Miyakogusa Predicted Gene
- Lj1g3v3331690.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3331690.3 Non Chatacterized Hit- tr|I3SZA6|I3SZA6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,no
description,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Ras,Small GTPase superfamily; ,CUFF.30771.3
(197 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP... 348 1e-96
AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 | R... 347 3e-96
AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 346 6e-96
AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-1667454... 346 6e-96
AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-l... 346 6e-96
AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 345 8e-96
AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 | Arab... 345 8e-96
AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |... 343 5e-95
AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related... 341 2e-94
AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-l... 335 1e-92
AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-lik... 318 1e-87
AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | RHO-relat... 313 5e-86
AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 | RHO-r... 298 2e-81
AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-lik... 291 2e-79
AT3G51290.2 | Symbols: | Protein of unknown function (DUF630) ;... 287 4e-78
AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 100 6e-22
AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A | chr3:16917... 100 6e-22
AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | R... 100 6e-22
AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-bindi... 98 3e-21
AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-relat... 98 4e-21
AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 98 4e-21
AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 | chr... 98 4e-21
AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTP... 98 4e-21
AT5G59840.1 | Symbols: | Ras-related small GTP-binding family p... 98 5e-21
AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 95 3e-20
AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, R... 95 4e-20
AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C... 92 2e-19
AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C... 91 4e-19
AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1, A... 91 7e-19
AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase ho... 90 9e-19
AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase ho... 90 1e-18
AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-rela... 89 1e-18
AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E... 89 2e-18
AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B, A... 89 2e-18
AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homo... 89 2e-18
AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D... 89 3e-18
AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small... 88 3e-18
AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase hom... 88 3e-18
AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 88 4e-18
AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 88 4e-18
AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C... 88 4e-18
AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A... 87 5e-18
AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase hom... 87 5e-18
AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 87 5e-18
AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RAB... 87 5e-18
AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A, R... 87 6e-18
AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B... 87 7e-18
AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A, R... 87 7e-18
AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 | Ras-rel... 87 9e-18
AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G... 85 3e-17
AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C... 84 5e-17
AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E... 84 5e-17
AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F... 84 6e-17
AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A... 84 6e-17
AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB... 83 1e-16
AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homol... 82 2e-16
AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I... 82 3e-16
AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |... 81 5e-16
AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RA... 81 5e-16
AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A... 81 5e-16
AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase ... 80 6e-16
AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB G... 80 6e-16
AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H | chr2:... 80 7e-16
AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | ... 80 7e-16
AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D... 80 8e-16
AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase hom... 80 8e-16
AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A... 78 3e-15
AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C, R... 78 4e-15
AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B... 78 5e-15
AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPas... 77 7e-15
AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A | chr5:25... 77 7e-15
AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |... 74 8e-14
AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homo... 71 4e-13
AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-bindi... 71 5e-13
AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RA... 71 5e-13
AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 | chr5:972... 70 9e-13
AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |... 70 9e-13
AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D... 69 2e-12
AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protei... 69 2e-12
AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 69 2e-12
AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B | chr3:30... 69 2e-12
AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase h... 69 2e-12
AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase ho... 69 2e-12
AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 | c... 69 3e-12
AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 68 4e-12
AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase hom... 68 4e-12
AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 67 7e-12
AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear pr... 65 2e-11
AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 | chr5:223922... 65 3e-11
AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear... 65 3e-11
AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A | chr4:61... 64 4e-11
AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A... 62 2e-10
AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 | ... 61 5e-10
AT5G54840.1 | Symbols: ATSGP1, SGP1 | Ras-related small GTP-bind... 49 2e-06
>AT1G75840.1 | Symbols: ARAC5, ATGP3, ROP4, ATROP4 | RAC-like GTP
binding protein 5 | chr1:28475964-28477377 FORWARD
LENGTH=196
Length = 196
Score = 348 bits (893), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 165/174 (94%), Positives = 172/174 (98%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
DLRDDKQFF DHPGAVPITT QGEEL+KLIG+P+YIECSSKTQQN+KAVFDAAI
Sbjct: 121 DLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAI 174
>AT3G51300.1 | Symbols: ARAC11, ROP1, ROP1AT, ATRAC11, ATROP1 |
RHO-related protein from plants 1 |
chr3:19043197-19044215 FORWARD LENGTH=197
Length = 197
Score = 347 bits (890), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 168/197 (85%), Positives = 176/197 (89%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRF+KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV+GSTVNLGLWD
Sbjct: 1 MSASRFVKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAIXXXXXX 180
