Miyakogusa Predicted Gene

Lj1g3v3329030.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3329030.3 tr|G7J520|G7J520_MEDTR Receptor protein
kinase-like protein OS=Medicago truncatula GN=MTR_3g088930
P,36.23,0.0000000000002, ,CUFF.30368.3
         (156 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G63410.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    69   2e-12
AT5G14210.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    60   4e-10
AT3G03770.2 | Symbols:  | Leucine-rich repeat protein kinase fam...    50   7e-07
AT3G03770.1 | Symbols:  | Leucine-rich repeat protein kinase fam...    50   7e-07

>AT5G63410.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr5:25395173-25397768 REVERSE LENGTH=680
          Length = 680

 Score = 68.6 bits (166), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/40 (67%), Positives = 33/40 (82%)

Query: 23  NWSERLTILVSIPNAIHFLHTGMIPGFFKNRLKTNNIFLS 62
           NWSERL +L  +  A+HFLHTG+IPGFF NRLKTNN+ L+
Sbjct: 506 NWSERLNVLTGVAKAVHFLHTGVIPGFFSNRLKTNNVLLN 545


>AT5G14210.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr5:4578503-4581374 REVERSE LENGTH=775
          Length = 775

 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 25/49 (51%), Positives = 33/49 (67%)

Query: 15  EMILARFFNWSERLTILVSIPNAIHFLHTGMIPGFFKNRLKTNNIFLSD 63
           E    +   W +RL IL+ I  A+HFLHTG++PG F N+LKTNNI L +
Sbjct: 585 ESFSEKILTWPDRLAILIEIAKAVHFLHTGVMPGSFNNQLKTNNILLDE 633


>AT3G03770.2 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr3:945303-948436 REVERSE LENGTH=802
          Length = 802

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 36/68 (52%)

Query: 18  LARFFNWSERLTILVSIPNAIHFLHTGMIPGFFKNRLKTNNIFLSDIGWQSSVTMDCPLS 77
           + R   W +R+++ + +   I FLHTG++PG + N LK  +I L +       + + PL 
Sbjct: 574 MGRLLTWEQRISVAIGVAKGIQFLHTGIVPGVYDNNLKMTDILLDNNLAAKLSSYNLPLL 633

Query: 78  QRKMMQVG 85
              + +VG
Sbjct: 634 VEGLGKVG 641


>AT3G03770.1 | Symbols:  | Leucine-rich repeat protein kinase family
           protein | chr3:945303-948436 REVERSE LENGTH=802
          Length = 802

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 36/68 (52%)

Query: 18  LARFFNWSERLTILVSIPNAIHFLHTGMIPGFFKNRLKTNNIFLSDIGWQSSVTMDCPLS 77
           + R   W +R+++ + +   I FLHTG++PG + N LK  +I L +       + + PL 
Sbjct: 574 MGRLLTWEQRISVAIGVAKGIQFLHTGIVPGVYDNNLKMTDILLDNNLAAKLSSYNLPLL 633

Query: 78  QRKMMQVG 85
              + +VG
Sbjct: 634 VEGLGKVG 641