Miyakogusa Predicted Gene

Lj1g3v3328940.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj1g3v3328940.1 Non Chatacterized Hit- tr|I1KZJ9|I1KZJ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.16782
PE,79.1,0,TRNASYNTHGLY,Glycyl-tRNA synthetase, alpha2 dimer; Class II
aaRS and biotin synthetases,NULL; Class ,CUFF.30355.1
         (722 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G29880.1 | Symbols:  | glycyl-tRNA synthetase / glycine--tRNA...  1078   0.0  
AT1G29870.1 | Symbols:  | tRNA synthetase class II (G, H, P and ...   555   e-158
AT3G44740.1 | Symbols:  | Class II aaRS and biotin synthetases s...   251   1e-66

>AT1G29880.1 | Symbols:  | glycyl-tRNA synthetase / glycine--tRNA
           ligase | chr1:10459662-10462781 REVERSE LENGTH=729
          Length = 729

 Score = 1078 bits (2787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 521/682 (76%), Positives = 590/682 (86%), Gaps = 4/682 (0%)

Query: 45  RKALADKQSAVDAQGNXXXXXXXXXXXXXXXXXXXXXXXXXKLEKSSIERSLQSILSVAD 104
           R++L++K S+V+AQGN                         KLEKS++E+ LQSI+S + 
Sbjct: 48  RQSLSEKSSSVEAQGNAVRALKASRAAKPEIDAAIEQLNKLKLEKSTVEKELQSIISSSG 107

Query: 105 ----TRESFRHAVTNTLERRFFYIPTAKIYGGVAGLYDYGPPGCDVKLNVLSFWRKHFVR 160
                RE+FR AV NTLERR FYIP+ KIY GVAGL+DYGPPGC +K NVLSFWR+HF+ 
Sbjct: 108 NGSLNREAFRKAVVNTLERRLFYIPSFKIYSGVAGLFDYGPPGCAIKSNVLSFWRQHFIL 167

Query: 161 EEQMLEMDCPCVTPEEVLKASGHVEKFTDLMVKDTKTNNCFRADHLLKDYCNEKLQKDLT 220
           EE MLE+DCPCVTPE VLKASGHV+KFTDLMVKD KT  C+RADHLLKDYC EKL+KDLT
Sbjct: 168 EENMLEVDCPCVTPEVVLKASGHVDKFTDLMVKDEKTGTCYRADHLLKDYCTEKLEKDLT 227

Query: 221 LSPEKVAELKNVLALLDDFSPEELGAKIKEYGITAPDTQNPLSDPYPFNLMFQTKIGPSG 280
           +S EK AELK+VLA+++DFSPE+LGAKI+EYGITAPDT+NPLSDPYPFNLMFQT IGPSG
Sbjct: 228 ISAEKAAELKDVLAVMEDFSPEQLGAKIREYGITAPDTKNPLSDPYPFNLMFQTSIGPSG 287

Query: 281 LQTGYLRPETAQGIFVNFRDLYYCNGNKLPFAAAQVGQAFRNEIAPRQGLLRVREFTLAE 340
           L  GY+RPETAQGIFVNF+DLYY NG KLPFAAAQ+GQAFRNEI+PRQGLLRVREFTLAE
Sbjct: 288 LIPGYMRPETAQGIFVNFKDLYYYNGKKLPFAAAQIGQAFRNEISPRQGLLRVREFTLAE 347

Query: 341 IEHFVDPEDKSHPKFAEVADLEFLMFPREEQVSGQSAKRIRLGEAVSKGIVNNETLGYFI 400
           IEHFVDPE+KSHPKF++VA LEFLMFPREEQ+SGQSAK++ LGEAV+KG VNNETLGYFI
Sbjct: 348 IEHFVDPENKSHPKFSDVAKLEFLMFPREEQMSGQSAKKLCLGEAVAKGTVNNETLGYFI 407

