Miyakogusa Predicted Gene

Lj1g3v3329860.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3329860.1 Non Chatacterized Hit- tr|I1KJF2|I1KJF2_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,91.32,0,ZF_RING_2,Zinc finger, RING-type; seg,NULL; no
description,WD40/YVTN repeat-like-containing domain; ,CUFF.30442.1
         (966 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G05170.1 | Symbols: ATVPS11, VPS11 | vacuolar protein sorting...  1479   0.0  

>AT2G05170.1 | Symbols: ATVPS11, VPS11 | vacuolar protein sorting 11
           | chr2:1870020-1873278 FORWARD LENGTH=932
          Length = 932

 Score = 1479 bits (3829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 712/950 (74%), Positives = 799/950 (84%), Gaps = 22/950 (2%)

Query: 1   MYQWRKFEFFEDKYAAKCVVPXXXXXXXXXXXXXXXXXXCCSSGRGKVVTGFDDGTVCLF 60
           MYQ RKF+FFE+KY  K  +P                  CCSSGRGKVV G +DG+V   
Sbjct: 1   MYQLRKFDFFEEKYGGK--IPEDVTGDIQ----------CCSSGRGKVVIGSNDGSVSFL 48

Query: 61  DRGLKFNYAFQPHSSSVLFLQQLKQRNFLVTIGEDEQLTPQNSALCLKVFDLDKMQSESS 120
           DRG+KF+  FQ HSSSVLFLQ LKQRNFLVT+GEDEQ++PQ S +CLKVFDLDK+Q E +
Sbjct: 49  DRGVKFDSGFQAHSSSVLFLQHLKQRNFLVTVGEDEQISPQQSGMCLKVFDLDKVQEEGT 108

Query: 121 STASPDCVGILRIFTNQFPEAQITSFLVLEEVPPILLIAIGLDNGAIYCIKGDIARERIT 180
           S+++P+C+GILRIFTNQFPEA+ITSFLVLEEVPPILLIAIGLDNG IYC+KGDIARERIT
Sbjct: 109 SSSAPECIGILRIFTNQFPEAKITSFLVLEEVPPILLIAIGLDNGCIYCVKGDIARERIT 168

Query: 181 RFKLQVENHSDKTLSSITGLGFKVDGQSLQLFAVTPSSVSLFSLHDQPPRRQTLDQIGCG 240
           RFKLQV+  S     +ITGLGF++DGQ+L LFAVTP SV+LFS+  QPP+ QTLD IG  
Sbjct: 169 RFKLQVDGRS-----AITGLGFRMDGQALLLFAVTPESVNLFSMQAQPPKLQTLDHIGGS 223

Query: 241 LNSVAMSDRSELIIGRPEAVYFYEVDGRGPCWAFEGEKKLLGWFRGYLLCVIVDQRTGKH 300
           +N+V MSDRSELI+GRPEAVYFYEVDGRGPCWAFEGEKK +GWFRGYLLCVI D +TG  
Sbjct: 224 VNTVTMSDRSELIVGRPEAVYFYEVDGRGPCWAFEGEKKFMGWFRGYLLCVIDDSKTGNT 283

Query: 301 TFNIYDLKNRLIAHSVLVKEVSHMLYEWGNIILIMTDKSALCIGEKDMESKLDMLFKKNL 360
            FN+YDL+NRLIA+S++V +VS+ML EWGNIILI  DKS LCI EKDMESKLDMLFKKNL
Sbjct: 284 VFNVYDLRNRLIAYSIVVDKVSNMLCEWGNIILIKADKSLLCITEKDMESKLDMLFKKNL 343

Query: 361 YTVAINIVXXXXXXXXXXXEVLRKYGDHLYSKQDYDEAMAQYIHTIGHLEPSYVIQKFLD 420
           YTVAIN+V            V+RKYGDHLY KQD+DEAM QYI+TIG+LEPS+VIQKFLD
Sbjct: 344 YTVAINLVQSQHADAAATANVMRKYGDHLYGKQDFDEAMLQYINTIGYLEPSFVIQKFLD 403

