Miyakogusa Predicted Gene
- Lj1g3v3329970.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3329970.1 Non Chatacterized Hit- tr|I1JSB1|I1JSB1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35760
PE,74.73,0,CYCLINS,Cyclin, N-terminal; domain present in cyclins,
TFIIB and Retinob,Cyclin-like; seg,NULL; no d,CUFF.30450.1
(362 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 | chr1:28628046-286... 398 e-111
AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137... 386 e-107
AT4G35620.1 | Symbols: CYCB2;2 | Cyclin B2;2 | chr4:16901744-169... 317 8e-87
AT2G17620.1 | Symbols: CYCB2;1 | Cyclin B2;1 | chr2:7664164-7666... 314 6e-86
AT1G20590.1 | Symbols: | Cyclin family protein | chr1:7131166-7... 260 1e-69
AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 | chr3:362547... 258 6e-69
AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein ... 254 5e-68
AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 | chr4... 225 3e-59
AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 | chr2:11401551-114... 222 3e-58
AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587... 220 1e-57
AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 | ... 180 1e-45
AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817... 170 2e-42
AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 | chr1:16775035-167... 167 1e-41
AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like cy... 164 8e-41
AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase... 164 1e-40
AT1G15570.1 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365... 161 5e-40
AT1G80370.1 | Symbols: CYCA2;4 | Cyclin A2;4 | chr1:30214694-302... 157 8e-39
AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 | chr5:17293227-172... 155 3e-38
AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173... 152 4e-37
AT1G47230.2 | Symbols: CYCA3;4 | CYCLIN A3;4 | chr1:17306752-173... 147 1e-35
AT1G47220.1 | Symbols: CYCA3;3 | Cyclin A3;3 | chr1:17303676-173... 143 2e-34
AT1G34460.1 | Symbols: CYCB1;5, CYC3 | CYCLIN B1;5 | chr1:125951... 117 1e-26
AT1G34460.2 | Symbols: CYCB1;5 | CYCLIN B1;5 | chr1:12595110-125... 117 1e-26
AT1G47210.1 | Symbols: CYCA3;2 | cyclin-dependent protein kinase... 67 1e-11
AT1G70210.1 | Symbols: CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 | chr1:2... 62 6e-10
AT1G14750.1 | Symbols: SDS | Cyclin family protein | chr1:507967... 60 2e-09
AT1G14750.2 | Symbols: SDS | Cyclin family protein | chr1:507967... 59 4e-09
AT4G34160.1 | Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 | chr4:16357... 50 3e-06
AT3G50070.1 | Symbols: CYCD3;3 | CYCLIN D3;3 | chr3:18565322-185... 49 4e-06
AT5G02110.1 | Symbols: CYCD7;1, CYCD7 | CYCLIN D7;1 | chr5:41708... 49 5e-06
>AT1G76310.1 | Symbols: CYCB2;4 | CYCLIN B2;4 |
chr1:28628046-28630199 REVERSE LENGTH=431
Length = 431
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/321 (61%), Positives = 238/321 (74%), Gaps = 8/321 (2%)
Query: 47 LDSAIIDNGEYEDAVPVFVKHTEAMLXXXXXXXXXXX-------XXXXXXXXXXXACDRN 99
LD I D E + P+FV+HTEAML +CD+N
Sbjct: 110 LDRIITDVEEGDFNEPMFVQHTEAMLEEIDKMEGIEMQDSNDIDAEVEESVMDIDSCDKN 169
Query: 100 DPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXXXXXX 159
+PL+VVEYI+DIYCFYKK E SCV P YM +Q DINE+MR IL DWLIEVHYK
Sbjct: 170 NPLSVVEYINDIYCFYKKNECRSCVPPNYMENQHDINERMRGILFDWLIEVHYKFELMEE 229
Query: 160 XXXXXVNLIDRFLAC-QTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRN 218
+NLIDRFLA Q + RKKLQLVGVTAML+ACKYEEVSVP V+D ILI+DKAYTR
Sbjct: 230 TLYLTINLIDRFLAVHQHIARKKLQLVGVTAMLLACKYEEVSVPVVDDLILISDKAYTRT 289
Query: 219 EVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSFFLIELCLVECKMLKFS 278
E+L+MEKLM NTLQFN +PTPYVFMRRFLKAA SDKKLELLSFF+IELCLVE +ML+++
Sbjct: 290 EILDMEKLMANTLQFNFCLPTPYVFMRRFLKAAQSDKKLELLSFFMIELCLVEYEMLQYT 349
Query: 279 PSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSGKLTGVY 338
PS LAA+AIYTAQ +L ++ W+KTSE+++GY+EE LLECSR MV H KAG+GKLTGV+
Sbjct: 350 PSQLAASAIYTAQSTLKGYEDWSKTSEFHSGYTEEALLECSRKMVGLHHKAGTGKLTGVH 409
Query: 339 RKYSSLKYGCAAKVEPAHFVL 359
RKY++ K+G AA++EPA F+L
Sbjct: 410 RKYNTSKFGYAARIEPAGFLL 430
>AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137273
REVERSE LENGTH=429
Length = 429
Score = 386 bits (992), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 240/328 (73%), Gaps = 9/328 (2%)
Query: 41 STPSNQLDSAIIDNGEYEDAV-----PVFVKHTEAMLXXXXXXXXXXXXXXXXXXXX--- 92
