Query: 170 EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQ 229
+ NTV N L+ YG A + + + +M K D+ T + +++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 230 LHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNER-SRDVVLWTS 288
+ Y + D F S +I GK G + A ++F E ++ + ++V +
Sbjct: 456 M--YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF----CEMVDQGCTPNLVTYNI 509
Query: 289 MLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEF 348
M+ ++ + Y+ + L+++M G PD + + V+ GH G + F M +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 349 KLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGM 385
+ P Y LVDL +AG ++KAW+ L+ G+
Sbjct: 570 WI-PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 111/265 (41%), Gaps = 15/265 (5%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
N + +N +I ++ R + A+ F+ M D C+ + ++ ++ ++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEA 186
+ G S F S +++ K + A +F E+ ++ N V N ++ + +A
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
+ L+L R M + D+ T S + +E + + + + + V+
Sbjct: 518 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKL---DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
L++++GK G V+KA Q ++ G+ +V S+L + R K E
Sbjct: 578 --GLLVDLWGKAGNVEKAWQWYQAMLHAGLRP------NVPTCNSLLSTFLRVNKIAEAY 629
Query: 304 DLFKEMLEEGIRPDGIAFLTVISAC 328
+L + ML G+RP + ++S C
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCC 654
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
M G G K+ + KL R+ + V + ++ YGR E +++F +M E G
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
+PD + + T+I G + + ++ M L+P YS +++ L +AG L A
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 374 WELLNQTLYKGMGNCTISM 392
+L + + +G CT ++
Sbjct: 489 HKLFCEMVDQG---CTPNL 504
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 8/217 (3%)
Query: 170 EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQ 229
+ NTV N L+ YG A + + + +M K D+ T + +++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 230 LHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNER-SRDVVLWTS 288
+ Y + D F S +I GK G + A ++F E ++ + ++V +
Sbjct: 456 M--YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF----CEMVDQGCTPNLVTYNI 509
Query: 289 MLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEF 348
M+ ++ + Y+ + L+++M G PD + + V+ GH G + F M +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 349 KLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGM 385
+ P Y LVDL +AG ++KAW+ L+ G+
Sbjct: 570 WI-PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 111/265 (41%), Gaps = 15/265 (5%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
N + +N +I ++ R + A+ F+ M D C+ + ++ ++ ++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEA 186
+ G S F S +++ K + A +F E+ ++ N V N ++ + +A
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
+ L+L R M + D+ T S + +E + + + + + V+
Sbjct: 518 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKL---DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
L++++GK G V+KA Q ++ G+ +V S+L + R K E
Sbjct: 578 --GLLVDLWGKAGNVEKAWQWYQAMLHAGLRP------NVPTCNSLLSTFLRVNKIAEAY 629
Query: 304 DLFKEMLEEGIRPDGIAFLTVISAC 328
+L + ML G+RP + ++S C
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCC 654
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
M G G K+ + KL R+ + V + ++ YGR E +++F +M E G
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
+PD + + T+I G + + ++ M L+P YS +++ L +AG L A
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 374 WELLNQTLYKGMGNCTISM 392
+L + + +G CT ++
Sbjct: 489 HKLFCEMVDQG---CTPNL 504
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 137/316 (43%), Gaps = 14/316 (4%)
Query: 76 NVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVGK 135
N++++ FCR LAL+ M S L R + V + +
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 136 LGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWAQ 191
+G+ +V + + ++D K V +A + + + + + V N+L+SG +G W+
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 192 GLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSL 251
+V M + D FT +A + AC V + + ++R + D D+ S L
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLD--PDIVTYSLL 297
Query: 252 IEMYGKC--GLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
I YG C + +A+++F G DVV ++ ++ Y ++ K + + LF EM
Sbjct: 298 I--YGLCMYSRLDEAEEMF---GFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 310 LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGE 369
+ G+ + + + +I G+++ + F M ++P Y+ L+ LC G+
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF-CGVHPNIITYNVLLHGLCDNGK 411
Query: 370 LQKAWELLNQTLYKGM 385
++KA +L GM
Sbjct: 412 IEKALVILADMQKNGM 427
