Miyakogusa Predicted Gene
- Lj1g3v3330180.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3330180.2 Non Chatacterized Hit- tr|I1K6W0|I1K6W0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6710
PE=,84.41,0,seg,NULL; tRNA-synt_2c,Alanyl-tRNA synthetase, class IIc,
N-terminal; tRNA_SAD,Threonyl/alanyl tRNA ,CUFF.30463.2
(974 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G22800.1 | Symbols: EMB86, EMB1030, EMB263 | Alanyl-tRNA synt... 1244 0.0
AT1G50200.2 | Symbols: ALATS | Alanyl-tRNA synthetase | chr1:185... 412 e-115
AT1G50200.1 | Symbols: ALATS, ACD | Alanyl-tRNA synthetase | chr... 412 e-115
AT1G49930.1 | Symbols: | BEST Arabidopsis thaliana protein matc... 51 5e-06
>AT5G22800.1 | Symbols: EMB86, EMB1030, EMB263 | Alanyl-tRNA
synthetase, class IIc | chr5:7616221-7619961 REVERSE
LENGTH=978
Length = 978
Score = 1244 bits (3220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/900 (68%), Positives = 713/900 (79%), Gaps = 3/900 (0%)
Query: 77 VSGDSIRDRFLRFYASRGHKVLPSASLIPDDPTVLLTIAGMLQFKPIFLGKIPRQVSRAT 136
VSGDSIR RFL F+ASRGHKVLPS+SL+P+DPTVLLTIAGMLQFKPIFLGK+PR+V AT
Sbjct: 78 VSGDSIRRRFLEFFASRGHKVLPSSSLVPEDPTVLLTIAGMLQFKPIFLGKVPREVPCAT 137
Query: 137 TSQRCIRTNDINNVGLTSRHQTFFEMLGNFSFGDYFKKQAIQWAWELSTLEFGLPPDRLW 196
T+QRCIRTND+ NVG T+RH TFFEMLGNFSFGDYFKK+AI+WAWELST+EFGLP +R+W
Sbjct: 138 TAQRCIRTNDLENVGKTARHHTFFEMLGNFSFGDYFKKEAIKWAWELSTIEFGLPANRVW 197
Query: 197 ISVYENDDEAFHLWSHEVGVPVERIKRLGEEDNFWTSGVTGPCGPCSEIYYDFHPERGY- 255
+S+YE+DDEAF +W +EVGV VERIKR+GE DNFWTSG TGPCGPCSE+YYDF+PERGY
Sbjct: 198 VSIYEDDDEAFEIWKNEVGVSVERIKRMGEADNFWTSGPTGPCGPCSELYYDFYPERGYD 257
Query: 256 MDADLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERMARILQKVPNNYET 315
D DLGDDTRFIEFYNLVFMQYNK +DG LEPLKQKNIDTGLGLER+A+ILQKVPNNYET
Sbjct: 258 EDVDLGDDTRFIEFYNLVFMQYNKTEDGLLEPLKQKNIDTGLGLERIAQILQKVPNNYET 317
Query: 316 DLIFPIIEKASELANVSYSISDDLTKRNLKIIGDHMRAIVFLISDGVVPSNXXXXXXXXX 375
DLI+PII K SELAN+SY ++D K +LK+I DHMRA+V+LISDGV PSN
Sbjct: 318 DLIYPIIAKISELANISYDSANDKAKTSLKVIADHMRAVVYLISDGVSPSNIGRGYVVRR 377
Query: 376 XXXXXXXXXXXXXIKGDGKGDPEGAFVPIIAEKVVELSTHIDADVKNRSPXXXXXXXXXX 435
I GD G+ +GAF+P +AEKV+ELST+ID+DVK ++