S S + ++ IID E + P+FV+HTEAML
Sbjct: 102 SVSSEEPETIIIDVDESDKEGGDSNEPMFVQHTEAMLEEIEQMEKEIEMEDADKEEEPVI 161
Query: 93 -XXACDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVH 151
ACD+N+PLA VEYI D++ FYK EK SCV P YM +Q D+NE+MR IL+DWLIEVH
Sbjct: 162 DIDACDKNNPLAAVEYIHDMHTFYKNFEKLSCVPPNYMDNQQDLNERMRGILIDWLIEVH 221
Query: 152 YKXXXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILIT 211
YK +N+IDRFLA ++RKKLQLVGVTA+L+ACKYEEVSVP V+D ILI+
Sbjct: 222 YKFELMEETLYLTINVIDRFLAVHQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLILIS 281
Query: 212 DKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSFFLIELCLVE 271
DKAY+R EVL+MEKLM NTLQFN S+PTPYVFM+RFLKAA SDKKLE+LSFF+IELCLVE
Sbjct: 282 DKAYSRREVLDMEKLMANTLQFNFSLPTPYVFMKRFLKAAQSDKKLEILSFFMIELCLVE 341
Query: 272 CKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAGS 331
+ML++ PS LAA+AIYTAQC+L F++W+KT E++TGY+E+QLL C+R MV +H KAG+
Sbjct: 342 YEMLEYLPSKLAASAIYTAQCTLKGFEEWSKTCEFHTGYNEKQLLACARKMVAFHHKAGT 401
Query: 332 GKLTGVYRKYSSLKYGCAAKVEPAHFVL 359
GKLTGV+RKY++ K+ AA+ EPA F++
Sbjct: 402 GKLTGVHRKYNTSKFCHAARTEPAGFLI 429
>AT4G35620.1 | Symbols: CYCB2;2 | Cyclin B2;2 |
chr4:16901744-16903766 FORWARD LENGTH=429
Length = 429
Score = 317 bits (812), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 164/264 (62%), Positives = 206/264 (78%), Gaps = 1/264 (0%)
Query: 97 DRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXXX 156
D N+ LA VEY+ D+Y FY+KTE+ SCV YM QFDI++KMRAIL+DWLIEVH K
Sbjct: 162 DANNSLAAVEYVQDLYDFYRKTERFSCVPLDYMAQQFDISDKMRAILIDWLIEVHDKFEL 221
Query: 157 XXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYT 216
VNLIDRFL+ Q V RKKLQLVG+ A+L+ACKYEEVSVP VED ++I+DKAYT
Sbjct: 222 MNETLFLTVNLIDRFLSKQAVARKKLQLVGLVALLLACKYEEVSVPIVEDLVVISDKAYT 281
Query: 217 RNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSFFLIELCLVECKMLK 276
R +VL MEK+M++TLQFN+S+PT Y F++RFLKAA SDKKLE+L+ FLIEL LV+ +M++
Sbjct: 282 RTDVLEMEKIMLSTLQFNMSLPTQYPFLKRFLKAAQSDKKLEILASFLIELALVDYEMVR 341
Query: 277 FSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSGKLTG 336
+ PSLLAA A+YTAQC+++ F +W T E++ YSE QLLEC R MV HQKAG+ KLTG
Sbjct: 342 YPPSLLAATAVYTAQCTIHGFSEWNSTCEFHCHYSENQLLECCRRMVRLHQKAGTDKLTG 401
Query: 337 VYRKYSSLKYG-CAAKVEPAHFVL 359
V+RKYSS K+G A K E AHF++
Sbjct: 402 VHRKYSSSKFGYIATKYEAAHFLV 425
>AT2G17620.1 | Symbols: CYCB2;1 | Cyclin B2;1 | chr2:7664164-7666261
FORWARD LENGTH=429
Length = 429
Score = 314 bits (804), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 186/393 (47%), Positives = 240/393 (61%), Gaps = 35/393 (8%)
Query: 2 EMAHSHRLPLRSINQNIMD-KDKPCIPNKVS--LSGNQNLLASTPSNQLDS---AIIDNG 55
EM R LR INQN+ + PC+ NK LS Q + DS ++ +G
Sbjct: 31 EMKREKRRVLRVINQNLAGARVYPCVVNKRGSLLSNKQEEEEGCQKKKFDSLRPSVTRSG 90
Query: 56 EYED-------AVP--------VFVKHTEAML--------------XXXXXXXXXXXXXX 86
E+ +VP +F+ EA L
Sbjct: 91 VEEETNKKLKPSVPSANDFGDCIFIDEEEATLDLPMPMSLEKPYIEADPMEEVEMEDVTV 150
Query: 87 XXXXXXXXACDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDW 146
D + LA VEY+ D+Y FY+ E+ SCV YM Q D+NEKMRAIL+DW
Sbjct: 151 EEPIVDIDVLDSKNSLAAVEYVQDLYAFYRTMERFSCVPVDYMMQQIDLNEKMRAILIDW 210
Query: 147 LIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVED 206
LIEVH K VNLIDRFL+ Q V+RKKLQLVG+ A+L+ACKYEEVSVP VED
Sbjct: 211 LIEVHDKFDLINETLFLTVNLIDRFLSKQNVMRKKLQLVGLVALLLACKYEEVSVPVVED 270
Query: 207 FILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSFFLIE 266
+LI+DKAYTRN+VL MEK M++TLQFN+S+PT Y F++RFLKAA +DKK E+L+ FLIE
Sbjct: 271 LVLISDKAYTRNDVLEMEKTMLSTLQFNISLPTQYPFLKRFLKAAQADKKCEVLASFLIE 330
Query: 267 LCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYH 326
L LVE +ML+F PSLLAA ++YTAQC+L ++W T E++ YSE+QL+ECSR +V+ H
Sbjct: 331 LALVEYEMLRFPPSLLAATSVYTAQCTLDGSRKWNSTCEFHCHYSEDQLMECSRKLVSLH 390
Query: 327 QKAGSGKLTGVYRKYSSLKYGCAAKVEPAHFVL 359
Q+A +G LTGVYRKYS+ K+G AK E AHF++
Sbjct: 391 QRAATGNLTGVYRKYSTSKFGYIAKCEAAHFLV 423
>AT1G20590.1 | Symbols: | Cyclin family protein |
chr1:7131166-7132183 REVERSE LENGTH=199
Length = 199
Score = 260 bits (664), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 123/174 (70%), Positives = 149/174 (85%)
Query: 171 FLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLNMEKLMVNT 230
FLA ++RKKLQLVGVTA+L+ACKYEEVSVP V+D ILI+DKAY+R EVL+MEKLM NT
Sbjct: 3 FLAVHQIVRKKLQLVGVTALLLACKYEEVSVPVVDDLILISDKAYSRREVLDMEKLMANT 62
Query: 231 LQFNLSVPTPYVFMRRFLKAAYSDKKLELLSFFLIELCLVECKMLKFSPSLLAAAAIYTA 290