Query: 401 GRVYLFLTRLGIDKDRLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLR 460
           GRVYLFLTRLGIDK+RLRFRQHLANEMAHYAADCWDAEIE SYGWIECVGIADRSAYDLR
Sbjct: 408 GRVYLFLTRLGIDKERLRFRQHLANEMAHYAADCWDAEIESSYGWIECVGIADRSAYDLR 467

Query: 461 AHSEKSKVALVAQEKFLEPKEVEKLVITPSKKEIGLAFKGEQKKVLEALEAMREKEALDM 520
           AHS+KS   LVA+EKF EPKEVEKLVITP KKE+GLAFKG QK V+E+LEAM E+EA++M
Sbjct: 468 AHSDKSGTPLVAEEKFAEPKEVEKLVITPVKKELGLAFKGNQKNVVESLEAMNEEEAMEM 527

Query: 521 KAALESKGEVEFEVCQLKKTVTINKKMVTIQKEKKIEHQRVFTPSVIEPSFGIGRIIYCL 580
           KA LESKGEVEF VC LKK+V I K MV+I KEKK EHQRVFTPSVIEPSFGIGRIIYCL
Sbjct: 528 KATLESKGEVEFYVCTLKKSVNIKKNMVSISKEKKKEHQRVFTPSVIEPSFGIGRIIYCL 587

Query: 581 YEHSFYMRPSKAGDEELRVFRFPALVAPIKCTVFPLVQNQTFEAVSKLISKSLTAADVSH 640
           YEH F  RPSKAGDE+L +FRFP LVAPIKCTVFPLVQNQ FE V+K+ISK L +  +SH
Sbjct: 588 YEHCFSTRPSKAGDEQLNLFRFPPLVAPIKCTVFPLVQNQQFEEVAKVISKELASVGISH 647

Query: 641 KVDITGTSIGKRYARTDELGVPFAITVDSESSVTIRERDSKDQVRVDVEKAASVVKELTE 700
           K+DITGTSIGKRYARTDELGVPFAITVDS++SVTIRERDSKDQVRV +++AASVV  ++E
Sbjct: 648 KIDITGTSIGKRYARTDELGVPFAITVDSDTSVTIRERDSKDQVRVTLKEAASVVSSVSE 707

Query: 701 GQSTWADVWSNFPHHSSAAAED 722
           G+ TW DVW+ FPHHSSAAA++
Sbjct: 708 GKMTWQDVWATFPHHSSAAADE 729


>AT1G29870.1 | Symbols:  | tRNA synthetase class II (G, H, P and S)
           family protein | chr1:10456902-10458782 REVERSE
           LENGTH=463
          Length = 463

 Score =  555 bits (1430), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 286/427 (66%), Positives = 319/427 (74%), Gaps = 14/427 (3%)

Query: 86  KLEKSSIERSLQSILSVADTRESFRHAVTNTLERRFFYIPTAKIYGGVAGLYDYGPPGCD 145
           K EKS++E+           RE FR AV  TL+R  F   +  IY GVAGLYD+GP G  
Sbjct: 47  KPEKSAVEKD----------REDFREAVVKTLDRLLFVHKSFDIYHGVAGLYDFGPHGRT 96

Query: 146 VKLNVLSFWRKHFVREEQMLEMDCPCVTPEEVLKASGHVEKFTDLMVKDTKTNNCFRADH 205
           V+LN+LS WRK FV EE M+E+ C  +TPE V  ASGHV+KFTDLMVKD       RADH
Sbjct: 97  VELNILSLWRKCFVDEEDMMEVACTALTPEAVFNASGHVKKFTDLMVKDEVDGAFHRADH 156

Query: 206 LLKDYCNEKLQKDLTLSPEKVAELKNVLALLDDFSPEELGAKIKEYGITAPDTQNPLSDP 265
           L+K YC E  +KD T+S E  AEL  V+A ++D S EELG  +  +  TAP T+NPLS P
Sbjct: 157 LVKSYC-ENRKKDPTISAENAAELDKVIAHVEDLSAEELGG-VWNHCSTAPVTKNPLSHP 214