Sbjct: 378 LIRRAVRKGKSLGINGDMNGNLKGAFLPAVAEKVIELSTYIDSDVKLKASRIIEEIRQEE 437
Query: 436 XXFVQTXXXXXXXXXXXXXXXXSSAGRNGTVPCLAGEDVFLLYDTYGFPMEITKEVAEER 495
F +T S A + P L G+D FLLYDT+GFP+EIT EVAEER
Sbjct: 438 LHFKKTLERGEKLLDQKLNDALSIADKTKDTPYLDGKDAFLLYDTFGFPVEITAEVAEER 497
Query: 496 GVSIDMNGFEMEMDKQRRQSQAAHNTVKLSIGNGANIAENVPDTEFIGYDSLYCKAIVES 555
GVSIDMNGFE+EM+ QRRQSQAAHN VKL++ + A++ +N+ DTEF+GYDSL +A+V+S
Sbjct: 498 GVSIDMNGFEVEMENQRRQSQAAHNVVKLTVEDDADMTKNIADTEFLGYDSLSARAVVKS 557
Query: 556 LVVNGDPAVQVSEGSNVEILLNKTPFYAESGGQIGDHGFLYISGDENQQKAVVEIIDVQK 615
L+VNG P ++VSEGS VE+LL++TPFYAESGGQI DHGFLY+S D NQ+KAVVE+ DVQK
Sbjct: 558 LLVNGKPVIRVSEGSEVEVLLDRTPFYAESGGQIADHGFLYVSSDGNQEKAVVEVSDVQK 617
Query: 616 SLGNIFVHKGTVRKXXXXXXXXXXXXXXXKLRHRAKVHHTATHLLQAALKKVIGQETSQA 675
SL IFVHKGTV+ LR RAKVHHTATHLLQ+ALKKV+GQETSQA
Sbjct: 618 SL-KIFVHKGTVKSGALEVGKEVEAAVDADLRQRAKVHHTATHLLQSALKKVVGQETSQA 676
Query: 676 GSLVAFDRLRFDFNFHRPLLDSELAEIEVLINGWIEDAVLLQTKVMPLSDAKRAGAIAMF 735
GSLVAFDRLRFDFNF+R L D+EL EIE LIN WI DA L+TKV+PL+DAKRAGAIAMF
Sbjct: 677 GSLVAFDRLRFDFNFNRSLHDNELEEIECLINRWIGDATRLETKVLPLADAKRAGAIAMF 736
Query: 736 GEKYGE-EVRVVDVPGVSLELCGGTHVGNTSEIRGFKIISEQGIASGIRRIEAVAGEACI 794
GEKY E EVRVV+VPGVS+ELCGGTHVGNT+EIR FKIISEQGIASGIRRIEAVAGEA I
Sbjct: 737 GEKYDENEVRVVEVPGVSMELCGGTHVGNTAEIRAFKIISEQGIASGIRRIEAVAGEAFI 796
Query: 795 EYVNSRDFYLKQLCSTLKVKPEEVTARIENLLEELRIARNEIXXXXXXXXXXXXXXXXXX 854
EY+NSRD + +LCSTLKVK E+VT R+ENLLEELR AR E
Sbjct: 797 EYINSRDSQMTRLCSTLKVKAEDVTNRVENLLEELRAARKEASDLRSKAAVYKASVISNK 856
Query: 855 XLLIGNSKQYRVLVECLDDVDAESLKSAAEYLVETLTDPAAVVLGSCPGEGKVSLVAAFT 914
+G S+ RVLVE +DD DA+SLKSAAE+L+ TL DP AVVLGS P + KVSLVAAF+
Sbjct: 857 AFTVGTSQTIRVLVESMDDTDADSLKSAAEHLISTLEDPVAVVLGSSPEKDKVSLVAAFS 916
Query: 915 PGVVDRGIQAGKFIGQIAKLCGGGGGGRPNFAQAGGRKPENLTSALEKAKSELIATLSEK 974
PGVV G+QAGKFIG IAKLCGGGGGG+PNFAQAGGRKPENL SALEKA+ +L+ATLSEK
Sbjct: 917 PGVVSLGVQAGKFIGPIAKLCGGGGGGKPNFAQAGGRKPENLPSALEKAREDLVATLSEK 976
>AT1G50200.2 | Symbols: ALATS | Alanyl-tRNA synthetase |
chr1:18591429-18598167 REVERSE LENGTH=963
Length = 963
Score = 412 bits (1060), Expect = e-115, Method: Compositional matrix adjust.