LQFN S+PTPYVFM+RFLKAA SDKKLE+LSFF+IELCLVE +ML++ PS LAA+AIYTA
Sbjct: 63 LQFNFSLPTPYVFMKRFLKAAQSDKKLEILSFFMIELCLVEYEMLEYLPSKLAASAIYTA 122
Query: 291 QCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSGKLTGVYRKYSSL 344
QC+L F++W+KT E++TGY+EEQLL C+R MV +H KAG+GKLTG SS
Sbjct: 123 QCTLKGFEEWSKTCEFHTGYNEEQLLACARKMVAFHHKAGTGKLTGSTTHLSSF 176
>AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 |
chr3:3625475-3627139 REVERSE LENGTH=414
Length = 414
Score = 258 bits (658), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 128/260 (49%), Positives = 177/260 (68%), Gaps = 1/260 (0%)
Query: 96 CDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXX 155
D+ + LA VEY++D+Y FYK+ S YM +Q +I+EKMR+IL+DWL+EVH K
Sbjct: 148 VDKENDLAAVEYVEDMYIFYKEVVNESKPQ-MYMHTQPEIDEKMRSILIDWLVEVHVKFD 206
Query: 156 XXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAY 215
VN+IDRFL+ +TV R++LQLVGV+A+LIA KYEE+ P V D + +TD +Y
Sbjct: 207 LSPETLYLTVNIIDRFLSLKTVPRRELQLVGVSALLIASKYEEIWPPQVNDLVYVTDNSY 266
Query: 216 TRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSFFLIELCLVECKML 275
++L MEK ++ L++ L+VPT YVF+ RF+KA+ SD+KLE L FL EL L+ L
Sbjct: 267 NSRQILVMEKTILGNLEWYLTVPTQYVFLVRFIKASGSDQKLENLVHFLAELGLMHHDSL 326
Query: 276 KFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSGKLT 335
F PS+LAA+A+YTA+C L + WT T +++TGYSE QL++CS+L+ H KAG KL
Sbjct: 327 MFCPSMLAASAVYTARCCLNKTPTWTDTLKFHTGYSESQLMDCSKLLAFIHSKAGESKLR 386
Query: 336 GVYRKYSSLKYGCAAKVEPA 355
GV +KYS L G A + PA
Sbjct: 387 GVLKKYSKLGRGAVALISPA 406
>AT5G06150.1 | Symbols: CYC1BAT, CYCB1;2 | Cyclin family protein |
chr5:1859542-1861570 REVERSE LENGTH=445
Length = 445
Score = 254 bits (650), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 122/266 (45%), Positives = 180/266 (67%), Gaps = 1/266 (0%)
Query: 96 CDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXX 155
D+++ LA VEY+DD+Y FYK+ EK S YM Q ++NEKMRAIL+DWL+EVH K
Sbjct: 171 SDKDNHLAAVEYVDDMYSFYKEVEKESQPK-MYMHIQTEMNEKMRAILIDWLLEVHIKFE 229
Query: 156 XXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAY 215
VN+IDRFL+ + V +++LQLVG++A+LIA KYEE+ P V D + +TD AY
Sbjct: 230 LNLETLYLTVNIIDRFLSVKAVPKRELQLVGISALLIASKYEEIWPPQVNDLVYVTDNAY 289
Query: 216 TRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSFFLIELCLVECKML 275
+ ++L MEK ++ L++ L+VPT YVF+ RF+KA+ SD ++E + FL EL ++ L
Sbjct: 290 SSRQILVMEKAILGNLEWYLTVPTQYVFLVRFIKASMSDPEMENMVHFLAELGMMHYDTL 349
Query: 276 KFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSGKLT 335
F PS+LAA+A+YTA+CSL + WT T +++TGY+E ++++CS+L+ H + G +L
Sbjct: 350 TFCPSMLAASAVYTARCSLNKSPAWTDTLQFHTGYTESEIMDCSKLLAFLHSRCGESRLR 409
Query: 336 GVYRKYSSLKYGCAAKVEPAHFVLDG 361
VY+KYS + G A V PA +L
Sbjct: 410 AVYKKYSKAENGGVAMVSPAKSLLSA 435
>AT4G37490.1 | Symbols: CYC1, CYCB1;1, CYCB1 | CYCLIN B1;1 |
chr4:17622129-17624208 REVERSE LENGTH=428
Length = 428
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 121/273 (44%), Positives = 178/273 (65%), Gaps = 7/273 (2%)
Query: 95 ACDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKX 154
+ D + LA VEY++DIY FYK E S YM SQ DINEKMR IL++WLI+VH +
Sbjct: 153 SADVENDLAAVEYVEDIYSFYKSVE-SEWRPRDYMASQPDINEKMRLILVEWLIDVHVRF 211
Query: 155 XXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKA 214
VN++DRFL+ + V RK+LQLVG++A+L++ KYEE+ P VED + I D A
Sbjct: 212 ELNPETFYLTVNILDRFLSVKPVPRKELQLVGLSALLMSAKYEEIWPPQVEDLVDIADHA 271
Query: 215 YTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSFFLIELCLVECK- 273
Y+ ++L MEK +++TL++ L+VPT YVF+ RF+KA+ +D+K+E + +L EL ++
Sbjct: 272 YSHKQILVMEKTILSTLEWYLTVPTHYVFLARFIKASIADEKMENMVHYLAELGVMHYDT 331
Query: 274 MLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTY---HQKAG 330
M+ FSPS++AA+AIY A+ SL Q WT T + +TGYSE QL++C++L+ Q+ G
Sbjct: 332 MIMFSPSMVAASAIYAARSSLRQVPIWTSTLKHHTGYSETQLMDCAKLLAYQQWKQQEEG 391
Query: 331 SGKLT--GVYRKYSSLKYGCAAKVEPAHFVLDG 361
S T + +KYS + A + PA +L G
Sbjct: 392 SESSTKGALRKKYSKDERFAVALIPPAKALLTG 424
>AT2G26760.1 | Symbols: CYCB1;4 | Cyclin B1;4 |
chr2:11401551-11403205 FORWARD LENGTH=387
Length = 387
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/250 (44%), Positives = 171/250 (68%), Gaps = 3/250 (1%)
Query: 95 ACDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKX 154
A D N+ LA VEY++DI+ FY+ E+ + Y+ SQ +INEKMR+IL+DWL++VH K
Sbjct: 118 AVDANNELAAVEYVEDIFKFYRTVEEEGGIKD-YIGSQPEINEKMRSILIDWLVDVHRKF 176
Query: 155 XXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKA 214
