Miyakogusa Predicted Gene
- Lj1g3v3343860.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3343860.1 tr|G7J729|G7J729_MEDTR Telomeric repeat-binding
factor OS=Medicago truncatula GN=MTR_3g116690 PE=4
S,28.14,1e-18,Myb_DNA-binding,SANT/Myb domain; SANT SWI3, ADA2, N-CoR
and TFIIIB'' DNA-bin,SANT/Myb domain; HTH_M,CUFF.30497.1
(340 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G15720.1 | Symbols: TRFL5 | TRF-like 5 | chr1:5406138-5407310... 87 1e-17
AT5G58340.2 | Symbols: | myb-like HTH transcriptional regulator... 56 4e-08
AT5G58340.1 | Symbols: | myb-like HTH transcriptional regulator... 56 4e-08
AT1G06910.1 | Symbols: TRFL7 | TRF-like 7 | chr1:2121099-2122914... 53 3e-07
AT1G17460.1 | Symbols: TRFL3 | TRF-like 3 | chr1:5999519-6002546... 48 8e-06
AT1G17460.2 | Symbols: TRFL3 | TRF-like 3 | chr1:5999519-6002546... 48 8e-06
>AT1G15720.1 | Symbols: TRFL5 | TRF-like 5 | chr1:5406138-5407310
FORWARD LENGTH=390
Length = 390
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 135/315 (42%), Gaps = 66/315 (20%)
Query: 79 SPVSASFTAAYCAVAVECTLKYI-KLEGSIPRYFDSVKTIWWKRVMNMKPSPGGEKRSLL 137
S + S +AYC AVECTL+++ + S + D+++ IW R+ +K EK S L
Sbjct: 79 SVIMGSLKSAYCWTAVECTLRFMWPVNASDGFFGDALERIWRNRIGTLK-----EKESDL 133
Query: 138 FSDELDRWRIDIEASLNDPCVRDRLAATENTRSVAINRLKVFFAELWEGVDPSFLEL--- 194
+ EL +W D+ + +P + ++ T N R AI+ L E W + S LE
Sbjct: 134 VTRELLKWESDLNKAFEEPEIYQKIRET-NIRYNAISHLNQLLKEQWALLGCSSLESEAR 192
Query: 195 -----------------------------AVEN-----AATDAAEEQQRETQEGNLL--- 217
VEN + +E + +G +L
Sbjct: 193 KRFLKRKDSPYASRRGGNREKANDVEEVGGVENPDGVGKVNEHEQEHEPSLNKGEMLVAR 252
Query: 218 -LDDIC---------ITNVVEEMDPSTTCQSDVPP-----TTTNAHAHEGETSNR---PQ 259
L D IT +E + + DV P T+A EG +S+R P
Sbjct: 253 ELKDFLLEIQRLIDPITRQDQEPNNAMEHSVDVTPQPDGANRTDAEDSEGTSSSRRVRPH 312
Query: 260 LPSPKRKRVSPLKKYEPRNVIKRRTTRKWSQLEEETLEKAVNKFGIGNWKLMLNAHKDVF 319
LP+P+ VSPLKK RR + W+ E L + V ++G +WK + N++ VF
Sbjct: 313 LPTPEPLNVSPLKKGRLERPRPRRPMKFWTSEEVAALREGVKEYG-KSWKDIKNSYPVVF 371
Query: 320 ERRTDGDLKDKWRNM 334
R++ DLKDKWRN+
Sbjct: 372 ADRSEVDLKDKWRNL 386
>AT5G58340.2 | Symbols: | myb-like HTH transcriptional regulator
family protein | chr5:23582607-23584245 FORWARD
LENGTH=448
Length = 448
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 257 RPQLPSPKRKRVSPLKKYEPRNVIKRRTTRKWSQLEEETLEKAVNKFGIGNWKLMLNAHK 316
RP+ P+P VSPLKK RR + W E E L + V ++G +WK + N +
Sbjct: 369 RPRRPTPVTLSVSPLKKGGLAKPHVRRPKKFWKPEEVEALREGVKEYG-KSWKDIKNGNP 427
Query: 317 DVFERRTDGDLKDKWRNM 334