DLRDDKQFF DHPGAVPITTAQGEELRK IGAP YIECSSKTQ+N+KAVFDAAI
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELRKQIGAPTYIECSSKTQENVKAVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXXXACSIL 197
ACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>AT4G35020.3 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 346 bits (887), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 161/174 (92%), Positives = 172/174 (98%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV+KKW+PELRHYAPGVPIILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
DLRDDKQFF +HPGAVPI+TAQGEEL+KLIGAP YIECS+KTQQN+KAVFDAAI
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAI 174
>AT4G35020.2 | Symbols: RAC3 | RAC-like 3 | chr4:16673176-16674540
FORWARD LENGTH=198
Length = 198
Score = 346 bits (887), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 161/174 (92%), Positives = 172/174 (98%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV+KKW+PELRHYAPGVPIILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
DLRDDKQFF +HPGAVPI+TAQGEEL+KLIGAP YIECS+KTQQN+KAVFDAAI
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAI 174
>AT4G35020.1 | Symbols: ARAC3, ROP6, RHO1PS, ATROP6, RAC3 | RAC-like
3 | chr4:16673176-16674540 FORWARD LENGTH=198
Length = 198
Score = 346 bits (887), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 161/174 (92%), Positives = 172/174 (98%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV+VDG+T+NLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVIVDGNTINLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVFLLAFSL+SKASYENV+KKW+PELRHYAPGVPIILVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLVSKASYENVSKKWVPELRHYAPGVPIILVGTKL 120
Query: 121 DLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
DLRDDKQFF +HPGAVPI+TAQGEEL+KLIGAP YIECS+KTQQN+KAVFDAAI
Sbjct: 121 DLRDDKQFFAEHPGAVPISTAQGEELKKLIGAPAYIECSAKTQQNVKAVFDAAI 174
>AT2G17800.2 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 345 bits (886), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 167/197 (84%), Positives = 176/197 (89%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAIXXXXXX 180
DLRDDKQFF DHPGAVPITTAQGEEL+KLIGAP YIECSSKTQ+N+K VFDAAI
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXXXACSIL 197
ACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>AT2G17800.1 | Symbols: ARAC1, ATGP2, ATRAC1, ROP3, ATROP3 |
Arabidopsis RAC-like 1 | chr2:7740313-7741942 FORWARD
LENGTH=197
Length = 197
Score = 345 bits (886), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 167/197 (84%), Positives = 176/197 (89%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAIXXXXXX 180
DLRDDKQFF DHPGAVPITTAQGEEL+KLIGAP YIECSSKTQ+N+K VFDAAI
Sbjct: 121 DLRDDKQFFIDHPGAVPITTAQGEELKKLIGAPAYIECSSKTQENVKGVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXXXACSIL 197
ACSIL
Sbjct: 181 PKQKKKKSKAQKACSIL 197
>AT4G35950.1 | Symbols: ARAC6, RAC2, ATROP5, ATRAC6, ROP5, RAC6 |
RAC-like 6 | chr4:17024051-17025514 REVERSE LENGTH=197
Length = 197
Score = 343 bits (879), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 165/197 (83%), Positives = 175/197 (88%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV+G+TVNLGLWD
Sbjct: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVF+LAFSLISKASYENV+KKWIPEL+HYAPGVPI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIVLVGTKL 120
Query: 121 DLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAIXXXXXX 180
DLRDDKQFF DHPGAVPITT QGEEL+KLIGAP YIECSSK+Q+N+K VFDAAI
Sbjct: 121 DLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRVVLQP 180
Query: 181 XXXXXXXXXXXXACSIL 197
ACSIL
Sbjct: 181 PKQKKKKNKAQKACSIL 197
>AT1G20090.1 | Symbols: ARAC4, ROP2, ATROP2, ATRAC4 | RHO-related
protein from plants 2 | chr1:6967223-6968603 FORWARD
LENGTH=195
Length = 195
Score = 341 bits (874), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 161/172 (93%), Positives = 169/172 (98%)
Query: 3 ASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTA 62
ASRFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDG+TVNLGLWDTA
Sbjct: 2 ASRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGLWDTA 61
Query: 63 GQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDL 122
GQEDYNRLRPLSYRGADVF+LAFSLISKASYEN+AKKWIPELRHYAPGVPIILVGTKLDL
Sbjct: 62 GQEDYNRLRPLSYRGADVFILAFSLISKASYENIAKKWIPELRHYAPGVPIILVGTKLDL 121
Query: 123 RDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
RDDKQFF DHPGAVPITT QGEEL+KLIG+ +YIECSSKTQQN+KAVFDAAI
Sbjct: 122 RDDKQFFIDHPGAVPITTNQGEELKKLIGSAVYIECSSKTQQNVKAVFDAAI 173
>AT5G45970.1 | Symbols: ARAC2, RAC2, ROP7, ATRAC2, ATROP7 | RAC-like
2 | chr5:18643761-18645758 FORWARD LENGTH=201
Length = 201
Score = 335 bits (858), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 155/174 (89%), Positives = 166/174 (95%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MS +RFIKCVTVGDGAVGKTC+LISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD
Sbjct: 1 MSTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYEN+ KKW+PEL+HYAPG+PI+LVGTKL
Sbjct: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYAPGIPIVLVGTKL 120
Query: 121 DLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
DLRDDKQF +DHPGA ITTAQGEELRK+IGA Y+ECSSKTQQN+KAVFD AI
Sbjct: 121 DLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAI 174
>AT5G62880.1 | Symbols: ARAC10, ATRAC10, ATROP11, RAC10 | RAC-like
10 | chr5:25237236-25238939 FORWARD LENGTH=215
Length = 215
Score = 318 bits (815), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 145/173 (83%), Positives = 163/173 (94%)
Query: 2 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
SAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANVVV+G+TVNLGLWDT
Sbjct: 4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVVVEGTTVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLD 121
AGQEDYNRLRPLSYRGADVF+L+FSL+S+ASYENV KKWIPEL+H+APGVP++LVGTKLD
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLSFSLVSRASYENVFKKWIPELQHFAPGVPLVLVGTKLD 123
Query: 122 LRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
LR+DK + DHPG P+TTAQGEELRKLIGA YIECSSKTQQN+KAVFD+AI
Sbjct: 124 LREDKHYLADHPGLSPVTTAQGEELRKLIGATYYIECSSKTQQNVKAVFDSAI 176
>AT3G48040.1 | Symbols: ARAC8, ATROP10, ROP10, ATRAC8 | RHO-related
protein from plants 10 | chr3:17731561-17733241 FORWARD
LENGTH=208
Length = 208
Score = 313 bits (801), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 144/173 (83%), Positives = 160/173 (92%)
Query: 2 SASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDT 61
SAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFS NVVV+G TVNLGLWDT
Sbjct: 4 SASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSVNVVVEGITVNLGLWDT 63
Query: 62 AGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLD 121
AGQEDYNRLRPLSYRGADVF+LAFSLIS+ASYENV KKWIPEL+H+APGVPI+LVGTK+D
Sbjct: 64 AGQEDYNRLRPLSYRGADVFVLAFSLISRASYENVFKKWIPELQHFAPGVPIVLVGTKMD 123
Query: 122 LRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
LR+D+ + DHPG P+TT+QGEELRK IGA YIECSSKTQQN+KAVFDAAI
Sbjct: 124 LREDRHYLSDHPGLSPVTTSQGEELRKHIGATYYIECSSKTQQNVKAVFDAAI 176
>AT4G28950.1 | Symbols: ARAC7, ATROP9, ATRAC7, RAC7, ROP9 |
RHO-related protein from plants 9 |
chr4:14278289-14279705 FORWARD LENGTH=209
Length = 209
Score = 298 bits (762), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 141/174 (81%), Positives = 153/174 (87%), Gaps = 2/174 (1%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWD 60
MSAS+FIKCVTVGDGAVGKTC+LI YTSN FPTDY+PTVFDNFSANV VDG VNLGLWD
Sbjct: 1 MSASKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGLWD 60
Query: 61 TAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKL 120
TAGQEDY+RLRPLSYRGAD+F+LAFSLISKASYENV KKW+PELR +AP VPI+LVGTKL
Sbjct: 61 TAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFAPNVPIVLVGTKL 120
Query: 121 DLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
DLRDDK + DH IT+ QGEELRK IGA YIECSSKTQQN+KAVFD AI
Sbjct: 121 DLRDDKGYLADHTNV--ITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDTAI 172