+NL+DRFL+ V R++LQL+G+ AMLIACKYEE+ P V DF+ I+D A
Sbjct: 177 ELMPETLYLTINLVDRFLSLTMVHRRELQLLGLGAMLIACKYEEIWAPEVNDFVCISDNA 236
Query: 215 YTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYS-DKKLELLSFFLIELCLVECK 273
Y R +VL MEK ++ +++ ++VPTPYVF+ R++KAA D ++E L F+L EL L++
Sbjct: 237 YNRKQVLAMEKSILGQVEWYITVPTPYVFLARYVKAAVPCDAEMEKLVFYLAELGLMQYP 296
Query: 274 MLKFS-PSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSG 332
++ + PS+LAA+A+Y A+ L + WT+T + +TGYSE++++E +++++ A
Sbjct: 297 IVVLNRPSMLAASAVYAARQILKKTPFWTETLKHHTGYSEDEIMEHAKMLMKLRDSASES 356
Query: 333 KLTGVYRKYS 342
KL V++KYS
Sbjct: 357 KLIAVFKKYS 366
>AT1G16330.1 | Symbols: CYCB3;1 | cyclin b3;1 | chr1:5582387-5587391
REVERSE LENGTH=648
Length = 648
Score = 220 bits (560), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 108/248 (43%), Positives = 166/248 (66%), Gaps = 6/248 (2%)
Query: 97 DRNDPLAVVEYIDDIYCFYKKTEKSSCVSPA---YMTSQFDINEKMRAILMDWLIEVHYK 153
D ++ L V EY+DDIY FY E ++PA Y+++ +++ R IL++WLIEVH+K
Sbjct: 385 DESNQLEVAEYVDDIYQFYWTAE---ALNPALGHYLSAHAEVSPVTRGILINWLIEVHFK 441
Query: 154 XXXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDK 213
++L+DR+L+ + + ++QL+G+TA+L+A KYE+ P ++D I I+ +
Sbjct: 442 FDLMHETLYLTMDLLDRYLSQVPIHKNEMQLIGLTALLLASKYEDYWHPRIKDLISISAE 501
Query: 214 AYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLSFFLIELCLVECK 273
+YTR ++L ME+ M+ L+F L+ PTPYVFM RFLKAA S+KKLE L+F+LIELCLVE +
Sbjct: 502 SYTREQILGMERSMLKQLKFRLNAPTPYVFMLRFLKAAQSNKKLEQLAFYLIELCLVEYE 561
Query: 274 MLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSGK 333
LK+ PSLL A+AIY A+C+L+ WT +T Y+ Q+ +CS +++ +H+ A +G
Sbjct: 562 ALKYKPSLLCASAIYVARCTLHMTPVWTSLLNNHTHYNVSQMKDCSDMILRFHKAAKTGN 621
Query: 334 LTGVYRKY 341
L Y KY
Sbjct: 622 LRVTYEKY 629
>AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 |
chr1:29081904-29084137 REVERSE LENGTH=442
Length = 442
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/358 (33%), Positives = 182/358 (50%), Gaps = 21/358 (5%)
Query: 12 RSINQNIMDKDKPCIPNKVS-----------LSGNQNLLASTPSNQLDSAIIDNGEYEDA 60
R+ N I+D P PN S L + +LL S+P+ LD++ + + +
Sbjct: 75 RNWNLGILDSGLPPKPNAKSNIIVPYEDTELLQSDDSLLCSSPALSLDASPT---QSDPS 131
Query: 61 VPVFVKHTEAMLXXXXXXXXXXXXXXXXXXXXXXACDRNDPLAVVEYIDDIYCFYKKTEK 120
+ T ++ D DP + DIY + +E
Sbjct: 132 ISTHDSLTNHVVDYMVESTTDDGNDDDDDEIVNIDSDLMDPQLCASFACDIYEHLRVSEV 191
Query: 121 SSCVSPAYM-TSQFDINEKMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIR 179
+ + YM +Q IN MR+IL+DWL+EV + VN +DR+L + +
Sbjct: 192 NKRPALDYMERTQSSINASMRSILIDWLVEVAEEYRLSPETLYLAVNYVDRYLTGNAINK 251
Query: 180 KKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRNEVLNMEKLMVNTLQFNLSVPT 239
+ LQL+GVT M+IA KYEEV VP VEDF ITD Y RNE+L ME ++N L+F L+ PT
Sbjct: 252 QNLQLLGVTCMMIAAKYEEVCVPQVEDFCYITDNTYLRNELLEMESSVLNYLKFELTTPT 311
Query: 240 PYVFMRRFLKAAYSDKKL-----ELLSFFLIELCLVECKMLKFSPSLLAAAAIYTAQCSL 294
F+RRFL+AA K++ E L+ +L EL L++ ML+++PSL+AA+A++ AQ +L
Sbjct: 312 AKCFLRRFLRAAQGRKEVPSLLSECLACYLTELSLLDYAMLRYAPSLVAASAVFLAQYTL 371
Query: 295 Y-QFKQWTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSGKLTGVYRKYSSLKYGCAAK 351
+ K W T E YT Y + + C + ++ + S + + +KYS KY AAK
Sbjct: 372 HPSRKPWNATLEHYTSYRAKHMEACVKNLLQLCNEKLSSDVVAIRKKYSQHKYKFAAK 429
>AT5G25380.1 | Symbols: CYCA2;1 | cyclin a2;1 | chr5:8815230-8817566
FORWARD LENGTH=437
Length = 437
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/258 (39%), Positives = 142/258 (55%), Gaps = 7/258 (2%)
Query: 100 DPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTS-QFDINEKMRAILMDWLIEVHYKXXXXX 158
DP Y IY E S +YM Q DI+ MR IL+DWL+EV +
Sbjct: 166 DPQFCSLYAASIYDSINVAELEQRPSTSYMVQVQRDIDPTMRGILIDWLVEVSEEYKLVS 225
Query: 159 XXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRN 218
VNLIDRF++ + ++KLQL+G+T MLIA KYEE+S P +E+F ITD YTR
Sbjct: 226 DTLYLTVNLIDRFMSHNYIEKQKLQLLGITCMLIASKYEEISAPRLEEFCFITDNTYTRL 285
Query: 219 EVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAY-SDK----KLELLSFFLIELCLVECK 273
EVL+ME ++N+L F LSVPT F+RRF++AA SDK ++E L+ + EL L E
Sbjct: 286 EVLSMEIKVLNSLHFRLSVPTTKTFLRRFIRAAQASDKVPLIEMEYLANYFAELTLTEYT 345
Query: 274 MLKFSPSLLAAAAIYTAQCSLYQFKQ-WTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSG 332
L+F PSL+AA+A++ A+ +L Q W +T + YT Y L M
Sbjct: 346 FLRFLPSLIAASAVFLARWTLDQSNHPWNQTLQHYTRYETSALKNTVLAMEELQLNTSGS 405
Query: 333 KLTGVYRKYSSLKYGCAA 350
L ++ KY+ K+ A