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 8/217 (3%)
Query: 170 EKNTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQ 229
+ NTV N L+ YG A + + + +M K D+ T + +++
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 230 LHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNER-SRDVVLWTS 288
+ Y + D F S +I GK G + A ++F E ++ + ++V +
Sbjct: 456 M--YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLF----CEMVDQGCTPNLVTYNI 509
Query: 289 MLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEF 348
M+ ++ + Y+ + L+++M G PD + + V+ GH G + F M +
Sbjct: 510 MMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 349 KLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGM 385
+ P Y LVDL +AG ++KAW+ L+ G+
Sbjct: 570 WI-PDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGL 605
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 111/265 (41%), Gaps = 15/265 (5%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
N + +N +I ++ R + A+ F+ M D C+ + ++ ++ ++
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMY 457
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEA 186
+ G S F S +++ K + A +F E+ ++ N V N ++ + +A
Sbjct: 458 QRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKA 517
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
+ L+L R M + D+ T S + +E + + + + + V+
Sbjct: 518 RNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVY 577
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKL---DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
L++++GK G V+KA Q ++ G+ +V S+L + R K E
Sbjct: 578 --GLLVDLWGKAGNVEKAWQWYQAMLHAGLRP------NVPTCNSLLSTFLRVNKIAEAY 629
Query: 304 DLFKEMLEEGIRPDGIAFLTVISAC 328
+L + ML G+RP + ++S C
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLSCC 654
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 254 MYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEG 313
M G G K+ + KL R+ + V + ++ YGR E +++F +M E G
Sbjct: 370 MVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAG 429
Query: 314 IRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKA 373
+PD + + T+I G + + ++ M L+P YS +++ L +AG L A
Sbjct: 430 CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 374 WELLNQTLYKGMGNCTISM 392
+L + + +G CT ++
Sbjct: 489 HKLFCEMVDQG---CTPNL 504
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 110/238 (46%), Gaps = 10/238 (4%)
Query: 146 SALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWAQGLELVRKMPV 201
S ++D K S+ +A +F+E+ K N + N L+ G+ AG W G +L+R M
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
++ + T S + + + +LH ++ I D +SLI+ + K +
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH--RGIAPDTITYTSLIDGFCKENHL 384
Query: 262 KKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAF 321
KA Q+ L + + R + ++ Y + + + ++LF++M G+ D + +
Sbjct: 385 DKANQMVDLMVSKGCDPNIRT---FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTY 441
Query: 322 LTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQ 379
T+I G+++ + F+ M + K+ P Y L+D LC GE +KA E+ +
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/351 (19%), Positives = 148/351 (42%), Gaps = 16/351 (4%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
N +++I+ FCR LA +A + +T + + V+ ++
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEA 186
+ ++G + + LV+ +A L+ D++ E N V +L+ ++
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
G A +EL+RKM +K D S + +++ L + + I +++
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM--EMKGITTNII 299
Query: 247 LQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLF 306
+ LI + G ++ + D + + + + +VV ++ ++ + + GK +E +L
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLR-DMI--KRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 307 KEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCR 366
KEM+ GI PD I + ++I + + + M ++ +P ++ L++ C+
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK-GCDPNIRTFNILINGYCK 415
Query: 367 AGELQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGKLAGQRAL 417
A + EL + +G+ T++ + L+ G ELGKL + L
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVT-YNTLIQ-----GFCELGKLNVAKEL 460
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 118/294 (40%), Gaps = 15/294 (5%)
Query: 58 QTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTAS 117
+ L + K + N + F+V+I +F ++G A M + DT S +
Sbjct: 319 KLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGF 378
Query: 118 SRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NT 173
+ N ++ Q+ + G ++ + L++ Y K + + D +F ++ + +T
Sbjct: 379 CKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADT 438
Query: 174 VCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSY 233
V N L+ G+ E G EL ++M ++ + T L E ++