>AT2G44690.1 | Symbols: ARAC9, ATROP8, ROP8 | Arabidopsis RAC-like 9
| chr2:18429276-18430636 FORWARD LENGTH=209
Length = 209
Score = 291 bits (744), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 137/169 (81%), Positives = 152/169 (89%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQE 65
FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF+ANV+VDG TVNLGLWDTAGQE
Sbjct: 18 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFNANVLVDGKTVNLGLWDTAGQE 77
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDD 125
DYNR+RPLSYRGADVF+LAFSLIS+ S+EN+AKKW+PELRHYAP VPI+LVGTK DLRD+
Sbjct: 78 DYNRVRPLSYRGADVFILAFSLISRPSFENIAKKWVPELRHYAPTVPIVLVGTKSDLRDN 137
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
QF +++PGA I QG+ELRK IGA YIECSSK Q N+KAVFD AI
Sbjct: 138 MQFPKNYPGACTIFPEQGQELRKEIGALAYIECSSKAQMNVKAVFDEAI 186
>AT3G51290.2 | Symbols: | Protein of unknown function (DUF630)
;Protein of unknown function (DUF632) |
chr3:19039980-19044215 FORWARD LENGTH=798
Length = 798
Score = 287 bits (734), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 136/164 (82%), Positives = 143/164 (87%)
Query: 34 DYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASY 93
DYVPTVFDNFSANVVV+GSTVNLGLWDTAGQEDYNRLRPLSYRGADVF+LAFSLISKASY
Sbjct: 635 DYVPTVFDNFSANVVVNGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASY 694
Query: 94 ENVAKKWIPELRHYAPGVPIILVGTKLDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAP 153
ENV+KKWIPEL+HYAPGVPI+LVGTKLDLRDDKQFF DHPGAVPITTAQGEELRK IGAP
Sbjct: 695 ENVSKKWIPELKHYAPGVPIVLVGTKLDLRDDKQFFIDHPGAVPITTAQGEELRKQIGAP 754
Query: 154 MYIECSSKTQQNIKAVFDAAIXXXXXXXXXXXXXXXXXXACSIL 197
YIECSSKTQ+N+KAVFDAAI ACSIL
Sbjct: 755 TYIECSSKTQENVKAVFDAAIRVVLQPPKQKKKKSKAQKACSIL 798
>AT3G46060.3 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 94/167 (56%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLR 123
E + + YRGA LL + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ K+ AVP TA+G+ L G + E S+KT N++ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIKFF-ETSAKTNLNVEEVF 170
>AT3G46060.2 | Symbols: ARA3 | RAB GTPase homolog 8A |
chr3:16917908-16919740 FORWARD LENGTH=216
Length = 216
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 94/167 (56%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLR 123
E + + YRGA LL + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ K+ AVP TA+G+ L G + E S+KT N++ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIKFF-ETSAKTNLNVEEVF 170
>AT3G46060.1 | Symbols: ARA3, ARA-3, ATRABE1C, ATRAB8A, RAB8A | RAB
GTPase homolog 8A | chr3:16917908-16919740 FORWARD
LENGTH=216
Length = 216
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 94/167 (56%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLR 123
E + + YRGA LL + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ K+ AVP TA+G+ L G + E S+KT N++ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIKFF-ETSAKTNLNVEEVF 170
>AT3G54840.2 | Symbols: ARA6, RABF1 | Ras-related small GTP-binding
family protein | chr3:20318597-20320737 FORWARD
LENGTH=193
Length = 193
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAGQ 64
+K V +GD VGK+C+++ + F TV +F + + D +TV +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLR 123
E Y+ L PL YRGA V ++ + + S S++ A+ W+ EL +H +P + + LVG K DL
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKK-AQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFD 171
+ ++ + T G EL + G +IE S+KT NI +F+
Sbjct: 153 EKRE----------VPTEDGMELAEKNGM-FFIETSAKTADNINQLFE 189
>AT3G54840.1 | Symbols: ARA6, ATRABF1, ARA-6, ATRAB5C | Ras-related
small GTP-binding family protein |
chr3:20318597-20320782 FORWARD LENGTH=202
Length = 202
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--DGSTVNLGLWDTAGQ 64
+K V +GD VGK+C+++ + F TV +F + + D +TV +WDTAGQ
Sbjct: 34 VKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWDTAGQ 93
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLR 123
E Y+ L PL YRGA V ++ + + S S++ A+ W+ EL +H +P + + LVG K DL
Sbjct: 94 ERYSALAPLYYRGAGVAVIVYDITSPESFKK-AQYWVKELQKHGSPDIVMALVGNKADLH 152
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFD 171
+ ++ + T G EL + G +IE S+KT NI +F+
Sbjct: 153 EKRE----------VPTEDGMELAEKNGM-FFIETSAKTADNINQLFE 189
>AT3G53610.3 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLR 123
E + + YRGA LL + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ K+ AVP ++G+ L G + E S+KT N++ VF
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGMKFF-ETSAKTNLNVEEVF 170
>AT3G53610.2 | Symbols: ATRAB8, RAB8 | RAB GTPase homolog 8 |
chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLR 123
E + + YRGA LL + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ K+ AVP ++G+ L G + E S+KT N++ VF
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGMKFF-ETSAKTNLNVEEVF 170
>AT3G53610.1 | Symbols: ATRAB8, AtRab8B, AtRABE1a, RAB8 | RAB GTPase
homolog 8 | chr3:19876531-19878264 REVERSE LENGTH=216
Length = 216
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLR 123
E + + YRGA LL + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDSVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ K+ AVP ++G+ L G + E S+KT N++ VF
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGMKFF-ETSAKTNLNVEEVF 170
>AT5G59840.1 | Symbols: | Ras-related small GTP-binding family
protein | chr5:24107450-24109049 REVERSE LENGTH=216
Length = 216
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +F T ++ T+ +F + +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLR 123
E + + YRGA LL + + ++S+ N+ + WI + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWIRNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ K+ AVP ++G+ L G + E S+KT N++ VF
Sbjct: 134 ESKR-------AVP--KSKGQALADEYGIKFF-ETSAKTNLNVEEVF 170
>AT4G35860.1 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988839 REVERSE LENGTH=211
Length = 211
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS K + +GD VGK+CLL+ +T F + T+ F A +V VDG + L +W
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGT 118
DTAGQE + + YRGA LL + + + ++ ++A W+ + R +A P + I+L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANPNMSIMLIGN 119
Query: 119 KLDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
K DL + ++ +G++ K G +++E S++T QN++ F
Sbjct: 120 KCDLAHKR----------AVSKEEGQQFAKEHGL-LFLEASARTAQNVEEAF 160
>AT1G02130.1 | Symbols: ATRAB1B, ARA5, ARA-5, ATRABD2A, RABD2A, RA-5
| RAS 5 | chr1:400350-401788 REVERSE LENGTH=203
Length = 203
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 14/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+CLL+ ++ +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAP-GVPIILVGTKLDLR 123
E + + YRGA ++ + + + S+ NV K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNV-KQWLSEIDRYASDNVNKLLVGNKSDLT 126
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDA 172
+++ A+P TA+ IG P ++E S+K N++ F A
Sbjct: 127 ENR--------AIPYETAKA--FADEIGIP-FMETSAKDATNVEQAFMA 164
>AT4G17170.1 | Symbols: AT-RAB2, ATRABB1C, ATRAB2A, RAB2A, RABB1C,
ATRAB-B1B, RAB-B1B | RAB GTPase homolog B1C |
chr4:9644908-9646220 REVERSE LENGTH=211
Length = 211
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 92/172 (53%), Gaps = 14/172 (8%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+CLL+ +T F + T+ F A ++ +D + L +W
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGT 118
DTAGQE + + YRGA LL + + + ++ ++A W+ + R +A + I+L+G
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQHANANMTIMLIGN 119
Query: 119 KLDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
K DL + ++T +GE+ K G +++E S+KT QN++ F
Sbjct: 120 KCDLAHRR----------AVSTEEGEQFAKEHGL-IFMEASAKTAQNVEEAF 160
>AT4G39890.1 | Symbols: AtRABH1c, RABH1c | RAB GTPase homolog H1C |
chr4:18506112-18507459 FORWARD LENGTH=214
Length = 214
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 93/167 (55%), Gaps = 17/167 (10%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y PT+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPG---VPIILVGTKLDLR 123
+ L P R + V ++ + + ++ ++ N + KWI ++ H G V I+LVG K DL
