Miyakogusa Predicted Gene

Lj1g3v3329200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3329200.1 Non Chatacterized Hit- tr|C4IZU3|C4IZU3_MAIZE
Uncharacterized protein OS=Zea mays PE=4
SV=1,70.15,4e-19,CGI-141-RELATED/LIPASE CONTAINING PROTEIN,NULL;
seg,NULL; Got1,Vesicle transport protein, Got1/SFT2-,CUFF.30384.1
         (126 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G05785.2 | Symbols:  | Got1/Sft2-like vescicle transport prot...   129   4e-31
AT1G05785.1 | Symbols:  | Got1/Sft2-like vescicle transport prot...   129   4e-31
AT5G01430.2 | Symbols:  | Got1/Sft2-like vescicle transport prot...   100   3e-22
AT5G01430.1 | Symbols:  | Got1/Sft2-like vescicle transport prot...   100   3e-22
AT3G49420.1 | Symbols:  | Got1/Sft2-like vescicle transport prot...   100   3e-22
AT3G03180.1 | Symbols:  | Got1/Sft2-like vescicle transport prot...    89   8e-19

>AT1G05785.2 | Symbols:  | Got1/Sft2-like vescicle transport protein
           family | chr1:1730981-1732406 FORWARD LENGTH=135
          Length = 135

 Score =  129 bits (324), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 80/122 (65%)

Query: 1   MAFDIDEIKKXXXXXXXXXXXXXXXXXXXXXDRGLLALGNIFWLAGVAILLGWRSMWGIF 60
           M ++I E KK                     DRGLLALGN+FWL GV +LLGW+S W +F
Sbjct: 1   MVYEITEQKKVGLGLIGFGLSFTFLGVILYFDRGLLALGNLFWLIGVGLLLGWQSTWRVF 60

Query: 61  TNRANYKGSASFLLGLFFIFVRWPIVGIILEIYGCVFLFSDFWSSIKVFLYHIPVVGWII 120
           TN  N +G+  F+LGLF IFVRWPI+GIILEIYG + LF  FWS++K FL  IP VGWII
Sbjct: 61  TNVNNLRGTICFVLGLFLIFVRWPIIGIILEIYGVIVLFGGFWSTVKAFLSQIPFVGWII 120

Query: 121 RF 122
           ++
Sbjct: 121 QY 122


>AT1G05785.1 | Symbols:  | Got1/Sft2-like vescicle transport protein
           family | chr1:1730981-1732406 FORWARD LENGTH=135
          Length = 135

 Score =  129 bits (324), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 65/122 (53%), Positives = 80/122 (65%)

Query: 1   MAFDIDEIKKXXXXXXXXXXXXXXXXXXXXXDRGLLALGNIFWLAGVAILLGWRSMWGIF 60
           M ++I E KK                     DRGLLALGN+FWL GV +LLGW+S W +F
Sbjct: 1   MVYEITEQKKVGLGLIGFGLSFTFLGVILYFDRGLLALGNLFWLIGVGLLLGWQSTWRVF 60

Query: 61  TNRANYKGSASFLLGLFFIFVRWPIVGIILEIYGCVFLFSDFWSSIKVFLYHIPVVGWII 120
           TN  N +G+  F+LGLF IFVRWPI+GIILEIYG + LF  FWS++K FL  IP VGWII
Sbjct: 61  TNVNNLRGTICFVLGLFLIFVRWPIIGIILEIYGVIVLFGGFWSTVKAFLSQIPFVGWII 120

Query: 121 RF 122
           ++
Sbjct: 121 QY 122


>AT5G01430.2 | Symbols:  | Got1/Sft2-like vescicle transport protein
           family | chr5:176797-178010 REVERSE LENGTH=140
          Length = 140

 Score =  100 bits (248), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 75/121 (61%)

Query: 1   MAFDIDEIKKXXXXXXXXXXXXXXXXXXXXXDRGLLALGNIFWLAGVAILLGWRSMWGIF 60
           M+F++++ KK                     D+GLLA+GNI +++GV++ +G++S    F
Sbjct: 2   MSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQFF 61

Query: 61  TNRANYKGSASFLLGLFFIFVRWPIVGIILEIYGCVFLFSDFWSSIKVFLYHIPVVGWII 120
             R NYKG+ SF +G FF+ + WPI+G++LE YG   LFS FW ++ VF   IPV+GWII
Sbjct: 62  MKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWII 121

Query: 121 R 121
           +
Sbjct: 122 Q 122


>AT5G01430.1 | Symbols:  | Got1/Sft2-like vescicle transport protein
           family | chr5:176797-178010 REVERSE LENGTH=140
          Length = 140

 Score =  100 bits (248), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 75/121 (61%)

Query: 1   MAFDIDEIKKXXXXXXXXXXXXXXXXXXXXXDRGLLALGNIFWLAGVAILLGWRSMWGIF 60
           M+F++++ KK                     D+GLLA+GNI +++GV++ +G++S    F
Sbjct: 2   MSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQFF 61

Query: 61  TNRANYKGSASFLLGLFFIFVRWPIVGIILEIYGCVFLFSDFWSSIKVFLYHIPVVGWII 120
             R NYKG+ SF +G FF+ + WPI+G++LE YG   LFS FW ++ VF   IPV+GWII
Sbjct: 62  MKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWII 121

Query: 121 R 121
           +
Sbjct: 122 Q 122


>AT3G49420.1 | Symbols:  | Got1/Sft2-like vescicle transport protein
           family | chr3:18329855-18331070 FORWARD LENGTH=140
          Length = 140

 Score =  100 bits (248), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 75/121 (61%)

Query: 1   MAFDIDEIKKXXXXXXXXXXXXXXXXXXXXXDRGLLALGNIFWLAGVAILLGWRSMWGIF 60
           M+F++++ KK                     D+GLLA+GNI +++GV++ +G++S    F
Sbjct: 2   MSFEMNDRKKIGLGLTGFGVFFSFLGIVFVFDKGLLAMGNILFISGVSLTIGFKSTMQFF 61

Query: 61  TNRANYKGSASFLLGLFFIFVRWPIVGIILEIYGCVFLFSDFWSSIKVFLYHIPVVGWII 120
             R NYKG+ SF +G FF+ + WPI+G++LE YG   LFS FW ++ VF   IPV+GWII
Sbjct: 62  MKRQNYKGTISFGVGFFFVIIGWPILGMMLETYGFFVLFSGFWPTLAVFAQKIPVLGWII 121

Query: 121 R 121
           +
Sbjct: 122 Q 122


>AT3G03180.1 | Symbols:  | Got1/Sft2-like vescicle transport protein
           family | chr3:733531-734421 FORWARD LENGTH=140
          Length = 140

 Score = 89.0 bits (219), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 61/90 (67%)

Query: 32  DRGLLALGNIFWLAGVAILLGWRSMWGIFTNRANYKGSASFLLGLFFIFVRWPIVGIILE 91
           D+GL+A+GNI +LAGV + +G       FT R N+KG+ SF LG   +   WPI G++LE
Sbjct: 33  DKGLIAMGNILFLAGVTLTIGINPAIQFFTKRQNFKGTISFGLGFLLVVFGWPIFGLLLE 92

Query: 92  IYGCVFLFSDFWSSIKVFLYHIPVVGWIIR 121
            YG + LFS FW ++ VFL  IP++GW+++
Sbjct: 93  SYGFLVLFSGFWPTLAVFLQRIPLLGWLLQ 122