Sbjct: 439 VTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEK 498
Query: 234 VLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVF---KLDGVESRNERSRDVVLWTSML 290
+ ++ +E D+ + + +I V A +F L GV+ V + M+
Sbjct: 499 IEKSK--MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP------GVKTYNIMI 550
Query: 291 GVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
G + G E LF++M E+G PDG + +I A G VK E +
Sbjct: 551 GGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/315 (18%), Positives = 139/315 (44%), Gaps = 10/315 (3%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+ ++++ C++G LAL+ M + + + A +VN + +
Sbjct: 224 YGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMD 283
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWA 190
G +V ++L+ DA+ + ++ E+ N V +AL+ + + G
Sbjct: 284 NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 343
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+ +L +M + D FT S+ + ++ + H + L + D +V ++
Sbjct: 344 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK--HMFELMISKDCFPNVVTYNT 401
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML 310
LI+ + K V + ++F+ S+ + V +T+++ + + + +FK+M+
Sbjct: 402 LIKGFCKAKRVDEGMELFR---EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 311 EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGEL 370
+G+ PD + + ++ + G+V + FE + K+ P Y+ +++ +C+AG++
Sbjct: 459 SDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKV 517
Query: 371 QKAWELLNQTLYKGM 385
+ W+L KG+
Sbjct: 518 EDGWDLFCSLSLKGV 532
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 117/283 (41%), Gaps = 15/283 (5%)
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
+ N + F+ +I F ++G A + M ++ D + S + + ++ K
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYG 184
+ + +V + L+ + K V + +F E+ ++ NTV L+ G+
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESD 244
+A + ++M + D T S L VE + Y+ R+ +E D
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSK--MEPD 500
Query: 245 VFLQSSLIEMYGKCGLVKKAQQVF---KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKE 301
++ + +IE K G V+ +F L GV+ +VV +T+M+ + R G +E
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP------NVVTYTTMMSGFCRKGLKEE 554
Query: 302 VIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
LF+EM EEG PD + T+I A G A + M
Sbjct: 555 ADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/369 (20%), Positives = 148/369 (40%), Gaps = 20/369 (5%)
Query: 18 LSAIKKLHGNLLRTGTLFFLHDLHTNLIAAYATCLPKNHLQTLHNFFKCMNS---TNPLH 74
LS +KK+ + G + + N I A C KN L+ F + N N +
Sbjct: 241 LSLLKKMEQGKIEPGVVIY------NTIID-ALCNYKNVNDALNLFTEMDNKGIRPNVVT 293
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N +I C G A S M + + + + A + + ++++ +
Sbjct: 294 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWA 190
K +F S+L++ + + +A +F+ + K N V N L+ G+ +A
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+G+EL R+M L + T + + A E + + + D+ S
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGF--FQARECDNAQIVFKQMVSDGVLPDIMTYSI 471
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML 310
L++ G V+ A VF+ R++ D+ + M+ + GK ++ DLF +
Sbjct: 472 LLDGLCNNGKVETALVVFEY---LQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 311 EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGEL 370
+G++P+ + + T++S G F M E L P Y+ L+ R G+
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDK 587
Query: 371 QKAWELLNQ 379
+ EL+ +
Sbjct: 588 AASAELIRE 596
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 158/378 (41%), Gaps = 45/378 (11%)
Query: 49 ATCLPKNHLQTLHNFFKCM----NSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVP 104
AT K ++ N FK M S N +N++I FC G +ALT F M T
Sbjct: 178 ATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL 237
Query: 105 LDTYALCSTLTASSRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALV 164
+ + + ++ ++ G ++ + G ++ + +++ + +K+ + V
Sbjct: 238 PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFV 297
Query: 165 FDEIPEK----NTVCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAAL----R 216
E+ + + V N L+ GY + G + Q L + +M L T ++ + +
Sbjct: 298 LTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK 357
Query: 217 ACTGLSAVELGRQL---------HSY------------------VLRTTHD--IESDVFL 247
A A+E Q+ +Y VLR +D V
Sbjct: 358 AGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVT 417
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
++LI G C K + L+ ++ + S DVV ++++L + R+ E + + +
Sbjct: 418 YNALIN--GHCVTGKMEDAIAVLEDMKEKG-LSPDVVSYSTVLSGFCRSYDVDEALRVKR 474
Query: 308 EMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRA 367
EM+E+GI+PD I + ++I + +E M L P Y+ L++ C
Sbjct: 475 EMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEML-RVGLPPDEFTYTALINAYCME 533