Sbjct: 71 FRSLIPSYIRDSSVAIVVYDVSNRQTFLNTS-KWIEDV-HRERGQSNVIIVLVGNKTDLV 128
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ +Q ++ ++GE+ K G M+IE S+K NIKA+F
Sbjct: 129 EKRQ----------VSISEGEDKGKEYGV-MFIETSAKENFNIKALF 164
>AT5G45130.1 | Symbols: ATRAB5A, ATRABF2A, RABF2A, RAB5A, RHA1,
ATRAB-F2A, RAB-F2A | RAB homolog 1 |
chr5:18244495-18246060 FORWARD LENGTH=200
Length = 200
Score = 90.5 bits (223), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ L++ + + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDD 125
Y+ L P+ YRGA ++ F + ++AS+E AKKW+ EL+ P + + L G K DL D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDITNQASFER-AKKWVQELQAQGNPNMVMALAGNKADLLDA 130
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
++ +A+ E+ + ++E S+KT N+K +F
Sbjct: 131 RK-----------VSAEEAEIYAQENSLFFMETSAKTATNVKDIF 164
>AT4G17160.1 | Symbols: ATRAB2B, ATRABB1A, RABB1a | RAB GTPase
homolog B1A | chr4:9641980-9643541 REVERSE LENGTH=205
Length = 205
Score = 90.1 bits (222), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 1 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLW 59
MS + K + +GD VGK+CLL+ +T F + T+ F A + +D + L +W
Sbjct: 1 MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGT 118
DTAGQE + + YRG LL + + + ++ ++A W+ E R H + + +L+G
Sbjct: 61 DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLA-SWLEEARQHASENMTTMLIGN 119
Query: 119 KLDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
K DL D + ++T +GE+ + G +++E S+KT N++ F
Sbjct: 120 KCDLEDKR----------TVSTEEGEQFAREHGL-IFMEASAKTAHNVEEAF 160
>AT3G09900.1 | Symbols: ATRABE1E, ATRAB8E, RABE1e | RAB GTPase
homolog E1E | chr3:3034687-3036379 FORWARD LENGTH=218
Length = 218
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 96/167 (57%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +TF T ++ T+ +F V +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLR 123
E + + YRGA LL + + ++S+ N+ + W+ + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDSVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ K+ AVP T++G+ L G + E S+KT QN++ VF
Sbjct: 134 ESKR-------AVP--TSKGQALADEYGIKFF-ETSAKTNQNVEQVF 170
>AT2G44610.1 | Symbols: RAB6, ATRABH1B, ATRAB6A, RAB6A | Ras-related
small GTP-binding family protein |
chr2:18411778-18413883 REVERSE LENGTH=208
Length = 208
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDD 125
+ L P R + V ++ + + S+ S+ N KWI E+R V ++LVG K DL D
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVASRQSFLNTT-KWIDEVRTERGSDVIVVLVGNKTDLVDK 129
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+Q ++ A+ EL M+IE S+K NIKA+F
Sbjct: 130 RQV------SIEEAEAKARELN-----VMFIETSAKAGFNIKALF 163
>AT4G18430.1 | Symbols: AtRABA1e, RABA1e | RAB GTPase homolog A1E |
chr4:10183903-10185223 REVERSE LENGTH=217
Length = 217
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ V VD + LWDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 123
E Y + YRGA LL + + ++ENV ++W+ ELR H V I+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDITRHITFENV-ERWLKELRDHTDANVVIMLVGNKADLR 131
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
H AVP A+ R+ + ++E S+ N++ F
Sbjct: 132 --------HLRAVPTEEARSFSERENM---FFMETSALDATNVEQAF 167
>AT4G19640.1 | Symbols: ARA7, ARA-7, ATRABF2B, ATRAB5B, RABF2B,
ATRAB-F2B, RAB-F2B | Ras-related small GTP-binding
family protein | chr4:10687441-10689449 REVERSE
LENGTH=200
Length = 200
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD GK+ L++ + + F T+ F S + V+ +TV +WDTAGQE
Sbjct: 12 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLRDD 125
Y+ L P+ YRGA ++ F + ++AS+E AKKW+ EL+ P + + L G K DL D
Sbjct: 72 YHSLAPMYYRGAAAAIIVFDVTNQASFER-AKKWVQELQAQGNPNMVMALAGNKSDLLDA 130
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
++ TA+ + ++E S+KT N+K +F
Sbjct: 131 RK-----------VTAEDAQTYAQENGLFFMETSAKTATNVKEIF 164
>AT1G16920.1 | Symbols: RAB11, ATRABA1B, RABA1b | RAB GTPase homolog
A1B | chr1:5787489-5789147 REVERSE LENGTH=216
Length = 216
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 11/134 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ + VDG V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 123
E Y + YRGA LL + + +A++ENV +W+ EL+ H P + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFENV-DRWLKELKNHTDPNIVVMLVGNKSDLR 131
Query: 124 DDKQFFQDHPGAVP 137
H AVP
Sbjct: 132 --------HLLAVP 137
>AT3G12160.1 | Symbols: ATRABA4D, RABA4D | RAB GTPase homolog A4D |
chr3:3879495-3880437 REVERSE LENGTH=222
Length = 222
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD AVGKT LL + N F D T+ F + +V+D TV +WDTAGQE
Sbjct: 17 KVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAGQER 76
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDD 125
Y + YRGA +L + + + S++++A KW+ ELR H + I+L+G K DL
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDMTKRQSFDHMA-KWLEELRGHADKNIVIMLIGNKCDLGSL 135
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ AVP AQ R+ + ++E S+ N++ F
Sbjct: 136 R--------AVPTEDAQEFAQRENL---FFMETSALEATNVETAF 169
>AT3G11730.1 | Symbols: ATFP8, ATRABD1, RABD1 | Ras-related small
GTP-binding family protein | chr3:3709490-3711397
REVERSE LENGTH=205
Length = 205
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 86/167 (51%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD +VGK+CLL+ + + + Y+ T+ +F + DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLR 123
E + + YRGA ++ + S+ NV K+W+ E+ YA V +L+G K D+
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDCTEMESFNNV-KQWLSEIDRYANESVCKLLIGNKNDMV 126
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ K ++T G L +G P ++E S+K N++ F
Sbjct: 127 ESK----------VVSTETGRALADELGIP-FLETSAKDSINVEQAF 162
>AT4G17530.1 | Symbols: RAB1C, ATRAB1C, ATRABD2C | RAB GTPase
homolog 1C | chr4:9773721-9775424 REVERSE LENGTH=202
Length = 202
Score = 88.2 bits (217), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+CLL+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLR 123
E + + YRGA ++ + + S+ NV K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNKCDLT 126
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDA 172
K ++T + +G P ++E S+K N++ F A
Sbjct: 127 SQK----------VVSTETAKAFADELGIP-FLETSAKNATNVEEAFMA 164
>AT1G43890.3 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQ 64
K + +GD VGK+ LL+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDL 122
E + L YRGA ++ + + + ++ N++ W E+ Y+ I LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 RDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
++ ++ +G + + G +++ECS+KT+ N++ F+ +
Sbjct: 132 ESER----------AVSKKEGIDFAREYGC-LFLECSAKTRVNVEQCFEELV 172
>AT1G43890.2 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQ 64
K + +GD VGK+ LL+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDL 122
E + L YRGA ++ + + + ++ N++ W E+ Y+ I LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 RDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
++ ++ +G + + G +++ECS+KT+ N++ F+ +
Sbjct: 132 ESER----------AVSKKEGIDFAREYGC-LFLECSAKTRVNVEQCFEELV 172
>AT1G43890.1 | Symbols: ATRAB18, ATRABC1, RAB18-1, RABC1, ATRAB-C1,
RAB18 | RAB GTPASE HOMOLOG B18 | chr1:16646934-16648395
FORWARD LENGTH=212
Length = 212
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGST-VNLGLWDTAGQ 64
K + +GD VGK+ LL+S+TSNTF D PT+ +F + G + L +WDTAGQ
Sbjct: 13 LFKVLLIGDSGVGKSSLLLSFTSNTFD-DLSPTIGVDFKVKYLTIGEKKLKLAIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDL 122
E + L YRGA ++ + + + ++ N++ W E+ Y+ I LVG K+D
Sbjct: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDK 131
Query: 123 RDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
++ ++ +G + + G +++ECS+KT+ N++ F+ +
Sbjct: 132 ESER----------AVSKKEGIDFAREYGC-LFLECSAKTRVNVEQCFEELV 172
>AT1G73640.1 | Symbols: AtRABA6a, RABA6a | RAB GTPase homolog A6A |
chr1:27687033-27687987 FORWARD LENGTH=233
Length = 233
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 87/167 (52%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ LL ++ + F D PT+ F+ NV V + +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLR 123
