Miyakogusa Predicted Gene

Lj1g3v3343950.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3343950.1 tr|C7IZQ1|C7IZQ1_ORYSJ Os03g0250000 protein
OS=Oryza sativa subsp. japonica GN=Os03g0250000 PE=4
SV=,61.11,2e-17,EF_HAND_1,EF-Hand 1, calcium-binding site; seg,NULL;
EF-hand, calcium binding motif,Calcium-binding ,CUFF.30505.1
         (369 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G38810.2 | Symbols:  | Calcium-binding EF-hand family protein...   480   e-136
AT4G38810.1 | Symbols:  | Calcium-binding EF-hand family protein...   311   5e-85
AT5G28830.1 | Symbols:  | calcium-binding EF hand family protein...    74   1e-13
AT2G44310.1 | Symbols:  | Calcium-binding EF-hand family protein...    51   1e-06

>AT4G38810.2 | Symbols:  | Calcium-binding EF-hand family protein |
           chr4:18115607-18118860 REVERSE LENGTH=375
          Length = 375

 Score =  480 bits (1235), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 240/350 (68%), Positives = 284/350 (81%), Gaps = 3/350 (0%)

Query: 7   NPKRKSGEVLDGSNIMELVGNEQVFNNFVDHKFHQLDKDKDGKLSVKELEPAVADIGAAL 66
           N  ++  +VLDGS+I+ELV NE+VF+ FV+ KF QLD+D+DGKLSV EL+PAVADIGAAL
Sbjct: 6   NNHQQQQQVLDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADIGAAL 65

Query: 67  GLPAQGTSPDSDHIYYEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRM 126
           GLPAQGTSPDSDHIY EVLNEFTHG QEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRM
Sbjct: 66  GLPAQGTSPDSDHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRM 125

Query: 127 DGEDLLEFVDGPSYEPEMVSLFSEIDNPTE-SLREHIIKALKRLAVDRGVPPTSDSWVFN 185
           DGEDL EFV GP YE E +S+FSE+ +  + SLR+ I+KAL+ L+VD G+PP++D WV +
Sbjct: 126 DGEDLSEFVHGPGYEIESISVFSELSSSKDASLRDCIVKALQSLSVDHGMPPSNDPWVMS 185

Query: 186 NIVDPALVS--QAGPAWDKPVTQETFLEEFKKVALSVVNCLKEKPVIVAHSENTFDGSGV 243
           NIV+P + S        +K  +QE FLE FK+V  SV   L E+PVIVAHSENTFDGSG+
Sbjct: 186 NIVEPIVDSCLDEEDKREKSASQERFLEAFKRVVESVAQRLNEQPVIVAHSENTFDGSGI 245

Query: 244 KRLLSNKFELDKTLNSALENLPKDRNGKLSKDYLRVALDVVSPSAGLPPVGAIEEMDKVI 303
           +RLLSNKFE DK LN A+E +PKDR GK+SK YLR  LD V+PSA LPP+GA+ +MD +I
Sbjct: 246 RRLLSNKFEFDKALNVAMETIPKDRQGKVSKGYLRAVLDTVAPSATLPPIGAVSQMDNMI 305

Query: 304 SEACKMVNADDTKTVKEDEFKKVLTEILGSIMLQLGGNPISVNSNSVVHE 353
            EA KMVN DD   VKE+EFKK + EILGSIMLQL G+PISV+SNSVVHE
Sbjct: 306 MEALKMVNGDDGNVVKEEEFKKTMAEILGSIMLQLEGSPISVSSNSVVHE 355


>AT4G38810.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr4:18115607-18116999 REVERSE LENGTH=265
          Length = 265

 Score =  311 bits (797), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 157/245 (64%), Positives = 190/245 (77%), Gaps = 3/245 (1%)

Query: 112 MAAGLKRDPIVILRMDGEDLLEFVDGPSYEPEMVSLFSEIDNPTE-SLREHIIKALKRLA 170
           MAAGLKRDPIVILRMDGEDL EFV GP YE E +S+FSE+ +  + SLR+ I+KAL+ L+
Sbjct: 1   MAAGLKRDPIVILRMDGEDLSEFVHGPGYEIESISVFSELSSSKDASLRDCIVKALQSLS 60