Query: 368 GELQKAWELLNQTLYKGM 385
G+L+KA +L N+ + KG+
Sbjct: 534 GDLEKALQLHNEMVEKGV 551
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 139/335 (41%), Gaps = 40/335 (11%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+ +I + C+ G A+ M + + + + S+ +N ++ +
Sbjct: 348 YTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMN 407
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWA 190
G+S SV +AL++ + ++DA V +++ EK + V + +LSG+ +
Sbjct: 408 DNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVD 467
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+ L + R+M +K D T S+ ++ + L+ +LR + D F ++
Sbjct: 468 EALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRV--GLPPDEFTYTA 525
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSR-----DVVLWTSMLGVYGRNGKYKEVIDL 305
LI Y G ++KA Q+ NE DVV ++ ++ + + +E L
Sbjct: 526 LINAYCMEGDLEKALQL--------HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 306 FKEMLEEGIRPDGIAFLTVISACGH---------------TGQVHAGVKYFESMSNEFKL 350
++ E P + + T+I C + G + + FESM +
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGK-NH 636
Query: 351 NPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGM 385
P Y+ ++ CRAG+++KA+ TLYK M
Sbjct: 637 KPDGTAYNIMIHGHCRAGDIRKAY-----TLYKEM 666
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/322 (19%), Positives = 128/322 (39%), Gaps = 13/322 (4%)
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
S + + +N +I +C++G AL + M + + S + + + ++N +
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYG 184
+ G + + LVD +S+ + +A V E+ + + V NAL++G+
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRA-CTGLSAVELGRQLHSYVLRTTHDIES 243
G + ++ M L D + S L C E R V + I+
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK---GIKP 483
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
D SSLI+ + + K+A +++ R D +T+++ Y G ++ +
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYE---EMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDL 363
L EM+E+G+ PD + + +I+ + + + E + P Y L++
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESV-PSDVTYHTLIE- 598
Query: 364 LCRAGELQKAWELLNQTLYKGM 385
C E + L+ KGM
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGM 620
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 117/251 (46%), Gaps = 14/251 (5%)
Query: 133 VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGL 188
+G+ + V + +A+VD K + +A +F E+ EK N + N ++ + +G
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
W+ +L+R M ++ D T SA + A V +++ +LR + I
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWS--IFPTTITY 118
Query: 249 SSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKE 308
+S+I+ + K V A+++ LD + S+ S DVV +++++ Y + + +++F E
Sbjct: 119 NSMIDGFCKQDRVDDAKRM--LDSMASKG-CSPDVVTFSTLINGYCKAKRVDNGMEIFCE 175
Query: 309 MLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEH--YSCLVDLLCR 366
M GI + + + T+I G + A M P++ + C++ LC
Sbjct: 176 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM---ISCGVAPDYITFHCMLAGLCS 232
Query: 367 AGELQKAWELL 377
EL+KA+ +L
Sbjct: 233 KKELRKAFAIL 243
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 145/318 (45%), Gaps = 16/318 (5%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYA---LCSTLTASSRVNDVNFGKQIHA 131
+NV+++ C++G A+ + M ++ + + ++ ++ R D +++ A
Sbjct: 277 YNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD---AEKLLA 333
Query: 132 HVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAG 187
+ + G+S SV + L++ + + A + +++P+ N++ N LL G+ +
Sbjct: 334 DMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEK 393
Query: 188 LWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFL 247
+ +E + +M D T + L A VE ++ + + ++ +
Sbjct: 394 KMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL--SSKGCSPVLIT 451
Query: 248 QSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFK 307
+++I+ K G KA ++ LD + +++ + D + ++S++G R GK E I F
Sbjct: 452 YNTVIDGLAKAGKTGKAIKL--LDEMRAKDLKP-DTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 308 EMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRA 367
E GIRP+ + F +++ + Q + + M N P Y+ L++ L
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINR-GCKPNETSYTILIEGLAYE 567
Query: 368 GELQKAWELLNQTLYKGM 385
G ++A ELLN+ KG+
Sbjct: 568 GMAKEALELLNELCNKGL 585
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/364 (19%), Positives = 144/364 (39%), Gaps = 42/364 (11%)
Query: 73 LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAH 132
+ +NV+IS +C+ G AL+ M + + + +L S ++ ++
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQ---AMEVLDR 229
Query: 133 VGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGL 188