E + + YRGA LL + + + +++N+ KKW+ ELR +A P ++LVG K DLR
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRTTFDNI-KKWLFELRDFANPETVVVLVGNKSDLR 131
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
++ +D T A+ E L ++E S+ N++ F
Sbjct: 132 QSREVEEDEGK----TLAESEGL-------YFLETSALENVNVEEAF 167
>AT5G47200.1 | Symbols: ATRABD2B, ATRAB1A, RAB1A | RAB GTPase
homolog 1A | chr5:19167029-19168718 FORWARD LENGTH=202
Length = 202
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K + +GD VGK+CLL+ + +++ Y+ T+ +F V DG T+ L +WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLR 123
E + + YRGA ++ + + S+ NV K+W+ E+ YA V +LVG K DL
Sbjct: 68 ERFRTITSSYYRGAHGIIVTYDVTDLESFNNV-KQWLNEIDRYASENVNKLLVGNKNDLT 126
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDA 172
K ++T + +G P ++E S+K N++ F A
Sbjct: 127 SQK----------VVSTETAKAFADELGIP-FLETSAKNATNVEEAFMA 164
>AT5G03520.1 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883679-885158 FORWARD
LENGTH=216
Length = 216
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 95/167 (56%), Gaps = 13/167 (7%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
IK + +GD VGK+CLL+ ++ +TF T ++ T+ +F V +DG + L +WDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-RHYAPGVPIILVGTKLDLR 123
E + + YRGA LL + + ++S+ N+ + W+ + +H + V ILVG K D+
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQHASDNVNKILVGNKADMD 133
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ K+ AVP TA+G+ L G + E S+KT N++ VF
Sbjct: 134 ESKR-------AVP--TAKGQALADEYGIKFF-ETSAKTNLNVENVF 170
>AT2G22290.1 | Symbols: ATRABH1D, ATRAB-H1D, RAB-H1D, ATRAB6, RABH1d
| RAB GTPase homolog H1D | chr2:9466568-9467688 FORWARD
LENGTH=207
Length = 207
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPG-VPIILVGTKLDLRDD 125
+ L P R + V ++ + + ++ S+ N + KWI E+R+ G V I+LVG K DL +
Sbjct: 71 FRSLIPSYIRDSSVAVVVYDVANRLSFLNTS-KWIEEVRNERAGDVIIVLVGNKTDLVEK 129
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+Q ++ +G+ + G M+IE S+K NIK +F
Sbjct: 130 RQ----------VSIEEGDSKGREYGV-MFIETSAKAGFNIKPLF 163
>AT5G03530.1 | Symbols: ATRAB ALPHA, ATRAB, ATRAB18B, ATRABC2A,
RABC2A | RAB GTPase homolog C2A | chr5:885741-887061
REVERSE LENGTH=210
Length = 210
Score = 87.0 bits (214), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQED 66
K + +GD VGK+ LL+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLVSFISSSVE-DLAPTIGVDFKIKQLTVGGKRLKLTIWDTAGQER 73
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDLRD 124
+ L YRGA +L + + + ++ N+ W E+ Y+ + LVG K+D
Sbjct: 74 FRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQECVRMLVGNKVDRES 133
Query: 125 DKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFD 171
++ ++ +G L K + M++ECS++T+QN++ F+
Sbjct: 134 ER----------GVSREEGIALAKELNC-MFLECSARTRQNVEQCFE 169
>AT1G18200.1 | Symbols: AtRABA6b, RABA6b | RAB GTPase homolog A6B |
chr1:6265416-6266659 REVERSE LENGTH=229
Length = 229
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 92/171 (53%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ LL ++ + F D PT+ +F+ NV V T+ +WDTAGQ
Sbjct: 13 LFKAVLIGDSAVGKSNLLSRFSRDEFRLDSKPTIGVDFAYRNVRVGDKTIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHY-APGVPIILVGTKLDLR 123
E + + YRGA LL + + + +++N+ +KW+ ELR + +P ++LVG K DL
Sbjct: 73 ERFRAITSSYYRGALGALLIYDITRRITFKNI-EKWLSELRGFSSPETVVVLVGNKSDLG 131
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
++ ++ G T A+ E L ++E S+ QN++ F + I
Sbjct: 132 QSRE-VEEEEGK---TLAESEGL-------YFLETSALENQNVEEAFLSMI 171
>AT1G09630.1 | Symbols: ATRAB11C, ATRABA2A, ATRAB-A2A, RAB-A2A,
RAB11c | RAB GTPase 11C | chr1:3118350-3119571 REVERSE
LENGTH=217
Length = 217
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 79/150 (52%), Gaps = 10/150 (6%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDLR 123
E Y + YRGA LL + + ++ENV+ +W+ ELR +A + I+L+G K DL+
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVS-RWLKELRDHADSNIVIMLIGNKTDLK 130
Query: 124 -------DDKQFFQDHPGAVPITTAQGEEL 146
+D Q + + G I T+ E L
Sbjct: 131 HLRAVATEDAQSYAEKEGLSFIETSALEAL 160
>AT1G06400.1 | Symbols: ARA2, ATRABA1A, ATRAB11E, ARA-2 |
Ras-related small GTP-binding family protein |
chr1:1951089-1952686 REVERSE LENGTH=216
Length = 216
Score = 86.7 bits (213), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 83/167 (49%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ V+G V +WDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 123
E Y + YRGA LL + + A++EN A +W+ ELR H P + ++L+G K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLIYDVTRHATFENAA-RWLRELRGHTDPNIVVMLIGNKCDLR 131
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
H AV A+ R+ + ++E S+ N++ F
Sbjct: 132 --------HLVAVKTEEAKAFAERESL---YFMETSALDATNVENAF 167
>AT3G15060.1 | Symbols: AtRABA1g, RABA1g | RAB GTPase homolog A1G |
chr3:5069239-5070025 FORWARD LENGTH=217
Length = 217
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD VGK+ LL +T N F + T+ F+ + VD V +WDTAGQE
Sbjct: 15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQER 74
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDD 125
Y + YRGA LL + + ++ENV ++W+ ELR H + I+LVG K DLR
Sbjct: 75 YRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTEANIVIMLVGNKADLR-- 131
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
H AV A+ R+ ++E S+ N++ F
Sbjct: 132 ------HLRAVSTEDAKAFAERE---NTFFMETSALEALNVENAF 167
>AT5G45750.1 | Symbols: AtRABA1c, RABA1c | RAB GTPase homolog A1C |
chr5:18559318-18560639 FORWARD LENGTH=216
Length = 216
Score = 84.3 bits (207), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 66/120 (55%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ + VD + +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 123
E Y + YRGA LL + + +++ENV + W+ ELR H P + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ETWLKELRNHTDPNIVVMLVGNKSDLR 131
>AT5G10260.1 | Symbols: AtRABH1e, RABH1e | RAB GTPase homolog H1E |
chr5:3219991-3221301 FORWARD LENGTH=207
Length = 207
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 88/165 (53%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD +VGKT ++ + + F T Y T+ D S + ++ TV L LWDTAGQE
Sbjct: 11 KLVFLGDQSVGKTSIITRFMYDKFDTTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 70
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDD 125
+ L P R + V ++ + + ++ S+ N + KWI ++R V I+LVG K DL D
Sbjct: 71 FRSLIPSYIRDSSVAVIVYDVANRQSFLNTS-KWIEDVRTERGSDVIIVLVGNKTDLVDK 129
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+Q ++ +G+ + G ++IE S+K NIK +F
Sbjct: 130 RQ----------VSIEEGDNKARDYGV-IFIETSAKAGFNIKPLF 163
>AT5G60860.1 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F |
chr5:24484750-24485565 FORWARD LENGTH=217
Length = 217
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 80/167 (47%), Gaps = 14/167 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ + VD V +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 123
E Y + YRGA LL + + ++ENV ++W+ ELR H + I+ VG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMFVGNKADLR 131
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
H AV A+ R+ ++E S+ N++ F
Sbjct: 132 --------HLRAVSTEDAKAFAERE---NTFFMETSALESMNVENAF 167
>AT5G64990.1 | Symbols: AtRABH1a, RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=206
Length = 206
Score = 84.0 bits (206), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 84/165 (50%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQED 66
K V +GD VGKT ++ + F T Y T+ D S + T L LWDTAGQE
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWDTAGQER 68
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDD 125
+ L P R + V ++ + + SK S+ N + KWI E+R V I+LVG K DL +
Sbjct: 69 FKSLVPSYIRDSSVAVIVYDVASKQSFINTS-KWIEEVRAERGSYVIIVLVGNKTDLVNK 127
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+Q ++ +GE + GA +++E S+K NIK +F
Sbjct: 128 RQ----------VSIEEGENKAREFGA-LFMETSAKAGFNIKPLF 161
>AT4G18800.1 | Symbols: ATHSGBP, ATRAB11B, ATRABA1D, RABA1d | RAB
GTPase homolog A1D | chr4:10320156-10321339 REVERSE
LENGTH=214
Length = 214