Sbjct: 406 TLIAIHTKYNQQKFKRVA 423
>AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 |
chr1:16775035-16777182 REVERSE LENGTH=460
Length = 460
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 143/262 (54%), Gaps = 7/262 (2%)
Query: 97 DRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTS-QFDINEKMRAILMDWLIEVHYKXX 155
+ DP + DIY + +E YM Q D+N MR IL+DWLIEV +
Sbjct: 184 NNGDPQLCATFACDIYKHLRASEAKKRPDVDYMERVQKDVNSSMRGILVDWLIEVSEEYR 243
Query: 156 XXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAY 215
VN IDR+L+ + R+KLQL+GV M+IA KYEE+ P VE+F ITD Y
Sbjct: 244 LVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAAKYEEICAPQVEEFCYITDNTY 303
Query: 216 TRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDK-----KLELLSFFLIELCLV 270
++EVL+ME ++N L+F ++ PT F+RRF++AA+ +LE ++ ++ EL L+
Sbjct: 304 LKDEVLDMESDVLNYLKFEMTAPTTKCFLRRFVRAAHGVHEAPLMQLECMANYIAELSLL 363
Query: 271 ECKMLKFSPSLLAAAAIYTAQCSLYQFKQ-WTKTSEWYTGYSEEQLLECSRLMVTYHQKA 329
E ML SPSL+AA+AI+ A+ L ++ W T + YT Y +L C + + A
Sbjct: 364 EYTMLSHSPSLVAASAIFLAKYILDPTRRPWNSTLQHYTQYKAMELRGCVKDLQRLCSTA 423
Query: 330 GSGKLTGVYRKYSSLKYGCAAK 351
L V KYS KY AK
Sbjct: 424 HGSTLPAVREKYSQHKYKFVAK 445
>AT5G11300.1 | Symbols: CYC3B, CYC2BAT, CYCA2;2 | mitotic-like
cyclin 3B from Arabidopsis | chr5:3601811-3604466
REVERSE LENGTH=436
Length = 436
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 106/260 (40%), Positives = 138/260 (53%), Gaps = 7/260 (2%)
Query: 100 DPLAVVEYIDDIYCFYKKTEKSSCVSPAYMT-SQFDINEKMRAILMDWLIEVHYKXXXXX 158
DP Y DIY E YM Q DI+ MR IL+DWL+EV
Sbjct: 165 DPQCCSLYAADIYDNIHVAELQQRPLANYMELVQRDIDPDMRKILIDWLVEVSDDYKLVP 224
Query: 159 XXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTRN 218
VNLIDRFL+ + R++LQL+GV+ MLIA KYEE+S P VE+F IT YTR
Sbjct: 225 DTLYLTVNLIDRFLSNSYIERQRLQLLGVSCMLIASKYEELSAPGVEEFCFITANTYTRP 284
Query: 219 EVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKK-----LELLSFFLIELCLVECK 273
EVL+ME ++N + F LSVPT F+RRF+KAA + K LE L+ +L EL LVE
Sbjct: 285 EVLSMEIQILNFVHFRLSVPTTKTFLRRFIKAAQASYKVPFIELEYLANYLAELTLVEYS 344
Query: 274 MLKFSPSLLAAAAIYTAQCSLYQFKQ-WTKTSEWYTGYSEEQLLECSRLMVTYHQKAGSG 332
L+F PSL+AA+A++ A+ +L Q W T + YT Y +L M
Sbjct: 345 FLRFLPSLIAASAVFLARWTLDQTDHPWNPTLQHYTRYEVAELKNTVLAMEDLQLNTSGC 404
Query: 333 KLTGVYRKYSSLKYGCAAKV 352
L KY+ K+ AK+
Sbjct: 405 TLAATREKYNQPKFKSVAKL 424
>AT1G47210.2 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
3;2 | chr1:17301036-17302584 FORWARD LENGTH=372
Length = 372
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/262 (38%), Positives = 145/262 (55%), Gaps = 11/262 (4%)
Query: 99 NDPLAVVEYIDDIYCFYKKTE--KSSCVSPAYMTS-QFDINEKMRAILMDWLIEVHYKXX 155
+DP Y+ DIY + ++ E P Y+ Q D+ MR +L+DWL+EV +
Sbjct: 94 DDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLVEVAEEYK 153
Query: 156 XXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAY 215
V+ IDRFL+ +TV ++KLQLVGV+AMLIA KYEE+S P V+DF ITD +
Sbjct: 154 LGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEISPPKVDDFCYITDNTF 213
Query: 216 TRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKK-----LELLSFFLIELCLV 270
++ +V+ ME ++ LQF L PT FMRRF + A D K LE L +L EL ++
Sbjct: 214 SKQDVVKMEADILLALQFELGRPTINTFMRRFTRVAQDDFKVPHLQLEPLCCYLSELSIL 273
Query: 271 ECKMLKFSPSLLAAAAIYTAQCSLYQFKQ--WTKTSEWYTGYSEEQLLECSRLMVTYHQK 328
+ K +KF PSLLAA+A++ A+ + + KQ W + E YT Y L C ++ +
Sbjct: 274 DYKTVKFVPSLLAASAVFLARF-IIRPKQHPWNQMLEEYTKYKAADLQVCVGIIHDLYLS 332
Query: 329 AGSGKLTGVYRKYSSLKYGCAA 350
G L V KY K+ C A
Sbjct: 333 RRGGALQAVREKYKHHKFQCVA 354
>AT1G15570.1 | Symbols: CYCA2;3 | CYCLIN A2;3 | chr1:5363034-5365218
FORWARD LENGTH=450
Length = 450
Score = 161 bits (408), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 138/262 (52%), Gaps = 7/262 (2%)
Query: 96 CDRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTS-QFDINEKMRAILMDWLIEVHYKX 154
D DPL Y +I+ + +E P +M Q D+ + MR IL+DWL+EV +
Sbjct: 177 SDDKDPLLCCLYAPEIHYNLRVSELKRRPLPDFMERIQKDVTQSMRGILVDWLVEVSEEY 236
Query: 155 XXXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKA 214
V LID FL V R++LQL+G+T MLIA KYEE+S P +E+F ITD
Sbjct: 237 TLASDTLYLTVYLIDWFLHGNYVQRQQLQLLGITCMLIASKYEEISAPRIEEFCFITDNT 296
Query: 215 YTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDK-----KLELLSFFLIELCL 269
YTR++VL ME ++ F + PTP F+RRFL+AA + + ++E L+ +L EL L
Sbjct: 297 YTRDQVLEMENQVLKHFSFQIYTPTPKTFLRRFLRAAQASRLSPSLEVEFLASYLTELTL 356