+ + V + L++ + S V A + DE+ ++ + V N L++G + G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 189 WAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQ 248
+ ++ + MP + + T + LR+ +L + +LR V
Sbjct: 290 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLR--KGFSPSVVTF 347
Query: 249 SSLIEMYGKCGLVKKAQQVF--------------------------KLDGVESRNER--S 280
+ LI + GL+ +A + K+D ER S
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 281 R----DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHA 336
R D+V + +ML ++GK ++ +++ ++ +G P I + TVI G+
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 337 GVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGAL 396
+K + M + L P YS LV L R G++ +A + ++ G+ ++ +
Sbjct: 468 AIKLLDEMRAK-DLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIM 526
Query: 397 LNAC 400
L C
Sbjct: 527 LGLC 530
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 9/142 (6%)
Query: 244 DVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
DV + +I Y K G + A V R S DVV + ++L +GK K+ +
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVL------DRMSVSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 304 DLFKEMLEEGIRPDGIAFLTVISA-CGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVD 362
++ ML+ PD I + +I A C +G HA +K + M + P Y+ LV+
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHA-MKLLDEMRDR-GCTPDVVTYNVLVN 282
Query: 363 LLCRAGELQKAWELLNQTLYKG 384
+C+ G L +A + LN G
Sbjct: 283 GICKEGRLDEAIKFLNDMPSSG 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 106/244 (43%), Gaps = 15/244 (6%)
Query: 146 SALVDLYSKLSSVKDAALVFDEIPE-----KNTVCANALLSGYGEAGLWAQGLELVRKMP 200
+ L+ + +L + AA + EI E + + N ++SGY +AG L ++ +M
Sbjct: 141 TTLIRGFCRLGKTRKAAKIL-EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS 199
Query: 201 VLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGL 260
V D T + LR+ ++ ++ +L+ D DV + LIE +
Sbjct: 200 V---SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQ--RDCYPDVITYTILIEATCRDSG 254
Query: 261 VKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIA 320
V A ++ LD + R + DVV + ++ + G+ E I +M G +P+ I
Sbjct: 255 VGHAMKL--LDEMRDRG-CTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
Query: 321 FLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQT 380
++ + TG+ K M + +P ++ L++ LCR G L +A ++L +
Sbjct: 312 HNIILRSMCSTGRWMDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 381 LYKG 384
G
Sbjct: 371 PQHG 374
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 114/241 (47%), Gaps = 16/241 (6%)
Query: 146 SALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWAQGLELVRKMPV 201
S ++D K S+ +A +F+E+ K + + N L+ G+ AG W G +L+R M
Sbjct: 267 SIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK 326
Query: 202 LRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLV 261
++ + T S + + + QL +++ I + +SLI+ + K +
Sbjct: 327 RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ--RGIAPNTITYNSLIDGFCKENRL 384
Query: 262 KKAQQVFKL---DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDG 318
++A Q+ L G + D++ + ++ Y + + + ++LF+EM G+ +
Sbjct: 385 EEAIQMVDLMISKGCDP------DIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 319 IAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLN 378
+ + T++ +G++ K F+ M + ++ P Y L+D LC GEL+KA E+
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSR-RVRPDIVSYKILLDGLCDNGELEKALEIFG 497
Query: 379 Q 379
+
Sbjct: 498 K 498
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 148/341 (43%), Gaps = 13/341 (3%)
Query: 75 FNVIISNFCR-KGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHV 133
+++I+ FCR + + T M P DT + L V+ ++ +
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEP-DTVIFNTLLNGLCLECRVSEALELVDRM 184
Query: 134 GKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAGLW 189
++G ++ + LV+ V DA ++ D + E N V +L+ ++G
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 190 AQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQS 249
A +EL+RKM +K D S + +++ L + + ++D+ +
Sbjct: 245 ALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM--EIKGFKADIITYN 302
Query: 250 SLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEM 309
+LI + G ++ + D + + + S +VV ++ ++ + + GK +E L KEM
Sbjct: 303 TLIGGFCNAGRWDDGAKLLR-DMI--KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 310 LEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGE 369
++ GI P+ I + ++I ++ ++ + M ++ +P ++ L++ C+A
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK-GCDPDIMTFNILINGYCKANR 418
Query: 370 LQKAWELLNQTLYKGMGNCTISMWGALLNACVDCGNIELGK 410
+ EL + +G+ T++ + L+ G +E+ K
Sbjct: 419 IDDGLELFREMSLRGVIANTVT-YNTLVQGFCQSGKLEVAK 458
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/336 (19%), Positives = 141/336 (41%), Gaps = 24/336 (7%)