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ LL +T N F + T+ F+ + V+ + +WDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 123
E Y + YRGA LL + + +++ENV ++W+ ELR H P + ++LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENV-ERWLRELRDHTDPNIVVMLVGNKSDLR 131
>AT5G47960.1 | Symbols: SMG1, ATRABA4C, RABA4C | RAB GTPase homolog
A4C | chr5:19421533-19422473 REVERSE LENGTH=223
Length = 223
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 11/133 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD AVGK+ LL ++ N F + T+ F + +D T+ +WDTAGQE
Sbjct: 17 KVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQIWDTAGQER 76
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDL--- 122
Y + YRGA +L + + + S+++VA +W+ ELR H + I+L+G K DL
Sbjct: 77 YRAVTSAYYRGAVGAMLVYDITKRQSFDHVA-RWLEELRGHADKNIVIMLIGNKTDLGTL 135
Query: 123 -----RDDKQFFQ 130
D K+F Q
Sbjct: 136 RAVPTEDAKEFAQ 148
>AT1G28550.1 | Symbols: AtRABA1i, RABA1i | RAB GTPase homolog A1I |
chr1:10036966-10037698 REVERSE LENGTH=218
Length = 218
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V GD VGK+ LL +T N F D T+ F+ ++ D V +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 123
E Y + YRGA LL + + ++ENV ++W+ ELR H + I+LVG K DLR
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANIVIMLVGNKADLR 131
>AT2G43130.1 | Symbols: ARA4, ATRAB11F, ATRABA5C, ARA-4, RABA5C |
P-loop containing nucleoside triphosphate hydrolases
superfamily protein | chr2:17929899-17930904 REVERSE
LENGTH=214
Length = 214
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ LL Y N F + T+ F + ++++DG V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLTRYARNEFNPNSKATIGVEFQTQSMLIDGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 123
E + + YRGA L+ + + +++ENV +W+ EL H V +L+G K DL
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDITRSSTFENVG-RWLDELNTHSDTTVAKMLIGNKCDLE 130
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
+ ++ +G+ L + G ++E S+ N+K F+ I
Sbjct: 131 SIR----------AVSVEEGKSLAESEG-LFFMETSALDSTNVKTAFEMVI 170
>AT1G07410.1 | Symbols: ATRABA2B, RAB-A2B, ATRAB-A2B, RABA2b | RAB
GTPase homolog A2B | chr1:2276270-2277154 FORWARD
LENGTH=214
Length = 214
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDL 122
E Y + YRGA LL + + + ++ENV +W+ ELR +A + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFENVL-RWLRELRDHADSNIVIMMAGNKSDL 129
>AT5G65270.1 | Symbols: AtRABA4a, RABA4a | RAB GTPase homolog A4A |
chr5:26083437-26084550 FORWARD LENGTH=226
Length = 226
Score = 80.9 bits (198), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 86/165 (52%), Gaps = 14/165 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD AVGK+ +L Y + F D T+ F + +V+D +V +WDTAGQE
Sbjct: 19 KVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAGQER 78
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDD 125
Y + YRGA +L + + + +++++ +W+ ELR H + IIL+G K DL D
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDITRRQTFDHIP-RWLEELRAHADKNIVIILIGNKSDLVDQ 137
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ A+P T +E + G ++E S+ N+++ F
Sbjct: 138 R--------AIP--TEDAKEFAEKEGL-FFLETSAFNATNVESAF 171
>AT5G59150.1 | Symbols: ATRABA2D, ATRAB-A2D, RABA2D | RAB GTPase
homolog A2D | chr5:23876858-23878244 FORWARD LENGTH=217
Length = 217
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGKT +L +T N F + T+ F+ + V+G TV +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDL 122
E Y + YRGA LL + + + +++NV +W+ ELR +A + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHADSNIVIMMAGNKADL 129
>AT4G39990.1 | Symbols: ATRABA4B, ATRAB11G, ATGB3, RABA4B | RAB
GTPase homolog A4B | chr4:18542722-18543779 FORWARD
LENGTH=224
Length = 224
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 14/166 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQED 66
K V +GD AVGK+ LL + + F D T+ F + ++ ++ +WDTAGQE
Sbjct: 19 KVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSIEQKSIKAQIWDTAGQER 78
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLRDD 125
Y + YRGA +L + + + ++E++ +W+ ELR H + IIL+G K DL D
Sbjct: 79 YRAVTSAYYRGAVGAMLVYDMTKRETFEHIP-RWLEELRAHADKNIVIILIGNKSDLEDQ 137
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFD 171
+ AVP T +E + G ++E S+ N++ F+
Sbjct: 138 R--------AVP--TEDAKEFAEKEGL-FFLETSALNATNVENSFN 172
>AT2G33870.1 | Symbols: ArRABA1h | RAB GTPase homolog A1H |
chr2:14337366-14338251 REVERSE LENGTH=218
Length = 218
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSA-NVVVDGSTVNLGLWDTAGQ 64
K V GD VGK+ LL +T N F D T+ F+ ++ VD V +WDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQ 72
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDL 122
E Y + YRGA LL + + ++ENV ++W+ ELR H I+LVG K DL
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENV-ERWLKELRDHTDANTVIMLVGNKADL 130
>AT1G05810.1 | Symbols: ARA, ARA-1, ATRAB11D, ATRABA5E, RABA5E | RAB
GTPase homolog A5E | chr1:1748314-1749350 FORWARD
LENGTH=261
Length = 261
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ LL Y N F + T+ F + ++ ++G V +WDTAGQ
Sbjct: 55 LFKIVVIGDSAVGKSNLLSRYARNEFSANSKATIGVEFQTQSMEIEGKEVKAQIWDTAGQ 114
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 123
E + + YRGA L+ + + + ++E+V +W+ EL+ H V +LVG K DL
Sbjct: 115 ERFRAVTSAYYRGAVGALVVYDITRRTTFESVG-RWLDELKIHSDTTVARMLVGNKCDLE 173
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
+ + ++ +G+ L + G ++E S+ N+K F+ I
Sbjct: 174 NIR----------AVSVEEGKALAEEEG-LFFVETSALDSTNVKTAFEMVI 213
>AT2G31680.1 | Symbols: AtRABA5d, RABA5d | RAB GTPase homolog A5D |
chr2:13473781-13474957 REVERSE LENGTH=219
Length = 219
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ LL Y N F T+ F + N+ ++G V +WDTAGQ
Sbjct: 12 LFKIVIIGDSAVGKSNLLSRYARNEFNAHSKATIGVEFQTQNMEIEGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 123
E + + YRGA L+ + + ++++E+V +W+ EL+ H V +LVG K DL
Sbjct: 72 ERFRAVTSAYYRGAVGALVVYDISRRSTFESVG-RWLDELKTHSDTTVARMLVGNKCDLE 130
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
+ ++ +G+ L + G ++E S+ N+K F+ I
Sbjct: 131 SIR----------AVSVEEGKALAETEG-LFFMETSALDSTNVKTAFEMVI 170
>AT1G01200.1 | Symbols: ATRABA3, ATRAB-A3, RABA3 | RAB GTPase
homolog A3 | chr1:86715-88145 REVERSE LENGTH=237
Length = 237
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQED 66
K V +GD AVGKT LL +T N F D T+ F + + + G V +WDTAGQE
Sbjct: 30 KVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQER 89
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII-LVGTKLDL 122
Y + YRGA ++ + + + S+++VA +W+ ELR +A +I LVG K DL
Sbjct: 90 YRAVTSAYYRGALGAMVVYDITKRLSFDHVA-RWVEELRAHADDSAVIMLVGNKADL 145
>AT5G47520.1 | Symbols: AtRABA5a, RABA5a | RAB GTPase homolog A5A |
chr5:19277596-19278366 REVERSE LENGTH=221
Length = 221
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ LL + + F + T+ F + ++G + +WDTAGQ
Sbjct: 14 LFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMDINGKEIKAQIWDTAGQ 73
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 123
E + + YRGA LL + + + ++ ++ +W+ EL H V ILVG K DL+
Sbjct: 74 ERFRAVTSAYYRGAVGALLVYDISRRQTFHSIG-RWLNELHTHSDMNVVTILVGNKSDLK 132
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
D ++ ++TA+G+ L + G ++E S+ N+ A F+ +
Sbjct: 133 DLRE----------VSTAEGKALAEAQGL-FFMETSALDSSNVAAAFETVV 172
>AT3G46830.1 | Symbols: ATRAB11A, ATRABA2C, ATRAB-A2C, RAB-A2C,
RABA2c | RAB GTPase homolog A2C | chr3:17246699-17248362
REVERSE LENGTH=217
Length = 217
Score = 78.2 bits (191), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD VGK+ +L +T N F + T+ F+ V+G T+ +WDTAGQ
Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYA-PGVPIILVGTKLDL 122
E Y + YRGA LL + + + +++NV +W+ ELR +A + I++ G K DL
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQTFDNVL-RWLRELRDHADSNIVIMMAGNKSDL 129
>AT3G07410.1 | Symbols: AtRABA5b, RABA5b | RAB GTPase homolog A5B |
chr3:2372485-2373482 REVERSE LENGTH=217
Length = 217
Score = 77.8 bits (190), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 85/171 (49%), Gaps = 14/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVV-VDGSTVNLGLWDTAGQ 64
K V +GD AVGK+ LL ++ + F T+ T+ F +V ++G V +WDTAGQ