Query: 266 -YPFNLMFQTKIGPSGLQTGYLRPETAQGIFVNFRDLYYCNGNKLPFAAAQVGQAFRNEI 324
             PFNLMFQT  G SG   GYLRPETAQG F NF+D Y  NG KLPFA AQVG+ FRNEI
Sbjct: 215 PRPFNLMFQTSFGASGSLIGYLRPETAQGSFCNFKDYYNLNGRKLPFAVAQVGRVFRNEI 274

Query: 325 APRQGLLRVREFTLAEIEHFVDPEDKSHPKFAEVADLEFLMFPREEQVS-GQSAKRIRLG 383
           +PRQGLLR REFTLAEIEHFV PE KSH KF++VA LE LMFPREEQ   GQ AKR+ LG
Sbjct: 275 SPRQGLLRTREFTLAEIEHFVHPEHKSHSKFSDVAKLELLMFPREEQEKPGQFAKRLCLG 334

Query: 384 EAVSKGIVNNETLGYFIGRVYLFLTRLGIDKDRLRFRQHLANEMAHYAADCWDAEIECSY 443
           EAV+KG VN+ETLG+FIGRVYLFL RLGIDK+RLRFR HLANEMAHYA DCWDAEIECSY
Sbjct: 335 EAVAKGHVNSETLGFFIGRVYLFLIRLGIDKERLRFRHHLANEMAHYATDCWDAEIECSY 394

Query: 444 GWIECVGIADRSAYDLRAHSEKSKVALVAQEKFLEPKEVEKLVITPSKKEIGLAFKGEQK 503
           GWIECVGIADRS YDLRAHSEKS  ALVAQEK  EP EVEKL ITP  KE+G AFKG QK
Sbjct: 395 GWIECVGIADRSDYDLRAHSEKSGHALVAQEKLAEPIEVEKLAITPEMKELGPAFKGNQK 454

Query: 504 KVLEALE 510
            V+EALE
Sbjct: 455 NVVEALE 461


>AT3G44740.1 | Symbols:  | Class II aaRS and biotin synthetases
           superfamily protein | chr3:16296410-16297687 REVERSE
           LENGTH=244
          Length = 244

 Score =  251 bits (642), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 122/179 (68%), Positives = 140/179 (78%), Gaps = 7/179 (3%)

Query: 302 YYCNG------NKLPFAAAQVGQAFRNEIAPRQGLLRVREFTLAEIEHFVDPEDKSHPKF 355
           ++C G       ++          FRNEI+ RQGLLRV EFTLAEIEHFVDP +KSHPKF
Sbjct: 63  HFCEGLVLLQWEEISLCCCSNWSTFRNEISHRQGLLRVCEFTLAEIEHFVDPGNKSHPKF 122

Query: 356 AEVADLEFLMFPREEQVSGQSAKRIRLGEAVSKGIVNNETLGYFIGRVYLFLTRLGIDKD 415
           ++VA+ EFLMFPREEQ+SGQSAK++ LGE V+KG VN ET+GYFI RVYLFL RLG DK+
Sbjct: 123 SDVANFEFLMFPREEQMSGQSAKKLCLGEVVAKGTVNKETVGYFIARVYLFLVRLGTDKE 182

Query: 416 RLRFRQHLANEMAHYAADCWDAEIECSYGWIECVGIADRSAYDLRAHSEKSKVALVAQE 474
           +LRFRQH ANEMA YAADC DAE E SYGWIECVGIADRSA+DLRAHS   KVAL  +E
Sbjct: 183 QLRFRQHFANEMARYAADCLDAEFESSYGWIECVGIADRSAFDLRAHS-VGKVALWLRE 240