Query: 270 VECKMLKFSPSLLAAAAIYTAQCSLYQFKQ-WTKTSEWYTGYSEEQLLECSRLMVTYHQK 328
++ LKF PS++AA+A++ A+ ++ Q W T E YT Y L +
Sbjct: 357 IDYHFLKFLPSVVAASAVFLAKWTMDQSNHPWNPTLEHYTTYKASDLKASVHALQDLQLN 416
Query: 329 AGSGKLTGVYRKYSSLKYGCAA 350
L+ + KY KY A
Sbjct: 417 TKGCPLSAIRMKYRQEKYKSVA 438
>AT1G80370.1 | Symbols: CYCA2;4 | Cyclin A2;4 |
chr1:30214694-30216861 FORWARD LENGTH=461
Length = 461
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/261 (37%), Positives = 136/261 (52%), Gaps = 7/261 (2%)
Query: 97 DRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYM-TSQFDINEKMRAILMDWLIEVHYKXX 155
D DPL Y DIY + E P +M +Q D+ E MR IL+DWL+EV +
Sbjct: 187 DDKDPLLCSLYAPDIYYNLRVAELKRRPFPDFMEKTQRDVTETMRGILVDWLVEVSEEYT 246
Query: 156 XXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAY 215
V LID FL V R++LQL+G+T MLIA KYEE+ P +E+F ITD Y
Sbjct: 247 LVPDTLYLTVYLIDWFLHGNYVERQRLQLLGITCMLIASKYEEIHAPRIEEFCFITDNTY 306
Query: 216 TRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAA---YSDKKLEL--LSFFLIELCLV 270
TR++VL ME ++ F + PT F+RRFL+AA + ++ LE+ L+ +L EL L+
Sbjct: 307 TRDQVLEMESQVLKHFSFQIYTPTSKTFLRRFLRAAQVSFPNQSLEMEFLANYLTELTLM 366
Query: 271 ECKMLKFSPSLLAAAAIYTAQCSLYQFKQ-WTKTSEWYTGYSEEQLLECSRLMVTYHQKA 329
+ LKF PS++AA+A++ A+ +L Q W T E YT Y L +
Sbjct: 367 DYPFLKFLPSIIAASAVFLAKWTLNQSSHPWNPTLEHYTTYKASDLKASVHALQDLQLNT 426
Query: 330 GSGKLTGVYRKYSSLKYGCAA 350
L + KY K+ A
Sbjct: 427 KGCSLNSIRMKYRQDKFKSVA 447
>AT5G43080.1 | Symbols: CYCA3;1 | Cyclin A3;1 |
chr5:17293227-17294789 FORWARD LENGTH=355
Length = 355
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 93/260 (35%), Positives = 143/260 (55%), Gaps = 9/260 (3%)
Query: 99 NDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTS-QFDINEKMRAILMDWLIEVHYKXXXX 157
+DP Y+ I+ + ++ E S Y+ Q D+ MR +L+DWL+EV +
Sbjct: 79 DDPQMCGPYVTSIFEYLRQLEVKSRPLVDYIEKIQKDVTSNMRGVLVDWLVEVAEEYKLL 138
Query: 158 XXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYTR 217
V+ IDRFL+ +TV +++LQL+GVT+MLIA KYEE++ P V+DF ITD YT+
Sbjct: 139 SDTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEITPPNVDDFCYITDNTYTK 198
Query: 218 NEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSD-----KKLELLSFFLIELCLVEC 272
E++ ME ++ LQF L PT F+RRF + A D ++E L +L EL +++
Sbjct: 199 QEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQEDFEMSHLQMEFLCSYLSELSMLDY 258
Query: 273 KMLKFSPSLLAAAAIYTAQCSLYQFKQ--WTKTSEWYTGYSEEQLLECSRLMVTYHQKAG 330
+ +KF PS +AA+A++ A+ + + KQ W E YT Y L EC ++ +
Sbjct: 259 QSVKFLPSTVAASAVFLARF-IIRPKQHPWNVMLEEYTRYKAGDLKECVAMIHDLYLSRK 317
Query: 331 SGKLTGVYRKYSSLKYGCAA 350
G L + KY K+ C A
Sbjct: 318 CGALEAIREKYKQHKFKCVA 337
>AT1G47230.1 | Symbols: CYCA3;4 | CYCLIN A3;4 |
chr1:17306752-17308587 FORWARD LENGTH=369
Length = 369
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 140/261 (53%), Gaps = 11/261 (4%)
Query: 100 DPLAVVEYIDDIYCFYKKTEKSSCVSPA--YMTS-QFDINEKMRAILMDWLIEVHYKXXX 156
DP + DI + ++ E P Y+ Q D+ MRA+L+DWL+EV +
Sbjct: 88 DPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKVQSDLTPHMRAVLVDWLVEVAEEYKL 147
Query: 157 XXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYT 216
++ +DRFL+ + + R+KLQLVGV+AMLIA KYEE+ P VEDF ITD +T
Sbjct: 148 VSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASKYEEIGPPKVEDFCYITDNTFT 207
Query: 217 RNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKK-----LELLSFFLIELCLVE 271
+ EV++ME ++ LQF L PT F+RRF + A D K +E L +L EL +++
Sbjct: 208 KQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKDSQLQIEFLCCYLSELSMLD 267
Query: 272 CKMLKFSPSLLAAAAIYTAQCSLYQFKQ--WTKTSEWYTGYSEEQLLECSRLMVTYHQKA 329
+K+ PSLL+A+A++ A+ + + KQ W + E YT Y L C ++ +
Sbjct: 268 YTCVKYLPSLLSASAVFLARF-IIRPKQHPWNQMLEEYTKYKAADLQVCVGIIHDLYLSR 326
Query: 330 GSGKLTGVYRKYSSLKYGCAA 350
L V KY KY C A
Sbjct: 327 RGNTLEAVRNKYKQHKYKCVA 347
>AT1G47230.2 | Symbols: CYCA3;4 | CYCLIN A3;4 |
chr1:17306752-17308587 FORWARD LENGTH=370
Length = 370
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 140/262 (53%), Gaps = 12/262 (4%)
Query: 100 DPLAVVEYIDDIYCFYKKTEKSSCVSPA--YMTS-QFDINEKMRAILMDWLIEVHYKXXX 156
DP + DI + ++ E P Y+ Q D+ MRA+L+DWL+EV +
Sbjct: 88 DPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKVQSDLTPHMRAVLVDWLVEVAEEYKL 147
Query: 157 XXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIAC-KYEEVSVPTVEDFILITDKAY 215
++ +DRFL+ + + R+KLQLVGV+AMLIA KYEE+ P VEDF ITD +
Sbjct: 148 VSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASRKYEEIGPPKVEDFCYITDNTF 207