Sbjct: 12 LFKIVLIGDSAVGKSNLLSRFSRDEFDTNSKATIGVEFQTQLVEIEGKEVKAQIWDTAGQ 71
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGTKLDLR 123
E + + YRGA L+ + + ++E+V K+W+ EL H V +LVG K DL
Sbjct: 72 ERFRAVTSAYYRGAFGALIVYDITRGDTFESV-KRWLQELNTHCDTAVAQMLVGNKCDLE 130
Query: 124 DDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFDAAI 174
D + ++ +G+ L + G ++E S+ N+ F+ I
Sbjct: 131 DIR----------AVSVEEGKALAEEEG-LFFMETSALDATNVDKAFEIVI 170
>AT1G22740.1 | Symbols: RAB7, ATRABG3B, RAB75, RABG3B | RAB GTPase
homolog G3B | chr1:8049247-8050494 FORWARD LENGTH=203
Length = 203
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 84/178 (47%), Gaps = 17/178 (9%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
MS R +K + +GD VGKT L+ Y +N F Y T+ +F + + +D V L
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVP 112
+WDTAGQE + L YRGAD +L + + S+E++ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESL-DNWHNEFLTRASPRDPMAFP 119
Query: 113 IILVGTKLDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
IL+G K+D+ D + ++ + E G +Y E S+K N+ F
Sbjct: 120 FILLGNKVDI--------DGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSF 169
>AT5G64990.2 | Symbols: RABH1a | RAB GTPase homolog H1A |
chr5:25963562-25964792 REVERSE LENGTH=213
Length = 213
Score = 77.0 bits (188), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 21/172 (12%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLW------- 59
K V +GD VGKT ++ + F T Y T+ D S + T L LW
Sbjct: 9 KLVFLGDQGVGKTSIITCFMYGKFDTSYQATIGIDFLSKTTRYEDRTFRLQLWYKKLSLG 68
Query: 60 DTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELR-HYAPGVPIILVGT 118
DTAGQE + L P R + V ++ + + SK S+ N + KWI E+R V I+LVG
Sbjct: 69 DTAGQERFKSLVPSYIRDSSVAVIVYDVASKQSFINTS-KWIEEVRAERGSYVIIVLVGN 127
Query: 119 KLDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
K DL + +Q ++ +GE + GA +++E S+K NIK +F
Sbjct: 128 KTDLVNKRQ----------VSIEEGENKAREFGA-LFMETSAKAGFNIKPLF 168
>AT3G18820.1 | Symbols: ATRABG3F, ATRAB7B, RAB71, RABG3F, RAB7B |
RAB GTPase homolog G3F | chr3:6484266-6486005 FORWARD
LENGTH=206
Length = 206
Score = 73.6 bits (179), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVPIILVGTK 119
E + L YRGAD +L + + S S+EN+ W E L +P P +L+G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSMKSFENL-NNWREEFLIQASPSDPENFPFVLIGNK 126
Query: 120 LDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+D+ D A ++G P Y E S+K N++ F
Sbjct: 127 VDVDDGNSRVVSEKKAKAWCASKG-------NIP-YFETSAKVGTNVEEAF 169
>AT2G21880.1 | Symbols: ATRAB7A, ATRABG2, RAB7A | RAB GTPase homolog
7A | chr2:9324899-9326170 REVERSE LENGTH=212
Length = 212
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y F Y T+ +F + + +D +V L +WDTAGQ
Sbjct: 9 LLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQIWDTAGQ 68
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVPIILVGTK 119
E + L YRGAD +L + + + S+E + W E L+ P P +L+G K
Sbjct: 69 ERFQSLGAAFYRGADCCVLVYDVNNLKSFETL-NNWHTEFLKQANPMEPETFPFVLIGNK 127
Query: 120 LDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
D+ D + ++ + E G Y E S+K NI F
Sbjct: 128 TDV--------DGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAF 170
>AT4G35860.2 | Symbols: ATRABB1B, ATGB2, ATRAB2C, GB2 | GTP-binding
2 | chr4:16987118-16988587 REVERSE LENGTH=165
Length = 165
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 13/125 (10%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRH 106
V VDG + L +WDTAGQE + + YRGA LL + + + ++ ++A W+ + R
Sbjct: 2 VTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-SWLEDARQ 60
Query: 107 YA-PGVPIILVGTKLDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQN 165
+A P + I+L+G K DL + ++ +G++ K G +++E S++T QN
Sbjct: 61 HANPNMSIMLIGNKCDLAHKR----------AVSKEEGQQFAKEHG-LLFLEASARTAQN 109
Query: 166 IKAVF 170
++ F
Sbjct: 110 VEEAF 114
>AT5G03520.2 | Symbols: ATRAB8C, ATRABE1D, ATRAB-E1D, RAB-E1D, RAB8C
| RAB GTPase homolog 8C | chr5:883713-885158 FORWARD
LENGTH=206
Length = 206
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 12/125 (9%)
Query: 47 VVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPEL-R 105
V +DG + L +WDTAGQE + + YRGA LL + + ++S+ N+ + W+ + +
Sbjct: 47 VELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNI-RNWMKNIEQ 105
Query: 106 HYAPGVPIILVGTKLDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQN 165
H + V ILVG K D+ + K+ AVP TA+G+ L G + E S+KT N
Sbjct: 106 HASDNVNKILVGNKADMDESKR-------AVP--TAKGQALADEYGIKFF-ETSAKTNLN 155
Query: 166 IKAVF 170
++ VF
Sbjct: 156 VENVF 160
>AT5G27540.2 | Symbols: MIRO1 | MIRO-related GTP-ase 1 |
chr5:9722816-9727112 FORWARD LENGTH=648
Length = 648
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQED 66
++ V VGD GK+ L+++ +++FP + VP V ++ + + + + DT+ + +
Sbjct: 18 VRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTSSRPE 76
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK 126
+ + AD +L ++ + E +++ W+PELR +PII+ G KLD RDD
Sbjct: 77 DRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDFRDDN 136
Query: 127 QFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
PI ++ R++ IECS+ Q + VF
Sbjct: 137 NQVSLEQVMSPIM----QQFREI---ETCIECSALKQLQAQEVF 173
>AT5G27540.1 | Symbols: MIRO1, emb2473 | MIRO-related GTP-ase 1 |
chr5:9722816-9727112 FORWARD LENGTH=648
Length = 648
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQED 66
++ V VGD GK+ L+++ +++FP + VP V ++ + + + + DT+ + +
Sbjct: 18 VRIVVVGDKGTGKSSLIVAAATDSFPPN-VPPVLPDYKLPIEFFPDGIPVTIVDTSSRPE 76
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK 126
+ + AD +L ++ + E +++ W+PELR +PII+ G KLD RDD
Sbjct: 77 DRDIVAEELKRADAVVLTYACDRPETLERLSEYWLPELRRLEVKIPIIVAGCKLDFRDDN 136
Query: 127 QFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
PI ++ R++ IECS+ Q + VF
Sbjct: 137 NQVSLEQVMSPIM----QQFREI---ETCIECSALKQLQAQEVF 173
>AT1G52280.1 | Symbols: AtRABG3d, RABG3d | RAB GTPase homolog G3D |
chr1:19468150-19469449 REVERSE LENGTH=206
Length = 206
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
MS+ R +K + +GD VGKT L+ + + F Y T+ +F + V +D L
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVP 112
+WDTAGQE + L YRGAD +L + + S++N+ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNL-NNWREEFLIQASPSDPENFP 119
Query: 113 IILVGTKLDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFD 171
+++G K D+ K A ++G P Y E S+K N+ A F+
Sbjct: 120 FVVLGNKTDVDGGKSRVVSEKKAKAWCASKG-------NIP-YFETSAKEGFNVDAAFE 170
>AT5G55080.1 | Symbols: AtRAN4, RAN4 | ras-related nuclear protein 4
| chr5:22351576-22353058 REVERSE LENGTH=222
Length = 222
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 2/117 (1%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K + VGDG GKT L + + F + PT+ D + + + + WDTAGQE
Sbjct: 14 FKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRGKIRFECWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDL 122
Y+ L+ Y ++ F + ++ +Y N+ +W +LR +PI+L G K+D+
Sbjct: 74 KYSGLKDAYYIHGQCAIIMFDVTARHTYMNI-DRWYRDLRRVCKNIPIVLCGNKVDV 129
>AT3G09910.3 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQED 66
K + +GD VGK+ LL+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDLRD 124
+ L +RG+ +L + + + ++ N+A W E+ Y+ I LVG K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 125 DKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFD 171
+++ ++ +G L K + ++ ECS++T++N+ F+
Sbjct: 134 ERK----------VSREEGMALAKDLNC-LFHECSARTRENVNGCFE 169
>AT3G09910.2 | Symbols: RABC2b | RAB GTPase homolog C2B |
chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQED 66
K + +GD VGK+ LL+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDLRD 124
+ L +RG+ +L + + + ++ N+A W E+ Y+ I LVG K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 125 DKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFD 171
+++ ++ +G L K + ++ ECS++T++N+ F+
Sbjct: 134 ERK----------VSREEGMALAKDLNC-LFHECSARTRENVNGCFE 169
>AT3G09910.1 | Symbols: ATRAB18C, ATRABC2B, RABC2b | RAB GTPase
homolog C2B | chr3:3036864-3038121 REVERSE LENGTH=205
Length = 205
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 88/167 (52%), Gaps = 15/167 (8%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFS-ANVVVDGSTVNLGLWDTAGQED 66
