Miyakogusa Predicted Gene

Lj1g3v3329220.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3329220.1 Non Chatacterized Hit- tr|F6I3Q7|F6I3Q7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,80.95,0.000000000005, ,CUFF.30815.1
         (42 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G43180.3 | Symbols:  | Phosphoenolpyruvate carboxylase family...    73   4e-14
AT2G43180.1 | Symbols:  | Phosphoenolpyruvate carboxylase family...    73   4e-14

>AT2G43180.3 | Symbols:  | Phosphoenolpyruvate carboxylase family
           protein | chr2:17953719-17955774 REVERSE LENGTH=478
          Length = 478

 Score = 73.2 bits (178), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/42 (83%), Positives = 38/42 (90%)

Query: 1   MVPALGGVNLKQLLDDAAEEVGGKQLLDFNDRMGDRIQVFLE 42
           +VPALGGVNLKQL+DDAA+EVGGK LLDF D  GDRIQVFLE
Sbjct: 437 IVPALGGVNLKQLMDDAADEVGGKILLDFKDTAGDRIQVFLE 478


>AT2G43180.1 | Symbols:  | Phosphoenolpyruvate carboxylase family
           protein | chr2:17953719-17955774 REVERSE LENGTH=479
          Length = 479

 Score = 73.2 bits (178), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/42 (83%), Positives = 38/42 (90%)

Query: 1   MVPALGGVNLKQLLDDAAEEVGGKQLLDFNDRMGDRIQVFLE 42
           +VPALGGVNLKQL+DDAA+EVGGK LLDF D  GDRIQVFLE
Sbjct: 438 IVPALGGVNLKQLMDDAADEVGGKILLDFKDTAGDRIQVFLE 479