Identities = 260/772 (33%), Positives = 399/772 (51%), Gaps = 81/772 (10%)
Query: 82 IRDRFLRFYASRGHKVLPSASLIP-DDPTVLLTIAGMLQFKPIFLGKIP-----RQVSRA 135
+RD ++ F+ +GHK PS+ ++P +DPT+L AGM Q+KPIFLG ++SRA
Sbjct: 16 VRDTYVDFFRGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFLGTADPNTELSKLSRA 75
Query: 136 TTSQRCIRT----NDINNVGLTSRHQTFFEMLGNFSFGDYFKKQAIQWAWELSTLEFGLP 191
+Q+CIR ND+++VG + H TFFEMLGN+SFGDYFKK+AI+WAWEL T +GLP
Sbjct: 76 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTKVYGLP 135
Query: 192 PDRLWISVY--------ENDDEAFHLWSHEVGVPVERIKRLGEEDNFWTSGVTGPCGPCS 243
DR++ + + + D+EA +W + P R+ G +DNFW G TGPCGPC+
Sbjct: 136 TDRIYATYFGGDEKAGLQPDNEARDIWLKVL--PSGRVLPFGCKDNFWEMGDTGPCGPCT 193
Query: 244 EIYYDFHPERGYMDADLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERMA 303
EI+YD R DD +E +NLVF+Q+N++ DGSL+PL K++DTG+G ER+
Sbjct: 194 EIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPAKHVDTGMGFERLT 253
Query: 304 RILQKVPNNYETDLIFPI---IEKASELANVSYSIS-DDLTKRNL--KIIGDHMRAIVFL 357
+LQ +NY+TD+ PI I+KA+ S + +D+ + ++ +++ DH+R + F
Sbjct: 254 SVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVDMAYRVVADHIRTLSFA 313
Query: 358 ISDGVVPSNXXXXXXXXXXXXXXXXXXXXXXIKGDGKGDPEGAFVPIIAEKVVELSTHID 417
I+DG P N G E F + V+ + +
Sbjct: 314 IADGSRPGNEGREYVLRRILRRAVRY-------GKEILKAEEGFFNGLVSSVIRVMGDVF 366
Query: 418 ADVKNRSPXXXXXXXXXXXXFVQTXXXXXXXXXXXXXXXXSSAGRNGTVPCLAGEDVFLL 477
++K F +T AG+ L+G+D F+L
Sbjct: 367 TELKEHEKKITDIIKEEEASFCKT--------LAKGIEKFRKAGQAVQGNTLSGDDAFIL 418
Query: 478 YDTYGFPMEITKEVAEERGVSIDMNGFEMEMDKQRRQSQAAHNTV----------KLSIG 527
+DTYGFP+++T+ +AEERG+ +D++GF M++ R +S++A N S
Sbjct: 419 WDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTL 478
Query: 528 NGANIAENVPDTEFIGYDSLYCKAIVESLVVNGDPAVQVSEGS-NVEILLNKTPFYAESG 586
+ A ++ ++I + + + G ++ S S NV ++L T FYAE G
Sbjct: 479 HKAGVSATDDSFKYIWFQDHESEL---KAIYTGSTFLESSAASDNVGLVLGSTSFYAEQG 535
Query: 587 GQIGDHGFLYISGDENQQKAVVEIIDVQKSLGNIFVHKGTVRKXXXXXXXXXXXXXXXKL 646
GQI D G + S + +VQ G +H G + K
Sbjct: 536 GQIFDTGLIEGSF------GTFNVCNVQ-IFGGFVLHIGYLSKETGEVSVGDKVICKVDY 588
Query: 647 RHRAKV--HHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDSELAEIEV 704
R + +HT TH+L ALK+V+G Q GS+V ++LRFDF+ +P+ +L IE
Sbjct: 589 ERRKLIAPNHTCTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIES 648
Query: 705 LINGWIEDAVLLQTKVMPLSDAKR-AGAIAMFGEKYGEEVRVVDV--------------- 748
++N I+D + + +K LS+AKR G A+FGE Y + VRVV +
Sbjct: 649 IVNKQIKDELDVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNE 708
Query: 749 -PGVSLELCGGTHVGNTSEIRGFKIISEQGIASGIRRIEAVAGEACIEYVNS 799
+S E CGGTH+ NT E + F ++SE+GIA GIRR+ AV E + +N+
Sbjct: 709 WSLLSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNA 760
>AT1G50200.1 | Symbols: ALATS, ACD | Alanyl-tRNA synthetase |
chr1:18591429-18598311 REVERSE LENGTH=1003
Length = 1003
Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust.