K + +GD VGK+ LL+S+ S++ D PT+ +F + V G + L +WDTAGQE
Sbjct: 15 KILLIGDSGVGKSSLLLSFISSSVE-DLAPTIGVDFKIKQMKVRGKRLKLTIWDTAGQEK 73
Query: 67 YNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPII--LVGTKLDLRD 124
+ L +RG+ +L + + + ++ N+A W E+ Y+ I LVG K+D
Sbjct: 74 FRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDCIKMLVGNKVDRES 133
Query: 125 DKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFD 171
+++ ++ +G L K + ++ ECS++T++N+ F+
Sbjct: 134 ERK----------VSREEGMALAKDLNC-LFHECSARTRENVNGCFE 169
>AT3G16100.1 | Symbols: ATRABG3C, ATRAB7D, RABG3c | RAB GTPase
homolog G3C | chr3:5459270-5460556 FORWARD LENGTH=206
Length = 206
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 17/179 (9%)
Query: 1 MSASR--FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLG 57
M++ R +K + +GD VGKT L+ + + F Y T+ +F + V +D L
Sbjct: 1 MASRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 58 LWDTAGQEDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVP 112
+WDTAGQE + L YRGAD +L + S+EN+ W E L +P P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENL-NNWREEFLIQASPSDPENFP 119
Query: 113 IILVGTKLDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVFD 171
+++G K D+ D + +T + + G Y E S+K N+ A F+
Sbjct: 120 FVVLGNKTDV--------DGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFE 170
>AT3G63150.1 | Symbols: MIRO2, ATCBG | MIRO-related GTP-ase 2 |
chr3:23329200-23332692 REVERSE LENGTH=643
Length = 643
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQED 66
++ GD GK+ L+ + S TFP D VP V + + + + DT D
Sbjct: 15 LRVAVAGDKGTGKSSLISAVASETFP-DNVPRVLPPITLPADAFPDYIPITIVDTPSSID 73
Query: 67 YNRLRPLS-YRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDD 125
NR++ + +R ADV LL ++ ++ + ++ W+PELR P+I+VG KLDLRD+
Sbjct: 74 -NRIKLIEEFRKADVVLLTYACDQPSTLDRLSSYWLPELRRLEIKAPVIVVGCKLDLRDE 132
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ + PI +E R++ IECS+ T + VF
Sbjct: 133 RSPARLEDIMSPIM----KEYREI---ETCIECSALTLIQVPDVF 170
>AT1G49300.2 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD LENGTH=206
Length = 206
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVPIILVGTK 119
E + L YRGAD +L + + S S+E++ W E L +P P +++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSAKSFEDL-NNWREEFLIQASPSDPENFPFVVIGNK 126
Query: 120 LDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+D+ D + ++ + G Y E S+K N++ F
Sbjct: 127 IDV--------DGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAF 169
>AT1G49300.1 | Symbols: ATRAB7, ATRABG3E, RABG3E | RAB GTPase
homolog G3E | chr1:18234842-18236968 FORWARD LENGTH=206
Length = 206
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y + F Y T+ +F + V + L +WDTAGQ
Sbjct: 8 LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAP----GVPIILVGTK 119
E + L YRGAD +L + + S S+E++ W E L +P P +++G K
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNSAKSFEDL-NNWREEFLIQASPSDPENFPFVVIGNK 126
Query: 120 LDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+D+ D + ++ + G Y E S+K N++ F
Sbjct: 127 IDV--------DGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAF 169
>AT4G09720.1 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=206
Length = 206
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y F Y T+ +F + + + V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAPG----VPIILVGTK 119
E + L YRGAD L + + S++N+ + W E L+ +P P I++G K
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQASPSDPKTFPFIVLGNK 126
Query: 120 LDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+D+ D + ++ + + G Y E S+K N+ F
Sbjct: 127 IDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAF 169
>AT5G20020.1 | Symbols: RAN2 | RAS-related GTP-binding nuclear
protein 2 | chr5:6762817-6764381 FORWARD LENGTH=221
Length = 221
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDD 125
+ LR Y ++ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ A +T + + L+ Y E S+K+ N + F
Sbjct: 133 Q------VKAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>AT5G55190.1 | Symbols: RAN3, ATRAN3 | RAN GTPase 3 |
chr5:22392285-22393957 FORWARD LENGTH=221
Length = 221
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDD 125
+ LR Y ++ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ A +T + + L+ Y E S+K+ N + F
Sbjct: 133 QV------KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>AT5G20010.1 | Symbols: RAN-1, RAN1, ATRAN1 | RAS-related nuclear
protein-1 | chr5:6760364-6761747 FORWARD LENGTH=221
Length = 221
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTV-FDNFSANVVVDGSTVNLGLWDTAGQE 65
K V VGDG GKT + + + F Y PT+ + + + + WDTAGQE
Sbjct: 14 FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDD 125
+ LR Y ++ F + ++ +Y+NV W +L +PI+L G K+D+++
Sbjct: 74 KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVP-TWHRDLCRVCENIPIVLCGNKVDVKNR 132
Query: 126 KQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
+ A +T + + L+ Y E S+K+ N + F
Sbjct: 133 QV------KAKQVTFHRKKNLQ-------YYEISAKSNYNFEKPF 164
>AT4G09720.4 | Symbols: RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=211
Length = 211
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 76/176 (43%), Gaps = 20/176 (11%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y F Y T+ +F + + + V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGV----------PII 114
E + L YRGAD L + + S++N+ + W E A + P I
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQAWNIGMCPSDPKTFPFI 126
Query: 115 LVGTKLDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
++G K+D+ D + ++ + + G Y E S+K N+ F
Sbjct: 127 VLGNKIDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAF 174
>AT4G09720.3 | Symbols: ATRABG3A, RABG3A | RAB GTPase homolog G3A |
chr4:6133101-6134959 FORWARD LENGTH=217
Length = 217
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 6 FIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNF-SANVVVDGSTVNLGLWDTAGQ 64
+K + +GD VGKT L+ Y F Y T+ +F + + + V L +WDTAGQ
Sbjct: 8 LLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWDTAGQ 67
Query: 65 EDYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGV------------- 111
E + L YRGAD L + + S++N+ + W E A +
Sbjct: 68 ERFQSLGAAFYRGADCCALVYDVNVLRSFDNL-ETWHEEFLKQAWNIGMWTIAEASPSDP 126
Query: 112 ---PIILVGTKLDLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKA 168
P I++G K+D+ D + ++ + + G Y E S+K N+
Sbjct: 127 KTFPFIVLGNKIDV--------DGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDE 178
Query: 169 VF 170
F
Sbjct: 179 AF 180
>AT5G39620.1 | Symbols: AtRABG1, RABG1 | RAB GTPase homolog G1 |
chr5:15864166-15865782 REVERSE LENGTH=204
Length = 204
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 15/170 (8%)
Query: 7 IKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVF-DNFSANVVVDGSTVNLGLWDTAGQE 65
+K + +GD VGKT LL Y F + T++ D + + + V L +WDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 66 DYNRLRPLSYRGADVFLLAFSLISKASYENVAKKWIPE-LRHYAPGV----PIILVGTKL 120
+ L YR D +L + + + ++E++ W E ++ P P +L+G K
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESI-DNWHDEFIKQANPETPTKFPFVLMGNKT 124
Query: 121 DLRDDKQFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
D+ + K P V A ++ G +Y E S+K + N++ F
Sbjct: 125 DVNNGK------PRVVAKEIA--DQWCGSKGNIVYFETSAKAKINVEEAF 166
>AT5G54840.1 | Symbols: ATSGP1, SGP1 | Ras-related small GTP-binding
family protein | chr5:22276611-22278328 REVERSE
LENGTH=288
Length = 288
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 67/164 (40%), Gaps = 8/164 (4%)
Query: 8 KCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDY 67
K +GD GKT ++ Y + + T + V G T++ +WD G E
Sbjct: 103 KISLLGDCQTGKTTFVVKYVGDENQSFLEMTGLNLMDKTFYVQGVTISFSIWDVGGDEKR 162
Query: 68 NRLR-PLSYRGADVFLLAFSLISKASYENVAKKWIPELRHYAPGVPIILVGTKLDLRDDK 126
++ P++ + A L F L S+++ +V W + R + IL+GTK D
Sbjct: 163 SKDHIPIACKDAVAILFMFDLTSRSTLNSVF-GWYSQARKWNKTAIPILIGTKFD----- 216
Query: 127 QFFQDHPGAVPITTAQGEELRKLIGAPMYIECSSKTQQNIKAVF 170
F + P Q K++ A ++ S+ N+ +F
Sbjct: 217 DFVRLPPNLQWTIVTQARAYAKVMNASLFFS-SATHNINVNKIF 259