Query: 62 NFFKCMNSTNPL----HFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTAS 117
+ F+ M + PL FN + S + L L M + + Y L +
Sbjct: 74 DLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCF 133
Query: 118 SRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNT 173
R +++ + KLG+ + + L++ V +A + D + E
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 174 VCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRAC-----TGLSAVELGR 228
+ N L++G G + + L+ +M + ++ T L T L A+EL R
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL-AMELLR 252
Query: 229 QLHSYVLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTS 288
++ +I+ D S +I+ K G + A +F + +E + ++ D++ + +
Sbjct: 253 KMEE------RNIKLDAVKYSIIIDGLCKDGSLDNAFNLF--NEMEIKGFKA-DIITYNT 303
Query: 289 MLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEF 348
++G + G++ + L ++M++ I P+ + F +I + G++ + + M
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR- 362
Query: 349 KLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKG 384
+ P Y+ L+D C+ L++A ++++ + KG
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/335 (21%), Positives = 139/335 (41%), Gaps = 26/335 (7%)
Query: 58 QTLHNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTAS 117
+ L + K S N + F+V+I +F ++G A M + +T S +
Sbjct: 319 KLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Query: 118 SRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NT 173
+ N + Q+ + G + + L++ Y K + + D +F E+ + NT
Sbjct: 379 CKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANT 438
Query: 174 VCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSY 233
V N L+ G+ ++G +L ++M R++ D + L +E ++
Sbjct: 439 VTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGK 498
Query: 234 VLRTTHDIESDVFLQSSLIEMYGKCGL--VKKAQQVF---KLDGVESRNERSRDVVLWTS 288
+ ++ +++ +++ I ++G C V A +F L GV+ D +
Sbjct: 499 IEKSKMELDIGIYM----IIIHGMCNASKVDDAWDLFCSLPLKGVK------LDARAYNI 548
Query: 289 MLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEF 348
M+ R + LF++M EEG PD + + +I A H G A + E
Sbjct: 549 MISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA--HLGDDDATTA--AELIEEM 604
Query: 349 KLNPGPEHYSC--LVDLLCRAGELQKAW-ELLNQT 380
K + P S +V + +GEL K++ ++L+ T
Sbjct: 605 KSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTT 639
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 143/355 (40%), Gaps = 45/355 (12%)
Query: 69 STNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQ 128
S N + + ++I C+ G + A + + + S + + ++ G
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 129 IHAHVGKLGWSSSVFVGSALVDLYSK----LSSVKDAALVFDEIPEKNTVCANALLSGYG 184
++ + K+G+ V + LVD SK L +++ + + + N V N+L+ G+
Sbjct: 448 LYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 185 EAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAV------ELGRQLHSYVLRTT 238
+ + L++ R M + +K D T + +R A +G QL + R
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQR-- 565
Query: 239 HDIESDVFLQSSLIEMYGKCGLVKKAQQVF--------------------------KLDG 272
+ I +D+ + + +I + KC ++ A + F +LD
Sbjct: 566 NKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE 625
Query: 273 VESRNERSR------DVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVIS 326
E E + + V T ++ V +N I +F M E+G +P+ + + ++
Sbjct: 626 AERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMD 685
Query: 327 ACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTL 381
+ + K FE M E ++P YS ++D LC+ G + +A + +Q +
Sbjct: 686 WFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI 739
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 137/329 (41%), Gaps = 27/329 (8%)
Query: 83 CRKGFPFLALTAFSFMHTNNV--PLDT-YALCSTLTASSRVNDV--NFGKQIHAHVGKLG 137
CR G AL F + V P D+ Y + ++L S RV+ + +F K + G
Sbjct: 157 CRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSG 216
Query: 138 WSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEKNTVCANALLSGYGEAGLWAQGLELVR 197
S+ FV AL ++ LV + V N +L G L +E+
Sbjct: 217 VSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKG-----LSVDQIEVAS 271
Query: 198 KMPVLRLKYDQFTLSAALRACTGLSAV----ELGRQLHSYVLRTTHDIESDVFLQSSLIE 253
++ L L D + CT ++ E+ R + + IE D+ S+LI+
Sbjct: 272 RL--LSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLID 329
Query: 254 MYGKCGLVKKAQQVFKL---DGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML 310
Y K G++ ++F GV+ DVV+++S + VY ++G ++K ML
Sbjct: 330 GYFKAGMLGMGHKLFSQALHKGVK------LDVVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 311 EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGEL 370
+GI P+ + + +I G+++ + + + P YS L+D C+ G L
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-GMEPSIVTYSSLIDGFCKCGNL 442