Query: 171 VDRGVPPTSDSWVFNNIVDPALVS--QAGPAWDKPVTQETFLEEFKKVALSVVNCLKEKP 228
           VD G+PP++D WV +NIV+P + S        +K  +QE FLE FK+V  SV   L E+P
Sbjct: 61  VDHGMPPSNDPWVMSNIVEPIVDSCLDEEDKREKSASQERFLEAFKRVVESVAQRLNEQP 120

Query: 229 VIVAHSENTFDGSGVKRLLSNKFELDKTLNSALENLPKDRNGKLSKDYLRVALDVVSPSA 288
           VIVAHSENTFDGSG++RLLSNKFE DK LN A+E +PKDR GK+SK YLR  LD V+PSA
Sbjct: 121 VIVAHSENTFDGSGIRRLLSNKFEFDKALNVAMETIPKDRQGKVSKGYLRAVLDTVAPSA 180

Query: 289 GLPPVGAIEEMDKVISEACKMVNADDTKTVKEDEFKKVLTEILGSIMLQLGGNPISVNSN 348
            LPP+GA+ +MD +I EA KMVN DD   VKE+EFKK + EILGSIMLQL G+PISV+SN
Sbjct: 181 TLPPIGAVSQMDNMIMEALKMVNGDDGNVVKEEEFKKTMAEILGSIMLQLEGSPISVSSN 240

Query: 349 SVVHE 353
           SVVHE
Sbjct: 241 SVVHE 245


>AT5G28830.1 | Symbols:  | calcium-binding EF hand family protein |
           chr5:10856801-10858394 FORWARD LENGTH=324
          Length = 324

 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 135/299 (45%), Gaps = 30/299 (10%)

Query: 56  EPAVADIGAALGLP------AQGTSPDSDHIYYEVLNEFTHGKQEKVSKTEFKEVLSDIL 109
           E  V+   + L LP      A     D DH+ +         ++   +K +  E L    
Sbjct: 39  ESKVSQSLSGLSLPPHLKETAISQVSDGDHVTF---------RRTMFNKQQASEKLGVFF 89

Query: 110 LGMAAGLKRDPIVILRMDGEDLLEFV-DGPSYEPEMVSLFSEIDNPTES--LREHIIKAL 166
             +A  LK  PIV+  +DG  L  F+ D   +     +LF+++D   +    +  I KAL
Sbjct: 90  STVADALKDTPIVVSILDGTMLKMFLEDEDDFAMLAENLFTDLDEEDKGKLCKSEIRKAL 149

Query: 167 KRLAVDRGVPPTSDSWVFNNIVDPALVSQAGPAWDKPVTQETFLEEFKKVALSVVNCLKE 226
             + V+ GVPP S+  + ++I+      +     D+ + Q  F E  ++V   + + L E
Sbjct: 150 VHMGVEMGVPPLSEFPILDDII-----KKHDADSDEELGQAQFAELLQQVLQEIADVLHE 204

Query: 227 KPVIVAHSENTFDGSGVKRLLSNKFELDKTLNSALE-NLPKDRNGKLSKDYLRVALDVVS 285
           KP+ +  +   F GS ++++L++    +KTL   +E  + ++ NGK S+ +LR  +    
Sbjct: 205 KPITIVLNVEIFTGSRIRKILAD----EKTLKCLVEKTILEESNGKESQGWLRTLIIKNG 260

Query: 286 PSAGLPPVGAIEEMDKVISEA-CKMVNADDTKTVKEDEFKKVLTEILGSIMLQLGGNPI 343
              GLPP+ +  E   ++ E     +N  +  + KE EF   L +IL      L   P+
Sbjct: 261 KELGLPPLSSENEQVALLYETIISQLNNKENASTKE-EFMDALKDILKKFEELLETTPV 318


>AT2G44310.1 | Symbols:  | Calcium-binding EF-hand family protein |
           chr2:18309285-18309713 FORWARD LENGTH=142
          Length = 142

 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 3/119 (2%)

Query: 15  VLDGSNIMELVGNEQVFNNFVDHKFHQLDKDKDGKLSVKELEPAVADIG---AALGLPAQ 71
           ++DGS +   V +E+ F   VD +F  LD +KDG LS  EL  A   +    +  G+   
Sbjct: 5   LIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFGVDVV 64

Query: 72  GTSPDSDHIYYEVLNEFTHGKQEKVSKTEFKEVLSDILLGMAAGLKRDPIVILRMDGED 130
               +  ++Y  +  +F   +   V   EF+  +  I+L +A GL   PI ++  D +D
Sbjct: 65  TPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDDDDD 123