Query: 421 AQRIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNLFIKSEDSIGELKFDVET 480
           AQRIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLN FI+ ED IGELKFDVET
Sbjct: 404 AQRIYNLTNYLEKLHEKGLASKDHTTLLLNCYTKLKDVEKLNTFIRKEDGIGELKFDVET 463

Query: 481 AIRVCRAANYHEHAMYVAKKAGRHEWYLKILLEDLGRYEEALGYISGLESSQAGMTIKEY 540
           AIRVCRAANYHEHAMYVAKKAG+HEWYLKILLEDLG Y+EAL Y+S LE SQAG+TI++Y
Sbjct: 464 AIRVCRAANYHEHAMYVAKKAGKHEWYLKILLEDLGNYDEALQYVSSLEPSQAGVTIEQY 523

Query: 541 GKTLIEHMPVETIQILIRLCTEDGDKRPHSNGLYVSMLPSPVDFLSIFVHHPQSLMEFLE 600
           GK LIEH P ETI IL+RLCTE G      NG+++SMLPSPVDF+++FV HP SLM FLE
Sbjct: 524 GKILIEHKPKETIDILMRLCTEQG----IPNGVFLSMLPSPVDFITVFVQHPHSLMHFLE 579

Query: 601 KYTNKVKDSPAQVEINNTLLELYISNELNFPSISQVNEG-GGYLNGASSKSMNLRAQPNG 659
           +Y   V+DSPAQ EINNTLLELY+S +LNFPSIS    G    L   S  +   +A P  
Sbjct: 580 RYAEIVQDSPAQAEINNTLLELYLSRDLNFPSISLSENGLDKDLIDHSVAAAVSKADPEK 639

Query: 660 SLADDKSSEEEKVRFQRREKGLRMLKSAWPPETEHPLYDVDLAIILCEMNAFRDGLMYLY 719
               D     EK   +R++KGL +LK AWP + E PLYDVDLA+ILCEMN+F+DGL+YLY
Sbjct: 640 KTNADSKDAMEKDCTERQQKGLELLKMAWPSDLEQPLYDVDLAVILCEMNSFKDGLLYLY 699

Query: 720 EKMKLYKEVIACYMQSHDHEGLIACCKRLGDSVKGGDPSLWADLLKYFGELGEDCSKEVK 779
           EKMK YKEVIACYMQ+HDHEGLIACCKRLGDS KGGDPSLWADLLKYFGE+GEDC+KEVK
Sbjct: 700 EKMKFYKEVIACYMQNHDHEGLIACCKRLGDSSKGGDPSLWADLLKYFGEIGEDCTKEVK 759

Query: 780 EVLTYIERDDILPPIVVLQTLSRNPCLTLSVIKDYIARKLEQESKMIEEDRHAIEKYQED 839
           EVLTYIERDDILPPI+VLQTL++NPCLTLSVIKDYIARKLEQESK+IEEDR A+EKYQE 
Sbjct: 760 EVLTYIERDDILPPIIVLQTLAKNPCLTLSVIKDYIARKLEQESKIIEEDRRAVEKYQET 819

Query: 840 TLAMRKEIQDLRTNARIFQLSKCTACTFTLDLPAVHFMCMHSFHLRCLGDNEKECPECAP 899
           T  MRKEI+DLRTNARIFQLSKCTACTFTLD+PAVHFMCMHSFH RCLGDNEKECPECAP
Sbjct: 820 TKNMRKEIEDLRTNARIFQLSKCTACTFTLDIPAVHFMCMHSFHQRCLGDNEKECPECAP 879

Query: 900 EYRSVLEMKRNLEQNSKDQDRFFQQVKNSKDGFSVIAEYFGKGIISKTSD 949
           EYRSV+EMKR+LEQNSKDQD FFQQVK SKDGFSVIAEYFGKGIISKT D
Sbjct: 880 EYRSVMEMKRSLEQNSKDQDLFFQQVKGSKDGFSVIAEYFGKGIISKTRD 929