Query: 371 QKAWELLNQTLYKGMGNCTISMWGALLNA 399
+ + L + G + ++G L++
Sbjct: 443 RSGFALYEDMIKMGYPP-DVVIYGVLVDG 470
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 147/372 (39%), Gaps = 50/372 (13%)
Query: 67 MNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFG 126
M N + FN++IS +C + ++ + D + + V+
Sbjct: 243 MKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEA 302
Query: 127 KQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSG 182
++ V G V + LV Y L ++ A F E+ K N N L++G
Sbjct: 303 LEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAG 362
Query: 183 YGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACT-------GLSAVEL--------G 227
Y + G+ L+ M ++++ T + +R + GL +E+ G
Sbjct: 363 YCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHG 422
Query: 228 RQLHSY-------------------VLRTTHDIESDVFLQSSLIEMYGKCGL--VKKA-Q 265
++ Y +L+ V LI + K G+ +K A
Sbjct: 423 ARIDPYNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYD 482
Query: 266 QVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVI 325
Q+ GV S +++ ++ Y ++GK +E ++L +M+ G P F VI
Sbjct: 483 QMIGEGGVPS-------IIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVI 535
Query: 326 SACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGELQKAWELLNQTLYKGM 385
+V G+K+ E M+ E P E Y+ L++ LC G++QKAW L ++ + K +
Sbjct: 536 IGFCKQDKVMNGIKFVEDMA-ERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSI 594
Query: 386 GNCTISMWGALL 397
SMW +L+
Sbjct: 595 VP-DPSMWSSLM 605
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 129/315 (40%), Gaps = 46/315 (14%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N++ + C+ G LA F M ++ V + L +++ + ++F +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAGLWA 190
++ V ++L++ KL V+DA +FDE +T N L+ G G
Sbjct: 166 EV--EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+ LEL+ M + E D+ ++
Sbjct: 224 KALELLGVM-------------------------------------SGFGCEPDIVTYNT 246
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML 310
LI+ + K + KA ++FK V+S + S DVV +TSM+ Y + GK +E L +ML
Sbjct: 247 LIQGFCKSNELNKASEMFK--DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 311 EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGEL 370
GI P + F ++ G++ + M + F P ++ L+D CR G++
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS-FGCFPDVVTFTSLIDGYCRVGQV 363
Query: 371 QKAWELLNQTLYKGM 385
+ + L + +GM
Sbjct: 364 SQGFRLWEEMNARGM 378
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 135/345 (39%), Gaps = 16/345 (4%)
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV 120
H F+ N T FN++I C G AL M D + + +
Sbjct: 197 HLRFQSCNDTKT--FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS 254
Query: 121 NDVNFGKQIHAHVGKLG--WSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTV 174
N++N ++ V K G S V ++++ Y K +++A+ + D++ V
Sbjct: 255 NELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV 313
Query: 175 CANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYV 234
N L+ GY +AG E+ KM D T ++ + + V G +L +
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 235 LRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYG 294
+ + F S LI + KA+++ G + + ++ ++ +
Sbjct: 374 --NARGMFPNAFTYSILINALCNENRLLKARELL---GQLASKDIIPQPFMYNPVIDGFC 428
Query: 295 RNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGP 354
+ GK E + +EM ++ +PD I F +I G++ V F M +P
Sbjct: 429 KAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV-AIGCSPDK 487
Query: 355 EHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
S L+ L +AG ++A+ LNQ KG N + + NA
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNVVPLETKTANA 531
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 129/315 (40%), Gaps = 46/315 (14%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+N++ + C+ G LA F M ++ V + L +++ + ++F +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQSF 165
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTVCANALLSGYGEAGLWA 190
++ V ++L++ KL V+DA +FDE +T N L+ G G
Sbjct: 166 EV--EGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAE 223
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+ LEL+ M + E D+ ++
Sbjct: 224 KALELLGVM-------------------------------------SGFGCEPDIVTYNT 246
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML 310
LI+ + K + KA ++FK V+S + S DVV +TSM+ Y + GK +E L +ML
Sbjct: 247 LIQGFCKSNELNKASEMFK--DVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDML 304
Query: 311 EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGEL 370
GI P + F ++ G++ + M + F P ++ L+D CR G++
Sbjct: 305 RLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS-FGCFPDVVTFTSLIDGYCRVGQV 363
Query: 371 QKAWELLNQTLYKGM 385
+ + L + +GM
Sbjct: 364 SQGFRLWEEMNARGM 378