Query: 216 TRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKK-----LELLSFFLIELCLV 270
T+ EV++ME ++ LQF L PT F+RRF + A D K +E L +L EL ++
Sbjct: 208 TKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKDSQLQIEFLCCYLSELSML 267
Query: 271 ECKMLKFSPSLLAAAAIYTAQCSLYQFKQ--WTKTSEWYTGYSEEQLLECSRLMVTYHQK 328
+ +K+ PSLL+A+A++ A+ + + KQ W + E YT Y L C ++ +
Sbjct: 268 DYTCVKYLPSLLSASAVFLARF-IIRPKQHPWNQMLEEYTKYKAADLQVCVGIIHDLYLS 326
Query: 329 AGSGKLTGVYRKYSSLKYGCAA 350
L V KY KY C A
Sbjct: 327 RRGNTLEAVRNKYKQHKYKCVA 348
>AT1G47220.1 | Symbols: CYCA3;3 | Cyclin A3;3 |
chr1:17303676-17305197 FORWARD LENGTH=327
Length = 327
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 135/263 (51%), Gaps = 9/263 (3%)
Query: 99 NDPLAVVEYIDDIYCFYKKTEKSSCVSPAY---MTSQFDINEKMRAILMDWLIEVHYKXX 155
+DP Y+ DIY + ++ E + P + Q DI R +L+DWL+EV +
Sbjct: 48 DDPQMCGLYVSDIYEYLRELEVKPKLRPLHDYIEKIQEDITPSKRGVLVDWLVEVAEEFE 107
Query: 156 XXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAY 215
V+ IDRFL+ + V LQLVGV+AM IA KYEE P VEDF IT Y
Sbjct: 108 LVSETLYLTVSYIDRFLSLKMVNEHWLQLVGVSAMFIASKYEEKRRPKVEDFCYITANTY 167
Query: 216 TRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKK-----LELLSFFLIELCLV 270
T+ +VL ME+ ++ L+F L PT F+RRF++ A D K LE L +L EL ++
Sbjct: 168 TKQDVLKMEEDILLALEFELGRPTTNTFLRRFIRVAQEDFKVPNLQLEPLCCYLSELSML 227
Query: 271 ECKMLKFSPSLLAAAAIYTAQCSLYQFKQ-WTKTSEWYTGYSEEQLLECSRLMVTYHQKA 329
+ +KF PSLLAA+A++ A+ + + W++ E T Y L C +M+ +
Sbjct: 228 DYSCVKFVPSLLAASAVFLARFIILPNQHPWSQMLEECTKYKAADLQVCVEIMLDLYLSR 287
Query: 330 GSGKLTGVYRKYSSLKYGCAAKV 352
G V KY K+ A +
Sbjct: 288 SEGASKAVREKYKQHKFQYVAAI 310
>AT1G34460.1 | Symbols: CYCB1;5, CYC3 | CYCLIN B1;5 |
chr1:12595110-12599628 FORWARD LENGTH=491
Length = 491
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 94/158 (59%), Gaps = 21/158 (13%)
Query: 97 DRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXXX 156
D+++ +A VEY+DD+Y FYK+ EK S YM Q ++NEKMRAIL+DWL+EVH K
Sbjct: 262 DKDNHVAAVEYVDDMYSFYKEVEKESQ-PKMYMHIQTEMNEKMRAILIDWLLEVHIKFEL 320
Query: 157 XXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYT 216
VN+IDRFL + V +++LQ V D + +TD AY+
Sbjct: 321 NLETLYLTVNIIDRFLYVKAVPKRELQ--------------------VNDLVYVTDNAYS 360
Query: 217 RNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSD 254
++L M+K ++ L++ L++PT YVF+ F+KA+ SD
Sbjct: 361 SRQILVMKKAILGNLEWYLTIPTQYVFLFCFIKASISD 398
>AT1G34460.2 | Symbols: CYCB1;5 | CYCLIN B1;5 |
chr1:12595110-12599354 FORWARD LENGTH=483
Length = 483
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 94/158 (59%), Gaps = 21/158 (13%)
Query: 97 DRNDPLAVVEYIDDIYCFYKKTEKSSCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXXX 156
D+++ +A VEY+DD+Y FYK+ EK S YM Q ++NEKMRAIL+DWL+EVH K
Sbjct: 259 DKDNHVAAVEYVDDMYSFYKEVEKESQ-PKMYMHIQTEMNEKMRAILIDWLLEVHIKFEL 317
Query: 157 XXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIACKYEEVSVPTVEDFILITDKAYT 216
VN+IDRFL + V +++LQ V D + +TD AY+
Sbjct: 318 NLETLYLTVNIIDRFLYVKAVPKRELQ--------------------VNDLVYVTDNAYS 357
Query: 217 RNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSD 254
++L M+K ++ L++ L++PT YVF+ F+KA+ SD
Sbjct: 358 SRQILVMKKAILGNLEWYLTIPTQYVFLFCFIKASISD 395
>AT1G47210.1 | Symbols: CYCA3;2 | cyclin-dependent protein kinase
3;2 | chr1:17301036-17301695 FORWARD LENGTH=192
Length = 192
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 99 NDPLAVVEYIDDIYCFYKKTEKSSCVSP--AYMTS-QFDINEKMRAILMDWLIEVHYKXX 155
+DP Y+ DIY + ++ E P Y+ Q D+ MR +L+DWL+EV +
Sbjct: 94 DDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLVEVAEEYK 153
Query: 156 XXXXXXXXXVNLIDRFLACQTVIRKKLQLVGVTAMLIAC 194
V+ IDRFL+ +TV ++KLQLVGV+AMLIA
Sbjct: 154 LGSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIAS 192
>AT1G70210.1 | Symbols: CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 |
chr1:26440015-26441980 FORWARD LENGTH=339
Length = 339
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 103/232 (44%), Gaps = 23/232 (9%)
Query: 109 DDIYCFYKKTEKSSCVSPAYMTSQF---DINEKMRAILMDWLIEVHYKXXXXXXXXXXXV 165
D I CF + E+ Y+ S+F ++ R + W+++V V
Sbjct: 50 DSIACFIED-ERHFVPGHDYL-SRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAV 107
Query: 166 NLIDRFLACQTVIRKK---LQLVGVTAMLIACKYEEVSVPTVEDFILITDK-AYTRNEVL 221
N +DRFL + + +QL+ V + +A K EE+ VP++ DF + K + +
Sbjct: 108 NYMDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIK 167
