Miyakogusa Predicted Gene

Lj1g3v3331710.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3331710.1 Non Chatacterized Hit- tr|I1LZE0|I1LZE0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.34737
PE,44.57,4e-18,seg,NULL; Myb_DNA-bind_4,NULL; FAMILY NOT NAMED,NULL;
coiled-coil,NULL,CUFF.30486.1
         (451 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G21200.1 | Symbols:  | sequence-specific DNA binding transcri...   264   7e-71
AT1G76870.1 | Symbols:  | BEST Arabidopsis thaliana protein matc...   226   3e-59
AT3G10040.1 | Symbols:  | sequence-specific DNA binding transcri...    93   5e-19

>AT1G21200.1 | Symbols:  | sequence-specific DNA binding
           transcription factors | chr1:7421483-7422814 FORWARD
           LENGTH=443
          Length = 443

 Score =  264 bits (675), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 159/363 (43%), Positives = 221/363 (60%), Gaps = 37/363 (10%)

Query: 85  NDLSEDDELGYAEDG-NCEHLDGGKSKKGSTWQRMKWTDNIVGLLVAVVSCVDDDGTIGA 143
           N +S+DDE  + E+G +  H +  +S KGS WQR+KWTD +V LL+  VS +   G   +
Sbjct: 83  NSVSDDDEPSFTEEGGDGVHNEANRSTKGSPWQRVKWTDKMVKLLITAVSYI---GDDSS 139

Query: 144 GMERAKRKYGALQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEILGRGTC 203
               ++RK+  LQKKGKWK+VSK+M  +G HVSPQQCEDKFNDLNKRYK+LN++LGRGT 
Sbjct: 140 IDSSSRRKFAVLQKKGKWKSVSKVMAERGYHVSPQQCEDKFNDLNKRYKKLNDMLGRGTS 199

Query: 204 CQVVENPALLDSMPNLSAKMKDAVRKILSSKHLFYKEMCAYHNGQRLPNSYDLDLHGYSL 263
           CQVVENPALLDS+  L+ K KD VRKI+SSKHLFY+EMC+YHNG RL   +DL L   SL
Sbjct: 200 CQVVENPALLDSIGYLNDKEKDDVRKIMSSKHLFYEEMCSYHNGNRLHLPHDLALQ-RSL 258

Query: 264 E---------HGRDSRXXXXXXXXXXXXXXXXXXXVDNEININARGD---------GGRM 305
           +            DSR                    + E    A GD         GG +
Sbjct: 259 QLALRSRDDHDNDDSRKHQMEDLDDEDHDGDGDEHDEYEEQHYAYGDCRVNHYGGGGGPL 318

Query: 306 EELCDRNKQSEEDGHFWPRSV-----------RMDKFQVEMDKIFQDPAKPLWEQREWIK 354
           +++  R   S EDG   P  V           ++   Q ++++   +  +    Q++W++
Sbjct: 319 KKI--RPSLSHEDGDH-PSHVNSLECNKVSLPQIPFSQADVNQGGAESGRAGSVQKQWME 375

Query: 355 MQLLQLQEENVGYQAQALELEKQRFKWLRYCSKKDRELEKLRLENKKMKLENEHRILKLK 414
            + LQL+E+ +  Q + LELEKQRF+W R+  K+D+ELE++R+EN++MKLEN+   L+LK
Sbjct: 376 SRTLQLEEQKLQIQVELLELEKQRFRWQRFSKKRDQELERMRMENERMKLENDRMGLELK 435

Query: 415 QKE 417
           Q+E
Sbjct: 436 QRE 438


>AT1G76870.1 | Symbols:  | BEST Arabidopsis thaliana protein match
           is: sequence-specific DNA binding transcription factors
           (TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins
           in 76 species: Archae - 0; Bacteria - 2; Metazoa - 137;
           Fungi - 14; Plants - 127; Viruses - 0; Other Eukaryotes
           - 126 (source: NCBI BLink). | chr1:28857250-28858407
           FORWARD LENGTH=385
          Length = 385

 Score =  226 bits (575), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 145/346 (41%), Positives = 206/346 (59%), Gaps = 40/346 (11%)

Query: 87  LSEDDELGY-AEDGNCEHLDGGKSKKGSTWQRMKWTDNIVGLLVAVVSCVDDDGTIGAGM 145
           +SEDDEL   + DG        KSK+ S WQR+KW D +V L++  +S + +D       
Sbjct: 60  MSEDDELCLLSSDGQ------NKSKENSPWQRVKWMDKMVKLMITALSYIGEDSG----- 108

Query: 146 ERAKRKYGALQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNEILGRGTCCQ 205
             + +K+  LQKKGKW++VSK+M  +G HVSPQQCEDKFNDLNKRYK+LNE+LGRGT C+
Sbjct: 109 --SDKKFAVLQKKGKWRSVSKVMDERGYHVSPQQCEDKFNDLNKRYKKLNEMLGRGTSCE 166

Query: 206 VVENPALLDSMPNLSAKMKDAVRKILSSKHLFYKEMCAYHNGQRLPNSYD----LDLHGY 261
           VVENP+LLD +  L+ K KD VR+I+SSKHLFY+EMC+YHNG RL   +D      LH  
Sbjct: 167 VVENPSLLDKIDYLNEKEKDEVRRIMSSKHLFYEEMCSYHNGNRLHLPHDPAVQRSLHLI 226

Query: 262 SLEHGRDSRXXXXXXXXXXXXXXXXXXXVDNEININARGDGGRMEELCDRNKQSEED-GH 320
           +L    D                      D++  ++ R     ++ L  R  QS ED GH
Sbjct: 227 TLGSRDDHDNDEHGKHQNEDLDDDDDYEEDHDGALSDRP----LKRL--RQSQSHEDVGH 280

Query: 321 --------FWPRSVRMDKFQVEMDK-IFQDPAKPLWEQREWIKMQLLQLQEENVGYQAQA 371
                     PRS      Q ++++ I  D  K    QR+ I+ + L+L+   +  QA+ 
Sbjct: 281 PNKGYDVPCLPRS------QADVNRGISLDSRKAAGLQRQQIESKSLELEGRKLQIQAEM 334

Query: 372 LELEKQRFKWLRYCSKKDRELEKLRLENKKMKLENEHRILKLKQKE 417
           +ELE+Q+FKW  +  +++++L K+R+EN++MKLENE   L+LK+ E
Sbjct: 335 MELERQQFKWEVFSKRREQKLAKMRMENERMKLENERMSLELKRIE 380


>AT3G10040.1 | Symbols:  | sequence-specific DNA binding
           transcription factors | chr3:3096580-3097875 REVERSE
           LENGTH=431
          Length = 431

 Score = 92.8 bits (229), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 76/110 (69%), Gaps = 1/110 (0%)

Query: 325 SVRMDKFQVEMDKIFQDPAKPLWEQREWIKMQLLQLQEENVGYQAQALELEKQRFKWLRY 384
           S  + + + E   + +D  K +WE++EWI+ ++L+++E+ +GY+ + +E+EKQR KW+RY
Sbjct: 319 STAVKRLREEAASVVEDVGKSVWEKKEWIRRKMLEIEEKKIGYEWEGVEMEKQRVKWMRY 378

Query: 385 CSKKDRELEKLRLENKKMKLENEHRILKLKQKEHE-TDCNRSEMSLDPAS 433
            SKK+RE+EK +L+N++ +LE E  IL L++ E E  +   S   +DP+S
Sbjct: 379 RSKKEREMEKAKLDNQRRRLETERMILMLRRSEIELNELQSSGTRVDPSS 428