VF RT+ DLKDKWRN+
Sbjct: 428 TVFAERTEVDLKDKWRNL 445
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 84 SFTAAYCAVAVECTLKYI-KLEGSIPRYFDSVKTIWWKRVMNMKPSPGGEKRSLLFSDEL 142
S +AYC A ECTL+++ + S + D+++ IW KR+ +K E S L + +L
Sbjct: 84 SHKSAYCWTATECTLRFMWPMFASDGLFTDALERIWTKRIGILK-----ESGSDLVTCDL 138
Query: 143 DRWRIDIEASLNDPCVRDRLAATENTRSVAINRLKVFFAELWEGVDPSFLE 193
+W D++ +L DP + R+ T N R AI+ L E W + S LE
Sbjct: 139 LKWESDLKKALGDPELYQRIRET-NIRYTAISFLTQLLKEQWALLGSSSLE 188
>AT5G58340.1 | Symbols: | myb-like HTH transcriptional regulator
family protein | chr5:23582607-23584245 FORWARD
LENGTH=448
Length = 448
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 257 RPQLPSPKRKRVSPLKKYEPRNVIKRRTTRKWSQLEEETLEKAVNKFGIGNWKLMLNAHK 316
RP+ P+P VSPLKK RR + W E E L + V ++G +WK + N +
Sbjct: 369 RPRRPTPVTLSVSPLKKGGLAKPHVRRPKKFWKPEEVEALREGVKEYG-KSWKDIKNGNP 427
Query: 317 DVFERRTDGDLKDKWRNM 334
VF RT+ DLKDKWRN+
Sbjct: 428 TVFAERTEVDLKDKWRNL 445
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 84 SFTAAYCAVAVECTLKYI-KLEGSIPRYFDSVKTIWWKRVMNMKPSPGGEKRSLLFSDEL 142
S +AYC A ECTL+++ + S + D+++ IW KR+ +K E S L + +L
Sbjct: 84 SHKSAYCWTATECTLRFMWPMFASDGLFTDALERIWTKRIGILK-----ESGSDLVTCDL 138
Query: 143 DRWRIDIEASLNDPCVRDRLAATENTRSVAINRLKVFFAELWEGVDPSFLE 193
+W D++ +L DP + R+ T N R AI+ L E W + S LE
Sbjct: 139 LKWESDLKKALGDPELYQRIRET-NIRYTAISFLTQLLKEQWALLGSSSLE 188
>AT1G06910.1 | Symbols: TRFL7 | TRF-like 7 | chr1:2121099-2122914
FORWARD LENGTH=390
Length = 390
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 73 VLRSEGSPVSASFTAAYCAVAVECTLKYIKLEGSIPR-YFDSVKTIWWKRVMNMKPSPGG 131
+L EGS V S T AYC VAVECT+K + E + Y +++KTIW R+M P
Sbjct: 37 ILHKEGSKVPKSVTEAYCKVAVECTVKCLAYEKDAKKAYTEAIKTIWLGRIM-----PLC 91
Query: 132 EKRSLLFSDEL 142
+K S L + +L
Sbjct: 92 DKVSCLVTLDL 102
>AT1G17460.1 | Symbols: TRFL3 | TRF-like 3 | chr1:5999519-6002546
FORWARD LENGTH=604
Length = 604
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 282 RRTTRKWSQLEEETLEKAVNKFGIGNWKLMLNAHKDVFERRTDGDLKDKWRNMRRCRS 339
R+ R W+ E E L + V+K+G+G W + + RT DLKDKWRN+++ S
Sbjct: 493 RKLHRAWTISEVEKLVEGVSKYGVGKWTEIKKLSFSPYTHRTTVDLKDKWRNLQKASS 550
>AT1G17460.2 | Symbols: TRFL3 | TRF-like 3 | chr1:5999519-6002546
FORWARD LENGTH=624
Length = 624
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 282 RRTTRKWSQLEEETLEKAVNKFGIGNWKLMLNAHKDVFERRTDGDLKDKWRNMRRCRS 339
R+ R W+ E E L + V+K+G+G W + + RT DLKDKWRN+++ S
Sbjct: 513 RKLHRAWTISEVEKLVEGVSKYGVGKWTEIKKLSFSPYTHRTTVDLKDKWRNLQKASS 570