Query: 222 NMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYS-DKKLELLSFFL---IELCLV---ECKM 274
ME L+++ L + L TP+ F+ F AY D L FF+ E+ L E
Sbjct: 168 RMELLVLSVLDWRLRSVTPFDFISFF---AYKIDPSGTFLGFFISHATEIILSNIKEASF 224
Query: 275 LKFSPSLLAAAAIYTAQCSLYQFKQWTKTSE----WYTGYSEEQLLECSRLM 322
L++ PS +AAAAI L E W G S+E+++ C RLM
Sbjct: 225 LEYWPSSIAAAAILCVANELPSLSSVVNPHESPETWCDGLSKEKIVRCYRLM 276
>AT1G14750.1 | Symbols: SDS | Cyclin family protein |
chr1:5079674-5082423 REVERSE LENGTH=578
Length = 578
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 138 KMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKK-LQLVGVTAMLIACKY 196
++R+I++ W+++ V L+DRFL+ + ++ L LVG+ ++ +A +
Sbjct: 385 RLRSIMVQWIVKQCSDMGLQQETLFLGVGLLDRFLSKGSFKSERTLILVGIASLTLATRI 444
Query: 197 EEVSV--PTVEDFILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSD 254
EE + I + Y+R+EV+ ME L+ L F PT + F+ +LKAA ++
Sbjct: 445 EENQPYNSIRKRNFTIQNLRYSRHEVVAMEWLVQEVLNFKCFTPTIFNFLWFYLKAARAN 504
Query: 255 KKLELLSFFLIELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQ 314
++E + L L + L F PS +AAA + A + + + + + ++ +
Sbjct: 505 PEVERKAKSLAVTSLSDQTQLCFWPSTVAAALVVLACIEHNKISAYQRVIKVHVRTTDNE 564
Query: 315 LLEC 318
L EC
Sbjct: 565 LPEC 568
>AT1G14750.2 | Symbols: SDS | Cyclin family protein |
chr1:5079674-5082423 REVERSE LENGTH=410
Length = 410
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 138 KMRAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKK-LQLVGVTAMLIACKY 196
++R+I++ W+++ V L+DRFL+ + ++ L LVG+ ++ +A +
Sbjct: 217 RLRSIMVQWIVKQCSDMGLQQETLFLGVGLLDRFLSKGSFKSERTLILVGIASLTLATRI 276
Query: 197 EEVSV--PTVEDFILITDKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSD 254
EE + I + Y+R+EV+ ME L+ L F PT + F+ +LKAA ++
Sbjct: 277 EENQPYNSIRKRNFTIQNLRYSRHEVVAMEWLVQEVLNFKCFTPTIFNFLWFYLKAARAN 336
Query: 255 KKLELLSFFLIELCLVECKMLKFSPSLLAAAAIYTAQCSLYQFKQWTKTSEWYTGYSEEQ 314
++E + L L + L F PS +AAA + A + + + + + ++ +
Sbjct: 337 PEVERKAKSLAVTSLSDQTQLCFWPSTVAAALVVLACIEHNKISAYQRVIKVHVRTTDNE 396
Query: 315 LLEC 318
L EC
Sbjct: 397 LPEC 400
>AT4G34160.1 | Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 |
chr4:16357903-16359304 FORWARD LENGTH=376
Length = 376
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 89/189 (47%), Gaps = 17/189 (8%)
Query: 109 DDIYCFYKKTEKS--SCVSPAYMTSQFDINEKMRAILMDWLIEVHYKXXXXXXXXXXXVN 166
+D+ + K E+ SC+ Y+++ R + W++ V+ +
Sbjct: 61 EDLVTLFSKEEEQGLSCLDDVYLSTD-------RKEAVGWILRVNAHYGFSTLAAVLAIT 113
Query: 167 LIDRFLACQTVIRKK---LQLVGVTAMLIACKYEEVSVPTVEDF-ILITDKAYTRNEVLN 222
+D+F+ ++ R K LQLV V + +A K EE VP + DF + T + +
Sbjct: 114 YLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQR 173
Query: 223 MEKLMVNTLQFNLSVPTPYVFMRRFLK--AAYSDKKLELLS--FFLIELCLVECKMLKFS 278
ME L+++TL++ + + TP F+ ++ ++ + L+ L+ + + + + +
Sbjct: 174 MELLILSTLEWKMHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLLSVISDSRFVGYL 233
Query: 279 PSLLAAAAI 287
PS++AAA +
Sbjct: 234 PSVVAAATM 242
>AT3G50070.1 | Symbols: CYCD3;3 | CYCLIN D3;3 |
chr3:18565322-18566669 REVERSE LENGTH=361
Length = 361
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 70/160 (43%), Gaps = 10/160 (6%)
Query: 140 RAILMDWLIEVHYKXXXXXXXXXXXVNLIDRFLACQTVIRKK---LQLVGVTAMLIACKY 196
R +DW+ +V VN DRF+ + K QL + + +A K
Sbjct: 86 REKALDWIFKVKSHYGFNSLTALLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKV 145
Query: 197 EEVSVPTVEDFILITDK-AYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDK 255
EE+ VP + DF + + + + ME L+++TL + + TP F ++ YS K
Sbjct: 146 EEIRVPFLLDFQVEEARYVFEAKTIQRMELLVLSTLDWRMHPVTPISFFDHIIR-RYSFK 204
Query: 256 KLELLSFF-----LIELCLVECKMLKFSPSLLAAAAIYTA 290
L F L+ + + + L FSPS+LA A + +
Sbjct: 205 SHHQLEFLSRCESLLLSIIPDSRFLSFSPSVLATAIMVSV 244
>AT5G02110.1 | Symbols: CYCD7;1, CYCD7 | CYCLIN D7;1 |
chr5:417087-418553 FORWARD LENGTH=341
Length = 341
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 6/149 (4%)
Query: 146 WLIEVHYKXXXXXXXXXXXVNLIDRFL---ACQTVIRKKLQLVGVTAMLIACKYEEVSVP 202
WLI+ + N DRF+ C ++LV VT++ IA K+ EV+ P
Sbjct: 84 WLIQTRSRLNLSYETVFSAANCFDRFVYMTCCDEWTNWMVELVAVTSLSIASKFNEVTTP 143
Query: 203 TVEDFILIT-DKAYTRNEVLNMEKLMVNTLQFNLSVPTPYVFMRRFLKAAYSDKKLELLS 261
+E+ + + N V ME +++ L++ ++ T Y F + + +++
Sbjct: 144 LLEELEMEGLTHMFHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKIGMVGDHMIMN 203
Query: 262 FFLIELCLVEC--KMLKFSPSLLAAAAIY 288
L V C KML++ PS++A AAI+
Sbjct: 204 RITNHLLDVICDLKMLQYPPSVVATAAIW 232