Identities = 260/772 (33%), Positives = 399/772 (51%), Gaps = 81/772 (10%)
Query: 82 IRDRFLRFYASRGHKVLPSASLIP-DDPTVLLTIAGMLQFKPIFLGKIP-----RQVSRA 135
+RD ++ F+ +GHK PS+ ++P +DPT+L AGM Q+KPIFLG ++SRA
Sbjct: 64 VRDTYVDFFRGKGHKFWPSSPVVPHNDPTLLFANAGMNQYKPIFLGTADPNTELSKLSRA 123
Query: 136 TTSQRCIRT----NDINNVGLTSRHQTFFEMLGNFSFGDYFKKQAIQWAWELSTLEFGLP 191
+Q+CIR ND+++VG + H TFFEMLGN+SFGDYFKK+AI+WAWEL T +GLP
Sbjct: 124 CNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKKEAIEWAWELLTKVYGLP 183
Query: 192 PDRLWISVY--------ENDDEAFHLWSHEVGVPVERIKRLGEEDNFWTSGVTGPCGPCS 243
DR++ + + + D+EA +W + P R+ G +DNFW G TGPCGPC+
Sbjct: 184 TDRIYATYFGGDEKAGLQPDNEARDIWLKVL--PSGRVLPFGCKDNFWEMGDTGPCGPCT 241
Query: 244 EIYYDFHPERGYMDADLGDDTRFIEFYNLVFMQYNKKDDGSLEPLKQKNIDTGLGLERMA 303
EI+YD R DD +E +NLVF+Q+N++ DGSL+PL K++DTG+G ER+
Sbjct: 242 EIHYDRIGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPAKHVDTGMGFERLT 301
Query: 304 RILQKVPNNYETDLIFPI---IEKASELANVSYSIS-DDLTKRNL--KIIGDHMRAIVFL 357
+LQ +NY+TD+ PI I+KA+ S + +D+ + ++ +++ DH+R + F
Sbjct: 302 SVLQNKMSNYDTDVFMPIFDDIQKATGARPYSGKVGPEDVDRVDMAYRVVADHIRTLSFA 361
Query: 358 ISDGVVPSNXXXXXXXXXXXXXXXXXXXXXXIKGDGKGDPEGAFVPIIAEKVVELSTHID 417
I+DG P N G E F + V+ + +
Sbjct: 362 IADGSRPGNEGREYVLRRILRRAVRY-------GKEILKAEEGFFNGLVSSVIRVMGDVF 414
Query: 418 ADVKNRSPXXXXXXXXXXXXFVQTXXXXXXXXXXXXXXXXSSAGRNGTVPCLAGEDVFLL 477
++K F +T AG+ L+G+D F+L
Sbjct: 415 TELKEHEKKITDIIKEEEASFCKT--------LAKGIEKFRKAGQAVQGNTLSGDDAFIL 466
Query: 478 YDTYGFPMEITKEVAEERGVSIDMNGFEMEMDKQRRQSQAAHNTV----------KLSIG 527
+DTYGFP+++T+ +AEERG+ +D++GF M++ R +S++A N S
Sbjct: 467 WDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTL 526
Query: 528 NGANIAENVPDTEFIGYDSLYCKAIVESLVVNGDPAVQVSEGS-NVEILLNKTPFYAESG 586
+ A ++ ++I + + + G ++ S S NV ++L T FYAE G
Sbjct: 527 HKAGVSATDDSFKYIWFQDHESEL---KAIYTGSTFLESSAASDNVGLVLGSTSFYAEQG 583
Query: 587 GQIGDHGFLYISGDENQQKAVVEIIDVQKSLGNIFVHKGTVRKXXXXXXXXXXXXXXXKL 646
GQI D G + S + +VQ G +H G + K
Sbjct: 584 GQIFDTGLIEGSF------GTFNVCNVQ-IFGGFVLHIGYLSKETGEVSVGDKVICKVDY 636
Query: 647 RHRAKV--HHTATHLLQAALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDSELAEIEV 704
R + +HT TH+L ALK+V+G Q GS+V ++LRFDF+ +P+ +L IE
Sbjct: 637 ERRKLIAPNHTCTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIES 696
Query: 705 LINGWIEDAVLLQTKVMPLSDAKR-AGAIAMFGEKYGEEVRVVDV--------------- 748
++N I+D + + +K LS+AKR G A+FGE Y + VRVV +
Sbjct: 697 IVNKQIKDELDVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNE 756
Query: 749 -PGVSLELCGGTHVGNTSEIRGFKIISEQGIASGIRRIEAVAGEACIEYVNS 799
+S E CGGTH+ NT E + F ++SE+GIA GIRR+ AV E + +N+
Sbjct: 757 WSLLSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNA 808
>AT1G49930.1 | Symbols: | BEST Arabidopsis thaliana protein match
is: Alanyl-tRNA synthetase, class IIc
(TAIR:AT5G22800.1); Has 21 Blast hits to 21 proteins in
10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 21; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr1:18484932-18485639 FORWARD
LENGTH=134
Length = 134
Score = 50.8 bits (120), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 871 LDDVDAESLKSAAEYLVETLTDPAAVVLGSCPGEGKV 907
+DD DA+SLKSAAE+L+ TL DP VVLGS P + K+
Sbjct: 1 MDDTDADSLKSAAEHLISTLDDPVVVVLGSSPEKDKL 37