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 135/345 (39%), Gaps = 16/345 (4%)
Query: 61 HNFFKCMNSTNPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRV 120
H F+ N T FN++I C G AL M D + + +
Sbjct: 197 HLRFQSCNDTKT--FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKS 254
Query: 121 NDVNFGKQIHAHVGKLG--WSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNTV 174
N++N ++ V K G S V ++++ Y K +++A+ + D++ V
Sbjct: 255 NELNKASEMFKDV-KSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNV 313
Query: 175 CANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYV 234
N L+ GY +AG E+ KM D T ++ + + V G +L +
Sbjct: 314 TFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEM 373
Query: 235 LRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYG 294
+ + F S LI + KA+++ G + + ++ ++ +
Sbjct: 374 --NARGMFPNAFTYSILINALCNENRLLKARELL---GQLASKDIIPQPFMYNPVIDGFC 428
Query: 295 RNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGP 354
+ GK E + +EM ++ +PD I F +I G++ V F M +P
Sbjct: 429 KAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV-AIGCSPDK 487
Query: 355 EHYSCLVDLLCRAGELQKAWELLNQTLYKGMGNCTISMWGALLNA 399
S L+ L +AG ++A+ LNQ KG N + + NA
Sbjct: 488 ITVSSLLSCLLKAGMAKEAYH-LNQIARKGQSNNVVPLETKTANA 531
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/321 (18%), Positives = 137/321 (42%), Gaps = 10/321 (3%)
Query: 75 FNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIHAHVG 134
+ +++ C++G LAL+ M + D + + + ++ + +
Sbjct: 226 YGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMD 285
Query: 135 KLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEAGLWA 190
G VF S+L+ DA+ + ++ E+ N V +AL+ + + G
Sbjct: 286 NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLV 345
Query: 191 QGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVFLQSS 250
+ +L +M + D FT S+ + ++ + H + L + D +V S+
Sbjct: 346 EAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK--HMFELMISKDCFPNVVTYST 403
Query: 251 LIEMYGKCGLVKKAQQVFKLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVIDLFKEML 310
LI+ + K V++ ++F+ S+ + V +T+++ + + +FK+M+
Sbjct: 404 LIKGFCKAKRVEEGMELFR---EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 311 EEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNPGPEHYSCLVDLLCRAGEL 370
G+ P+ + + ++ G++ + FE + + P Y+ +++ +C+AG++
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKV 519
Query: 371 QKAWELLNQTLYKGMGNCTIS 391
+ WEL KG+ I+
Sbjct: 520 EDGWELFCNLSLKGVSPNVIA 540
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/331 (20%), Positives = 135/331 (40%), Gaps = 16/331 (4%)
Query: 62 NFFKCMNSTNP----LHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTAS 117
+ F M + P + FN ++S + L ++ M T + D Y +
Sbjct: 69 DLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCF 128
Query: 118 SRVNDVNFGKQIHAHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPE----KNT 173
R + ++ + A + KLG+ + S+L++ Y + DA + D++ E +T
Sbjct: 129 CRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDT 188
Query: 174 VCANALLSGYGEAGLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSY 233
L+ G ++ + LV +M + D T + ++L L
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 234 VLRTTHDIESDVFLQSSLIEMYGKCGLVKKAQQVFKLDGVESRNERSR-DVVLWTSMLGV 292
+ + IE+DV + +++I+ K + A +F E N+ R DV ++S++
Sbjct: 249 MEKGK--IEADVVIYNTIIDGLCKYKHMDDALNLF----TEMDNKGIRPDVFTYSSLISC 302
Query: 293 YGRNGKYKEVIDLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESMSNEFKLNP 352
G++ + L +M+E I P+ + F +I A G++ K ++ M ++P
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDP 361
Query: 353 GPEHYSCLVDLLCRAGELQKAWELLNQTLYK 383
YS L++ C L +A + + K
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISK 392
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/281 (20%), Positives = 118/281 (41%), Gaps = 15/281 (5%)
Query: 71 NPLHFNVIISNFCRKGFPFLALTAFSFMHTNNVPLDTYALCSTLTASSRVNDVNFGKQIH 130
N + F+ +I F ++G A + M ++ D + S + + ++ K +
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 131 AHVGKLGWSSSVFVGSALVDLYSKLSSVKDAALVFDEIPEK----NTVCANALLSGYGEA 186
+ +V S L+ + K V++ +F E+ ++ NTV L+ G+ +A
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 187 GLWAQGLELVRKMPVLRLKYDQFTLSAALRACTGLSAVELGRQLHSYVLRTTHDIESDVF 246
+ ++M + + + T + L + + Y+ R+T +E D++
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRST--MEPDIY 504
Query: 247 LQSSLIEMYGKCGLVKKAQQVF---KLDGVESRNERSRDVVLWTSMLGVYGRNGKYKEVI 303
+ +IE K G V+ ++F L GV S +V+ + +M+ + R G +E
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGV------SPNVIAYNTMISGFCRKGSKEEAD 558
Query: 304 DLFKEMLEEGIRPDGIAFLTVISACGHTGQVHAGVKYFESM 344
L K+M E+G P+ + T+I A G A + + M
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599